Vfaba.Tiffany.R1.2g152480.1

Transcript Overview
NameVfaba.Tiffany.R1.2g152480.1
Unique NameVfaba.Tiffany.R1.2g152480.1_tif_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length522
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr2chromosomechr2:1199752421..1199753119 +Vicia faba cv. Tiffany genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
tifzwsR223Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifzwsR239Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
astifL571Vigna angularis Jingnong 6 genome v1.1Vigna angularis
astifL576Vigna angularis Jingnong 6 genome v1.1Vigna angularis
astifL772Vigna angularis Jingnong 6 genome v1.1Vigna angularis
catifL286Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
catifL388Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
catifL400Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cctifL0408Cajanus cajan Asha genome v1.0Cajanus cajan
cctifL0420Cajanus cajan Asha genome v1.0Cajanus cajan
crtifL323Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crtifL488Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crtifL506Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvtifL014Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tiftifR147Vicia faba cv. Tiffany genome v1.0Vicia faba
pstifL453Pisum sativum Cameor genome v1aPisum sativum
pstifL487Pisum sativum Cameor genome v1aPisum sativum
pstifL495Pisum sativum Cameor genome v1aPisum sativum
pstifL569Pisum sativum Cameor genome v1aPisum sativum
pvtifL789Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvtifL821Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvfhR144Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvfhR156Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuR289Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvuR320Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvuR332Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
antifL0093Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caitifL515Cicer arietinum ICC 4958 genome v2Cicer arietinum
antifL0329Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL0379Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL0737Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
tifvrvR250Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvrvR258Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvrvR285Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvssR233Vicia sativa cv. Studenica genome v1.0Vicia sativa
tifvuaR263Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
tifvuaR273Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
tifvuaR291Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
tifvssR268Vicia sativa cv. Studenica genome v1.0Vicia sativa
cantifL224Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cantifL330Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cantifL342Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Psat05G0092800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
