LR48_mrnaVigan09g030900
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
Homology
BLAST of LR48_mrnaVigan09g030900 vs. DB:Swiss
Match: GUN2_ARATH (Endoglucanase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g19940 PE=2 SV=1) HSP 1 Score: 671.003 bits (1730), Expect = 0.000e+0 Identity = 326/454 (71.81%), Postives = 388/454 (85.46%), Query Frame = 1 Query: 166 QKYATALKTSLQFFDVQKSGELVDNKIPWRGDSGLKDGSQAKLDLTKGMYDAGDHMKFGLPLAYTATVLSWAILEYGDQMDHVGQLDSAQDSLKWITDYLINAHPSADVLYIQVGDPVADHKCWERPEEMTEARPLTQVNASHPGSDIXXXXXXXXXXXSLVFKKSNSSYSSTLLKHAKQLFTFADKNRGYYSESIPEVQTYYNSTGYGDELLWAASWLYHATGDDSYLEFVTGQDGEDYAEWGSTSWFSWDNKHAGTQVLLARLSFFKAKGISNSYGSGLQSYKKTAEAVMCSLLPDSPTATENRTEDGLIWVTEWNSLQHPVASAFLAVIYSDYMLTSQTPNLKCDSDSFTPSDLRDFAKSQADYVLGKNPMGMSFLVGYGDKFPQFVHHRGASIPADAKTGCKDGFQWLDSSDPNPNVATGALVGGPFKNGTFIDSRNNFMQTEPSTYNSA 1527
+ YA ALK ++QFFD+QKSG+L +N+I WRGDSGLKDGS+A +DL+KG+YDAGDHMKFG P+A+TATVLSW+ILEYGDQM + LD A+DSLKW TD+LINAHPS +VLYIQVGDPV DHKCW+RPE MT R LT+++ PG+++AAETAAAMA+ASLVFK+S++ YSSTLLKHAKQLF FAD NRG YS +IPEVQ+YYNSTGYGDELLWAASWLYHAT D +YL+FV+ ++GE++ +GS SWFSWDNK GT +LL+RL+FFK KG+S S GLQ +K+TAEAVMC L+P SPTAT +RT+ GLIWV+EWN+LQHPV+SAFLA +YSDYMLTS L C SF PSDLR FA+SQADY+LGKNP MS+LVGYG+K+P+FVHHRGASIPADA TGCKDGF+WL+S +PNPNVA GALVGGPF N TFID+RNN MQ EPSTYNSA
Sbjct: 47 KNYANALKIAMQFFDIQKSGKLENNEISWRGDSGLKDGSEASIDLSKGLYDAGDHMKFGFPMAFTATVLSWSILEYGDQMASLNLLDHAKDSLKWTTDFLINAHPSPNVLYIQVGDPVTDHKCWDRPETMTRKRTLTKIDTKTPGTEVAAETAAAMAAASLVFKESDTKYSSTLLKHAKQLFDFADNNRGSYSVNIPEVQSYYNSTGYGDELLWAASWLYHATEDQTYLDFVS-ENGEEFGNFGSPSWFSWDNKLPGTHILLSRLTFFK-KGLSGS--KGLQGFKETAEAVMCGLIPSSPTATSSRTDGGLIWVSEWNALQHPVSSAFLATLYSDYMLTSGVKELSCSDQSFKPSDLRKFARSQADYMLGKNPEKMSYLVGYGEKYPEFVHHRGASIPADATTGCKDGFKWLNSDEPNPNVAYGALVGGPFLNDTFIDARNNSMQNEPSTYNSA 496
BLAST of LR48_mrnaVigan09g030900 vs. DB:Swiss
Match: GUN10_ARATH (Endoglucanase 10 OS=Arabidopsis thaliana OX=3702 GN=At1g75680 PE=2 SV=2) HSP 1 Score: 660.988 bits (1704), Expect = 0.000e+0 Identity = 336/497 (67.61%), Postives = 406/497 (81.69%), Query Frame = 1 Query: 40 WFIAFVVLAIVVGAIVFTVKKKFGHSGSDKXXXXXXXXX-XXDQKYATALKTSLQFFDVQKSGELVDNKIPWRGDSGLKDGSQAKLDLTKGMYDAGDHMKFGLPLAYTATVLSWAILEYGDQMDHVGQLDSAQDSLKWITDYLINAHPSADVLYIQVGDPVADHKCWERPEEMTEARPLTQVNASHPGSDIXXXXXXXXXXXSLVFKKSNSSYSSTLLKHAKQLFTFADKNRGYYSESIPEVQTYYNSTGYGDELLWAASWLYHATGDDSYLEFVTGQDGEDYAEWGSTSWFSWDNKHAGTQVLLARLSFFKAKGISNSYGSGLQSYKKTAEAVMCSLLPDSPTATENRTEDGLIWVTEWNSLQHPVASAFLAVIYSDYMLTSQTPNLKCDSDSFTPSDLRDFAKSQADYVLGKNPMGMSFLVGYGDKFPQFVHHRGASIPADAKTGCKDGFQWLDSSDPNPNVATGALVGGPFKNGTFIDSRNNFMQTEPSTYNSA 1527
