Vfaba.Tiffany.R1.2g206480.1

Transcript Overview
NameVfaba.Tiffany.R1.2g206480.1
Unique NameVfaba.Tiffany.R1.2g206480.1_tif_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length447
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr2chromosomechr2:1644965517..1644966134 +Vicia faba cv. Tiffany genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
tifzwsR195Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifzwsR202Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifzwsR213Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifzwsR252Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
astifL046Vigna angularis Jingnong 6 genome v1.1Vigna angularis
astifL567Vigna angularis Jingnong 6 genome v1.1Vigna angularis
astifL651Vigna angularis Jingnong 6 genome v1.1Vigna angularis
catifL041Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
catifL390Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
catifL484Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
catifL612Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cctifL0290Cajanus cajan Asha genome v1.0Cajanus cajan
cctifL0403Cajanus cajan Asha genome v1.0Cajanus cajan
crtifL057Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crtifL058Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crtifL606Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crtifL751Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
tiftifL138Vicia faba cv. Tiffany genome v1.0Vicia faba
tiftifR165Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifL083Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pstifL298Pisum sativum Cameor genome v1aPisum sativum
pvtifL351Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pstifL443Pisum sativum Cameor genome v1aPisum sativum
pvtifL498Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pstifL712Pisum sativum Cameor genome v1aPisum sativum
pvtifL823Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvuR226Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvuR254Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvuR266Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvfhR145Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvfhR176Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuR326Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
antifL0023Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL0095Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL0232Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL0328Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caitifL663Cicer arietinum ICC 4958 genome v2Cicer arietinum
caitifL822Cicer arietinum ICC 4958 genome v2Cicer arietinum
antifL0733Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL0739Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL0881Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL0958Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL1208Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
tifvrvR192Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvrvR254Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvrvR263Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvrvR300Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvuaR186Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
tifvssR225Vicia sativa cv. Studenica genome v1.0Vicia sativa
tifvuaR219Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
tifvuaR223Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
tifvssR232Vicia sativa cv. Studenica genome v1.0Vicia sativa
tifvssR261Vicia sativa cv. Studenica genome v1.0Vicia sativa
tifvssR299Vicia sativa cv. Studenica genome v1.0Vicia sativa
cantifL334Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cantifL423Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cantifL545Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
rna-TanjilR_30126Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.010G153700.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Ca_18028.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
evm.model.Chr05.2713Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun09g207300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Cr_19478.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-XM_004508568.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Cr_03004.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Phvul.003G162400.2Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Ca_13449Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Psat07G0706300-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigun10g188400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-XM_022782940.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-TanjilR_12500Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_06648Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Ca_21669.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Psat04G0137800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigun05g290500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-TanjilR_26268Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_18557Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.005G175000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Cr_14769.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
jg19418.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.model.Chr03.1886Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
LR48_mrnaVigan01g261300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Ca_01775Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-KK1_000187Cajanus cajan Asha genome v1.0Cajanus cajan
evm.model.Chr10.1766Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
jg57365.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-XM_014660374.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_004506845.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_014644242.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun03g353500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Psat05G0100700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-XM_004501253.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Phvul.009G094900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
LR48_mrnaVigan04g216200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Psat4g041680.1Pisum sativum Cameor genome v1aPisum sativum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.2g264280.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.2g149920.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.2g206480Vfaba.Tiffany.R1.2g206480_tif_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.2g206480.1_tif_v1-exonVfaba.Tiffany.R1.2g206480.1_tif_v1-exon-chr2_tif_v1:1644965517..1644965887Vicia fabaexon
Vfaba.Tiffany.R1.2g206480.1_tif_v1-exonVfaba.Tiffany.R1.2g206480.1_tif_v1-exon-chr2_tif_v1:1644966059..1644966134Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.2g206480.1_tif_v1-cdsVfaba.Tiffany.R1.2g206480.1_tif_v1-cds-chr2_tif_v1:1644965517..1644965887Vicia fabaCDS
Vfaba.Tiffany.R1.2g206480.1_tif_v1-cdsVfaba.Tiffany.R1.2g206480.1_tif_v1-cds-chr2_tif_v1:1644966059..1644966134Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.2g206480.1_tif_v1Vfaba.Tiffany.R1.2g206480.1_tif_v1Vicia fabapolypeptide
Vfaba.Tiffany.R1.2g206480.1_tif_v1Vfaba.Tiffany.R1.2g206480.1_tif_v1-proteinVicia fabapolypeptide