jg55496.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.2g188680.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.2g152480Vfaba.Tiffany.R1.2g152480_tif_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.2g152480.1_tif_v1-exonVfaba.Tiffany.R1.2g152480.1_tif_v1-exon-chr2_tif_v1:1199752421..1199752631Vicia fabaexon
Vfaba.Tiffany.R1.2g152480.1_tif_v1-exonVfaba.Tiffany.R1.2g152480.1_tif_v1-exon-chr2_tif_v1:1199752717..1199752823Vicia fabaexon
Vfaba.Tiffany.R1.2g152480.1_tif_v1-exonVfaba.Tiffany.R1.2g152480.1_tif_v1-exon-chr2_tif_v1:1199752916..1199753119Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.2g152480.1_tif_v1-cdsVfaba.Tiffany.R1.2g152480.1_tif_v1-cds-chr2_tif_v1:1199752421..1199752631Vicia fabaCDS
Vfaba.Tiffany.R1.2g152480.1_tif_v1-cdsVfaba.Tiffany.R1.2g152480.1_tif_v1-cds-chr2_tif_v1:1199752717..1199752823Vicia fabaCDS
Vfaba.Tiffany.R1.2g152480.1_tif_v1-cdsVfaba.Tiffany.R1.2g152480.1_tif_v1-cds-chr2_tif_v1:1199752916..1199753119Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.2g152480.1_tif_v1Vfaba.Tiffany.R1.2g152480.1_tif_v1Vicia fabapolypeptide
Vfaba.Tiffany.R1.2g152480.1_tif_v1Vfaba.Tiffany.R1.2g152480.1_tif_v1-proteinVicia fabapolypeptide


Homology
[Close]
BLAST of Vfaba.Tiffany.R1.2g152480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5PE37|A0A6A5PE37_LUPAL (Putative Zinc finger, HIT-type OS=Lupinus albus OX=3870 GN=Lal_00022455 PE=4 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 1.047e-110
Identity = 153/173 (88.44%), Postives = 163/173 (94.22%), Query Frame = 0 
Query:    1 MEEDGSNSNRRTSSRTRKVASKMVAALASSDNRTQAALARLDALENDNTGFELPDPNIDDDEASLDDDDQVFMQRKQSKGTKRKTRQAKALEARKAPRTFLELLHDANLESLPPHVPTYWKAAVGPPSSTARRHFCTVCGFSANYTCVRCGMRFCSIRCQNVHNDTRCLKFVA 173
            ME+DGSN  RR SSRTRKVASKMVAAL+SSDNRTQAALARLDALENDN GFE+ D N DDDE SLDD+DQV+MQ+KQSKGTKRKTRQAKALEA+KAPRTFLELLH+ANLESLP +VPTYWKAAVGPPSST+RRHFCTVCGFSANYTCVRCGMRFCS RCQNVHNDTRCLKFVA
Sbjct:    1 MEDDGSNPLRRMSSRTRKVASKMVAALSSSDNRTQAALARLDALENDNAGFEVADANNDDDEVSLDDEDQVYMQKKQSKGTKRKTRQAKALEAKKAPRTFLELLHEANLESLPANVPTYWKAAVGPPSSTSRRHFCTVCGFSANYTCVRCGMRFCSYRCQNVHNDTRCLKFVA 173
[Close]
BLAST of Vfaba.Tiffany.R1.2g152480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072UYB1|A0A072UYB1_MEDTR (HIT zinc finger protein OS=Medicago truncatula OX=3880 GN=25490987 PE=4 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 5.251e-110
Identity = 165/173 (95.38%), Postives = 169/173 (97.69%), Query Frame = 0 
Query:    1 MEEDGSNSNRRTSSRTRKVASKMVAALASSDNRTQAALARLDALENDNTGFELPDPNIDDDEASLDDDDQVFMQRKQSKGTKRKTRQAKALEARKAPRTFLELLHDANLESLPPHVPTYWKAAVGPPSSTARRHFCTVCGFSANYTCVRCGMRFCSIRCQNVHNDTRCLKFVA 173
            MEEDGSNSNRRTS RTRKVASKMVAALASSDNRTQAALARLDALENDN GFE+ DPN+DDDEASLDDDDQV+MQRKQSKGTKRKTRQAKALEARKAPRTFLELLHDANLESLPPHVPTYWKAAVGPPSSTARRHFCTVCGFSANYTCVRCG+RFCS RCQNVHNDTRCLKFVA
