Vfaba.Tiffany.R1.2g142040.1

Transcript Overview
NameVfaba.Tiffany.R1.2g142040.1
Unique NameVfaba.Tiffany.R1.2g142040.1_tif_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length597
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr2chromosomechr2:1122052043..1122054087 -Vicia faba cv. Tiffany genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
tifzwsR191Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifzwsR223Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifzwsR244Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifL283Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
catifL400Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
crtifL055Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cctifL0430Cajanus cajan Asha genome v1.0Cajanus cajan
cctifL0512Cajanus cajan Asha genome v1.0Cajanus cajan
crtifL331Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crtifL867Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvtifL359Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pstifL470Pisum sativum Cameor genome v1aPisum sativum
pstifL569Pisum sativum Cameor genome v1aPisum sativum
pvtifL789Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvfhR144Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuR309Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvuR332Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
antifL0329Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caitifL552Cicer arietinum ICC 4958 genome v2Cicer arietinum
antifL0379Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caitifL819Cicer arietinum ICC 4958 genome v2Cicer arietinum
antifL0737Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
tifvrvR257Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvrvR280Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvuaR255Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
tifvssR233Vicia sativa cv. Studenica genome v1.0Vicia sativa
tifvuaR273Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
tifvssR288Vicia sativa cv. Studenica genome v1.0Vicia sativa
cantifL220Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cantifL342Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cantifL541Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Psat05G0120200-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
evm.model.Chr09.1524Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Phvul.009G082300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-XM_004501373.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigun09g220400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Ca_15086.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
rna-KK1_032839Cajanus cajan Asha genome v1.0Cajanus cajan