WFIA +VLA V+ A+V+TVK + SG D P A+D+KYA ALK +LQFFD+QKSG+L +NKIPWRGDSGLKDGS+ LDL+KG+YDAGDH+KFG P+A+TATVLSW+ILEYGDQM+ V QLD A+DSL+WITDYLI AHPS +VLYIQVGDP DH CWERPE+M E RPLT+++ PG+++AAETAAAMASASLVFK S+ +YS+TLLKHAKQLF FAD RG YS +IPEVQ +YNSTGYGDELLWAASWLYHAT D +YL++V+ G+++A +G+ +WFSWDNK AGTQVLL+RL FFK K +S S GL +Y+ TA+AVMC LLP SPT+T +RT GLIWV+EWNS+Q V+SAFLA ++SDYMLTS+ + CD F ++LRDFAKSQADY+LGKNP+G SF+VGYGDK+PQFVHHRGASIPADA TGC DGF+W +S+ PNPN+A GALVGGPF N TF DSR N MQ EP+TYN+A
Sbjct: 13 WFIAIIVLASVILAVVYTVKLRTKKSGDDDGGGPVPGPPGAIDKKYADALKLALQFFDIQKSGKLENNKIPWRGDSGLKDGSEDNLDLSKGLYDAGDHIKFGFPMAFTATVLSWSILEYGDQMNAVNQLDPAKDSLRWITDYLIKAHPSDNVLYIQVGDPKVDHPCWERPEDMKEKRPLTKIDVDTPGTEVAAETAAAMASASLVFKDSDPTYSATLLKHAKQLFNFADTKRGSYSVNIPEVQKFYNSTGYGDELLWAASWLYHATEDKTYLDYVSNH-GKEFASFGNPTWFSWDNKLAGTQVLLSRLLFFK-KDLSGS--KGLGNYRNTAKAVMCGLLPKSPTSTASRTNGGLIWVSEWNSMQQSVSSAFLASLFSDYMLTSRIHKISCDGKIFKATELRDFAKSQADYMLGKNPLGTSFVVGYGDKYPQFVHHRGASIPADATTGCLDGFKWFNSTKPNPNIAYGALVGGPFFNETFTDSRENPMQNEPTTYNNA 505
BLAST of LR48_mrnaVigan09g030900 vs. DB:Swiss
Match: GUN24_ORYSJ (Endoglucanase 24 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0533900 PE=2 SV=1) HSP 1 Score: 630.558 bits (1625), Expect = 0.000e+0 Identity = 318/498 (63.86%), Postives = 395/498 (79.32%), Query Frame = 1 Query: 40 WFIAFVVLAIVVGAIVFTVKKKFGHSGSD---KXXXXXXXXXXXDQKYATALKTSLQFFDVQKSGELVDNKIPWRGDSGLKDGSQAKLDLTKGMYDAGDHMKFGLPLAYTATVLSWAILEYGDQMDHVGQLDSAQDSLKWITDYLINAHPSADVLYIQVGDPVADHKCWERPEEMTEARPLTQVNASHPGSDIXXXXXXXXXXXSLVFKKSNSSYSSTLLKHAKQLFTFADKNRGYYSESIPEVQTYYNSTGYGDELLWAASWLYHATGDDSYLEFVTGQDGEDYAEWGSTSWFSWDNKHAGTQVLLARLSFFKAKGISNSYGSGLQSYKKTAEAVMCSLLPDSPTATENRTEDGLIWVTEWNSLQHPVASAFLAVIYSDYMLTSQTPNLKCDSDSFTPSDLRDFAKSQADYVLGKNPMGMSFLVGYGDKFPQFVHHRGASIPADAKTGCKDGFQWLDSSDPNPNVATGALVGGPFKNGTFIDSRNNFMQTEPSTYNS 1524
W I +V ++V A V + KK GS K PVPGPPGA+D KY AL +LQFF VQK+G+L +N+IPWRGDS L DG A LDL+KGMYDAGDH+KF P+A+TATVLSW+ILEYGDQM QLD A D+L+WITD+L+NAHPS +V YIQVGDP DH CWERPE M+E RPLTQ+N PGSD+AAE AAAMASAS+VFK +++YS +LL+HA++LFTFAD +G S++ P++Q YYNSTGY DELLWAASWLYHATGD +YL +VT ++G+ +A+WG +WFSWD+K AGTQVLL+RL+FF +K SN+ GL+ Y+ TAEAV+C LLPDSP+AT +RT GL+W++ WNSLQH +AFLAV+YSDYMLTSQT ++C ++P+D+R+FA SQA+Y+LG NPM +S+LVGYG +PQ VHHRGASIPADAKTGCK GFQ+L S+ PNPNVA GALVGGPF+N TF+DSR+N +QTE STYNS