Homology
[Close]
BLAST of Vfaba.Tiffany.R1.2g206480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072UG31|A0A072UG31_MEDTR (Putative Zinc finger, RanBP2-type OS=Medicago truncatula OX=3880 GN=25491332 PE=4 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 1.217e-99
Identity = 146/148 (98.65%), Postives = 147/148 (99.32%), Query Frame = 0 
Query:    1 MSRPGDWNCRSCQHMNFQRRESCQRCGDSKYGERVDYGSVFGGIRGGSSFGLSGSDVRLGDWYCGAGNCGAHNFASRLSCFKCGAFKDELAGGGYNNSTDILLSRGFGGSTRPGWKSGDWICNRLGCNEHNFASRMECFKCSAPRDTY 148
            MSRPGDWNCRSCQHMNFQRRESCQRCGDSKYGERVDYGSVFGGIRGGSSFGLSGSDVRLGDWYCGAGNCGAHNFASRLSCFKCGAFKD+LAGGGYNNS DILLSRGFGGSTRPGWKSGDWICNRLGCNEHNFASRMECFKCSAPRDTY
Sbjct:    1 MSRPGDWNCRSCQHMNFQRRESCQRCGDSKYGERVDYGSVFGGIRGGSSFGLSGSDVRLGDWYCGAGNCGAHNFASRLSCFKCGAFKDDLAGGGYNNS-DILLSRGFGGSTRPGWKSGDWICNRLGCNEHNFASRMECFKCSAPRDTY 147
[Close]
BLAST of Vfaba.Tiffany.R1.2g206480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YM71|A0A1S2YM71_CICAR (uncharacterized RNA-binding protein C17H9.04c OS=Cicer arietinum OX=3827 GN=LOC101505048 PE=4 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 1.134e-76
Identity = 120/148 (81.08%), Postives = 129/148 (87.16%), Query Frame = 0 
Query:    1 MSRPGDWNCRSCQHMNFQRRESCQRCGDSKYGERVDYGSVFGGIRGGSSFGLSGSDVRLGDWYCGAGNCGAHNFASRLSCFKCGAFKDELAGGGYNNSTDILLSRGFGGSTRPGWKSGDWICNRLGCNEHNFASRMECFKCSAPRDTY 148
            MSRPGDWNCRSC H+NFQRR+SCQRCGDSK+GERV+YG+  G         LSGSDVRLGDWYC AGNCGAHNFASRLSCFKCGAFKDEL GG  NN++DIL SR FGGS +PGWKSGDW+CNRLGCNEHNFASRMECFKCSAPRDTY
Sbjct:    1 MSRPGDWNCRSCHHLNFQRRDSCQRCGDSKFGERVEYGTFGGRGGSSFG--LSGSDVRLGDWYCAAGNCGAHNFASRLSCFKCGAFKDELVGGYNNNNSDILGSRAFGGSGKPGWKSGDWMCNRLGCNEHNFASRMECFKCSAPRDTY 146
[Close]
BLAST of Vfaba.Tiffany.R1.2g206480.1 vs. UniProtKB/TrEMBL
Match: tr|C6T4M1|C6T4M1_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100527535 PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 1.225e-74
Identity = 124/148 (83.78%), Postives = 131/148 (88.51%), Query Frame = 0 
Query:    1 MSRPGDWNCRSCQHMNFQRRESCQRCGDSKYGERVDYGSVFGGIRGGSSFGLSGSDVRLGDWYCGAGNCGAHNFASRLSCFKCGAFKDELAGGGYNNSTDILLSRGFGGSTRPGWKSGDWICNRLGCNEHNFASRMECFKCSAPRDTY 148
            MSRPGDWNCRSCQH+NFQRR+SCQRCGDSKYG+RV       G RGGSSFGL+GSDVR GDWYC A NCGAHNFASR SCFKCGAFKD+LAGGGYN S+DIL SR FGGS RPGWKSGDWIC+R GCNEHNFASRMECFKCSAPRDTY
Sbjct:    1 MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYGDRV-VDFGGFGGRGGSSFGLTGSDVRPGDWYCAAANCGAHNFASRSSCFKCGAFKDDLAGGGYN-SSDILRSRAFGGSGRPGWKSGDWICSRSGCNEHNFASRMECFKCSAPRDTY 146
[Close]
BLAST of Vfaba.Tiffany.R1.2g206480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2STG1|A0A0B2STG1_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_021179 PE=4 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 1.225e-74
Identity = 124/148 (83.78%), Postives = 131/148 (88.51%), Query Frame = 0 
Query:    1 MSRPGDWNCRSCQHMNFQRRESCQRCGDSKYGERVDYGSVFGGIRGGSSFGLSGSDVRLGDWYCGAGNCGAHNFASRLSCFKCGAFKDELAGGGYNNSTDILLSRGFGGSTRPGWKSGDWICNRLGCNEHNFASRMECFKCSAPRDTY 148
            MSRPGDWNCRSCQH+NFQRR+SCQRCGDSKYG+RV       G RGGSSFGL+GSDVR GDWYC A NCGAHNFASR SCFKCGAFKD+LAGGGYN S+DIL SR FGGS RPGWKSGDWIC+R GCNEHNFASRMECFKCSAPRDTY
Sbjct:    1 MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYGDRV-VDFGGFGGRGGSSFGLTGSDVRPGDWYCAAANCGAHNFASRSSCFKCGAFKDDLAGGGYN-SSDILRSRAFGGSGRPGWKSGDWICSRSGCNEHNFASRMECFKCSAPRDTY 146
[Close]
BLAST of Vfaba.Tiffany.R1.2g206480.1 vs. UniProtKB/TrEMBL
Match: tr|V7AU49|V7AU49_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_010G153700g PE=4 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 7.892e-74
Identity = 116/148 (78.38%), Postives = 126/148 (85.14%), Query Frame = 0 
Query:    1 MSRPGDWNCRSCQHMNFQRRESCQRCGDSKYGERVDYGSVFGGIRGGSSFGLSGSDVRLGDWYCGAGNCGAHNFASRLSCFKCGAFKDELAGGGYNNSTDILLSRGFGGSTRPGWKSGDWICNRLGCNEHNFASRMECFKCSAPRDTY 148
            MSRPGDWNCRSCQH+NFQRR+SCQRCGDSKYG+R+D+G+  G         L+GSDVR GDWYC A NCGAHNFASR SCFKCGAFKD+LAGG YN  +DIL SR FGGS RPGWKSGDWIC+R GCNEHNFASRMECFKCSAPRDTY
Sbjct:    1 MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYGDRIDFGAFGGRGGSSFG--LTGSDVRPGDWYCAAANCGAHNFASRSSCFKCGAFKDDLAGG-YN--SDILRSRAFGGSGRPGWKSGDWICSRSGCNEHNFASRMECFKCSAPRDTY 143
[Close]
BLAST of Vfaba.Tiffany.R1.2g206480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3T0R2|A0A0S3T0R2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.09G222000 PE=4 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 7.892e-74