rna-TanjilR_09857Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Cr_02903.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_01665Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-XM_014644389.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg55223.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.2g175640.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.2g142040Vfaba.Tiffany.R1.2g142040_tif_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.2g142040.1_tif_v1-exonVfaba.Tiffany.R1.2g142040.1_tif_v1-exon-chr2_tif_v1:1122052043..1122052307Vicia fabaexon
Vfaba.Tiffany.R1.2g142040.1_tif_v1-exonVfaba.Tiffany.R1.2g142040.1_tif_v1-exon-chr2_tif_v1:1122053547..1122053600Vicia fabaexon
Vfaba.Tiffany.R1.2g142040.1_tif_v1-exonVfaba.Tiffany.R1.2g142040.1_tif_v1-exon-chr2_tif_v1:1122053721..1122053749Vicia fabaexon
Vfaba.Tiffany.R1.2g142040.1_tif_v1-exonVfaba.Tiffany.R1.2g142040.1_tif_v1-exon-chr2_tif_v1:1122053839..1122054087Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.2g142040.1_tif_v1-cdsVfaba.Tiffany.R1.2g142040.1_tif_v1-cds-chr2_tif_v1:1122052043..1122052307Vicia fabaCDS
Vfaba.Tiffany.R1.2g142040.1_tif_v1-cdsVfaba.Tiffany.R1.2g142040.1_tif_v1-cds-chr2_tif_v1:1122053547..1122053600Vicia fabaCDS
Vfaba.Tiffany.R1.2g142040.1_tif_v1-cdsVfaba.Tiffany.R1.2g142040.1_tif_v1-cds-chr2_tif_v1:1122053721..1122053749Vicia fabaCDS
Vfaba.Tiffany.R1.2g142040.1_tif_v1-cdsVfaba.Tiffany.R1.2g142040.1_tif_v1-cds-chr2_tif_v1:1122053839..1122054087Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.2g142040.1_tif_v1Vfaba.Tiffany.R1.2g142040.1_tif_v1Vicia fabapolypeptide
Vfaba.Tiffany.R1.2g142040.1_tif_v1Vfaba.Tiffany.R1.2g142040.1_tif_v1-proteinVicia fabapolypeptide


Homology
BLAST of Vfaba.Tiffany.R1.2g142040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6N595|A0A2Z6N595_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_314760 PE=4 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 1.564e-100
Identity = 161/236 (68.22%), Postives = 174/236 (73.73%), Query Frame = 0
Query:    6 TDSETHNNISFHSRNPQSPFLIALPFFKLP-ISQ--PPEIRTSISKAVDHCSKLLLSLASQNPILNKLLSLSSHFHDTCFQIRLSNYRNR----------------------------------------RLVLTWFPNAPPAIVAPLSSVCDPYLNVFRGLIPPIGGLDLSPILAFLVLNAFTSTAAALPAELPITEQSKQGLETRLQPTDVTSSQNKWMRRLQGIGSKTSASAN 198
            TD+ET NNISFH  N QSPF++ALPF KLP IS   PP++ TSI  AVDH SKLL SLASQNPI+NKLLSLSS FH+TC+QIR SNYRNR                                        RLVLTWFPNAPPAIV+PLS+VCDPYLNVFRGLIPP+GGLDLSPILAFLVLNAFTSTA+ALPAELPITEQSKQGLE  LQ T VTSSQNKWMRRLQG GSKT+ SAN
Sbjct:    7 TDTETKNNISFHRGNSQSPFVVALPFLKLPTISNFSPPQLPTSIFNAVDHYSKLLQSLASQNPIINKLLSLSSQFHNTCYQIRCSNYRNRKLVNNYHNFAAVLPGDSVAGLVVANGLSNFLNLYNTLLVCRLVLTWFPNAPPAIVSPLSTVCDPYLNVFRGLIPPLGGLDLSPILAFLVLNAFTSTASALPAELPITEQSKQGLEASLQSTVVTSSQNKWMRRLQGTGSKTTTSAN 242          
BLAST of Vfaba.Tiffany.R1.2g142040.1 vs. UniProtKB/TrEMBL
Match: tr|G7J8F7|G7J8F7_MEDTR (YGGT family protein OS=Medicago truncatula OX=3880 GN=11442240 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 5.937e-96
Identity = 160/236 (67.80%), Postives = 169/236 (71.61%), Query Frame = 0