Sbjct: 11 WLIVALVASLVATAAVVAIMKKKVGGGSGRKLKPLPVPGPPGAIDSKYGDALGVALQFFQVQKAGKLENNQIPWRGDSALDDGKPAGLDLSKGMYDAGDHIKFSFPMAFTATVLSWSILEYGDQMSATKQLDPALDALRWITDFLVNAHPSDNVFYIQVGDPDLDHNCWERPETMSEKRPLTQINTKSPGSDVAAEAAAAMASASIVFKSRDTTYSDSLLQHAQKLFTFADTYKGLASDTYPKLQNYYNSTGYQDELLWAASWLYHATGDQTYLSYVTVENGKAFADWGRPTWFSWDDKLAGTQVLLSRLNFFGSKQTSNAENMGLKMYRDTAEAVICGLLPDSPSATASRTGGGLVWISGWNSLQHATNAAFLAVVYSDYMLTSQTAAVQCSGKYYSPTDIRNFAISQANYILGDNPMKLSYLVGYGSSYPQQVHHRGASIPADAKTGCK-GFQYLHSTSPNPNVAMGALVGGPFQNDTFVDSRDNAVQTESSTYNS 507
BLAST of LR48_mrnaVigan09g030900 vs. DB:Swiss
Match: GUN18_ORYSJ (Endoglucanase 18 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0715300 PE=2 SV=1) HSP 1 Score: 602.053 bits (1551), Expect = 0.000e+0 Identity = 296/455 (65.05%), Postives = 362/455 (79.56%), Query Frame = 1 Query: 163 DQKYATALKTSLQFFDVQKSGELVDNKIPWRGDSGLKDGSQAKLDLTKGMYDAGDHMKFGLPLAYTATVLSWAILEYGDQMDHVGQLDSAQDSLKWITDYLINAHPSADVLYIQVGDPVADHKCWERPEEMTEARPLTQVNASHPGSDIXXXXXXXXXXXSLVFKKSNSSYSSTLLKHAKQLFTFADKNRGYYSESIPEVQTYYNSTGYGDELLWAASWLYHATGDDSYLEFVTGQDGEDYAEWGSTSWFSWDNKHAGTQVLLARLSFFKAKGISNSYGSGLQSYKKTAEAVMCSLLPDSPTATENRTEDGLIWVTEWNSLQHPVASAFLAVIYSDYMLTSQTPNLKCDSDSFTPSDLRDFAKSQADYVLGKNPMGMSFLVGYGDKFPQFVHHRGASIPADAKTGCKDGFQWLDSSDPNPNVATGALVGGPFKNGTFIDSRNNFMQTEPSTYNSA 1527
D KYA AL +LQFF VQKSG+LV+N I WRGDS L DG +A +DL+KGMYDAGDHMKFG P+A+TAT+LSW++LEYGD M Q DSA D+L WI DYL+NAHPS DVLYIQVGDP ADHKCWERPE+M E RPLT++ PGSD+AAETAAAMA+ASLV+K N +YSS+LL H ++LF FADK+RG Y+ + PE+ +YNST Y DELLWAASWLYHATG+ SYL + TG++ +D+A+ G+ +FSWD+K AGT+VLL+R+SFF ++G + L YK+TA+AVMC LLPDS TA RTE GL++V EWNSLQHPVASAFLA +YSDYM +S L C F+P+DLR FAKSQADY+LG NPM +S+LVGYGD++P+ VHHRGASIP D TGC DG +WL++S PNPNVATGALVGGP+KN +F+D R+N MQ E +TYNSA
Sbjct: 47 DHKYADALAVALQFFQVQKSGKLVNNTIHWRGDSALDDGKEAGIDLSKGMYDAGDHMKFGFPMAFTATMLSWSVLEYGDAMRAADQRDSAIDALNWIMDYLVNAHPSDDVLYIQVGDPKADHKCWERPEKMKEKRPLTKITPKSPGSDVAAETAAAMAAASLVYKTINKTYSSSLLDHGERLFAFADKHRGSYTRTFPELSAFYNSTTYQDELLWAASWLYHATGNHSYLAYATGKN-KDFADLGNPRYFSWDDKRAGTEVLLSRVSFFASQGSDVAQDDVLGMYKQTADAVMCILLPDSETAA-FRTEGGLLYVAEWNSLQHPVASAFLAAVYSDYMQSSGKTELSCSGQGFSPADLRKFAKSQADYLLGSNPMKISYLVGYGDRYPEKVHHRGASIPEDVDTGC-DGHKWLETSKPNPNVATGALVGGPYKNDSFVDERDNVMQNEATTYNSA 498