Sbjct:    1 MEEDGSNSNRRTSGRTRKVASKMVAALASSDNRTQAALARLDALENDNAGFEVVDPNLDDDEASLDDDDQVYMQRKQSKGTKRKTRQAKALEARKAPRTFLELLHDANLESLPPHVPTYWKAAVGPPSSTARRHFCTVCGFSANYTCVRCGVRFCSNRCQNVHNDTRCLKFVA 173
[Close]
BLAST of Vfaba.Tiffany.R1.2g152480.1 vs. UniProtKB/TrEMBL
Match: tr|V7BLH2|V7BLH2_PHAVU (HIT-type domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G073900g PE=4 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 1.425e-109
Identity = 150/173 (86.71%), Postives = 163/173 (94.22%), Query Frame = 0 
Query:    1 MEEDGSNSNRRTSSRTRKVASKMVAALASSDNRTQAALARLDALENDNTGFELPDPNIDDDEASLDDDDQVFMQRKQSKGTKRKTRQAKALEARKAPRTFLELLHDANLESLPPHVPTYWKAAVGPPSSTARRHFCTVCGFSANYTCVRCGMRFCSIRCQNVHNDTRCLKFVA 173
            ME+DG++S RR SSRTRKVASKMVAALAS+DNRTQAALARLDALENDN GFE  D   DDDEASLD++DQ ++Q+KQSKGTKRKTRQAKALEAR+APRTFLELLH+ANLESLPPHVP+YWKAAVGPPSST+RRHFCTVCGFSANYTCVRCGMRFCS RCQNVHNDTRCLKFVA
Sbjct:    1 MEDDGASSVRRMSSRTRKVASKMVAALASADNRTQAALARLDALENDNAGFETADATNDDDEASLDEEDQFYIQKKQSKGTKRKTRQAKALEARRAPRTFLELLHEANLESLPPHVPSYWKAAVGPPSSTSRRHFCTVCGFSANYTCVRCGMRFCSYRCQNVHNDTRCLKFVA 173
[Close]
BLAST of Vfaba.Tiffany.R1.2g152480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6M772|A0A2Z6M772_TRISU (HIT-type domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_125390 PE=4 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 7.070e-109
Identity = 165/173 (95.38%), Postives = 167/173 (96.53%), Query Frame = 0 
Query:    1 MEEDGSNSNRRTSSRTRKVASKMVAALASSDNRTQAALARLDALENDNTGFELPDPNIDDDEASLDDDDQVFMQRKQSKGTKRKTRQAKALEARKAPRTFLELLHDANLESLPPHVPTYWKAAVGPPSSTARRHFCTVCGFSANYTCVRCGMRFCSIRCQNVHNDTRCLKFVA 173
            MEEDGSNSNRR SSRTRKVA+KMVAALASSDNRTQAALARLDALENDN GFE  DPNIDDDEASLDDDDQV+MQRKQSKGTKRKTRQAKALEARKAPRTFLELLHDANLESLPPHVPTY KAAVGPPSSTARRHFCTVCGFSANYTCVRCGMRFCS RCQNVHNDTRCLKFVA
Sbjct:    1 MEEDGSNSNRRMSSRTRKVATKMVAALASSDNRTQAALARLDALENDNAGFEAADPNIDDDEASLDDDDQVYMQRKQSKGTKRKTRQAKALEARKAPRTFLELLHDANLESLPPHVPTYLKAAVGPPSSTARRHFCTVCGFSANYTCVRCGMRFCSNRCQNVHNDTRCLKFVA 173
[Close]
BLAST of Vfaba.Tiffany.R1.2g152480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3M3G6|A0A2K3M3G6_TRIPR (Zinc finger HIT domain-containing protein 1 OS=Trifolium pratense OX=57577 GN=L195_g041378 PE=4 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 3.248e-108
Identity = 164/173 (94.80%), Postives = 167/173 (96.53%), Query Frame = 0 
Query:    1 MEEDGSNSNRRTSSRTRKVASKMVAALASSDNRTQAALARLDALENDNTGFELPDPNIDDDEASLDDDDQVFMQRKQSKGTKRKTRQAKALEARKAPRTFLELLHDANLESLPPHVPTYWKAAVGPPSSTARRHFCTVCGFSANYTCVRCGMRFCSIRCQNVHNDTRCLKFVA 173
            MEEDGSNS RRTS RTRKVA+KMVAALASSDNRTQAALARLDALENDN GFE  DPNIDDDEASLDDDDQV+MQRKQSKGTKRKTRQAKALEARKAPRTFLELL+DANLESLPPHVPTYWKAAVGPPSSTARRHFCTVCGFSANYTCVRCGMRFCS RCQNVHNDTRCLKFVA
Sbjct:    1 MEEDGSNSIRRTSGRTRKVATKMVAALASSDNRTQAALARLDALENDNAGFEAADPNIDDDEASLDDDDQVYMQRKQSKGTKRKTRQAKALEARKAPRTFLELLNDANLESLPPHVPTYWKAAVGPPSSTARRHFCTVCGFSANYTCVRCGMRFCSNRCQNVHNDTRCLKFVA 173
[Close]