Query:    6 TDSETHNNISFHSRNPQSPFLIALPFFKLPISQ--PPEIRTSISKAVDHCSKLLLSLASQNPILNKLLSLSSHFHDTCFQIRLSNYRNRR----------------------------------------LVLTWFPNAPPAIVAPLSSVCDPYLNVFRGLIPPIGGLDLSPILAFLVLNAFTSTAAALPAELPITEQSKQGLETRL-QPTDVTSSQNKWMRRLQGIGSKTSASAN 198
            TD+ET  N+SF   N QS   +A PF K PIS   PP++ TSIS AVD+CSKLL SLASQNP LNKLLSLSS FHDTC QIR SNY N R                                        LVLTWFPNAPPAIVAPLS+VCDPYLNVFRGLIPP+GGLDLSPILAFLVLNAFTSTAAALPAELP+TEQSKQGLE RL QPTDVTSSQNKWMRRLQGIGSKTS SAN
Sbjct:   12 TDTETKKNVSFCWGNSQS--TLAFPFLKSPISNFSPPQLPTSISNAVDNCSKLLHSLASQNPFLNKLLSLSSQFHDTCVQIRCSNYSNSRWVSNHHNFAAVLPGDSVAGLVVANGLNNFLSLYNTLLVARLVLTWFPNAPPAIVAPLSTVCDPYLNVFRGLIPPLGGLDLSPILAFLVLNAFTSTAAALPAELPVTEQSKQGLEARLQQPTDVTSSQNKWMRRLQGIGSKTSTSAN 245          
BLAST of Vfaba.Tiffany.R1.2g142040.1 vs. UniProtKB/TrEMBL
Match: tr|B7FJ31|B7FJ31_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 7.309e-96
Identity = 160/236 (67.80%), Postives = 169/236 (71.61%), Query Frame = 0
Query:    6 TDSETHNNISFHSRNPQSPFLIALPFFKLPISQ--PPEIRTSISKAVDHCSKLLLSLASQNPILNKLLSLSSHFHDTCFQIRLSNYRNRR----------------------------------------LVLTWFPNAPPAIVAPLSSVCDPYLNVFRGLIPPIGGLDLSPILAFLVLNAFTSTAAALPAELPITEQSKQGLETRL-QPTDVTSSQNKWMRRLQGIGSKTSASAN 198
            TD+ET  N+SF   N QS   +A PF K PIS   PP++ TSIS AVD+CSKLL SLASQNP LNKLLSLSS FHDTC QIR SNY N R                                        LVLTWFPNAPPAIVAPLS+VCDPYLNVFRGLIPP+GGLDLSPILAFLVLNAFTSTAAALPAELP+TEQSKQGLE RL QPTDVTSSQNKWMRRLQGIGSKTS SAN
Sbjct:   12 TDTETKKNVSFCWGNSQS--TLAFPFLKSPISNFPPPQLPTSISNAVDNCSKLLHSLASQNPFLNKLLSLSSQFHDTCVQIRCSNYSNSRWVSNHHNFAAVLPGDSVAGLVVANGLNNFLSLYNTLLVARLVLTWFPNAPPAIVAPLSTVCDPYLNVFRGLIPPLGGLDLSPILAFLVLNAFTSTAAALPAELPVTEQSKQGLEARLQQPTDVTSSQNKWMRRLQGIGSKTSTSAN 245          
BLAST of Vfaba.Tiffany.R1.2g142040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YAY2|A0A1S2YAY2_CICAR (ylmG homolog protein 2, chloroplastic OS=Cicer arietinum OX=3827 GN=LOC101500659 PE=4 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 1.456e-87
Identity = 148/228 (64.91%), Postives = 160/228 (70.18%), Query Frame = 0
Query:   13 NISFHSRNPQSPFLIALPFFKLPISQ--PPEIRTSISKAVDHCSKLLLSLASQNPILNKLLSLSSHFHDTCFQIRLSNYRNRRL---------------------------------------VLTWFPNAPPAIVAPLSSVCDPYLNVFRGLIPPIGG-LDLSPILAFLVLNAFTSTAAALPAELPITEQSKQGLETRLQPTDVTSSQNKWMRRLQGIGSKTSASAN 198
            N+SFH  N QSP  +ALPF KLPIS   PP++  SIS A  H S LL SLASQNP LNKLLSLSS FH+TCFQIR SN+RNRRL                                       VLTWFPNAPPAIV PLS+VCDPYLN+FRGLIPP+GG LDLSPILAFLVLNAFTSTAAALPAELP+ EQSKQGLE RLQ TDVTSSQ KWMRR++ IGSKTS  AN
Sbjct:   17 NVSFHWGNAQSP--LALPFLKLPISNFSPPQLPASISNAAHHFSTLLHSLASQNPFLNKLLSLSSQFHNTCFQIRCSNFRNRRLLVNHNFAAVLPGDSVAGLVVANGLQNFLSLYNTLIIVRLVLTWFPNAPPAIVTPLSTVCDPYLNIFRGLIPPLGGTLDLSPILAFLVLNAFTSTAAALPAELPVAEQSKQGLEARLQSTDVTSSQKKWMRRIREIGSKTSTRAN 242          
BLAST of Vfaba.Tiffany.R1.2g142040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3MNT3|A0A2K3MNT3_TRIPR (YGGT family protein OS=Trifolium pratense OX=57577 GN=L195_g015582 PE=4 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 7.380e-86
