Vfaba.Hedin2.R1.1g035840.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A251U753|A0A251U753_HELAN (Histone H2A OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr08g0227831 PE=3 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 3.895e-80 Identity = 124/139 (89.21%), Postives = 131/139 (94.24%), Query Frame = 0 Query: 2 AGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKKA 140
A GRK GGPRKK+VTRSVKAGLQFPVGRIGRFLKKGRYAQRVG+GAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI PRH+LLA+RND+ELGKLLAGVTIAHGGVLPNINP+LLPK+T AA PKSPSKA KSPKKA
Sbjct: 11 AAGRKAGGPRKKAVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPILLPKKT--AAKEPKSPSKATKSPKKA 147
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A7N2KPH4|A0A7N2KPH4_QUELO (Histone H2A OS=Quercus lobata OX=97700 PE=3 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 4.838e-80 Identity = 121/139 (87.05%), Postives = 128/139 (92.09%), Query Frame = 0 Query: 2 AGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKKA 140
AGGRKG G RKKSVTRSVKAGLQFPVGRIGR+LKKGRYAQR G+GAPVY+AAVLEYLAAEVLELAGNAARDNKK RI PRH+LLAVRND+ELGKLLAGVTIAHGGVLPNINP+LLPK+TE PKSPSKA KSPKKA
Sbjct: 6 AGGRKGSGSRKKSVTRSVKAGLQFPVGRIGRYLKKGRYAQRCGSGAPVYMAAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKTEKTTKEPKSPSKAAKSPKKA 144
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371F2C4|A0A371F2C4_MUCPR (Histone H2A (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_48079 PE=3 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 1.133e-79 Identity = 121/135 (89.63%), Postives = 129/135 (95.56%), Query Frame = 0 Query: 6 KGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKKA 140
KGGGP+KK V+RSVKAGLQFPVGRIGR+LKKGRY+QRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI PRH+LLAVRND+ELGKLLAGVTIAHGGVLPNINPVLLPK+TE A+ PKSPSKA KSPKKA
Sbjct: 1 KGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTEKASKEPKSPSKATKSPKKA 135
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2U1LYV8|A0A2U1LYV8_ARTAN (Histone H2A OS=Artemisia annua OX=35608 GN=CTI12_AA438060 PE=3 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 2.599e-79 Identity = 122/139 (87.77%), Postives = 129/139 (92.81%), Query Frame = 0 Query: 2 AGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKKA 140
A GRK GGPRKKSVTRSVKAGLQFPVGRIGR+LKKGRYA+RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKK RI PRH+LLA+RND+ELGKLL+GVTIAHGGVLPNINPVLLPK+T A PKSPSKA KSPKKA
Sbjct: 11 AAGRKAGGPRKKSVTRSVKAGLQFPVGRIGRYLKKGRYAKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAIRNDEELGKLLSGVTIAHGGVLPNINPVLLPKKTAAKEPTPKSPSKAAKSPKKA 149
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2U1LCN7|A0A2U1LCN7_ARTAN (Histone H2A OS=Artemisia annua OX=35608 GN=CTI12_AA317410 PE=3 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 2.779e-79 Identity = 121/139 (87.05%), Postives = 129/139 (92.81%), Query Frame = 0 Query: 2 AGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKKA 140
A GRK GGPRKKSVTRSVKAGLQFPVGRIGR+LKKGRYA+RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKK RI PRH+LLA+RND+ELGKLL+GVTIAHGGVLPNINPVLLPK+T A + PKSPSK KSPKKA
Sbjct: 11 AAGRKAGGPRKKSVTRSVKAGLQFPVGRIGRYLKKGRYAKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAIRNDEELGKLLSGVTIAHGGVLPNINPVLLPKKTAAKESTPKSPSKVGKSPKKA 149
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6L2P3X2|A0A6L2P3X2_TANCI (Histone H2A OS=Tanacetum cinerariifolium OX=118510 GN=Tci_065186 PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 3.815e-79 Identity = 122/139 (87.77%), Postives = 129/139 (92.81%), Query Frame = 0 Query: 2 AGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKKA 140
A GRK GGPRKKSVTRSVKAGLQFPVG IGR+LKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI PRH+LLA+RND +LGKLL+GVTIAHGGVLPNINPVLLPK+T A + PKSPSKA KSPKKA
Sbjct: 11 AAGRKAGGPRKKSVTRSVKAGLQFPVGIIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDTKLGKLLSGVTIAHGGVLPNINPVLLPKKTAAKESTPKSPSKAGKSPKKA 149