Identity = 116/148 (78.38%), Postives = 126/148 (85.14%), Query Frame = 0 
Query:    1 MSRPGDWNCRSCQHMNFQRRESCQRCGDSKYGERVDYGSVFGGIRGGSSFGLSGSDVRLGDWYCGAGNCGAHNFASRLSCFKCGAFKDELAGGGYNNSTDILLSRGFGGSTRPGWKSGDWICNRLGCNEHNFASRMECFKCSAPRDTY 148
            MSRPGDWNCRSCQH+NFQRR+SCQRCGDSKYG+R+D+G+  G         L+GSDVR GDWYC A NCGAHNFASR SCFKCGAFKD+LAGG YN  +DIL SR FGGS RPGWKSGDWIC+R GCNEHNFASRMECFKCSAPRDTY
Sbjct:    1 MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYGDRIDFGAFGGRGGSSFG--LTGSDVRPGDWYCAAANCGAHNFASRSSCFKCGAFKDDLAGG-YN--SDILRSRAFGGSGRPGWKSGDWICSRSGCNEHNFASRMECFKCSAPRDTY 143
[Close]
BLAST of Vfaba.Tiffany.R1.2g206480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9T9Q6|A0A0L9T9Q6_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan406s012300 PE=4 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 7.892e-74
Identity = 116/148 (78.38%), Postives = 126/148 (85.14%), Query Frame = 0 
Query:    1 MSRPGDWNCRSCQHMNFQRRESCQRCGDSKYGERVDYGSVFGGIRGGSSFGLSGSDVRLGDWYCGAGNCGAHNFASRLSCFKCGAFKDELAGGGYNNSTDILLSRGFGGSTRPGWKSGDWICNRLGCNEHNFASRMECFKCSAPRDTY 148
            MSRPGDWNCRSCQH+NFQRR+SCQRCGDSKYG+R+D+G+  G         L+GSDVR GDWYC A NCGAHNFASR SCFKCGAFKD+LAGG YN  +DIL SR FGGS RPGWKSGDWIC+R GCNEHNFASRMECFKCSAPRDTY
Sbjct:    1 MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYGDRIDFGAFGGRGGSSFG--LTGSDVRPGDWYCAAANCGAHNFASRSSCFKCGAFKDDLAGG-YN--SDILRSRAFGGSGRPGWKSGDWICSRSGCNEHNFASRMECFKCSAPRDTY 143
[Close]
BLAST of Vfaba.Tiffany.R1.2g206480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3VC72|A0A1S3VC72_VIGRR (zinc finger Ran-binding domain-containing protein 2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106773645 PE=4 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 7.892e-74
Identity = 116/148 (78.38%), Postives = 126/148 (85.14%), Query Frame = 0 
Query:    1 MSRPGDWNCRSCQHMNFQRRESCQRCGDSKYGERVDYGSVFGGIRGGSSFGLSGSDVRLGDWYCGAGNCGAHNFASRLSCFKCGAFKDELAGGGYNNSTDILLSRGFGGSTRPGWKSGDWICNRLGCNEHNFASRMECFKCSAPRDTY 148
            MSRPGDWNCRSCQH+NFQRR+SCQRCGDSKYG+R+D+G+  G         L+GSDVR GDWYC A NCGAHNFASR SCFKCGAFKD+LAGG YN  +DIL SR FGGS RPGWKSGDWIC+R GCNEHNFASRMECFKCSAPRDTY
Sbjct:    1 MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYGDRIDFGAFGGRGGSSFG--LTGSDVRPGDWYCAAANCGAHNFASRSSCFKCGAFKDDLAGG-YN--SDILRSRAFGGSGRPGWKSGDWICSRSGCNEHNFASRMECFKCSAPRDTY 143
[Close]
BLAST of Vfaba.Tiffany.R1.2g206480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371HNR0|A0A371HNR0_MUCPR (SPAC17H9.04c (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_11872 PE=4 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 1.335e-72
Identity = 120/148 (81.08%), Postives = 128/148 (86.49%), Query Frame = 0 
Query:    1 MSRPGDWNCRSCQHMNFQRRESCQRCGDSKYGERVDYGSVFGGIRGGSSFGLSGSDVRLGDWYCGAGNCGAHNFASRLSCFKCGAFKDELAGGGYNNSTDILLSRGFGGSTRPGWKSGDWICNRLGCNEHNFASRMECFKCSAPRDTY 148
            MSRPGDWNCRSCQH+NFQRR+SCQRCGDSKYG+RVD+G   G   GGSSFGL+GSDVR GDWYC A NCGAHNFASR SCFKCGAFKD+LAG    N+TDIL SR FG + RPGWKSGDWIC R GCNEHNFASRMECFKCSAPRDTY
Sbjct:   39 MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYGDRVDFGGFGGR--GGSSFGLTGSDVRPGDWYCAAANCGAHNFASRSSCFKCGAFKDDLAGP--YNTTDILRSRAFGATGRPGWKSGDWICTRSGCNEHNFASRMECFKCSAPRDTY 182
[Close]
BLAST of Vfaba.Tiffany.R1.2g206480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151SH35|A0A151SH35_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_000187 PE=4 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.700e-72
Identity = 116/148 (78.38%), Postives = 124/148 (83.78%), Query Frame = 0 
Query:    1 MSRPGDWNCRSCQHMNFQRRESCQRCGDSKYGERVDYGSVFGGIRGGSSFGLSGSDVRLGDWYCGAGNCGAHNFASRLSCFKCGAFKDELAGGGYNNSTDILLSRGFGGSTRPGWKSGDWICNRLGCNEHNFASRMECFKCSAPRDTY 148
            MSRPGDWNCRSCQH+NFQRR+SCQRCGDSKYG+RVD+G   G         L+GSDVR GDWYC A NCGAHNFASR SCFKCGAFKD+LAGG    S+DIL SR FGGS RPGWKSGDWIC+R GCNEHNFASRMECFKCSAPRDTY
Sbjct:    1 MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYGDRVDFGGFGGRGGSSFG--LTGSDVRPGDWYCAAANCGAHNFASRSSCFKCGAFKDDLAGG---YSSDILRSRAFGGSGRPGWKSGDWICSRSGCNEHNFASRMECFKCSAPRDTY 143
[Close]
BLAST of Vfaba.Tiffany.R1.2g206480.1 vs. Araport11
Match: AT3G15680.2 (| Ran BP2/NZF zinc finger-like superfamily protein | Chr3:5315437-5316048 FORWARD LENGTH=164 | 201606)

