Vfaba.Hedin2.R1.1g036960.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.1g036960.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3P9B6|A0A2K3P9B6_TRIPR (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g008486 PE=4 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 4.586e-58 Identity = 94/137 (68.61%), Postives = 114/137 (83.21%), Query Frame = 0 Query: 1 MDSDCVSVCVNNKSIPIRPTFANLYKWPESEVEFVKTMNTNSFCNNKAEFDSLSCRQMYLRSYRFSRKKLSVTEKTIKCFNSVKESVIYASNRLNYNIK-GNCKILGRAKYVTYASVSIFHRMLSRFGKVHLARYGY 136
M S + C NNKSIP+RPTFANLYKWPESEVEFVK MN+N++ + SLSCRQ+YLRSY+FSRKKLS TEKTIK FNSVK+SV+ ASNRLNYNIK GNC +LGRAKYVT+A+VSIFH+++SR K ++AR+ +
Sbjct: 1 MASVTIYNCANNKSIPVRPTFANLYKWPESEVEFVKIMNSNNYRDGVEVDHSLSCRQIYLRSYKFSRKKLSGTEKTIKYFNSVKKSVVCASNRLNYNIKEGNCMLLGRAKYVTHAAVSIFHKLISRTHKGYVARHDF 137
BLAST of Vfaba.Hedin2.R1.1g036960.1 vs. UniProtKB/TrEMBL
Match: tr|G7IU99|G7IU99_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MTR_2g096120 PE=4 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 1.359e-57 Identity = 94/136 (69.12%), Postives = 114/136 (83.82%), Query Frame = 0 Query: 1 MDSDCVSVCVNNKSIPIRPTFANLYKWPESEVEFVKTMNTNSFCNNKAEFDSLSCRQMYLRSYRFSRKKLSVTEKTIKCFNSVKESVIYASNRLNYNIKGNCKILGRAKYVTYASVSIFHRMLSRFGKVHLARYGY 136
M S C+S VNNK IPIRP F NLYKWPESEVEFVKTMN+N++ ++ E DSLSCRQ+YLRSY+FSRKKLSVTEKTIK F+S+KESVI ASN L N KGN KI GRAK++T+A+VS++HR+LSR KVH+AR+ +
Sbjct: 1 MASVCISNSVNNKIIPIRPNFTNLYKWPESEVEFVKTMNSNNY-RDRVEVDSLSCRQVYLRSYKFSRKKLSVTEKTIKYFSSLKESVICASNILCCNSKGNRKIPGRAKHITHAAVSVYHRLLSRSDKVHVARHDF 135
BLAST of Vfaba.Hedin2.R1.1g036960.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XF71|A0A1S2XF71_CICAR (uncharacterized protein LOC101493563 OS=Cicer arietinum OX=3827 GN=LOC101493563 PE=4 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 8.005e-50 Identity = 88/136 (64.71%), Postives = 105/136 (77.21%), Query Frame = 0 Query: 1 MDSDCVSVCVNNKSIPIRPTFANLYKWPESEVEFVKTMNTNSFCNNKAEFDSLSCRQMYLRSYRFSRKKLSVTEKTIKCFNSVKESVIYASNRLNYNIKGNCKILGRAKYVTYASVSIFHRMLSRFGKVHLARYGY 136
M S C+S CVNNK+I IRPTFANLYKWPESEVEFVKT+N++ + K E DSLSCRQMYLRSY+FSRKK SVT KTIKCF+S+KESV+ SN +K N KI+ R KYVT +VSI HR+LSR KVH+ + +
Sbjct: 1 MASVCISNCVNNKTISIRPTFANLYKWPESEVEFVKTINSDKY-RVKDEVDSLSCRQMYLRSYKFSRKK-SVTWKTIKCFSSIKESVVCGSNN---RLKNNIKIIERVKYVTRVAVSIIHRLLSRSDKVHVGCHDF 131