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2U1KNS1|A0A2U1KNS1_ARTAN (Histone H2A OS=Artemisia annua OX=35608 GN=CTI12_AA581510 PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 9.185e-79 Identity = 120/138 (86.96%), Postives = 128/138 (92.75%), Query Frame = 0 Query: 2 AGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKK 139
A GRK GGPRKKSVTRSVKAGLQFPVGRIGR+LKKGRYA+RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKK RI PRH+LLA+RND+ELGKLL+GVTIAHGGVLPNINPVLLPK+T A + PKSPSK KSPKK
Sbjct: 11 AAGRKAGGPRKKSVTRSVKAGLQFPVGRIGRYLKKGRYAKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAIRNDEELGKLLSGVTIAHGGVLPNINPVLLPKKTAAKESTPKSPSKVGKSPKK 148
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A251UI95|A0A251UI95_HELAN (Histone H2A OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr06g0175791 PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 4.216e-78 Identity = 121/139 (87.05%), Postives = 128/139 (92.09%), Query Frame = 0 Query: 2 AGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKKA 140
A GRK GGPRKKSVTRSVKAGLQFPVGRIGR+LK GRYA+RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI+PRH+LLA+RND ELGKLLAGVTIAHGGVLPNINPVLLPK++ AAA KSP K KSPKKA
Sbjct: 11 AAGRKAGGPRKKSVTRSVKAGLQFPVGRIGRYLKHGRYAKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRITPRHVLLAIRNDDELGKLLAGVTIAHGGVLPNINPVLLPKKSAAAAKETKSPVKPGKSPKKA 149
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2G2VP50|A0A2G2VP50_CAPBA (Histone H2A OS=Capsicum baccatum OX=33114 GN=CQW23_26523 PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 4.260e-78 Identity = 122/139 (87.77%), Postives = 127/139 (91.37%), Query Frame = 0 Query: 2 AGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKKA 140
A GR GGP+KK V+RSVKAGLQFPVGRIGRFLKKGRYA RVG+GAPVYLAAVLEYLAAEVLELAGNAARDNKK RI PRHLLLAVRND+ELGKLLAGVTIAHGGVLPNINPVLLPK+T A APKSPSKA KSPKKA
Sbjct: 11 AAGRSRGGPKKKPVSRSVKAGLQFPVGRIGRFLKKGRYAHRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTGTAEKAPKSPSKATKSPKKA 149
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A396JH68|A0A396JH68_MEDTR (Histone H2A OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr2g0327951 PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 5.907e-78 Identity = 118/131 (90.08%), Postives = 124/131 (94.66%), Query Frame = 0 Query: 10 PRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKKA 140
PRKKSVTRS +AGLQFPVGRIGR+LKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI PRH+LLAVRND+ELGKLLAGVTIAHGGVLPNINP+LLPK+ E AAT KSPSKA KSPKKA
Sbjct: 55 PRKKSVTRSTRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKNEKAATTTKSPSKATKSPKKA 185
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q2HU68|H2A1_MEDTR (Probable histone H2A.1 OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC149210g1v1 PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 2.683e-80 Identity = 118/131 (90.08%), Postives = 124/131 (94.66%), Query Frame = 0 Query: 10 PRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKKA 140
PRKKSVTRS +AGLQFPVGRIGR+LKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI PRH+LLAVRND+ELGKLLAGVTIAHGGVLPNINP+LLPK+ E AAT KSPSKA KSPKKA
Sbjct: 18 PRKKSVTRSTRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKNEKAATTTKSPSKATKSPKKA 148
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/Swiss-Prot
Match: sp|P40281|H2A2_PEA (Histone H2A.2 OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 6.455e-80 Identity = 124/132 (93.94%), Postives = 131/132 (99.24%), Query Frame = 0 Query: 9 GPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKKA 140
GPRKK+VTRSV+AGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRND ELGKLLAGVTIA+GGVLPNINPVLLPKRTE+AA+APKSPSKA+K+PKKA
Sbjct: 18 GPRKKAVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAYGGVLPNINPVLLPKRTESAASAPKSPSKAKKTPKKA 149
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/Swiss-Prot