BLAST of LR48_mrnaVigan09g030900 vs. DB:Swiss
Match: GUN6_ARATH (Endoglucanase 6 OS=Arabidopsis thaliana OX=3702 GN=At1g64390 PE=2 SV=2) HSP 1 Score: 408.297 bits (1048), Expect = 4.136e-135 Identity = 220/463 (47.52%), Postives = 304/463 (65.66%), Query Frame = 1 Query: 172 YATALKTSLQFFDVQKSGELVDN-KIPWRGDSGLKDGSQAKLDLTKGMYDAGDHMKFGLPLAYTATVLSWAILEYGDQMDHVGQLDSAQDSLKWITDYLINAHPSADVLYIQVGDPVADHKCWERPEEMTEARPLTQVNASHPGSDIXXXXXXXXXXXSLVFKKSNSSYSSTLLKHAKQLFTFADKNRGYYSESIPEVQTYYNS-TGYGDELLWAASWLYHATGDDSYLEFVTGQDGEDYAEWGSTSW----FSWDNKHAGTQVLLARLSFFKAKGISNSYGSGLQSYKKTAEAVMCSLLPDSPTATENRTEDGLIWVTEWNSLQHPVASAFLAVIYSDYMLTSQTPNLKCDSDSFTPSDLRDFAKSQADYVLGKNPMGMSFLVGYGDKFPQFVHHRGASIPA----DAKTGCKDGF-QWLDSSDPNPNVATGALVGGPFKNGTFIDSRNNFMQTEPSTYNSA 1527
Y AL SL FF+ Q+SG L N ++ WR SGL DG + ++L G YDAGD++KFGLP+A+T T+++W+++EYG+Q+ G+L ++ D++KW TDY I AHP +VLY +VGD DH CW+RPEEMT R +++ S+PGSD+A ETAAAMA+AS+VF++SN YS LL HA QLF FADK RG Y SI Q YY S +GY DELLWAA+WLY A+ + YL+++ G++G+ G T W F WD K+AG Q L+A+ F +G + + + Y++ A++ MCSLL S + +T GLI+ WN++Q +++FL +YSDY LTS NL+C + + PS L FAKSQ DY+LG NP S++VGYG+ FPQ VHHRG+SI + C+ G+ W +PN+ TGA+VGGP F D R+N+ QTEP+TYN+A
Sbjct: 26 YGQALSKSLLFFEAQRSGVLPRNQRVTWRSHSGLTDGKSSGVNLVGGYYDAGDNVKFGLPMAFTVTMMAWSVIEYGNQLQANGELGNSIDAIKWGTDYFIKAHPEPNVLYGEVGDGNTDHYCWQRPEEMTTDRKAYRIDPSNPGSDLAGETAAAMAAASIVFRRSNPVYSRLLLTHAYQLFDFADKYRGKYDSSITVAQKYYRSVSGYNDELLWAAAWLYQASNNQFYLDYL-GRNGD---AMGGTGWSMTEFGWDVKYAGVQTLVAK---FLMQGKAGRHAPVFRKYQEKADSFMCSLLGKSSRNIQ-KTPGGLIFRQRWNNMQFVTSASFLTTVYSDY-LTSSRSNLRCAAGNVAPSQLLSFAKSQVDYILGDNPRATSYMVGYGNNFPQRVHHRGSSIVSVKVDRTFVTCRGGYATWFSRKGSDPNLLTGAIVGGPDAYDNFADRRDNYEQTEPATYNNA 479
BLAST of LR48_mrnaVigan09g030900 vs. DB:Swiss
Match: GUN19_ARATH (Endoglucanase 19 OS=Arabidopsis thaliana OX=3702 GN=At4g11050 PE=2 SV=1) HSP 1 Score: 407.912 bits (1047), Expect = 7.866e-135 Identity = 224/463 (48.38%), Postives = 308/463 (66.52%), Query Frame = 1 Query: 172 YATALKTSLQFFDVQKSGELVDN-KIPWRGDSGLKDGSQAKLDLTKGMYDAGDHMKFGLPLAYTATVLSWAILEYGDQMDHVGQLDSAQDSLKWITDYLINAHPSADVLYIQVGDPVADHKCWERPEEMTEARPLTQVNASHPGSDIXXXXXXXXXXXSLVFKKSNSSYSSTLLKHAKQLFTFADKNRGYYSESIPEVQTYYNS-TGYGDELLWAASWLYHATGDDSYLEFVTGQDGEDYAEWGSTSW----FSWDNKHAGTQVLLARLSFFKAKGISNSYGSGLQSYKKTAEAVMCSLLPDSPTATENRTEDGLIWVTEWNSLQHPVASAFLAVIYSDYMLTSQTPNLKCDSDSFTPSDLRDFAKSQADYVLGKNPMGMSFLVGYGDKFPQFVHHRGASIPA---DAK-TGCKDGF-QWLDSSDPNPNVATGALVGGPFKNGTFIDSRNNFMQTEPSTYNSA 1527
