Vfaba.Tiffany.R1.5g092480.1

Transcript Overview
NameVfaba.Tiffany.R1.5g092480.1
Unique NameVfaba.Tiffany.R1.5g092480.1_tif_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length1059
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr5chromosomechr5:819416762..819418519 -Vicia faba cv. Tiffany genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
tifzwsR442Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
astifL439Vigna angularis Jingnong 6 genome v1.1Vigna angularis
astifL504Vigna angularis Jingnong 6 genome v1.1Vigna angularis
catifL221Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
catifL348Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
crtifL274Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cctifL0770Cajanus cajan Asha genome v1.0Cajanus cajan
pvtifL054Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tiftifL203Vicia faba cv. Tiffany genome v1.0Vicia faba
pstifL243Pisum sativum Cameor genome v1aPisum sativum
pvtifL652Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvuR581Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvfhR361Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuR648Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caitifL281Cicer arietinum ICC 4958 genome v2Cicer arietinum
antifL0447Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL0642Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL0850Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
tifvrvR561Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvrvR607Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvuaR488Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
tifvuaR545Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
tifvssR641Vicia sativa cv. Studenica genome v1.0Vicia sativa
tifvssR659Vicia sativa cv. Studenica genome v1.0Vicia sativa
cantifL182Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cantifL289Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
rna-XM_014639408.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Psat3g068040.2Pisum sativum Cameor genome v1aPisum sativum
evm.model.Chr01.1221.1.62113172Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
evm.model.Chr07.1780Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Cr_05952.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-XM_014656811.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg32791.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Ca_07387.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
LR48_mrnaVigan02g023700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigun01g125400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
LR48_mrnaVigan03g223000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-KK1_009838Cajanus cajan Asha genome v1.0Cajanus cajan