BLAST of Vfaba.Hedin2.R1.1g036960.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151SUW7|A0A151SUW7_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_014009 PE=4 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 7.110e-47 Identity = 79/131 (60.31%), Postives = 99/131 (75.57%), Query Frame = 0 Query: 1 MDSDCVSVCVNNKSIPIRPTFANLYKWPESEVEFVKTMNTNSFCNNKAEFDSLSCRQMYLRSYRFSRKKLSVTEKTIKCFNSVKESVIYASNRLNYNIKGNCKILGRAKYVTYASVSIFHRMLSRFGKVHL 131
M S +S CV + +P+RPTF NLYKWPES+VEFVKT+N+NS DS SCRQMYLRSY+FSRKK+ VT+KT+KCFN +KESV+ A+NRLN+ KG CK+LGRAK VT+A+ SIF +L KV +
Sbjct: 1 MASARISDCVKDSRLPLRPTFVNLYKWPESDVEFVKTVNSNS----PRGIDSFSCRQMYLRSYKFSRKKVGVTQKTLKCFNKLKESVVCATNRLNF--KGKCKVLGRAKDVTFAAFSIFQTLLPCSAKVDV 125
BLAST of Vfaba.Hedin2.R1.1g036960.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445IDI3|A0A445IDI3_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_032507 PE=4 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.705e-39 Identity = 72/131 (54.96%), Postives = 89/131 (67.94%), Query Frame = 0 Query: 1 MDSDCVSVCVNNKSIPIRPTFANLYKWPESEVEFVKTMNTNSFCNNKAEFDSLSCRQMYLRSYRFSRKKLSVTEKTIKCFNSVKESVIYASNRLNYNIKGNCKILGRAKYVTYASVSIFHRMLSRFGKVHL 131
M S C S CV + P+RPTF N +KWPESEVEFVKT+N+N K DS SCRQMYLRSY+FSR+K+ V EKT+KCFN +KE V+ N+L N+K K+L RAK VT+A+ SIF L KV +
Sbjct: 1 MASVCKSDCVKDSHRPLRPTFVNRHKWPESEVEFVKTVNSNIHAKPKGAVDSFSCRQMYLRSYKFSREKVGVREKTLKCFNKLKERVVCVRNKL--NLKSKYKVLVRAKDVTFAAFSIFQSFLPCSAKVDV 129
BLAST of Vfaba.Hedin2.R1.1g036960.1 vs. UniProtKB/TrEMBL
Match: tr|I1M4Q9|I1M4Q9_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100775327 PE=4 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.705e-39 Identity = 72/131 (54.96%), Postives = 89/131 (67.94%), Query Frame = 0 Query: 1 MDSDCVSVCVNNKSIPIRPTFANLYKWPESEVEFVKTMNTNSFCNNKAEFDSLSCRQMYLRSYRFSRKKLSVTEKTIKCFNSVKESVIYASNRLNYNIKGNCKILGRAKYVTYASVSIFHRMLSRFGKVHL 131
M S C S CV + P+RPTF N +KWPESEVEFVKT+N+N K DS SCRQMYLRSY+FSR+K+ V EKT+KCFN +KE V+ N+L N+K K+L RAK VT+A+ SIF L KV +
Sbjct: 1 MASVCKSDCVKDSHRPLRPTFVNRHKWPESEVEFVKTVNSNIHAKPKGAVDSFSCRQMYLRSYKFSREKVGVREKTLKCFNKLKERVVCVRNKL--NLKSKYKVLVRAKDVTFAAFSIFQSFLPCSAKVDV 129
BLAST of Vfaba.Hedin2.R1.1g036960.1 vs. UniProtKB/TrEMBL
Match: tr|C6TMW6|C6TMW6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.909e-38 Identity = 71/131 (54.20%), Postives = 89/131 (67.94%), Query Frame = 0 Query: 1 MDSDCVSVCVNNKSIPIRPTFANLYKWPESEVEFVKTMNTNSFCNNKAEFDSLSCRQMYLRSYRFSRKKLSVTEKTIKCFNSVKESVIYASNRLNYNIKGNCKILGRAKYVTYASVSIFHRMLSRFGKVHL 131
M S C S CV + P+RPTF N +KWPESEVEFVKT+N+N K DS SCRQMYLRSY+FSR+K+ V EKT+KCFN +K+ V+ N+L N+K K+L RAK VT+A+ SIF L KV +