HSP 1 Score: 182.185 bits (461), Expect = 1.521e-59
Identity = 101/159 (63.52%), Postives = 114/159 (71.70%), Query Frame = 0 
Query:    1 MSRPGDWNCRSCQHMNFQRRESCQRCGDSKYGER----VDYGSVFGGIRGGSSFGLS-GSDVRLGDWYCGAGNCGAHNFASRLSCFKCGAFKDELAGGGYNN--------STDILLSRGFGGSTRPGWKSGDWICNRLGCNEHNFASRMECFKCSAPRD 146
            MSRPGDWNCRSC H+NFQRR+SCQRCGDS+ G      +D+G+ FGG R  S+FG + GSDVR GDWYC  GNCG HNFASR +CFKCG FKDE   GG             DI+ SR  G   R  WKSGDWIC R+GCNEHNFASRMECF+C+APRD
Sbjct:    1 MSRPGDWNCRSCSHLNFQRRDSCQRCGDSRSGPGGVGGLDFGN-FGG-RAMSAFGFTTGSDVRPGDWYCTVGNCGTHNFASRSTCFKCGTFKDETGAGGGGGGIGGPAMFDADIMRSRVPGNGGRSSWKSGDWICTRIGCNEHNFASRMECFRCNAPRD 157
[Close]
BLAST of Vfaba.Tiffany.R1.2g206480.1 vs. Araport11
Match: AT3G15680.1 (| Ran BP2/NZF zinc finger-like superfamily protein | Chr3:5315437-5316048 FORWARD LENGTH=164 | 201606)