Ca_07320Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Psat03G0233500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigun07g024500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-XM_004493538.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-TanjilR_06914Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_02846Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.5g114280.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.5g092480Vfaba.Tiffany.R1.5g092480_tif_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.5g092480.1_tif_v1-exonVfaba.Tiffany.R1.5g092480.1_tif_v1-exon-chr5_tif_v1:819416762..819417396Vicia fabaexon
Vfaba.Tiffany.R1.5g092480.1_tif_v1-exonVfaba.Tiffany.R1.5g092480.1_tif_v1-exon-chr5_tif_v1:819417489..819417547Vicia fabaexon
Vfaba.Tiffany.R1.5g092480.1_tif_v1-exonVfaba.Tiffany.R1.5g092480.1_tif_v1-exon-chr5_tif_v1:819417931..819417998Vicia fabaexon
Vfaba.Tiffany.R1.5g092480.1_tif_v1-exonVfaba.Tiffany.R1.5g092480.1_tif_v1-exon-chr5_tif_v1:819418223..819418519Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.5g092480.1_tif_v1-cdsVfaba.Tiffany.R1.5g092480.1_tif_v1-cds-chr5_tif_v1:819416762..819417396Vicia fabaCDS
Vfaba.Tiffany.R1.5g092480.1_tif_v1-cdsVfaba.Tiffany.R1.5g092480.1_tif_v1-cds-chr5_tif_v1:819417489..819417547Vicia fabaCDS
Vfaba.Tiffany.R1.5g092480.1_tif_v1-cdsVfaba.Tiffany.R1.5g092480.1_tif_v1-cds-chr5_tif_v1:819417931..819417998Vicia fabaCDS
Vfaba.Tiffany.R1.5g092480.1_tif_v1-cdsVfaba.Tiffany.R1.5g092480.1_tif_v1-cds-chr5_tif_v1:819418223..819418519Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.5g092480.1_tif_v1Vfaba.Tiffany.R1.5g092480.1_tif_v1Vicia fabapolypeptide
Vfaba.Tiffany.R1.5g092480.1_tif_v1Vfaba.Tiffany.R1.5g092480.1_tif_v1-proteinVicia fabapolypeptide


Homology
BLAST of Vfaba.Tiffany.R1.5g092480.1 vs. UniProtKB/TrEMBL
Match: tr|G7KVE9|G7KVE9_MEDTR (Growth-regulating factor OS=Medicago truncatula OX=3880 GN=11437939 PE=3 SV=1)

HSP 1 Score: 439.499 bits (1129), Expect = 1.220e-151
Identity = 250/360 (69.44%), Postives = 278/360 (77.22%), Query Frame = 0
Query:    1 MRIRKRQAILSSSLHLS-----DPNQFNRSPLMVQLSDAAHAHTQPKPCSSSTSLLVSAGSTLDLYQPSDQTLPLIGKLNNGYDYPSTIQLSGVHKHHTKQHPLEEKVRVEGKEGGDFGENKSNHISKGDILVDSQLLPSSTTFVQDGRWCEGEKAIPLKKRKGRLENVGMDSDDSK--KTKMKTKLNKRCSMRKDEDGDEQSETKVNDMKKRATKRGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRS-IGFSTTATTTTTVAPSNVVDRDTSASSSNSDLVKKITSGNDIVDKLENDDDEKKPVIMVKKRMKLGMVKARSMSSLLGQTDNKVVVVDENNK 352
            MRIRKRQ + SSS  LS     DP+  N+SP++VQ  D       PKPCSS +   VSAG +LD YQPSDQTLPLIGKLNNGYDYPS+++ SGVHK H K  PL++KVR E KE  D G NKSNH SKGDILV SQ LPSS+TF +D  W EGEK IPLKKRKGR +N GM+ +DSK  K KM TK+NK+CS+ KD   DE+SETKVN +KK+ TKRGSA+MEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRS IGFS     TTT  P+N VD   SASSSNSDL KKI   ND  D L N DDEKKPV++ KKRMKLGMVKARSM SLLGQTDNK VVV+ENNK
Sbjct:    1 MRIRKRQLLFSSSDSLSPLHLSDPHLINQSPVVVQQGDG------PKPCSSQSQEHVSAGLSLDRYQPSDQTLPLIGKLNNGYDYPSSVEESGVHKQHNKLDPLDKKVRGEEKESDDSGGNKSNHTSKGDILVVSQALPSSSTFSEDEIWLEGEKTIPLKKRKGRFQNNGMEGNDSKKVKAKMNTKMNKKCSLGKD---DEESETKVN-IKKKVTKRGSAVMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRSNIGFS-----TTTTEPNNAVD---SASSSNSDLEKKIIDEND--DTLGN-DDEKKPVVIAKKRMKLGMVKARSMISLLGQTDNK-VVVNENNK 338          