Sbjct: 1 MASVCKSDCVKDSHRPLRPTFVNRHKWPESEVEFVKTVNSNIHAKPKGAVDSFSCRQMYLRSYKFSREKVGVREKTLKCFNKLKKRVVCVRNKL--NLKSKYKVLVRAKDVTFAAFSIFQSFLPCSAKVDV 129
BLAST of Vfaba.Hedin2.R1.1g036960.1 vs. UniProtKB/TrEMBL
Match: tr|V7BWE4|V7BWE4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G139700g PE=4 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.997e-38 Identity = 68/125 (54.40%), Postives = 90/125 (72.00%), Query Frame = 0 Query: 10 VNNKSIPIRPTFANLYKWPESEVEFVKTMNTNSFCNNKAE---FDSLSCRQMYLRSYRFSRKKLSVTEKTIKCFNSVKESVIYASNRLNYNIKGNCKILGRAKYVTYASVSIFHRMLSRFGKVHL 131
VN ++P+RPT+ NLYKWPES+VEFVK++N+N + + DS SCRQMYLRSY+FS+KK+ VTEKT+KCFN +KE V SN+L +KG ++LGRAK VT+A+ SIF L KV +
Sbjct: 15 VNKTTLPLRPTYVNLYKWPESDVEFVKSVNSNICVGSNVQTKGVDSFSCRQMYLRSYKFSKKKVGVTEKTLKCFNKLKEGVACVSNKL--KLKGKNRVLGRAKDVTFAAFSIFQTFLPCSAKVDV 137
BLAST of Vfaba.Hedin2.R1.1g036960.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3TV03|A0A1S3TV03_VIGRR (uncharacterized protein LOC106759117 OS=Vigna radiata var. radiata OX=3916 GN=LOC106759117 PE=4 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 2.745e-37 Identity = 70/134 (52.24%), Postives = 92/134 (68.66%), Query Frame = 0 Query: 1 MDSDCVSVCVNNKSIPIRPTFANLYKWPESEVEFVKTMNTNSFCNNKA---EFDSLSCRQMYLRSYRFSRKKLSVTEKTIKCFNSVKESVIYASNRLNYNIKGNCKILGRAKYVTYASVSIFHRMLSRFGKVHL 131
M S +S CV+ + +P+RPT+ NLYKWPES++EFVKT+ + N E DS SCRQMYLRSY+FS+KK+ VTEKT+KC N +KE V SN+L + KG K+LGRA+ VTYA+ SI L + KV +
Sbjct: 21 MASVFISECVSKRRLPLRPTYLNLYKWPESDMEFVKTIRDKAELLNDVQAKEVDSFSCRQMYLRSYKFSKKKVGVTEKTLKCLNRLKEGVNCVSNKLKF--KGKNKVLGRARDVTYAAFSIVQTFLPCYAKVDV 152
BLAST of Vfaba.Hedin2.R1.1g036960.1 vs. UniProtKB/TrEMBL
Match: tr|V7CA28|V7CA28_PHAVU (Uncharacterized protein (Fragment) OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G063400g PE=4 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 3.378e-36 Identity = 65/124 (52.42%), Postives = 88/124 (70.97%), Query Frame = 0 Query: 10 VNNKSIPIRPTFANLYKWPESEVEFVKTMNTNSFCNNKAE---FDSLSCRQMYLRSYRFSRKKLSVTEKTIKCFNSVKESVIYASNRLNYNIKGNCKILGRAKYVTYASVSIFHRMLSRFGKVH 130
VN ++P+RPT+ NLYKWPES+VEFVK+++++ + + DS SCRQMYLRSY+FS+KK+ VTEKT+KCFN +KE V SN+L +KG ++LGRAK V +A+ SIF L KV
Sbjct: 5 VNKTALPLRPTYVNLYKWPESDVEFVKSVDSSIRVGSNVQTKGVDSFSCRQMYLRSYKFSKKKVGVTEKTLKCFNKLKEGVACVSNKL--KLKGKNRVLGRAKDVPFAAFSIFQTFLPCSAKVD 126
BLAST of Vfaba.Hedin2.R1.1g036960.1 vs. Araport11