Identity = 148/228 (64.91%), Postives = 160/228 (70.18%), Query Frame = 0
Query:    4 NGTDSETHNNISFH-SRNPQSPFLIALPFFKLPISQPPEIRTSISKAVDHCSKLLLSLASQNPILNKLLSLSSHFHDTCFQIR------------------------------------LSNYRNR-------RLVLTWFPNAPPAIVAPLSSVCDPYLNVFRGLIPPIGGLDLSPILAFLVLNAFTSTAAALPAELPITEQSKQGLETRLQPTDVTSSQNKWMRRLQ 187
            NGTD+ET NNISFH  RN QSPFL+ALP   +    PP++ TSIS AVDH S LL SLASQNPI+NKLLSLSS FH+TC+QIR                                    LSN+ N        RLVLTWFPNAPPAIV+PLS+VCDPYLNVFRGLIPP+GGLDLSPILAFLVLNAFTSTAAALPAELPI EQSKQGLE  LQ T VTSSQNKWMRRL 
Sbjct:    5 NGTDTETKNNISFHWGRNSQSPFLVALP--NISNFSPPQLPTSISNAVDHFSTLLQSLASQNPIINKLLSLSSQFHNTCYQIRCSNYRNRNRRLLNNNYHNFAAVLPGDSVAGLVVANGLSNFLNLYNTLLVCRLVLTWFPNAPPAIVSPLSTVCDPYLNVFRGLIPPLGGLDLSPILAFLVLNAFTSTAAALPAELPIPEQSKQGLEASLQSTVVTSSQNKWMRRLH 230          
BLAST of Vfaba.Tiffany.R1.2g142040.1 vs. UniProtKB/TrEMBL
Match: tr|V7AXC1|V7AXC1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G082300g PE=4 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 8.499e-68
Identity = 125/236 (52.97%), Postives = 149/236 (63.14%), Query Frame = 0
Query:    6 TDSETHNNISFHSRNPQSPFLIALPFFKLPISQ------PPEIRTSISKAVDHCSKLLLSLASQNPILNKLLSLSSHFHDTCFQIR------------------------------LSNYRN-------RRLVLTWFPNAPPAIVAPLSSVCDPYLNVFRGLIPPIGG-LDLSPILAFLVLNAFTSTAAALPAELPITEQSKQGLETRLQPTDVTSSQNKWMRRLQGIGSKTSASA 197
            T+ E    +S    NPQ PF  A+PF  LP S       PP++ TS + A DH   LL +LASQNP LNK++SL S FH  C QIR                              +SN+ N        RLVLTWFPNAPP+IV+PLS++CDPYLN+FRGLIPP+GG LDLSPILAFLVLNAFTSTAAA+PAELP TEQS+QGL T LQ ++ ++SQ KWMRRL G  S+TS  A
Sbjct:   11 TEIEKTKKVSHCWGNPQIPF--AIPFLTLPNSNFTTFLSPPQLHTSFTTAADHFFTLLHTLASQNPFLNKIISLQSQFHTLCVQIRKHGSVRSVGNHNFAAVLPGDSVAGLVVANGVSNFLNIYNTLLIVRLVLTWFPNAPPSIVSPLSTICDPYLNIFRGLIPPLGGTLDLSPILAFLVLNAFTSTAAAIPAELPTTEQSQQGLATPLQASNFSTSQKKWMRRLLGNKSRTSGGA 244          
BLAST of Vfaba.Tiffany.R1.2g142040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RBV2|A0A0S3RBV2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G065700 PE=4 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.145e-64
Identity = 125/247 (50.61%), Postives = 149/247 (60.32%), Query Frame = 0
Query:    1 MAVNGTD------SETHNNISFHSRNPQSPFLIALPFFKLPISQ------PPEIRTSISKAVDHCSKLLLSLASQNPILNKLLSLSSHFHDTCFQIR------------------------------LSNYRN-------RRLVLTWFPNAPPAIVAPLSSVCDPYLNVFRGLIPPIGG-LDLSPILAFLVLNAFTSTAAALPAELPITEQSKQGLETRLQPTDVTSSQNKWMRRLQGIGSKTSASA 197
            M  N T+       +T   +S    N Q PF  ALPF  LP S       PP++ TS++   DH   LL SLASQN  LNK++SL S FH  C QIR                              + N+ N        RLVLTWFPN PP+IV+PLS++CDPYLN+FRGLIPP+GG LDLSPILAFLVLNAFTSTAAALPAELP TE+S+QGL   LQ ++VT+SQNKWMRRL G  S+T+  A
Sbjct:    1 MGANNTNDSTTEIEKTQKKLSHCWGNAQIPF--ALPFLTLPNSNFATFLSPPQLHTSLTAVADHFFTLLHSLASQNTFLNKIISLPSQFHTLCIQIRKQDSVRLMSNHNFAAVLPGDSVAGLVVANGILNFLNIYNTLLIVRLVLTWFPNTPPSIVSPLSTICDPYLNIFRGLIPPLGGTLDLSPILAFLVLNAFTSTAAALPAELPSTERSQQGLAPPLQTSNVTTSQNKWMRRLLGNKSRTTGGA 245          