BLAST of Vfaba.Tiffany.R1.5g092480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6MHP0|A0A2Z6MHP0_TRISU (Growth-regulating factor OS=Trifolium subterraneum OX=3900 GN=TSUD_332730 PE=3 SV=1)

HSP 1 Score: 428.713 bits (1101), Expect = 3.664e-147
Identity = 264/376 (70.21%), Postives = 297/376 (78.99%), Query Frame = 0
Query:    1 MRIRKRQAILSSSLHLS-----DPNQFNRSPLMVQLSDAAHAHTQPKPCSSSTSLLVSAGSTLDLYQPSDQTLPLIGKLNNGYDYPSTIQLSGVHKHHTKQH------------PLEE-KVRVEGKEGGDFGENKSNHISKGDILVDSQLLPSST-TFVQDGRWCEGEKAIPLKKRKGRLENVGMDSDDS---KKTKMKTKLNKRCSMRKDEDGDEQSETKVNDMKKRATKRGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRS-IGFSTTATTTTTVAPSNVVDRDTSASSSNSDLVKKITSGNDIVDKLENDDDEKKPVIMV-KKRMKLGMVKARSMSSLLGQTDNKVVVVDENNK 352
            MRIRKRQAI SSS  +S     DP+QFNRSP+MVQL D A            T L +SAGS+LD YQPSDQTLPLIGKLNNG+ + S+++ S VHKHH KQ             PL++ KVR +GKE G+FG+NKSNHISKGDILV SQ+LPSS+ TF QDGRWCEGEKAIPLKKRKGRLENVGM+S+DS    KTKMKTK+NK CS+ KD++ DE+SETKVN +KKRATKRGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVR+RS IGFS      T VAP+NVVD D SAS+SN DL KKI     IVD   ++DDEKKPV+M+ KKRMKLGMVKARSMSSLLGQTDNKV +VDENNK
Sbjct:    1 MRIRKRQAIFSSSESISSLHLSDPHQFNRSPVMVQLGDEA------------TQLHLSAGSSLDRYQPSDQTLPLIGKLNNGHGFLSSMEESQVHKHHNKQEQGQGQEQQQEQDPLDDDKVREQGKESGNFGDNKSNHISKGDILVCSQVLPSSSSTFAQDGRWCEGEKAIPLKKRKGRLENVGMESNDSGKKMKTKMKTKMNKNCSVEKDDE-DEESETKVNTIKKRATKRGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRSRSNIGFS------TNVAPNNVVDLDHSASNSN-DLEKKII----IVDDELDNDDEKKPVVMIAKKRMKLGMVKARSMSSLLGQTDNKVALVDENNK 352          
BLAST of Vfaba.Tiffany.R1.5g092480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3PR77|A0A2K3PR77_TRIPR (Growth-regulating factor OS=Trifolium pratense OX=57577 GN=L195_g014523 PE=3 SV=1)

HSP 1 Score: 425.246 bits (1092), Expect = 6.447e-146
Identity = 257/369 (69.65%), Postives = 292/369 (79.13%), Query Frame = 0
Query:    1 MRIRKRQAILSSSLHLS-----DPNQFNRSPLMVQLSDAAHAHTQPKPCSSSTSLLVSAGSTLDLYQPSDQTLPLIGKLNNGYDYPSTIQLSGVHKHHTKQH--PLEE-KVRVEGKEGGDFGENKSNHISKGDILVDSQLLPSST--TFVQDGRWCEGEKAIPLKKRKGRLENVGMDSDD----SKKTKMKTKLNKRCSMRKDEDGDEQSETKVND-MKKRATKRGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRS-IGFSTTATTTTTVAPSNVVDRDTSASSSNSDLVKKITSGNDIVDKLENDDDEKKPVIMV-KKRMKLGMVKARSMSSLLGQTDNKVVVVDENNK 352
            MRIRKRQAI SSS  +S     DP+QFNRSP+MVQL +A H              +VS  STLD +QPSDQTLPLIGKLNNG+DY S I+ + VHK + KQ   PL++ KVR +GKE G+FG+NKSNHISKGDILV SQ+LPSS+  TFVQDGRWCEGEKAIPLKKRKG LENVGM+S+D      KTKMKTK+NK CS+ KD D DE+SETKVN+ +KKRATKRGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVR+RS +GFS      T VAP+NV+D     S+SNS+L KKI      VD+L+N DDEKKPV+M+ KKRMKLGMVKARSMSSLLGQTDNKV +VDENNK