Match: AT5G02640.1 (| hypothetical protein | Chr5:594334-594819 REVERSE LENGTH=161 | 201606) HSP 1 Score: 74.7146 bits (182), Expect = 1.207e-17 Identity = 35/74 (47.30%), Postives = 49/74 (66.22%), Query Frame = 0 Query: 1 MDSDCVSVCVNN---KSIPIRP---TFANLYKWPESEVEFVKTMNTNSFCNNKAEFDSLSCRQMYLRSYRFSRK 68
M+S C+S C+N+ +P+RP ++ NLYKWPES+ EFV+++ DS+SCRQMYLRSY FSR+
Sbjct: 1 MNSVCISSCINDAHDPRVPVRPVRASYVNLYKWPESDAEFVRSVRRGGGLPAARVVDSISCRQMYLRSYTFSRE 74
BLAST of Vfaba.Hedin2.R1.1g036960.1 vs. Araport11
Match: AT3G46300.1 (| hypothetical protein | Chr3:17016019-17016444 REVERSE LENGTH=141 | 201606) HSP 1 Score: 73.559 bits (179), Expect = 2.168e-17 Identity = 38/70 (54.29%), Postives = 48/70 (68.57%), Query Frame = 0 Query: 1 MDSDCVSVCVNNK--SIPIRP--TFANLYKWPESEVEFVKTMNTNSFCNNKAEFDSLSCRQMYLRSYRFS 66
M S C+ CVN K SI +RP T+ANLYKWP +E EFV+++N + + DS+SCRQMYLRSY FS
Sbjct: 1 MASKCIDDCVNIKRDSICVRPVMTYANLYKWPMAEAEFVRSINHDGSQHRTTVVDSISCRQMYLRSYTFS 70
BLAST of Vfaba.Hedin2.R1.1g036960.1 vs. Araport11
Match: AT3G46310.1 (| hypothetical protein | Chr3:17017451-17017825 REVERSE LENGTH=124 | 201606) HSP 1 Score: 71.2478 bits (173), Expect = 1.126e-16 Identity = 36/73 (49.32%), Postives = 49/73 (67.12%), Query Frame = 0 Query: 1 MDSDCVSVCVN--NKSIPIRP--TFANLYKWPESEVEFVKTMNTNSFCNNKAEFDSLSCRQMYLRSYRFSRKK 69
M S C+ CVN N +I +RP T A ++KWP +EVEFV++++ + +SLSCRQMYLRSY FSRK+
Sbjct: 1 MASKCIGDCVNIKNNAICVRPGRTHAKIHKWPMAEVEFVQSISQDGSPRRTTAVESLSCRQMYLRSYTFSRKE 73 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.1g036960.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.1g036960.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.1g036960.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 3 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.1g036960.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g036960.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g036960.1; organism=Vicia faba; type=mRNA; length=411bpback to top protein sequence of Vfaba.Hedin2.R1.1g036960.1_vfh_v1 >Vfaba.Hedin2.R1.1g036960.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g036960.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g036960.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=136bpback to top mRNA from alignment at chr1S:238500802..238501212- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.1g036960.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g036960.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g036960.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr1S:238500802..238501212- (Vicia fababack to top |