Y AL S+ FF+ Q+SG L N ++ WR SGL DG + +DL G YDAGD++KFGLP+A+T T + W+I+EYG Q++ G+L A D++KW TDY I AHP +VLY +VGD +DH CW+RPEEMT R +++ ++PGSD+A ETAAAMA+AS+VF++S+ SYS+ LL+HA QLF FADK RG Y SI Q YY S +GY DELLWAA+WLY AT D YL+++ G++G+ G T W F WD K+AG Q L+A++ + KG + + + Y++ AE MCSLL S T +T GLI+ WN++Q +++FLA +YSDY+ S+ +L C + +PS L +F+KSQ DY+LG NP S++VGYG+ +P+ VHHRG+SI + D K C+ G+ W +PNV TGALVGGP F D R+N+ QTEP+TYN+A
Sbjct: 27 YKQALSKSILFFEAQRSGHLPPNQRVSWRSHSGLYDGKSSGVDLVGGYYDAGDNVKFGLPMAFTVTTMCWSIIEYGGQLESNGELGHAIDAVKWGTDYFIKAHPEPNVLYGEVGDGKSDHYCWQRPEEMTTDRRAYKIDRNNPGSDLAGETAAAMAAASIVFRRSDPSYSAELLRHAHQLFEFADKYRGKYDSSITVAQKYYRSVSGYNDELLWAAAWLYQATNDKYYLDYL-GKNGDSM---GGTGWSMTEFGWDVKYAGVQTLVAKV-LMQGKG--GEHTAVFERYQQKAEQFMCSLLGKS-TKNIKKTPGGLIFRQSWNNMQFVTSASFLATVYSDYLSYSKR-DLLCSQGNISPSQLLEFSKSQVDYILGDNPRATSYMVGYGENYPRQVHHRGSSIVSFNVDQKFVTCRGGYATWFSRKGSDPNVLTGALVGGPDAYDNFADQRDNYEQTEPATYNNA 480
BLAST of LR48_mrnaVigan09g030900 vs. DB:Swiss
Match: GUN11_ARATH (Endoglucanase 11 OS=Arabidopsis thaliana OX=3702 GN=At2g32990 PE=2 SV=1) HSP 1 Score: 399.053 bits (1024), Expect = 8.775e-133 Identity = 222/465 (47.74%), Postives = 303/465 (65.16%), Query Frame = 1 Query: 172 YATALKTSLQFFDVQKSGEL-VDNKIPWRGDSGLKDGSQAKLDLTKGMYDAGDHMKFGLPLAYTATVLSWAILEYGDQMDHVGQLDSAQDSLKWITDYLINAHPSADVLYIQVGDPVADHKCWERPEEMTEARPLTQVNASHPGSDIXXXXXXXXXXXSLVFKKSNSSYSSTLLKHAKQLFTFADKNRGYYSESIPEVQTYYNS-TGYGDELLWAASWLYHATGDDSYLEFVTGQDGEDYA-EWGSTSW----FSWDNKHAGTQVLLARLSFFKAKGISNSYGSGLQSYKKTAEAVMCSLLPDSPTATE-NRTEDGLIWVTEWNSLQHPVASAFLAVIYSDYMLTSQTPNLKCDSDSFTPSDLRDFAKSQADYVLGKNPMGMSFLVGYGDKFPQFVHHRGASIPADAK----TGCKDGF-QWLDSSDPNPNVATGALVGGPFKNGTFIDSRNNFMQTEPSTYNSA 1527
Y AL SL +F+ Q+SG L + ++ WR SGL DG + +DL G +DAGDH+KFGLP+A+T T+LSW+++EYGD + G+L A +++KW TDY I AH S +VL+ +VGD DH CW+RPE+MT +R +++ ++PGSDIA ETAAAMA+AS+VF+ +N YS LL HA+QLF F DK RG Y ES+ V++YY S +GY DELLW A+WLY AT ++ Y+ +V D A + G SW FSWD K AG Q LLA + + K +S LQ YK A+ +CS+L + T RT GL++V +WN++Q+ ++FL +YSD++ S T +L+C + TP ++ FAKSQ DY+LG NPM S+LVGYG K+P VHHRGASI + + GC G+ W S+PNP+V GALVGGP F D R N++QTE TYN+A