BLAST of Vfaba.Tiffany.R1.2g142040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3U1H5|A0A1S3U1H5_VIGRR (ylmG homolog protein 2, chloroplastic OS=Vigna radiata var. radiata OX=3916 GN=LOC106760941 PE=4 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.152e-63
Identity = 124/243 (51.03%), Postives = 147/243 (60.49%), Query Frame = 0
Query:    1 MAVNGTD------SETHNNISFHSRNPQSPFLIALPFFKLPISQ------PPEIRTSISKAVDHCSKLLLSLASQNPILNKLLSLSSHFHDTCFQIR------------------------------LSNYRN-------RRLVLTWFPNAPPAIVAPLSSVCDPYLNVFRGLIPPIGG-LDLSPILAFLVLNAFTSTAAALPAELPITEQSKQGLETRLQPTDVTSSQNKWMRRLQGIGSKT 193
            M  N T+       +T   +S    N Q PF  ALPF  LP S       PP++ +S +   DH   LL SLASQNP LNK++SL S FH  C QIR                              + N+ N        RLVLTWFPN PP+IV+PLS++CDPYLN+FRGLIPP+GG LDLSPILAFLVLNAFTSTAAALPAELP TE+S+QGL   LQ ++VT+SQNKWMRRL G  S+T
Sbjct:    1 MGANNTNDSTTEIEKTQKKVSHCWGNAQIPF--ALPFLTLPNSNLATFLSPPQLHSSFTAVADHFFTLLHSLASQNPFLNKIISLPSQFHTLCVQIRKQDSVRLVGNHNFAAVLPGDSVAGLVVANGVLNFLNIYNTLLIVRLVLTWFPNTPPSIVSPLSTICDPYLNIFRGLIPPLGGTLDLSPILAFLVLNAFTSTAAALPAELPTTERSQQGLAPPLQASNVTTSQNKWMRRLLGNKSRT 241          
BLAST of Vfaba.Tiffany.R1.2g142040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6NR73|A0A4D6NR73_VIGUN (YggT family protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g3367 PE=4 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.658e-63
Identity = 128/248 (51.61%), Postives = 150/248 (60.48%), Query Frame = 0
Query:    1 MAVNGTD------SETHNNISFHSRNPQSPFLIALPFFKLPISQ------PPEIRTSISKAVDHCSKLLLSLASQNPILNKLLSLSSHFHDTCFQIR------------------------------LSNYRN-------RRLVLTWFPNAPPAIVAPLSSVCDPYLNVFRGLIPPIGG-LDLSPILAFLVLNAFTSTAAALPAELPITEQSKQGLETRLQPTDV-TSSQNKWMRRLQGIGSKTSASA 197
            M  N T+       +T   +S    N Q PF  ALPF  LP S       PP++ TS + A DH   LL SLASQNP LNK++SL S FH  C QIR                              + N+ N        RLVLTWFPN PP+IV+PLS++CDPYLN+FRGLIPP+GG LDLSPILAFLVLNAFTSTAAALPAELP TE+S+QGL   LQP++V TSSQ KWMRRL G  S+T  +A
Sbjct:   15 MGANNTNDSSTEIEKTQKKVSHCWGNAQIPF--ALPFLTLPNSNFATFLSPPQLHTSFTAAADHFLTLLHSLASQNPFLNKIISLPSQFHTLCVQIRKQDSVRLVGNHNFAAVLPGDSVAGLVVANGVLNFLNIYNTLLIVRLVLTWFPNTPPSIVSPLSTICDPYLNIFRGLIPPLGGTLDLSPILAFLVLNAFTSTAAALPAELPPTERSQQGLAPPLQPSNVTTSSQKKWMRRLLGNKSRTPGAA 260          
BLAST of Vfaba.Tiffany.R1.2g142040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4P1QWR4|A0A4P1QWR4_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_09857 PE=4 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 6.830e-60
Identity = 118/222 (53.15%), Postives = 135/222 (60.81%), Query Frame = 0
Query:   20 NPQSPFLIALPFFKLPISQPPEIRTSISKAVDHCSKLLLSLASQNPILNKLLSLSSHFHDTCFQIRLSNYRNR----------------------------------------RLVLTWFPNAPPAIVAPLSSVCDPYLNVFRGLIPPIGG-LDLSPILAFLVLNAFTSTAAALPAELPITEQSKQGLETRLQPTDV--TSSQNKWMRRLQGIGSKTSASAN 198