BLAST of Vfaba.Tiffany.R1.2g152480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y6U5|A0A1S2Y6U5_CICAR (SWR1 complex subunit 6-like OS=Cicer arietinum OX=3827 GN=LOC101490497 PE=4 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.326e-105
Identity = 159/173 (91.91%), Postives = 166/173 (95.95%), Query Frame = 0 
Query:    1 MEEDGSNSNRRTSSRTRKVASKMVAALASSDNRTQAALARLDALENDNTGFELPDPNIDDDEASLDDDDQVFMQRKQSKGTKRKTRQAKALEARKAPRTFLELLHDANLESLPPHVPTYWKAAVGPPSSTARRHFCTVCGFSANYTCVRCGMRFCSIRCQNVHNDTRCLKFVA 173
            MEE+GSNS RR SSRTRKVASKMVAALASSDNRTQAALARLDALENDN GFE+ DPNIDDDEASLDDDDQ +MQ+KQSKGTKRKTRQAKALEA+KAP+TFLELLHDANLESLPPHVP+YWKAAVGPPSST RRHFCTVCGFSANYTCVRCGMRFCS RCQNVHNDTRCLKFVA
Sbjct:    1 MEEEGSNSVRRMSSRTRKVASKMVAALASSDNRTQAALARLDALENDNAGFEVVDPNIDDDEASLDDDDQGYMQKKQSKGTKRKTRQAKALEAKKAPKTFLELLHDANLESLPPHVPSYWKAAVGPPSSTCRRHFCTVCGFSANYTCVRCGMRFCSNRCQNVHNDTRCLKFVA 173
[Close]
BLAST of Vfaba.Tiffany.R1.2g152480.1 vs. UniProtKB/TrEMBL
Match: tr|I1MZV0|I1MZV0_SOYBN (HIT-type domain-containing protein OS=Glycine max OX=3847 GN=100804465 PE=4 SV=2)

HSP 1 Score: 307.76 bits (787), Expect = 4.014e-105
Identity = 152/173 (87.86%), Postives = 164/173 (94.80%), Query Frame = 0 
Query:    1 MEEDGSNSNRRTSSRTRKVASKMVAALASSDNRTQAALARLDALENDNTGFELPDPNIDDDEASLDDDDQVFMQRKQSKGTKRKTRQAKALEARKAPRTFLELLHDANLESLPPHVPTYWKAAVGPPSSTARRHFCTVCGFSANYTCVRCGMRFCSIRCQNVHNDTRCLKFVA 173
            ME+DGSNS RR SSRTRKVASKM AALAS+DNRTQAALARLDALENDN GFE+ D N DDD+ASLD++DQ +MQ+KQSKGTKRKTRQAKALEAR+APRTFLELLH+ANLESLPPHVP+YWKAAVGPPSST+RRHFCTVCGFSANYTCVRCGMRFCS RCQNVHNDTRCLKFVA
Sbjct:    1 MEDDGSNSIRRMSSRTRKVASKMAAALASADNRTQAALARLDALENDNAGFEIADANNDDDDASLDEEDQFYMQKKQSKGTKRKTRQAKALEARRAPRTFLELLHEANLESLPPHVPSYWKAAVGPPSSTSRRHFCTVCGFSANYTCVRCGMRFCSHRCQNVHNDTRCLKFVA 173
[Close]
BLAST of Vfaba.Tiffany.R1.2g152480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2NY85|A0A0B2NY85_GLYSO (SWR1 complex subunit 6 OS=Glycine soja OX=3848 GN=D0Y65_047633 PE=4 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 4.014e-105
Identity = 152/173 (87.86%), Postives = 164/173 (94.80%), Query Frame = 0 
Query:    1 MEEDGSNSNRRTSSRTRKVASKMVAALASSDNRTQAALARLDALENDNTGFELPDPNIDDDEASLDDDDQVFMQRKQSKGTKRKTRQAKALEARKAPRTFLELLHDANLESLPPHVPTYWKAAVGPPSSTARRHFCTVCGFSANYTCVRCGMRFCSIRCQNVHNDTRCLKFVA 173
            ME+DGSNS RR SSRTRKVASKM AALAS+DNRTQAALARLDALENDN GFE+ D N DDD+ASLD++DQ +MQ+KQSKGTKRKTRQAKALEAR+APRTFLELLH+ANLESLPPHVP+YWKAAVGPPSST+RRHFCTVCGFSANYTCVRCGMRFCS RCQNVHNDTRCLKFVA
Sbjct:    1 MEDDGSNSIRRMSSRTRKVASKMAAALASADNRTQAALARLDALENDNAGFEIADANNDDDDASLDEEDQFYMQKKQSKGTKRKTRQAKALEARRAPRTFLELLHEANLESLPPHVPSYWKAAVGPPSSTSRRHFCTVCGFSANYTCVRCGMRFCSHRCQNVHNDTRCLKFVA 173
[Close]
BLAST of Vfaba.Tiffany.R1.2g152480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y6X1|A0A1S2Y6X1_CICAR (SWR1 complex subunit 6-like OS=Cicer arietinum OX=3827 GN=LOC101491360 PE=4 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 4.103e-105
Identity = 158/173 (91.33%), Postives = 166/173 (95.95%), Query Frame = 0 