Sbjct: 40 YGEALSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYHDAGDHVKFGLPMAFTVTMLSWSVIEYGDSLASTGELSHALEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRRAFKIDENNPGSDIAGETAAAMAAASIVFRSTNPHYSHLLLHHAQQLFEFGDKYRGKYDESLKVVKSYYASVSGYMDELLWGATWLYRATDNEHYMSYVV-----DMAHQLGGLSWAMSEFSWDVKFAGVQ-LLASMLLKEEKHKQHS--KVLQQYKSKADHYLCSILNKNINGTNVQRTPAGLLYVRQWNNMQYVSTASFLLTVYSDHLRKSNT-DLECHEGTVTPDEMLGFAKSQIDYILGSNPMETSYLVGYGPKYPIRVHHRGASIASFKEHKGFIGCTQGYDNWYGRSEPNPSVLVGALVGGPDHQDDFDDRRGNYVQTEACTYNTA 495
BLAST of LR48_mrnaVigan09g030900 vs. DB:Swiss
Match: GUN15_ORYSJ (Endoglucanase 15 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0212300 PE=2 SV=1) HSP 1 Score: 398.282 bits (1022), Expect = 4.505e-131 Identity = 217/463 (46.87%), Postives = 298/463 (64.36%), Query Frame = 1 Query: 172 YATALKTSLQFFDVQKSGELVDN-KIPWRGDSGLKDGSQAKLDLTKGMYDAGDHMKFGLPLAYTATVLSWAILEYGDQMDHVGQLDSAQDSLKWITDYLINAHPSADVLYIQVGDPVADHKCWERPEEMTEARPLTQVNASHPGSDIXXXXXXXXXXXSLVFKKSNSSYSSTLLKHAKQLFTFADKNRGYYSESIPEVQTYYNS-TGYGDELLWAASWLYHATGDDSYLEFVTGQDGEDYAEWGSTSW----FSWDNKHAGTQVLLARLSFFKAKGISNSYGSGLQSYKKTAEAVMCSLLPDSPTATENRTEDGLIWVTEWNSLQHPVASAFLAVIYSDYMLTSQTPNLKCDSDSFTPSDLRDFAKSQADYVLGKNPMGMSFLVGYGDKFPQFVHHRGASIPADAK----TGCKDGF-QWLDSSDPNPNVATGALVGGPFKNGTFIDSRNNFMQTEPSTYNSA 1527
YA AL+ S+ +F Q+SG L N ++ WR SGL DG +DL G YDAGD++KFGLP+A+T T++SW+ILEYG QM G+L +A D++KW TDY I AHP DVLY +VGD DH CW+RPE+MT +R +V+ HPGSD+AAETAAAMA+AS+VF+ + Y++ LL H+KQLF FADK RG Y SI + YY S +GYGDELLWAA+WL+ AT D SYLE++ G +GE G T W F WD K+ G QVL A+ F +G + + + LQ Y++ AE +CS + RT G+++ WN+LQ +++FL +Y+D+ S + C + + P D+ F KSQ +Y+LG NP G S++VGYG +P+ VHHRGASI + + C++G+ W NPN+ GA+VGGP + F D R+N+ QTE +TYN+A
Sbjct: 35 YAMALRKSILYFQAQRSGVLPPNQRVSWRASSGLFDGKANGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSILEYGKQMAAAGELRNAMDAVKWGTDYFIKAHPEPDVLYGEVGDGDTDHSCWQRPEDMTTSRQAFRVDPQHPGSDLAAETAAAMAAASIVFRGTYPGYANLLLVHSKQLFEFADKYRGKYDASITVARNYYGSFSGYGDELLWAAAWLFEATEDRSYLEYLAG-NGE---ALGGTGWSINQFGWDVKYPGVQVLAAK---FLLQGRAGDHAAALQRYRQNAEFFVCSCVGKGAVNVA-RTPGGMMYHQRWNNLQFVTSASFLLTVYADFAAISGRGAVHCPAGAAQPFDILKFVKSQVNYILGDNPRGTSYMVGYGASYPRQVHHRGASIVSIKRDPSFVSCQEGYSSWYGREAGNPNLLDGAVVGGPDEYDDFADERDNYEQTEAATYNNA 489
BLAST of LR48_mrnaVigan09g030900 vs. DB:Swiss