HSP 1 Score: 182.185 bits (461), Expect = 1.521e-59
Identity = 101/159 (63.52%), Postives = 114/159 (71.70%), Query Frame = 0 
Query:    1 MSRPGDWNCRSCQHMNFQRRESCQRCGDSKYGER----VDYGSVFGGIRGGSSFGLS-GSDVRLGDWYCGAGNCGAHNFASRLSCFKCGAFKDELAGGGYNN--------STDILLSRGFGGSTRPGWKSGDWICNRLGCNEHNFASRMECFKCSAPRD 146
            MSRPGDWNCRSC H+NFQRR+SCQRCGDS+ G      +D+G+ FGG R  S+FG + GSDVR GDWYC  GNCG HNFASR +CFKCG FKDE   GG             DI+ SR  G   R  WKSGDWIC R+GCNEHNFASRMECF+C+APRD
Sbjct:    1 MSRPGDWNCRSCSHLNFQRRDSCQRCGDSRSGPGGVGGLDFGN-FGG-RAMSAFGFTTGSDVRPGDWYCTVGNCGTHNFASRSTCFKCGTFKDETGAGGGGGGIGGPAMFDADIMRSRVPGNGGRSSWKSGDWICTRIGCNEHNFASRMECFRCNAPRD 157
[Close]
BLAST of Vfaba.Tiffany.R1.2g206480.1 vs. Araport11
Match: AT5G25490.2 (| Ran BP2/NZF zinc finger-like superfamily protein | Chr5:8876639-8877339 FORWARD LENGTH=170 | 201606)