Query:    1 MEEDGSNSNRRTSSRTRKVASKMVAALASSDNRTQAALARLDALENDNTGFELPDPNIDDDEASLDDDDQVFMQRKQSKGTKRKTRQAKALEARKAPRTFLELLHDANLESLPPHVPTYWKAAVGPPSSTARRHFCTVCGFSANYTCVRCGMRFCSIRCQNVHNDTRCLKFVA 173
            MEE+GSNS RR SSRTRKVASKMVAALASSDNRTQAALARLDALENDN GFE+ DPNIDDDEASLDDDDQ +MQ+KQSKGTKRKTRQAKALEA+KAP+TFLELLHDANLESLPPHVP+YWKAAVGPPSST RRHFCTVCGFSANYTCVRCG+RFCS RCQNVHNDTRCLKFVA
Sbjct:    1 MEEEGSNSVRRMSSRTRKVASKMVAALASSDNRTQAALARLDALENDNAGFEVVDPNIDDDEASLDDDDQGYMQKKQSKGTKRKTRQAKALEAKKAPKTFLELLHDANLESLPPHVPSYWKAAVGPPSSTCRRHFCTVCGFSANYTCVRCGVRFCSSRCQNVHNDTRCLKFVA 173
[Close]
BLAST of Vfaba.Tiffany.R1.2g152480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3TU96|A0A1S3TU96_VIGRR (SWR1 complex subunit 6 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106758845 PE=4 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 3.603e-103
Identity = 150/173 (86.71%), Postives = 164/173 (94.80%), Query Frame = 0 
Query:    1 MEEDGSNSNRRTSSRTRKVASKMVAALASSDNRTQAALARLDALENDNTGFELPDPNIDDDEASLDDDDQVFMQRKQSKGTKRKTRQAKALEARKAPRTFLELLHDANLESLPPHVPTYWKAAVGPPSSTARRHFCTVCGFSANYTCVRCGMRFCSIRCQNVHNDTRCLKFVA 173
            ME+DGS+S RR SSRTRKVASKM AALAS+DNRTQAALARLDALENDN GFE+ D N DDDEASLD++DQ ++Q+KQSKGTKRKTRQAKALEAR+APRTFLELLH+ANLESLPPHVP+YWKAAVGPPS+T+RRHFCTVCGFSANYTCVRCGMRFCS RCQNVHNDTRCLKFVA
Sbjct:    1 MEDDGSSSIRRMSSRTRKVASKMAAALASADNRTQAALARLDALENDNAGFEIADANNDDDEASLDEEDQYYIQKKQSKGTKRKTRQAKALEARRAPRTFLELLHEANLESLPPHVPSYWKAAVGPPSTTSRRHFCTVCGFSANYTCVRCGMRFCSYRCQNVHNDTRCLKFVA 173
[Close]
BLAST of Vfaba.Tiffany.R1.2g152480.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FHW2|SWC6_ARATH (SWR1 complex subunit 6 OS=Arabidopsis thaliana OX=3702 GN=SWC6 PE=1 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 8.250e-89
Identity = 126/174 (72.41%), Postives = 149/174 (85.63%), Query Frame = 0 
Query:    1 MEEDGSNSNRRTSSRTRKVASKMVAALASSDNRTQAALARLDALENDNTGFELPDPNIDDDEASLDDDDQV-FMQRKQSKGTKRKTRQAKALEARKAPRTFLELLHDANLESLPPHVPTYWKAAVGPPSSTARRHFCTVCGFSANYTCVRCGMRFCSIRCQNVHNDTRCLKFVA 173
            MEE+ SN  RR S+RTRKVA+KM AAL S+DNRTQAA+ARL+ALENDN   E+ D N DD+EASLD+DD + ++Q+KQ KG+KRKTRQAKALEARKAP++FLELL +ANLESLP HVPTY KAAVGPPSS++RR+FC+VCG+ A Y C  CGMRFCSIRCQN+H DTRC KFVA
Sbjct:    1 MEEEMSN--RRVSNRTRKVATKMAAALTSNDNRTQAAIARLEALENDNGAIEVIDLN-DDEEASLDEDDDLGYLQKKQHKGSKRKTRQAKALEARKAPKSFLELLQEANLESLPSHVPTYLKAAVGPPSSSSRRYFCSVCGYIAGYNCCLCGMRFCSIRCQNIHKDTRCQKFVA 171
[Close]
BLAST of Vfaba.Tiffany.R1.2g152480.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q54NW0|ZNHI1_DICDI (Zinc finger HIT domain-containing protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=znhit1 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.659e-19
Identity = 53/163 (32.52%), Postives = 84/163 (51.53%), Query Frame = 0 
Query:   13 SSRTRKVASKMVAALASSDNRT---QAALARLDALENDNTGFELPDPNIDDDEASLDDDDQVFMQRKQSKGTKRKTRQAKALEARKAPRTFLELLHDANLESLPPHVPTYW----KAAVGPPSSTARRHFCTVCGFSANYTCVRCGMRFCSIRCQNVHNDTRC 168