Match: sp|P19177|H2A_PETCR (Histone H2A OS=Petroselinum crispum OX=4043 PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 7.206e-79 Identity = 121/132 (91.67%), Postives = 124/132 (93.94%), Query Frame = 0 Query: 10 PRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRT-EAAATAPKSPSKARKSPKKA 140
PRKKSVTRSVKAGLQFPVGRIGR+LKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKK RI PRHLLLAVRND+ELGKLLAGVT AHGGVLPNINPVLLPK+T E AA PKSPSKA KSPKKA
Sbjct: 18 PRKKSVTRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHLLLAVRNDEELGKLLAGVTFAHGGVLPNINPVLLPKKTAEKAAKEPKSPSKAGKSPKKA 149
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/Swiss-Prot
Match: sp|P02277|H2A3_WHEAT (Histone H2A.2.2 OS=Triticum aestivum OX=4565 PE=1 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 1.589e-75 Identity = 118/141 (83.69%), Postives = 127/141 (90.07%), Query Frame = 0 Query: 4 GRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAA----TAPKSPSKARKSPKKA 140
G+K GGPRKKSVTRS+KAGLQFPVGRIGR+LKKGRYAQRVG+GAPVYLAAVLEYLAAEVLELAGNAA+DNKK+RI PRHLLLAVRNDQELG+LLAGVTIAHGGV+PNINPVLLPK+ A T KSP KA KSPKKA
Sbjct: 11 GKKFGGPRKKSVTRSIKAGLQFPVGRIGRYLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAAKDNKKSRIVPRHLLLAVRNDQELGRLLAGVTIAHGGVIPNINPVLLPKKAAEKAEKAGTKAKSPKKATKSPKKA 151
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LZ46|H2A4_ARATH (Probable histone H2A.4 OS=Arabidopsis thaliana OX=3702 GN=At5g02560 PE=1 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 8.600e-75 Identity = 111/134 (82.84%), Postives = 124/134 (92.54%), Query Frame = 0 Query: 10 PRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAAT---APKSPSKARKSPKKA 140
P+KK V+RSVK+GLQFPVGRIGR+LKKGRY++RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI PRH+LLAVRND+ELG LL GVTIAHGGVLPNINP+LLPK++E AA+ PKSPSKA KSPKK+
Sbjct: 20 PKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSEKAASTTKTPKSPSKATKSPKKS 153
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/Swiss-Prot
Match: sp|P25469|H2A1_SOLLC (Histone H2A.1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 1.518e-74 Identity = 118/140 (84.29%), Postives = 129/140 (92.14%), Query Frame = 0 Query: 2 AGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSP-SKARKSPKKA 140
AGGRKGG PRKKSVT+S+KAGLQFPVGRIGR+LKKGRYAQRVG+GAP+YLAAVLEYLAAEVLELAGNAARDNKK+RI PRH+LLAVRND+ELGKLLAGVTIA GGVLPNINPVLLPK++ A KSP +KA KSPKKA
Sbjct: 10 AGGRKGG-PRKKSVTKSIKAGLQFPVGRIGRYLKKGRYAQRVGSGAPIYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHVLLAVRNDEELGKLLAGVTIASGGVLPNINPVLLPKKS--AVAEEKSPKAKAGKSPKKA 146
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9M531|H2A_EUPES (Histone H2A OS=Euphorbia esula OX=3993 PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 4.969e-74 Identity = 122/143 (85.31%), Postives = 128/143 (89.51%), Query Frame = 0 Query: 2 AGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLL----PKRTEAAATAPKSPSKARKSPKKA 140
AG RKGGGP+KK V+RSVKAGLQFPVGRIGRFLKKGRYAQRVG+GAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI PRH+LLAVRND+ELGKLLAGVTIAHGGVLPNINPVLL K AA PKSP+KA KSPKKA
Sbjct: 11 AGERKGGGPKKKPVSRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKAEKAAAAATKEPKSPAKATKSPKKA 153
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q1S053|H2A3_MEDTR (Probable histone H2A.3 OS=Medicago truncatula OX=3880 PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 3.988e-73 Identity = 118/134 (88.06%), Postives = 125/134 (93.28%), Query Frame = 0 Query: 9 GPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSP--SKARKSPKKA 140
GPRKKSVTRS++AGLQFPVGRIGR+LKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI PRHLLLAVRND+ELGKLLAGVTIAHGGVLPNINP+LLPK+TE A T K P +KA KSPKKA
Sbjct: 19 GPRKKSVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKTERANTGGKEPKTTKAGKSPKKA 152
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q75L11|H2A6_ORYSJ (Probable histone H2A.6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0113900 PE=2 SV=2) HSP 1 Score: 217.624 bits (553), Expect = 7.787e-73 Identity = 109/124 (87.90%), Postives = 116/124 (93.55%), Query Frame = 0 Query: 4 GRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAP 127