HSP 1 Score: 153.295 bits (386), Expect = 3.826e-48
Identity = 89/163 (54.60%), Postives = 105/163 (64.42%), Query Frame = 0 
Query:    1 MSRPGDWNCRSCQHMNFQRRESCQRCGDSKYG-ERVDYGSVFGGIRGGSSFGL-SGSDVRLGDWYCGAGNCGAHNFASRLSCFKCGAFKDELAGGGYNNSTDIL---------------LSRGFGGSTRPGWKSGDWICNRLGCNEHNFASRMECFKCSAPRD 146
            M+RPGDWNCR C H+NFQRR+SCQRC + + G    D  S FGG    SSFG  +G DVR GDWYC  G+CG HNFA+R SCFKCGA KDE +      +T  +                S G GG+ R  WKSGDWIC R GCNEHNFASR ECF+C+AP++
Sbjct:    1 MNRPGDWNCRLCSHLNFQRRDSCQRCREPRPGGISTDLLSGFGGRPVSSSFGFNTGPDVRPGDWYCNLGDCGTHNFANRSSCFKCGAAKDEFSCSSAAATTGFMDMNVGPRRGLFGFGGSSSGGGGTGRSPWKSGDWICPRSGCNEHNFASRSECFRCNAPKE 163

HSP 2 Score: 57.7658 bits (138), Expect = 6.906e-11
Identity = 41/98 (41.84%), Postives = 49/98 (50.00%), Query Frame = 0 
Query:   58 RLGDWYCGAGNCGAHNFASRLSCFKCGAFKDELAGGGYNNSTDIL-------LSRGFGGSTRPGWKSGDWICNRLGCNEHNFASRMECFKCSAPRDTY 148
            R GDW C    C   NF  R SC +C     E   GG   STD+L       +S  FG +T P  + GDW CN   C  HNFA+R  CFKC A +D +
Sbjct:    3 RPGDWNCRL--CSHLNFQRRDSCQRC----REPRPGGI--STDLLSGFGGRPVSSSFGFNTGPDVRPGDWYCNLGDCGTHNFANRSSCFKCGAAKDEF 92
[Close]
BLAST of Vfaba.Tiffany.R1.2g206480.1 vs. Araport11
Match: AT5G25490.1 (| Ran BP2/NZF zinc finger-like superfamily protein | Chr5:8876639-8877339 FORWARD LENGTH=170 | 201606)

HSP 1 Score: 153.295 bits (386), Expect = 3.826e-48
Identity = 89/163 (54.60%), Postives = 105/163 (64.42%), Query Frame = 0 
Query:    1 MSRPGDWNCRSCQHMNFQRRESCQRCGDSKYG-ERVDYGSVFGGIRGGSSFGL-SGSDVRLGDWYCGAGNCGAHNFASRLSCFKCGAFKDELAGGGYNNSTDIL---------------LSRGFGGSTRPGWKSGDWICNRLGCNEHNFASRMECFKCSAPRD 146
            M+RPGDWNCR C H+NFQRR+SCQRC + + G    D  S FGG    SSFG  +G DVR GDWYC  G+CG HNFA+R SCFKCGA KDE +      +T  +                S G GG+ R  WKSGDWIC R GCNEHNFASR ECF+C+AP++
Sbjct:    1 MNRPGDWNCRLCSHLNFQRRDSCQRCREPRPGGISTDLLSGFGGRPVSSSFGFNTGPDVRPGDWYCNLGDCGTHNFANRSSCFKCGAAKDEFSCSSAAATTGFMDMNVGPRRGLFGFGGSSSGGGGTGRSPWKSGDWICPRSGCNEHNFASRSECFRCNAPKE 163

HSP 2 Score: 57.7658 bits (138), Expect = 6.906e-11
Identity = 41/98 (41.84%), Postives = 49/98 (50.00%), Query Frame = 0 
Query:   58 RLGDWYCGAGNCGAHNFASRLSCFKCGAFKDELAGGGYNNSTDIL-------LSRGFGGSTRPGWKSGDWICNRLGCNEHNFASRMECFKCSAPRDTY 148
            R GDW C    C   NF  R SC +C     E   GG   STD+L       +S  FG +T P  + GDW CN   C  HNFA+R  CFKC A +D +
Sbjct:    3 RPGDWNCRL--CSHLNFQRRDSCQRC----REPRPGGI--STDLLSGFGGRPVSSSFGFNTGPDVRPGDWYCNLGDCGTHNFANRSSCFKCGAAKDEF 92
[Close]
BLAST of Vfaba.Tiffany.R1.2g206480.1 vs. Araport11
Match: AT2G26695.2 (| Ran BP2/NZF zinc finger-like superfamily protein | Chr2:11365275-11365789 FORWARD LENGTH=138 | 201606)

HSP 1 Score: 134.035 bits (336), Expect = 6.928e-41
Identity = 68/142 (47.89%), Postives = 89/142 (62.68%), Query Frame = 0 
Query:    5 GDWNCRSCQHMNFQRRESCQRCGDSKYGERVDYGSVFGGIRGGSSFGLSGSDVRLGDWYCGAGNCGAHNFASRLSCFKCGAFKDELAGGGYNNSTDILLSRGFGGSTRPGWKSGDWICNRLGCNEHNFASRMECFKCSAPRD 146
            GDW C +CQH NF++RESCQ+CG  K          FGG+   S++  + ++V  GDWYCGA NCG+HN+ASR SC++CG  K E     Y     ++     G +  PGWK+GDW+C R+GC  HN+ASR ECFKC   RD
Sbjct:    6 GDWLCGACQHANFKKRESCQKCGYPK----------FGGVDV-STYLYNRTEVMAGDWYCGALNCGSHNYASRTSCYRCGMIKVEYTEQYYG--AQMVAYGNDGAACPPGWKTGDWVCPRVGCGVHNYASRAECFKCKTTRD 134
[Close]
BLAST of Vfaba.Tiffany.R1.2g206480.1 vs. Araport11
Match: AT2G26695.1 (| Ran BP2/NZF zinc finger-like superfamily protein | Chr2:11365275-11365789 FORWARD LENGTH=138 | 201606)