            SS+ +   SK     +  D R    +   ARL++L++DN    +     ++D    DD++++      +K      R+ K  E +     F ++L  + LE+ P HVPTY     K ++ PP     RHFC++CG+   YTC +C  R+CSI+C N HN+TRC
Sbjct:   14 SSKRKSQISKRYRVTSEEDRRNLKEKVISARLESLDDDNEQQPIGSRGDEEDNDYNDDENEIVYTTPVNKKRLFIAREKKKNEKKSMNLNFNDVLEKSYLETFPDHVPTYISVQSKPSIFPP-----RHFCSICGYIGAYTCKQCSSRYCSIKCFNYHNETRC 171
[Close]
BLAST of Vfaba.Tiffany.R1.2g152480.1 vs. UniProtKB/Swiss-Prot
Match: sp|O43257|ZNHI1_HUMAN (Zinc finger HIT domain-containing protein 1 OS=Homo sapiens OX=9606 GN=ZNHIT1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.590e-17
Identity = 56/165 (33.94%), Postives = 81/165 (49.09%), Query Frame = 0 
Query:   10 RRTSSRTRKVASKMVAALASSDNRTQAALARLDALENDNTGFELPDPNIDDDEASLDDDDQVFMQRKQSKGTKRKTRQAKALEAR-KAPRTFLELLHDANLESLPPHVPTYWKAAVGPPSSTARRHFCTVCGFSANYTCVRCGMRFCSIRCQNVHNDTRCLKFVA 173
            ++TS R++    + V   A+   R      +L+ALENDN  F+      DD  A L    +   Q      T +K ++ +    + +  + F  LL + NL       P Y  A  GPPS   +R FC VCGF + YTCV CG R+C++RC   H +TRCLK+  
Sbjct:    4 KKTSVRSQDPGQRRVLDRAARQRRINR---QLEALENDN--FQ------DDPHAGLPQLGKRLPQFDDDADTGKKKKKTRGDHFKLRFRKNFQALLEEQNLSVA--EGPNYLTACAGPPSR-PQRPFCAVCGFPSPYTCVSCGARYCTVRCLGTHQETRCLKWTV 154
[Close]
BLAST of Vfaba.Tiffany.R1.2g152480.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q24JY4|ZNHI1_BOVIN (Zinc finger HIT domain-containing protein 1 OS=Bos taurus OX=9913 GN=ZNHIT1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.590e-17
Identity = 56/165 (33.94%), Postives = 81/165 (49.09%), Query Frame = 0 
Query:   10 RRTSSRTRKVASKMVAALASSDNRTQAALARLDALENDNTGFELPDPNIDDDEASLDDDDQVFMQRKQSKGTKRKTRQAKALEAR-KAPRTFLELLHDANLESLPPHVPTYWKAAVGPPSSTARRHFCTVCGFSANYTCVRCGMRFCSIRCQNVHNDTRCLKFVA 173
            ++TS R++    + V   A+   R      +L+ALENDN  F+      DD  A L    +   Q      T +K ++ +    + +  + F  LL + NL       P Y  A  GPPS   +R FC VCGF + YTCV CG R+C++RC   H +TRCLK+  
Sbjct:    4 KKTSVRSQDPGQRRVLDRAARQRRINR---QLEALENDN--FQ------DDPHAGLPQLGKRLPQFDDDADTGKKKKKTRGDHFKLRFRKNFQALLEEQNLSVA--EGPNYLTACAGPPSR-PQRPFCAVCGFPSPYTCVSCGARYCTVRCLGTHQETRCLKWTV 154
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BLAST of Vfaba.Tiffany.R1.2g152480.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q8R331|ZNHI1_MOUSE (Zinc finger HIT domain-containing protein 1 OS=Mus musculus OX=10090 GN=Znhit1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 5.339e-17
Identity = 50/135 (37.04%), Postives = 70/135 (51.85%), Query Frame = 0 
Query:   40 RLDALENDNTGFELPDPNIDDDEASLDDDDQVFMQRKQSKGTKRKTRQAKALEAR-KAPRTFLELLHDANLESLPPHVPTYWKAAVGPPSSTARRHFCTVCGFSANYTCVRCGMRFCSIRCQNVHNDTRCLKFVA 173
            +L+ALENDN  F+      DD  A L    +   Q      T +K ++ +    + +  + F  LL + NL +     P Y  A  GPPS   +R FC VCGF + YTCV CG R+C++RC   H +TRCLK+  
Sbjct:   31 QLEALENDN--FQ------DDPHAGLPQLGKRLPQFDDDADTGKKKKKTRGDHFKLRFRKNFQALLEEQNLSA--SEGPNYLTACAGPPSR-PQRPFCAVCGFPSPYTCVSCGARYCTVRCLGTHQETRCLKWTV 154