Sbjct:    1 MRIRKRQAIFSSSESISSLHLSDPHQFNRSPVMVQLGEATH--------------VVSPASTLDRFQPSDQTLPLIGKLNNGHDYLSGIEETEVHKPNNKQEQDPLDDDKVREQGKESGNFGDNKSNHISKGDILVVSQVLPSSSSSTFVQDGRWCEGEKAIPLKKRKGGLENVGMESNDDTGKKMKTKMKTKMNKNCSVGKD-DEDEESETKVNNNIKKRATKRGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRSRSNLGFS------TNVAPNNVLDH----SASNSNLEKKIID----VDELDN-DDEKKPVVMIAKKRMKLGMVKARSMSSLLGQTDNKVALVDENNK 339          
BLAST of Vfaba.Tiffany.R1.5g092480.1 vs. UniProtKB/TrEMBL
Match: tr|G7KVF0|G7KVF0_MEDTR (Growth-regulating factor OS=Medicago truncatula OX=3880 GN=11437939 PE=3 SV=2)

HSP 1 Score: 405.601 bits (1041), Expect = 4.306e-138
Identity = 250/364 (68.68%), Postives = 276/364 (75.82%), Query Frame = 0
Query:    1 MRIRKRQAILSSSLHLS-----DPNQFNRSPLMVQLSDAAHAHTQPKPCSSSTSLL---VSAGSTLDLYQPSDQTLPLIGKLNNGYDYPSTIQLSGVHKHHTKQHPLEEKVRVEGKEGGDFGENKSNHISKGDILVDSQLLPSSTTFVQDGRWCEGEKAIPLKKRKGRLENVGMDSDDSKKTKMKTKLNKRC---SMRKDEDGDEQSETKVNDMKKRATKRGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRS-IGFSTTATTTTTVAPSNVVDRDTSASSSNSDLVKKITSGNDIVDKLENDDDEKKPVIMVKKRMKLGMVKARSMSSLLGQTDNKVVVVDENNK 352
            MRIRKRQ + SSS  LS     DP+  N+SP++VQL +       PKPCSS+  L     SAG +LD YQPSDQTLPLIGKLNNG+DYPS ++ SGVHK H K  PLEEKVR E KE     ENKSN+IS GDILV SQ+LPSS+TF QDGRWCEGEKA PLKKRKGR EN+ M+ +DSKK K KT         S+ KD D DE+SE KVN +KK+ TKRGSA+MEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRS IGFS     TTT  P+N VD   SASSSNSDL KKI   ND  D L N DDEKKPV++ KKRMKLGMVKARSMSSLLGQTDNK VVV+ENNK
Sbjct:    1 MRIRKRQLLFSSSDSLSPLNLSDPHLMNKSPMVVQLGEG------PKPCSSTPVLSREHASAGLSLDHYQPSDQTLPLIGKLNNGHDYPSGVEESGVHKQHNKLDPLEEKVREEEKE--SGEENKSNNISNGDILVVSQVLPSSSTFEQDGRWCEGEKAFPLKKRKGRFENIAMEGNDSKKVKAKTNTKMNKKKGSLGKD-DEDEESERKVN-IKKKVTKRGSAVMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRSNIGFS-----TTTTEPNNAVD---SASSSNSDLEKKIIDEND--DTLGN-DDEKKPVVIAKKRMKLGMVKARSMSSLLGQTDNK-VVVNENNK 342          
BLAST of Vfaba.Tiffany.R1.5g092480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XRX4|A0A1S2XRX4_CICAR (Growth-regulating factor OS=Cicer arietinum OX=3827 GN=LOC101510679 PE=3 SV=1)

HSP 1 Score: 374.785 bits (961), Expect = 7.181e-126
Identity = 238/370 (64.32%), Postives = 271/370 (73.24%), Query Frame = 0
Query:    1 MRIRKRQAILSSS------LHLSDPNQFNRSPLMVQLSDAAHAHTQPKPCSSSTSLLVSAGSTLDLYQPSDQTLPLIGKLNNGYDYPSTIQLSGVHKHHTKQHPLEEKVRVEGKEGGDFGENKSNHISKGDILVDSQLLPSS-TTFVQDGRWCEGEKAIPLKKRKGRLEN--VGMDSDDSKKTKMKTKLNKR----CSMRKDEDGDEQSETKVNDMKKRATKRGSAL-MEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRSIGFSTTATTTTTVAPSNVVDRDTSASSSNSDLVKKI---TSGNDIVDKLENDDDEKKPVIMVKKRMKLGMVKARSMSSLLGQTDNKVVVV-DENNK 352
            MRIRKRQA+ SS+      LHLSDPN   RSP++VQL D  HAHT PK         VS  S+LD YQPSDQTLPLIGKLNNG DYPS I+ SG HK H K  PL+EKVR E KE G+  ENKSNHISKGDILV SQ+LPSS TTF QDGRWCEGEKAIPLKKR+GR EN  +   ++DSKK      +  +    CS  KDE+ +E+S +K    KKR  KRGSA+ MEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRSIG   + TTTTT APS +   + +ASSSNSD+V+K     +GND  DK +N D++K+     KKR+KLGMVKARS+SSLLGQ DNKV  V DENNK