HSP 1 Score: 134.035 bits (336), Expect = 6.928e-41
Identity = 68/142 (47.89%), Postives = 89/142 (62.68%), Query Frame = 0 
Query:    5 GDWNCRSCQHMNFQRRESCQRCGDSKYGERVDYGSVFGGIRGGSSFGLSGSDVRLGDWYCGAGNCGAHNFASRLSCFKCGAFKDELAGGGYNNSTDILLSRGFGGSTRPGWKSGDWICNRLGCNEHNFASRMECFKCSAPRD 146
            GDW C +CQH NF++RESCQ+CG  K          FGG+   S++  + ++V  GDWYCGA NCG+HN+ASR SC++CG  K E     Y     ++     G +  PGWK+GDW+C R+GC  HN+ASR ECFKC   RD
Sbjct:    6 GDWLCGACQHANFKKRESCQKCGYPK----------FGGVDV-STYLYNRTEVMAGDWYCGALNCGSHNYASRTSCYRCGMIKVEYTEQYYG--AQMVAYGNDGAACPPGWKTGDWVCPRVGCGVHNYASRAECFKCKTTRD 134
[Close]
BLAST of Vfaba.Tiffany.R1.2g206480.1 vs. Araport11
Match: AT2G17975.1 (| zinc finger (Ran-binding) family protein | Chr2:7822238-7823970 REVERSE LENGTH=268 | 201606)

HSP 1 Score: 63.929 bits (154), Expect = 1.143e-12
Identity = 58/219 (26.48%), Postives = 82/219 (37.44%), Query Frame = 0 
Query:    1 MSRPGDWNCRSCQHMNFQRRESCQRCGDSKYGERVDYGSVFGG---------IRGGSSFGLSGSDV---------------RLGDWYCGAGNCGAHNFASRLSCFKCGAFKDELAGGGYNNSTDIL--------LSRGFGG--------STRPG-------------------------------WKSGDWICNRLGCNEHNFASRMECFKCSAPRDTY 148
            + R GDW C  C + N+  RE C++CG SK    +   ++ G           RG  S    GS +               R GDW C    CG HN++SR+ C KC      LA G    +++ L        L++G+          ++ PG                               W+ GDW+C    C  HN+ASR EC +C   RD  
Sbjct:   46 LPRIGDWICTGCTNNNYASREKCKKCGQSKEVAALSALAIPGASLQTHLHYFTRGPESHDQPGSLLAFSNATNQASVHKEWRSGDWIC---RCGFHNYSSRIQCKKCNEIA-PLALGTKRLASEALAHEWDSKRLNQGYTSMQTQSAIYASFPGMSLGRVSNWQLPLPFLQQHSTPALLGMGVKQWRDGDWMCT--NCKNHNYASRAECNRCKTTRDIL 258