GRK GGP+KK V+RSVKAGLQFPVGRIGR+LKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI PRH+LLA+RND+ELGKLLAGVTIAHGGVLPNINPVLLPK+T A P
Sbjct: 15 GRKLGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTAEKADKP 138
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/Swiss-Prot
Match: sp|A2XZN0|H2A6_ORYSI (Probable histone H2A.6 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_017523 PE=3 SV=2) HSP 1 Score: 217.624 bits (553), Expect = 7.787e-73 Identity = 109/124 (87.90%), Postives = 116/124 (93.55%), Query Frame = 0 Query: 4 GRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAP 127
GRK GGP+KK V+RSVKAGLQFPVGRIGR+LKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI PRH+LLA+RND+ELGKLLAGVTIAHGGVLPNINPVLLPK+T A P
Sbjct: 15 GRKLGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTAEKADKP 138
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. Araport11
Match: AT5G02560.1 (| histone H2A 12 | Chr5:575437-576456 FORWARD LENGTH=153 | 201606) HSP 1 Score: 222.631 bits (566), Expect = 8.798e-76 Identity = 111/134 (82.84%), Postives = 124/134 (92.54%), Query Frame = 0 Query: 10 PRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAAT---APKSPSKARKSPKKA 140
P+KK V+RSVK+GLQFPVGRIGR+LKKGRY++RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI PRH+LLAVRND+ELG LL GVTIAHGGVLPNINP+LLPK++E AA+ PKSPSKA KSPKK+
Sbjct: 20 PKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSEKAASTTKTPKSPSKATKSPKKS 153
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. Araport11
Match: AT5G27670.1 (| histone H2A 7 | Chr5:9792807-9793365 REVERSE LENGTH=150 | 201606) HSP 1 Score: 211.846 bits (538), Expect = 1.345e-71 Identity = 110/139 (79.14%), Postives = 124/139 (89.21%), Query Frame = 0 Query: 2 AGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKKA 140
AGGRKGG RKKSV++SVKAGLQFPVGRI R+LKKGRYA R G+GAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI+PRHL LA+RND+ELG+LL GVTIA GGVLPNINPVLLPK++ A+++ + S A KSPKKA
Sbjct: 14 AGGRKGG-DRKKSVSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLPKKSTASSSQAEKAS-ATKSPKKA 150
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. Araport11
Match: AT5G02560.2 (| histone H2A 12 | Chr5:575437-576456 FORWARD LENGTH=177 | 201606) HSP 1 Score: 210.305 bits (534), Expect = 1.255e-70 Identity = 111/158 (70.25%), Postives = 124/158 (78.48%), Query Frame = 0 Query: 10 PRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAE------------------------VLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAAT---APKSPSKARKSPKKA 140
P+KK V+RSVK+GLQFPVGRIGR+LKKGRY++RVGTGAPVYLAAVLEYLAAE VLELAGNAARDNKKNRI PRH+LLAVRND+ELG LL GVTIAHGGVLPNINP+LLPK++E AA+ PKSPSKA KSPKK+
Sbjct: 20 PKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAENSCGFCSVASLTIYRCRMSSSDFRVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSEKAASTTKTPKSPSKATKSPKKS 177
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. Araport11
Match: AT5G59870.1 (| histone H2A 6 | Chr5:24115605-24116144 REVERSE LENGTH=150 | 201606) HSP 1 Score: 205.297 bits (521), Expect = 4.787e-69 Identity = 106/139 (76.26%), Postives = 119/139 (85.61%), Query Frame = 0 Query: 3 GGRKG-GGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKKA 140
GGRK G P+ KSV++S+KAGLQFPVGRI RFLKKGRYAQR+G GAPVY+AAVLEYLAAEVLELAGNAARDNKK+RI PRHLLLA+RND+ELGKLL+GVTIAHGGVLPNIN VLLPK++ K+ KSPKKA
Sbjct: 12 GGRKPPGAPKTKSVSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLPKKSATKPAEEKATKSPVKSPKKA 150
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. Araport11
Match: AT1G51060.1 (| histone H2A 10 | Chr1:18926948-18927443 FORWARD LENGTH=132 | 201606) HSP 1 Score: 182.956 bits (463), Expect = 2.048e-60 Identity = 91/117 (77.78%), Postives = 102/117 (87.18%), Query Frame = 0 Query: 7 GGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAA 123