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BLAST of Vfaba.Tiffany.R1.2g152480.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q4U9I8|SEY1_THEAN (Protein SEY1 homolog OS=Theileria annulata OX=5874 GN=TA08650 PE=3 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.644e-10
Identity = 31/99 (31.31%), Postives = 49/99 (49.49%), Query Frame = 0 
Query:   82 KRKTRQAKALEARKAPRTFLELLHDANLESLPPHVPTYWKAAVGPPSSTARRHFCTVCGFSANYTCVRCGMR--------FCSIRCQNVHNDTRCLKFV 172
            K  T+ + ++   + P     ++    +E+   ++P  W+AA     +  +RH C +CGF ANY C  C  R        +CS+RC  VHN+T C K V
Sbjct:  816 KTVTKSSHSIYKHREPMDINLIVDHDEVEAEKNNLPC-WRAAYASGPARPQRHLCVICGFFANYKCRNCATRRIEAINSYYCSLRCLEVHNETNCGKAV 913
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BLAST of Vfaba.Tiffany.R1.2g152480.1 vs. Araport11
Match: AT5G37055.1 (| HIT-type Zinc finger family protein | Chr5:14641634-14642387 REVERSE LENGTH=171 | 201606)

HSP 1 Score: 259.996 bits (663), Expect = 8.440e-90
Identity = 126/174 (72.41%), Postives = 149/174 (85.63%), Query Frame = 0 
Query:    1 MEEDGSNSNRRTSSRTRKVASKMVAALASSDNRTQAALARLDALENDNTGFELPDPNIDDDEASLDDDDQV-FMQRKQSKGTKRKTRQAKALEARKAPRTFLELLHDANLESLPPHVPTYWKAAVGPPSSTARRHFCTVCGFSANYTCVRCGMRFCSIRCQNVHNDTRCLKFVA 173
            MEE+ SN  RR S+RTRKVA+KM AAL S+DNRTQAA+ARL+ALENDN   E+ D N DD+EASLD+DD + ++Q+KQ KG+KRKTRQAKALEARKAP++FLELL +ANLESLP HVPTY KAAVGPPSS++RR+FC+VCG+ A Y C  CGMRFCSIRCQN+H DTRC KFVA
Sbjct:    1 MEEEMSN--RRVSNRTRKVATKMAAALTSNDNRTQAAIARLEALENDNGAIEVIDLN-DDEEASLDEDDDLGYLQKKQHKGSKRKTRQAKALEARKAPKSFLELLQEANLESLPSHVPTYLKAAVGPPSSSSRRYFCSVCGYIAGYNCCLCGMRFCSIRCQNIHKDTRCQKFVA 171
The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.2g152480.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A6A5PE37|A0A6A5PE37_LUPAL1.047e-11088.44Putative Zinc finger, HIT-type OS=Lupinus albus OX... [more]
tr|A0A072UYB1|A0A072UYB1_MEDTR5.251e-11095.38HIT zinc finger protein OS=Medicago truncatula OX=... [more]
tr|V7BLH2|V7BLH2_PHAVU1.425e-10986.71HIT-type domain-containing protein OS=Phaseolus vu... [more]
tr|A0A2Z6M772|A0A2Z6M772_TRISU7.070e-10995.38HIT-type domain-containing protein OS=Trifolium su... [more]
tr|A0A2K3M3G6|A0A2K3M3G6_TRIPR3.248e-10894.80Zinc finger HIT domain-containing protein 1 OS=Tri... [more]
tr|A0A1S2Y6U5|A0A1S2Y6U5_CICAR1.326e-10591.91SWR1 complex subunit 6-like OS=Cicer arietinum OX=... [more]
tr|I1MZV0|I1MZV0_SOYBN4.014e-10587.86HIT-type domain-containing protein OS=Glycine max ... [more]
tr|A0A0B2NY85|A0A0B2NY85_GLYSO4.014e-10587.86SWR1 complex subunit 6 OS=Glycine soja OX=3848 GN=... [more]
tr|A0A1S2Y6X1|A0A1S2Y6X1_CICAR4.103e-10591.33SWR1 complex subunit 6-like OS=Cicer arietinum OX=... [more]
tr|A0A1S3TU96|A0A1S3TU96_VIGRR3.603e-10386.71SWR1 complex subunit 6 isoform X1 OS=Vigna radiata... [more]
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BLAST of Vfaba.Tiffany.R1.2g152480.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot)
Total hits: 6
Match NameE-valueIdentityDescription
sp|Q9FHW2|SWC6_ARATH8.250e-8972.41SWR1 complex subunit 6 OS=Arabidopsis thaliana OX=... [more]