HSP 2 Score: 63.929 bits (154), Expect = 1.178e-12
Identity = 51/163 (31.29%), Postives = 71/163 (43.56%), Query Frame = 0 
Query:    3 RPGDWNCRSCQHMNFQRRESCQRCGDSKYGERVDYGSVFGGIRGGSSFGLSGSDVRLGDWYCGAGNCGAHNFASRLSCFKCGAFKD-----ELAGGGYNNSTDI-LLSRGFGGSTRPG-----------------WKSGDWICNRLGCNEHNFASRMECFKCS 142
            R GDW C  C++ N+  R  C RC   +             I   ++   S    R+GDW C    C  +N+ASR  C KCG  K+      LA  G +  T +   +RG     +PG                 W+SGDWIC    C  HN++SR++C KC+
Sbjct:    5 REGDWECLGCRNRNYAFRSFCNRCKQPRL------------IMDNNTSPNSKWLPRIGDWICTG--CTNNNYASREKCKKCGQSKEVAALSALAIPGASLQTHLHYFTRGPESHDQPGSLLAFSNATNQASVHKEWRSGDWICR---CGFHNYSSRIQCKKCN 150
The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.2g206480.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A072UG31|A0A072UG31_MEDTR1.217e-9998.65Putative Zinc finger, RanBP2-type OS=Medicago trun... [more]
tr|A0A1S2YM71|A0A1S2YM71_CICAR1.134e-7681.08uncharacterized RNA-binding protein C17H9.04c OS=C... [more]
tr|C6T4M1|C6T4M1_SOYBN1.225e-7483.78Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A0B2STG1|A0A0B2STG1_GLYSO1.225e-7483.78Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|V7AU49|V7AU49_PHAVU7.892e-7478.38Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|A0A0S3T0R2|A0A0S3T0R2_PHAAN7.892e-7478.38Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0L9T9Q6|A0A0L9T9Q6_PHAAN7.892e-7478.38Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A1S3VC72|A0A1S3VC72_VIGRR7.892e-7478.38zinc finger Ran-binding domain-containing protein ... [more]
tr|A0A371HNR0|A0A371HNR0_MUCPR1.335e-7281.08SPAC17H9.04c (Fragment) OS=Mucuna pruriens OX=1576... [more]
tr|A0A151SH35|A0A151SH35_CAJCA1.700e-7278.38Uncharacterized protein OS=Cajanus cajan OX=3821 G... [more]
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BLAST of Vfaba.Tiffany.R1.2g206480.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Vfaba.Tiffany.R1.2g206480.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11)
Total hits: 7
Match NameE-valueIdentityDescription
AT3G15680.21.521e-5963.52| Ran BP2/NZF zinc finger-like superfamily protein... [more]
AT3G15680.11.521e-5963.52| Ran BP2/NZF zinc finger-like superfamily protein... [more]
AT5G25490.23.826e-4854.60| Ran BP2/NZF zinc finger-like superfamily protein... [more]
AT5G25490.13.826e-4854.60| Ran BP2/NZF zinc finger-like superfamily protein... [more]
AT2G26695.26.928e-4147.89| Ran BP2/NZF zinc finger-like superfamily protein... [more]
AT2G26695.16.928e-4147.89| Ran BP2/NZF zinc finger-like superfamily protein... [more]
AT2G17975.11.143e-1226.48| zinc finger (Ran-binding) family protein | Chr2:... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001876Zinc finger, RanBP2-typePFAMPF00641zf-RanBPcoord: 60..85
e-value: 8.6E-5
score: 21.8
coord: 116..145
e-value: 5.2E-8
score: 32.1
coord: 3..28
e-value: 4.7E-5
score: 22.6
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 116..147
score: 10.025985
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 58..89
score: 9.630757
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 3..32
score: 9.540421
NoneNo IPR availableGENE3D4.10.1060.10coord: 2..32
e-value: 2.0E-10
score: 41.8
coord: 111..147
e-value: 6.1E-12
score: 46.6
coord: 53..89
e-value: 2.0E-11
score: 45.0
NoneNo IPR availablePANTHERPTHR23111ZINC FINGER PROTEINcoord: 56..146
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 2..32
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 53..88
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 110..146

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Tiffany.R1.2g206480.1_tif_v1 ID=Vfaba.Tiffany.R1.2g206480.1_tif_v1; Name=Vfaba.Tiffany.R1.2g206480.1; organism=Vicia faba; type=mRNA; length=447bp
ATGAGTAGGCCAGGAGATTGGAACTGCAGGTCATGCCAACACATGAACTT
TCAAAGGCGCGAATCGTGTCAAAGATGTGGCGATTCAAAATACGGAGAAA
GAGTTGATTATGGATCAGTGTTTGGAGGAATTAGAGGAGGTTCTTCATTT
GGTTTAAGTGGTTCAGATGTTCGTCTAGGTGATTGGTATTGTGGTGCTGG
AAACTGTGGTGCACACAATTTTGCTAGTCGTTTAAGTTGCTTCAAATGTG
GTGCTTTCAAAGATGAATTAGCTGGTGGAGGATATAACAATAGTACTGAT
ATTTTGCTTTCAAGAGGCTTTGGTGGAAGTACTAGACCTGGATGGAAATC
GGGTGACTGGATTTGTAACAGATTAGGATGCAATGAGCACAACTTTGCAA
GCAGAATGGAATGTTTCAAATGCAGTGCACCAAGAGACACCTACTAG
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protein sequence of Vfaba.Tiffany.R1.2g206480.1_tif_v1

>Vfaba.Tiffany.R1.2g206480.1_tif_v1 ID=Vfaba.Tiffany.R1.2g206480.1_tif_v1; Name=Vfaba.Tiffany.R1.2g206480.1_tif_v1; organism=Vicia faba; type=polypeptide; length=148bp
MSRPGDWNCRSCQHMNFQRRESCQRCGDSKYGERVDYGSVFGGIRGGSSF
GLSGSDVRLGDWYCGAGNCGAHNFASRLSCFKCGAFKDELAGGGYNNSTD
ILLSRGFGGSTRPGWKSGDWICNRLGCNEHNFASRMECFKCSAPRDTY
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mRNA from alignment at chr2:1644965517..1644966134+

Legend: mRNAexonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Tiffany.R1.2g206480.1_tif_v1 ID=Vfaba.Tiffany.R1.2g206480.1_tif_v1; Name=Vfaba.Tiffany.R1.2g206480.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr2:1644965517..1644966134+ (Vicia faba
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR036443Znf_RanBP2_sf