Match: GUN21_ORYSJ (Endoglucanase 21 OS=Oryza sativa subsp. japonica OX=39947 GN=GLU9 PE=2 SV=1) HSP 1 Score: 388.267 bits (996), Expect = 1.932e-128 Identity = 212/466 (45.49%), Postives = 296/466 (63.52%), Query Frame = 1 Query: 172 YATALKTSLQFFDVQKSGEL-VDNKIPWRGDSGLKDGSQAKLDLTKGMYDAGDHMKFGLPLAYTATVLSWAILEYGDQMDHVGQLDSAQDSLKWITDYLINAHPSADVLYIQVGDPVADHKCWERPEEMTEARPLTQVNASHPGSDIXXXXXXXXXXXSLVFKKSNSSYSSTLLKHAKQLFTFADKNRGYYSESIPEVQTYYNS-TGYGDELLWAASWLYHATGDDSYLEFVTGQDGEDYAEWGSTSW----FSWDNKHAGTQVLLARLSFFKAKGISNSYGSGLQSYKKTAEAVMCSLLPDSPTATE--NRTEDGLIWVTEWNSLQHPVASAFLAVIYSDYMLTSQTPNLKCDSDSFTPSD-LRDFAKSQADYVLGKNPMGMSFLVGYGDKFPQFVHHRGASI---PADAK-TGCKDGF-QWLDSSDPNPNVATGALVGGPFKNGTFIDSRNNFMQTEPSTYNSA 1527
Y AL + L +F+ Q+SG L + ++ WRG SGL DG Q +DL G YDAGD++KFGLP+A+T T+LSWA E+ D++ G+ +++KW TDYL+ AH +AD L+ +VGD DH CW+RPE+MT +R +V+ +PGSD+A ETAAA+A+AS+VF++S YS LL+HA+QLF F D+ RG Y SI EV+ YY S +GYGDELLWAA WL+ ATG YL++ E G W FSWD K+AG Q+L A++ ++ + L+ Y+ AE +C+ L + A + NRT G+++V WN++Q+ +AFL +YS Y+ S ++C + D L A++QADYVLG NP G+S++VGYG +FP+ VHHRGAS+ AD + GC G+ +W NPNV GA+VGGP F DSR+N+MQTE TYN+A
Sbjct: 37 YKKALHSGLLYFEAQRSGHLPYNQRVRWRGHSGLADGLQQGVDLVGGYYDAGDNVKFGLPMAFTMTMLSWAAAEFWDEIAAAGERRHVLEAIKWGTDYLVKAHTAADELWAEVGDGDTDHYCWQRPEDMTTSRQAYKVDRDNPGSDVAGETAAALAAASIVFRRSKPRYSRLLLRHAEQLFDFGDRYRGKYDSSIGEVRAYYASVSGYGDELLWAALWLHRATGRRGYLDYAVAMAD----ELGGVGWAVTEFSWDVKYAGLQILAAKV-LMDGGDHPAAHAATLEQYRSKAEHYLCACLGKNAAAGDNVNRTAGGMLFVRRWNNMQYVTNAAFLLTVYSRYLRDSGGDTIRCSGGAMATGDELAAMARAQADYVLGDNPAGVSYMVGYGRRFPRRVHHRGASMVSHRADGRFVGCVQGYDRWFRRGGANPNVVAGAIVGGPDDRDRFRDSRDNYMQTEACTYNTA 497
BLAST of LR48_mrnaVigan09g030900 vs. DB:Swiss
Match: GUN5_ARATH (Endoglucanase 5 OS=Arabidopsis thaliana OX=3702 GN=At1g48930 PE=2 SV=1) HSP 1 Score: 387.882 bits (995), Expect = 5.343e-127 Identity = 219/462 (47.40%), Postives = 295/462 (63.85%), Query Frame = 1 Query: 172 YATALKTSLQFFDVQKSGEL-VDNKIPWRGDSGLKDGSQAKLDLTKGMYDAGDHMKFGLPLAYTATVLSWAILEYGDQMDHVGQLDSAQDSLKWITDYLINAHPSADVLYIQVGDPVADHKCWERPEEMTEARPLTQVNASHPGSDIXXXXXXXXXXXSLVFKKSNSSYSSTLLKHAKQLFTFADKNRGYYSESIPEVQTYYNSTGYGDELLWAASWLYHATGDDSYLEFVTGQDGEDYAEWGSTSW----FSWDNKHAGTQVLLARLSFFKAKGISNSYGSGLQSYKKTAEAVMCSLLPDSPTATENRTEDGLIWVTEWNSLQHPVASAFLAVIYSDYMLTSQTPNLKCDSDSFTPSDLRDFAKSQADYVLGKNPMGMSFLVGYGDKFPQFVHHRGASIPA----DAKTGCKDGF-QWLDSSDPNPNVATGALVGGPFKNGTFIDSRNNFMQTEPSTYNSA 1527