sp|Q54NW0|ZNHI1_DICDI1.659e-1932.52Zinc finger HIT domain-containing protein 1 homolo... [more]
sp|O43257|ZNHI1_HUMAN2.590e-1733.94Zinc finger HIT domain-containing protein 1 OS=Hom... [more]
sp|Q24JY4|ZNHI1_BOVIN2.590e-1733.94Zinc finger HIT domain-containing protein 1 OS=Bos... [more]
sp|Q8R331|ZNHI1_MOUSE5.339e-1737.04Zinc finger HIT domain-containing protein 1 OS=Mus... [more]
sp|Q4U9I8|SEY1_THEAN2.644e-1031.31Protein SEY1 homolog OS=Theileria annulata OX=5874... [more]
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BLAST of Vfaba.Tiffany.R1.2g152480.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G37055.18.440e-9072.41| HIT-type Zinc finger family protein | Chr5:14641... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.60.190coord: 126..173
e-value: 1.8E-5
score: 26.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..67
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 131..165
IPR007529Zinc finger, HIT-typePFAMPF04438zf-HITcoord: 132..160
e-value: 1.1E-11
score: 44.4
IPR007529Zinc finger, HIT-typePROSITEPS51083ZF_HITcoord: 136..168
score: 9.894067
IPR039723Vps71/ZNHIT1PANTHERPTHR13093ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 1coord: 7..172

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Tiffany.R1.2g152480.1_tif_v1 ID=Vfaba.Tiffany.R1.2g152480.1_tif_v1; Name=Vfaba.Tiffany.R1.2g152480.1; organism=Vicia faba; type=mRNA; length=522bp
ATGGAAGAAGATGGTTCCAACTCAAACCGCCGCACGTCAAGCCGAACCCG
AAAAGTTGCCTCCAAAATGGTCGCCGCACTTGCTAGCTCCGACAACCGCA
CTCAAGCGGCTCTTGCACGATTGGATGCTTTGGAGAATGATAATACCGGA
TTCGAACTTCCAGATCCCAATATTGACGATGATGAAGCTTCTCTAGACGA
CGATGATCAAGTGTTTATGCAGAGAAAACAATCTAAAGGCACCAAGAGAA
AAACAAGACAAGCAAAAGCACTTGAAGCTAGGAAGGCTCCAAGAACATTT
CTTGAGCTCTTACATGATGCGAACTTGGAATCATTGCCTCCACATGTTCC
AACCTATTGGAAAGCAGCAGTTGGGCCTCCGAGCTCGACCGCGCGGCGTC
ATTTTTGTACTGTATGTGGTTTCTCTGCCAATTATACATGTGTTAGATGT
GGTATGCGGTTTTGTTCGATTCGGTGTCAAAACGTGCATAATGATACTAG
ATGCTTGAAATTTGTTGCCTAA
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protein sequence of Vfaba.Tiffany.R1.2g152480.1_tif_v1

>Vfaba.Tiffany.R1.2g152480.1_tif_v1 ID=Vfaba.Tiffany.R1.2g152480.1_tif_v1; Name=Vfaba.Tiffany.R1.2g152480.1_tif_v1; organism=Vicia faba; type=polypeptide; length=173bp
MEEDGSNSNRRTSSRTRKVASKMVAALASSDNRTQAALARLDALENDNTG
FELPDPNIDDDEASLDDDDQVFMQRKQSKGTKRKTRQAKALEARKAPRTF
LELLHDANLESLPPHVPTYWKAAVGPPSSTARRHFCTVCGFSANYTCVRC
GMRFCSIRCQNVHNDTRCLKFVA
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mRNA from alignment at chr2:1199752421..1199753119+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Tiffany.R1.2g152480.1_tif_v1 ID=Vfaba.Tiffany.R1.2g152480.1_tif_v1; Name=Vfaba.Tiffany.R1.2g152480.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr2:1199752421..1199753119+ (Vicia faba
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR007529Znf_HIT
IPR039723Vps71/ZNHIT1
Vocabulary: Biological Process
TermDefinition
GO:0006338chromatin remodeling