            N Q+P  +ALPF  L    PP I T      D+  K L S AS+NP LNK+ SLSS FH  CFQIR SN   +                                        RLVLTWFPN PPAIV+PLS++CDPYLN+FRGLIPPIGG LDLSPILAFLVLNAFTSTAAALPAELP++EQS+QGL   LQ TD+  TS ++KWMRR+ G  S TS   N
Sbjct:   12 NAQTP--LALPFLNL---IPPPITT----VADNFLKSLNSFASENPFLNKIASLSSQFHTLCFQIRCSNSNRKMRLLSSHNFAAVLPGDSVAGLVVANGVQSFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTICDPYLNIFRGLIPPIGGTLDLSPILAFLVLNAFTSTAAALPAELPVSEQSEQGLAAPLQSTDIVTTSQKDKWMRRIHGNRSTTSGRVN 224          
BLAST of Vfaba.Tiffany.R1.2g142040.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9C595|YLMG2_ARATH (YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=YLMG2 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 2.882e-39
Identity = 82/185 (44.32%), Postives = 100/185 (54.05%), Query Frame = 0
Query:   41 EIRTSISKAVDHCSKLLLSLASQNPILNKLLSLSSHFHDTCFQIRLSNY-RNR---------------------------------------RLVLTWFPNAPPAIVAPLSSVCDPYLNVFRGLIPPIGGLDLSPILAFLVLNAFTSTAAALPAELPITEQSKQGLETRLQPTDVTSSQNKWMRR 185
            +   S+  A +     L SLAS+NP+  + + LSS FH  C +IRL N  R R                                       RLVLTWFP+APPAIV PLS++CDPYLN+FRG IPP+GGLDLSPILAFLVLNAFTS+A ALP ELP  + +              SS+ KW+RR
Sbjct:   60 DFHQSLISATEKFKGFLHSLASKNPLFQEAVRLSSEFHILCDEIRLRNTTRVRFAMSNHGFAAVLPGDSVAGLVVANGLINFLNIYNTILVVRLVLTWFPSAPPAIVNPLSTLCDPYLNIFRGFIPPLGGLDLSPILAFLVLNAFTSSAMALPCELPSADGA----------VSPASSETKWVRR 234          
BLAST of Vfaba.Tiffany.R1.2g142040.1 vs. Araport11
Match: AT5G21920.1 (| YGGT family protein | Chr5:7241350-7242765 REVERSE LENGTH=251 | 201606)

HSP 1 Score: 137.887 bits (346), Expect = 2.949e-40
Identity = 82/185 (44.32%), Postives = 100/185 (54.05%), Query Frame = 0
Query:   41 EIRTSISKAVDHCSKLLLSLASQNPILNKLLSLSSHFHDTCFQIRLSNY-RNR---------------------------------------RLVLTWFPNAPPAIVAPLSSVCDPYLNVFRGLIPPIGGLDLSPILAFLVLNAFTSTAAALPAELPITEQSKQGLETRLQPTDVTSSQNKWMRR 185
            +   S+  A +     L SLAS+NP+  + + LSS FH  C +IRL N  R R                                       RLVLTWFP+APPAIV PLS++CDPYLN+FRG IPP+GGLDLSPILAFLVLNAFTS+A ALP ELP  + +              SS+ KW+RR
Sbjct:   60 DFHQSLISATEKFKGFLHSLASKNPLFQEAVRLSSEFHILCDEIRLRNTTRVRFAMSNHGFAAVLPGDSVAGLVVANGLINFLNIYNTILVVRLVLTWFPSAPPAIVNPLSTLCDPYLNIFRGFIPPLGGLDLSPILAFLVLNAFTSSAMALPCELPSADGA----------VSPASSETKWVRR 234          
The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.2g142040.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A2Z6N595|A0A2Z6N595_TRISU1.564e-10068.22Uncharacterized protein OS=Trifolium subterraneum ... [more]
tr|G7J8F7|G7J8F7_MEDTR5.937e-9667.80YGGT family protein OS=Medicago truncatula OX=3880... [more]
tr|B7FJ31|B7FJ31_MEDTR7.309e-9667.80Uncharacterized protein OS=Medicago truncatula OX=... [more]
tr|A0A1S2YAY2|A0A1S2YAY2_CICAR1.456e-8764.91ylmG homolog protein 2, chloroplastic OS=Cicer ari... [more]
tr|A0A2K3MNT3|A0A2K3MNT3_TRIPR7.380e-8664.91YGGT family protein OS=Trifolium pratense OX=57577... [more]