Sbjct:    1 MRIRKRQALFSSTSESLTPLHLSDPNLIIRSPVVVQLGDDTHAHTVPK--------HVSPASSLDRYQPSDQTLPLIGKLNNGCDYPSGIEESGTHKQHNKLDPLDEKVREEEKESGESRENKSNHISKGDILVVSQVLPSSSTTFAQDGRWCEGEKAIPLKKRRGRFENDKILESNNDSKKVVKGKMMKTKMNKKCSTVKDEEDEEESGSK---NKKRMRKRGSAVVMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRSIGIGFSNTTTTTTAPS-LTKNNINASSSNSDVVEKRMMNCAGNDD-DKTDNFDEKKQ-----KKRVKLGMVKARSISSLLGQPDNKVAPVGDENNK 352          
BLAST of Vfaba.Tiffany.R1.5g092480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072U1V7|A0A072U1V7_MEDTR (Growth-regulating factor OS=Medicago truncatula OX=3880 GN=11437939 PE=3 SV=1)

HSP 1 Score: 331.643 bits (849), Expect = 2.116e-110
Identity = 187/256 (73.05%), Postives = 205/256 (80.08%), Query Frame = 0
Query:  100 EEKVRVEGKEGGDFGENKSNHISKGDILVDSQLLPSSTTFVQDGRWCEGEKAIPLKKRKGRLENVGMDSDDSKK--TKMKTKLNKRCSMRKDEDGDEQSETKVNDMKKRATKRGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRS-IGFSTTATTTTTVAPSNVVDRDTSASSSNSDLVKKITSGNDIVDKLENDDDEKKPVIMVKKRMKLGMVKARSMSSLLGQTDNKVVVVDENNK 352
            ++KVR E KE  D G NKSNH SKGDILV SQ LPSS+TF +D  W EGEK IPLKKRKGR +N GM+ +DSKK   KM TK+NK+CS+ KD   DE+SETKVN +KK+ TKRGSA+MEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRS IGFSTT T      P+N VD   SASSSNSDL KKI   ND  D L N DDEKKPV++ KKRMKLGMVKARSM SLLGQTDNK VVV+ENNK
Sbjct:    8 DKKVRGEEKESDDSGGNKSNHTSKGDILVVSQALPSSSTFSEDEIWLEGEKTIPLKKRKGRFQNNGMEGNDSKKVKAKMNTKMNKKCSLGKD---DEESETKVN-IKKKVTKRGSAVMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRSNIGFSTTTT-----EPNNAVD---SASSSNSDLEKKIIDEND--DTLGN-DDEKKPVVIAKKRMKLGMVKARSMISLLGQTDNK-VVVNENNK 247          
BLAST of Vfaba.Tiffany.R1.5g092480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072U3E6|A0A072U3E6_MEDTR (Growth-regulating factor OS=Medicago truncatula OX=3880 GN=11437939 PE=3 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 2.866e-104
Identity = 179/241 (74.27%), Postives = 194/241 (80.50%), Query Frame = 0
Query:  116 NKSNHISKGDILVDSQLLPSSTTFVQDGRWCEGEKAIPLKKRKGRLENVGMDSDDSKKTKMKTKLNKRC---SMRKDEDGDEQSETKVNDMKKRATKRGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRS-IGFSTTATTTTTVAPSNVVDRDTSASSSNSDLVKKITSGNDIVDKLENDDDEKKPVIMVKKRMKLGMVKARSMSSLLGQTDNKVVVVDENNK 352
            NKSN+IS GDILV SQ+LPSS+TF QDGRWCEGEKA PLKKRKGR EN+ M+ +DSKK K KT         S+ KD D DE+SE KVN +KK+ TKRGSA+MEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRS IGFSTT T      P+N VD   SASSSNSDL KKI   ND  D L N DDEKKPV++ KKRMKLGMVKARSMSSLLGQTDNK VVV+ENNK
Sbjct:   26 NKSNNISNGDILVVSQVLPSSSTFEQDGRWCEGEKAFPLKKRKGRFENIAMEGNDSKKVKAKTNTKMNKKKGSLGKD-DEDEESERKVN-IKKKVTKRGSAVMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRSNIGFSTTTT-----EPNNAVD---SASSSNSDLEKKIIDEND--DTLGN-DDEKKPVVIAKKRMKLGMVKARSMSSLLGQTDNK-VVVNENNK 252          
BLAST of Vfaba.Tiffany.R1.5g092480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4P1QUZ8|A0A4P1QUZ8_LUPAN (Growth-regulating factor OS=Lupinus angustifolius OX=3871 GN=TanjilG_06915 PE=3 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 2.184e-97
Identity = 188/373 (50.40%), Postives = 231/373 (61.93%), Query Frame = 0
Query:    1 MRIRKRQAIL----SSSLHLSDPNQFNRSPLMVQLSDAAHAHTQPKPCSSSTSLLVSAGSTLDLYQPSDQTLPLIGKLNNGYDYPSTIQLSGVHKHHTKQHPLEEKVRVEGKEGGDFGENKSNHISKGDILVDSQLL---PSSTTFVQDGRWCEGEKAIPLKKRKGRLENVGMDSDDSKK--TKMKTKLNKRCS-------------MRKDEDGDEQSETKVNDMKKRATKRGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRSIGFSTTATTTTTVAPSNVVDRDTSASSSNSDLVKKITSGNDIVDKLE-NDDDEKKPVIMVKKRMKLGMVKARSMSSLLGQTDNKVVVVDEN 350
            MRIRK Q I     SS++ LSDPN  NR P++VQL+DAA      +  S++      A S LD YQP DQTLP IG+  N YD  S I  SG H+ H KQ  L+E +R   KE GD  E  ++H  KG I+  S+++   PSS +  QDGRW EGEKAI LKKR+G  E+ G +   SKK  +KMKTK+NK+CS             + +D+  + +   +VN+   +   +GSA+MEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRSI       +TT     NV D  +   S  S + +K T    + D      DDEKK VI+ K+RMKLGMVKARS+SSLLGQT N  VV   N
Sbjct:    1 MRIRKSQVIFPSYFSSTVPLSDPNLMNRLPVVVQLNDAATTTITTQHASAA----AEAPSNLDCYQPFDQTLPPIGETTNCYDL-SGIDESGPHRQHNKQQQLDEDIR--SKESGDSVEKGNSHFRKG-IIFGSEIVALPPSSLSSTQDGRWWEGEKAILLKKRRGIFEDNGKNLGSSKKMNSKMKTKMNKKCSTHNDNDDDDDIDSVEEDKSHETKKYDRVNNKVGKKKAKGSAVMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRSIA------STTESDHKNVHDNMSEPISVASSIPEKKTKCVSVSDDYPLVSDDEKKSVIVTKRRMKLGMVKARSISSLLGQTKNNAVVHKAN 359          
BLAST of Vfaba.Tiffany.R1.5g092480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4P1QV44|A0A4P1QV44_LUPAN (Growth-regulating factor OS=Lupinus angustifolius OX=3871 GN=TanjilG_06914 PE=3 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 8.591e-95
Identity = 194/373 (52.01%), Postives = 234/373 (62.73%), Query Frame = 0
Query:    1 MRIRKRQAI----LSSSLHLSDPNQFNRSPLMVQLSDAAHAHTQPKPCSSSTSLLVSAGSTLDLYQPSDQTLPLIGKLNNGYDYPSTIQLSGVHKHHTKQHPLEEKVRVEGKEGGDFGENKSNHISKG-----DILVDSQLLPSSTTFVQDGRWCEGEKAIPLKKRKGRLENVGMDSDDSKKTKMKTKLNKRCSMRKDEDGDE---------QSETK----VNDMKKRATKRGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRSIGFSTTATTTTTVAPSNVVDRDTSASSSNSDLVKKITSGNDIVDKLE-NDDDEKKPVIMVKKRMKLGMVKARSMSSLLGQTDNKVVVVDEN 350
            MRIRK Q +    LSS++ +SDPN  NRSP+MVQL+D     T P   S ++   V A S  D YQP DQ LP IG+  NGYD  S I   G H+ H KQ PL+E  R +  E  D  E  ++H  KG     +I+    L PSS +  QDGRWC+GEKAIPLKKR+G  EN G +S+   K KMKTK+NK+CS R D++ D+           ETK    VN+   +   +GSA+MEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRSI       +TT     NV D      S+ S + +K T    + D      DDEKK VI+ K+RMKLGMVKARS+SSLLGQT N VVV ++N
Sbjct:    1 MRIRKNQGLFPSYLSSTVPISDPNLVNRSPVMVQLNDVTT--TTPHHDSPAS---VQAPSNWDHYQPFDQILPTIGEKTNGYDL-SGIGECGPHRQHNKQQPLDEDERKQ--ESSDSKEKGNSHFRKGVILGSEIVAHEVLPPSSLSSTQDGRWCDGEKAIPLKKRRGSFENNG-NSNKKMKAKMKTKMNKKCSTRNDDNEDDIDWVDEEDKSRETKKLDRVNNNVGKKKAKGSAVMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRSIA------STTESDHKNVHDNMCEPISAASSIPEKKTKCISVSDDYPLVSDDEKKSVIVTKRRMKLGMVKARSISSLLGQTKNNVVVHEDN 358          
BLAST of Vfaba.Tiffany.R1.5g092480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445LBX9|A0A445LBX9_GLYSO (Growth-regulating factor OS=Glycine soja OX=3848 GN=D0Y65_007171 PE=3 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 2.392e-92
Identity = 201/382 (52.62%), Postives = 236/382 (61.78%), Query Frame = 0
Query:    1 MRIRKRQAILSSSL---HLSDPNQFNRSPLMVQLSDAAHAHTQPKPCSSSTSLLVSAGSTLDLYQPSDQTLPLIGKLNNGYDYPSTIQLSGVHKHHTKQHPLEEKVRVEGKEGGDFGENKSNHISKGDIL----VDSQLLPS-STTFVQDGRWCEGEKAIPLKKRKGRLENVGMD------SDDSKKTKMKTKLNKRCSM-RKDEDGDEQS----------ETKVNDM-KKRATKRGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRSIGFSTTATTTTTVAPSNVVDRDTSASSSNSDLVKKITSGNDIVDKLE--NDDDEKKPVIMV---KKRMKLGMVKARSMSSLLGQTDNKVVVVDENN 351
            MRIRKR A+  SSL    LSDP+  NRSP++VQLSDA     +    SS+     +  STLD +QPSDQ LPLIGK +NG D PS I  SG H+ H KQ PL+E VR E + G D GE K NHI KG         ++LLP  S++  QDGRW EGEKAIPLKKR+G  E    +      S    K KMKTK+NK+CS  R +ED   +           + +VN + KKRA  RGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVR+RSI  ST        AP  V        SS+S     +    + VD  E   + +EKKP I++   KKRMKLGMVKARS+SSLLGQT N +  V   N
Sbjct:    1 MRIRKRPALFPSSLSPLRLSDPHLINRSPVVVQLSDATSTAPKLSFSSSAHHAAFAHPSTLDRFQPSDQPLPLIGKQSNGSDDPSGIGESGAHRQHNKQDPLDEVVRRE-ESGEDSGE-KGNHIRKGRTFGSEKTQAELLPPLSSSSTQDGRWYEGEKAIPLKKRRGNFEENNNNNNAAAHSKKMMKAKMKTKMNKKCSTPRNNEDSTGEEEVKKKVEETIKVEVNVVSKKRA--RGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRSRSIIAST--------APKEVHVHHVPHPSSSSPSFCSLEKQIECVDDAEPFGEKEEKKPGIIMTSTKKRMKLGMVKARSISSLLGQTSNHIAAVAHEN 370          
BLAST of Vfaba.Tiffany.R1.5g092480.1 vs. Araport11
Match: AT2G42040.1 (| WRC protein | Chr2:17543282-17545063 FORWARD LENGTH=269 | 201606)

HSP 1 Score: 91.6633 bits (226), Expect = 5.663e-21
Identity = 44/55 (80.00%), Postives = 48/55 (87.27%), Query Frame = 0
Query:  199 KVNDMKKRATKRGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSM 253
            ++N  KK+A K G  L EGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGR+RSM
Sbjct:  148 RINKGKKKAKKSGGGLEEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRVRSM 202          
The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.5g092480.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|G7KVE9|G7KVE9_MEDTR1.220e-15169.44Growth-regulating factor OS=Medicago truncatula OX... [more]
tr|A0A2Z6MHP0|A0A2Z6MHP0_TRISU3.664e-14770.21Growth-regulating factor OS=Trifolium subterraneum... [more]
tr|A0A2K3PR77|A0A2K3PR77_TRIPR6.447e-14669.65Growth-regulating factor OS=Trifolium pratense OX=... [more]
tr|G7KVF0|G7KVF0_MEDTR4.306e-13868.68Growth-regulating factor OS=Medicago truncatula OX... [more]
tr|A0A1S2XRX4|A0A1S2XRX4_CICAR7.181e-12664.32Growth-regulating factor OS=Cicer arietinum OX=382... [more]
tr|A0A072U1V7|A0A072U1V7_MEDTR2.116e-11073.05Growth-regulating factor OS=Medicago truncatula OX... [more]
tr|A0A072U3E6|A0A072U3E6_MEDTR2.866e-10474.27Growth-regulating factor OS=Medicago truncatula OX... [more]
tr|A0A4P1QUZ8|A0A4P1QUZ8_LUPAN2.184e-9750.40Growth-regulating factor OS=Lupinus angustifolius ... [more]
tr|A0A4P1QV44|A0A4P1QV44_LUPAN8.591e-9552.01Growth-regulating factor OS=Lupinus angustifolius ... [more]
tr|A0A445LBX9|A0A445LBX9_GLYSO2.392e-9252.62Growth-regulating factor OS=Glycine soja OX=3848 G... [more]
back to top
BLAST of Vfaba.Tiffany.R1.5g092480.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Vfaba.Tiffany.R1.5g092480.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G42040.15.663e-2180.00| WRC protein | Chr2:17543282-17545063 FORWARD LEN... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014977WRC domainPFAMPF08879WRCcoord: 216..256
e-value: 1.3E-15
score: 56.7
IPR014977WRC domainPROSITEPS51667WRCcoord: 214..258
score: 21.266197
NoneNo IPR availablePANTHERPTHR34122EXPRESSED PROTEIN-RELATEDcoord: 110..337

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Tiffany.R1.5g092480.1_tif_v1 ID=Vfaba.Tiffany.R1.5g092480.1_tif_v1; Name=Vfaba.Tiffany.R1.5g092480.1; organism=Vicia faba; type=mRNA; length=1059bp
ATGAGGATCCGTAAAAGACAAGCTATTCTCTCTTCTTCTCTGCATCTCTC
AGATCCCAACCAGTTTAACCGGTCACCGCTGATGGTGCAACTCAGCGACG
CTGCTCATGCTCACACACAACCGAAGCCTTGTTCTTCTTCAACTTCGTTG
CTTGTTTCAGCTGGTTCCACCTTGGATCTTTATCAGCCGTCTGATCAAAC
ACTCCCACTGATCGGGAAACTAAACAACGGCTACGATTACCCATCCACCA
TCCAACTCAGTGGGGTACACAAACACCACACCAAGCAACACCCTTTGGAA
GAGAAGGTTAGAGTGGAAGGGAAAGAGGGTGGAGACTTTGGAGAGAACAA
AAGTAATCATATCAGCAAAGGAGATATCTTGGTTGATTCTCAACTCTTGC
CATCATCAACTACTTTTGTTCAAGATGGGAGATGGTGTGAGGGAGAGAAA
GCTATTCCATTAAAGAAAAGGAAAGGAAGGTTGGAGAATGTTGGTATGGA
CAGTGATGATAGTAAGAAAACAAAGATGAAGACGAAGTTGAATAAGAGAT
GTTCTATGAGAAAGGACGAAGATGGAGATGAACAAAGTGAAACAAAAGTG
AATGATATGAAGAAGAGGGCGACGAAAAGGGGAAGTGCACTGATGGAAGG
TTCGCGGTGCAGTCGTGTTAATGGAAGAGGATGGAGGTGTTGTCAACAAA
CACTAGTTGGTTATTCTCTTTGTGAGCATCATTTAGGGAAGGGAAGGTTG
AGAAGCATGACAAGTGTTCGAAATAGATCTATCGGATTTTCTACTACTGC
TACTACCACTACTACTGTTGCACCAAGCAATGTTGTTGATAGAGATACTA
GTGCTTCATCTTCTAATTCCGATCTTGTAAAGAAAATCACTTCTGGGAAT
GATATTGTTGATAAGTTGGAGAATGATGATGATGAGAAGAAGCCGGTGAT
AATGGTTAAGAAGAGAATGAAACTTGGAATGGTTAAAGCACGATCCATGA
GCAGCTTATTGGGACAGACAGACAACAAGGTTGTTGTTGTTGACGAGAAT
AACAAGTAA
back to top

protein sequence of Vfaba.Tiffany.R1.5g092480.1_tif_v1

>Vfaba.Tiffany.R1.5g092480.1_tif_v1 ID=Vfaba.Tiffany.R1.5g092480.1_tif_v1; Name=Vfaba.Tiffany.R1.5g092480.1_tif_v1; organism=Vicia faba; type=polypeptide; length=352bp
MRIRKRQAILSSSLHLSDPNQFNRSPLMVQLSDAAHAHTQPKPCSSSTSL
LVSAGSTLDLYQPSDQTLPLIGKLNNGYDYPSTIQLSGVHKHHTKQHPLE
EKVRVEGKEGGDFGENKSNHISKGDILVDSQLLPSSTTFVQDGRWCEGEK
AIPLKKRKGRLENVGMDSDDSKKTKMKTKLNKRCSMRKDEDGDEQSETKV
NDMKKRATKRGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRL
RSMTSVRNRSIGFSTTATTTTTVAPSNVVDRDTSASSSNSDLVKKITSGN
DIVDKLENDDDEKKPVIMVKKRMKLGMVKARSMSSLLGQTDNKVVVVDEN
NK
back to top

mRNA from alignment at chr5:819416762..819418519-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Tiffany.R1.5g092480.1_tif_v1 ID=Vfaba.Tiffany.R1.5g092480.1_tif_v1; Name=Vfaba.Tiffany.R1.5g092480.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr5:819416762..819418519- (Vicia faba
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR014977WRC_dom