Y +AL + FF+ Q+SG+L ++ WRG SGLKDG + L G YDAGDH+KFGLP+A+ T+LSWA ++ ++ Q+ S++W TDY I AHP +VL+ QVGD +DH CWERPE+MT +R +++ HPGSD+A ETAAA+A+ASL FK NSSYS+ LL HAK+LF+FADK RG Y+ SIP + +Y S+GY DELLWAA+WL+ ATGD YL++ G G T W FSWDNK+AG Q+LL+++ GI Y S L+ Y+ A+ C+ L + T GL++V EWN+LQ+ A+A+L +YSDY L++ L C P L DFA+SQADY+LGKN GMS++VGYG K+P VHHRG+SIP+ + C GF W S +PNV GALVGGP +N + D R+N+ Q+EP+ +A
Sbjct: 31 YGSALDKTFLFFEAQRSGKLPAAQRVKWRGPSGLKDGLAQGVSLEGGYYDAGDHVKFGLPMAFAVTMLSWAAVDNRKELSSSNQMQQTLWSIRWGTDYFIKAHPQPNVLWGQVGDGESDHYCWERPEDMTTSRTAYKLDPYHPGSDLAGETAAALAAASLAFKPFNSSYSALLLSHAKELFSFADKYRGLYTNSIPNAKAFYMSSGYSDELLWAAAWLHRATGDQYYLKYAMDNSG----YMGGTGWGVKEFSWDNKYAGVQILLSKILLEGKGGI---YTSTLKQYQTKADYFACACLKKNGGYNIQTTPGGLMYVREWNNLQYASAAAYLLAVYSDY-LSAANAKLNCPDGLVQPQGLLDFARSQADYILGKNRQGMSYVVGYGPKYPIRVHHRGSSIPSIFAQRSSVSCVQGFDSWYRRSQGDPNVIYGALVGGPDENDNYSDDRSNYEQSEPTLSGTA 484 The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan09g030900 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >LR48_mrnaVigan09g030900_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g030900_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g030900; organism=Vigna angularis; type=mRNA; length=7155bpback to top protein sequence of LR48_mrnaVigan09g030900_Va_Jingnong6_v1.1 >LR48_mrnaVigan09g030900_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g030900_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g030900_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=529bpback to top mRNA from alignment at Chr_9-CM003379.1:3497303..3504457- Legend: polypeptidestart_codonexonCDSintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.>LR48_mrnaVigan09g030900_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g030900_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g030900; organism=Vigna angularis; type=mRNA; length=7155bp; location=Sequence derived from: Chr_9-CM003379.1:3497303..3504457- (Vigna angularisback to top Coding sequence (CDS) from alignment at Chr_9-CM003379.1:3497303..3504457- >LR48_mrnaVigan09g030900_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g030900_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g030900; organism=Vigna angularis; type=CDS; length=1590bp; location=Sequence derived from: Chr_9-CM003379.1:3497303..3504457- (Vigna angularisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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