G G KK+ TRS KAGLQFPVGRI RFLKKG+YA+RVG GAPVYLAAVLEYLAAEVLELAGNAARDNKK RI PRH+ LAVRND+EL KLL VTIA+GGV+PNI+ +LLPK+T A+
Sbjct: 9 GSGSAKKATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGAS 125
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. Araport11
Match: AT4G27230.2 (| histone H2A 2 | Chr4:13637515-13638325 REVERSE LENGTH=131 | 201606) HSP 1 Score: 178.333 bits (451), Expect = 1.207e-58 Identity = 89/117 (76.07%), Postives = 100/117 (85.47%), Query Frame = 0 Query: 3 GGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKR 119
G + G G KKS +RS KAGLQFPVGRI RFLK G+YA+RVG GAPVYLAAVLEYLAAEVLELAGNAARDNKK RI PRH+ LAVRND+EL KLL VTIA+GGV+PNI+ +LLPK+
Sbjct: 5 GKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK 121
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. Araport11
Match: AT4G27230.1 (| histone H2A 2 | Chr4:13637515-13638325 REVERSE LENGTH=131 | 201606) HSP 1 Score: 178.333 bits (451), Expect = 1.207e-58 Identity = 89/117 (76.07%), Postives = 100/117 (85.47%), Query Frame = 0 Query: 3 GGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKR 119
G + G G KKS +RS KAGLQFPVGRI RFLK G+YA+RVG GAPVYLAAVLEYLAAEVLELAGNAARDNKK RI PRH+ LAVRND+EL KLL VTIA+GGV+PNI+ +LLPK+
Sbjct: 5 GKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK 121
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. Araport11
Match: AT3G20670.1 (| histone H2A 13 | Chr3:7229472-7229963 FORWARD LENGTH=132 | 201606) HSP 1 Score: 177.948 bits (450), Expect = 1.952e-58 Identity = 89/117 (76.07%), Postives = 99/117 (84.62%), Query Frame = 0 Query: 7 GGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAA 123
G G KKS +RS KAGLQFPVGRI RFLK G+YA RVG GAPVYLAAVLEYLAAEVLELAGNAARDNKK RI PRH+ LAVRND+EL KLL VTIA+GGV+PNI+ +LLPK+ A+
Sbjct: 9 GSGVAKKSTSRSSKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKKAGAS 125
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. Araport11
Match: AT5G54640.1 (| Histone superfamily protein | Chr5:22196540-22197279 FORWARD LENGTH=130 | 201606) HSP 1 Score: 176.022 bits (445), Expect = 1.023e-57 Identity = 90/123 (73.17%), Postives = 103/123 (83.74%), Query Frame = 0 Query: 7 GGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKS 129
G G KK+ +RS KAGLQFPVGRI RFLK G+YA+RVG GAPVYLAAVLEYLAAEVLELAGNAARDNKK RI PRH+ LAVRND+EL KLL VTIA+GGV+PNI+ +LLPK+ A A+ P+
Sbjct: 9 GSGGAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK--AGASKPQE 129
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. Araport11
Match: AT1G08880.1 (| Histone superfamily protein | Chr1:2847144-2847676 REVERSE LENGTH=142 | 201606) HSP 1 Score: 174.866 bits (442), Expect = 4.733e-57 Identity = 90/118 (76.27%), Postives = 100/118 (84.75%), Query Frame = 0 Query: 3 GGRKGGGPR-KKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKR 119
GGR G P+ KSV+RS KAGLQFPVGRI RFLK G+YA+RVG GAPVYL+AVLEYLAAEVLELAGNAARDNKK RI PRH+ LAVRND+EL KLL VTIA+GGVLPNI+ LLP +
Sbjct: 12 GGR--GKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSK 127 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.1g035840.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g035840.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g035840.1; organism=Vicia faba; type=mRNA; length=423bpback to top protein sequence of Vfaba.Hedin2.R1.1g035840.1_vfh_v1 >Vfaba.Hedin2.R1.1g035840.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g035840.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g035840.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=140bpback to top mRNA from alignment at chr1S:230403052..230403557- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.1g035840.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g035840.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g035840.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr1S:230403052..230403557- (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
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