tr|V7AXC1|V7AXC1_PHAVU8.499e-6852.97Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|A0A0S3RBV2|A0A0S3RBV2_PHAAN5.145e-6450.61Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A1S3U1H5|A0A1S3U1H5_VIGRR1.152e-6351.03ylmG homolog protein 2, chloroplastic OS=Vigna rad... [more]
tr|A0A4D6NR73|A0A4D6NR73_VIGUN1.658e-6351.61YggT family protein OS=Vigna unguiculata OX=3917 G... [more]
tr|A0A4P1QWR4|A0A4P1QWR4_LUPAN6.830e-6053.15Uncharacterized protein OS=Lupinus angustifolius O... [more]
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BLAST of Vfaba.Tiffany.R1.2g142040.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
sp|Q9C595|YLMG2_ARATH2.882e-3944.32YlmG homolog protein 2, chloroplastic OS=Arabidops... [more]
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BLAST of Vfaba.Tiffany.R1.2g142040.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G21920.12.949e-4044.32| YGGT family protein | Chr5:7241350-7242765 REVER... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003425CCB3/YggTPFAMPF02325YGGTcoord: 93..144
e-value: 3.9E-11
score: 43.2
IPR003425CCB3/YggTPANTHERPTHR33219YLMG HOMOLOG PROTEIN 2, CHLOROPLASTICcoord: 93..156

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Tiffany.R1.2g142040.1_tif_v1 ID=Vfaba.Tiffany.R1.2g142040.1_tif_v1; Name=Vfaba.Tiffany.R1.2g142040.1; organism=Vicia faba; type=mRNA; length=597bp
ATGGCTGTGAATGGTACCGACTCAGAAACTCATAACAACATTTCGTTTCA
TTCAAGAAACCCCCAATCACCATTTCTAATAGCACTCCCATTCTTCAAAC
TCCCAATTTCACAACCACCTGAAATCCGCACATCCATTTCCAAAGCAGTT
GATCATTGTTCCAAACTTCTCCTCTCCCTCGCCTCTCAAAACCCTATCTT
AAACAAATTACTCTCACTTTCCTCTCACTTCCACGATACATGCTTCCAGA
TTCGGCTCAGTAACTATAGGAACAGGAGGCTTGTTCTTACCTGGTTTCCC
AATGCTCCTCCTGCTATTGTTGCTCCTCTCAGCTCCGTATGTGACCCGTA
TCTGAACGTATTCCGGGGACTTATTCCTCCTATTGGAGGATTGGATCTCT
CTCCCATCCTAGCATTCCTTGTCCTGAATGCCTTCACTAGCACTGCTGCA
GCACTCCCTGCTGAGCTTCCAATCACAGAACAATCTAAACAAGGTCTTGA
AACAAGATTACAGCCTACCGATGTTACTTCTTCACAGAACAAATGGATGA
GACGGCTTCAAGGGATTGGGTCAAAGACCTCTGCTTCTGCAAACTAG
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protein sequence of Vfaba.Tiffany.R1.2g142040.1_tif_v1

>Vfaba.Tiffany.R1.2g142040.1_tif_v1 ID=Vfaba.Tiffany.R1.2g142040.1_tif_v1; Name=Vfaba.Tiffany.R1.2g142040.1_tif_v1; organism=Vicia faba; type=polypeptide; length=198bp
MAVNGTDSETHNNISFHSRNPQSPFLIALPFFKLPISQPPEIRTSISKAV
DHCSKLLLSLASQNPILNKLLSLSSHFHDTCFQIRLSNYRNRRLVLTWFP
NAPPAIVAPLSSVCDPYLNVFRGLIPPIGGLDLSPILAFLVLNAFTSTAA
ALPAELPITEQSKQGLETRLQPTDVTSSQNKWMRRLQGIGSKTSASAN
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mRNA from alignment at chr2:1122052043..1122054087-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Tiffany.R1.2g142040.1_tif_v1 ID=Vfaba.Tiffany.R1.2g142040.1_tif_v1; Name=Vfaba.Tiffany.R1.2g142040.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr2:1122052043..1122054087- (Vicia faba
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR003425CCB3/YggT
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane