Vfaba.Hedin2.R1.1g053160.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.1g053160.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6MLL0|A0A2Z6MLL0_TRISU (B box-type domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_105450 PE=4 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 5.141e-72 Identity = 151/219 (68.95%), Postives = 164/219 (74.89%), Query Frame = 0
Query: 1 MKKNCELCKAPATTFCESDQASLCWDCDSKIHSANFLVARHVRTLLCHRCQSPTPWKASGATLSNALSLCETCGCGGGGGRKFED-EQEEESEGDNENEDDDEVDTDFDEEDEEEEELDGDEDGDNQVVPWSSTAAAPPPSSSSGSEESVSKSNDNDEEVVSKLVTINSISLKRRREEDRDFQASDSKICVDQRMYGGERRRDDGEPSSKALIRQVNDG 218
MKKNCELCK PA TFCESDQASLCWDCDSK+H ANFLV RH RTLLCH CQSPTPWKASGA L NALSLCE C GGRK + +Q EESEGDNE DEV+TD DE+ +EEE+ D+D DNQVVPWSSTA PP SSSS SEESV K N+ND EVVSKLVT I+LKRRR D DFQ SDSK +QR + R DGEPSSKA IR+ DG
Sbjct: 1 MKKNCELCKLPARTFCESDQASLCWDCDSKVHGANFLVERHTRTLLCHACQSPTPWKASGARLGNALSLCERC----AGGRKVDAVQQNEESEGDNE----DEVETDSDEDSDEEED---DDDVDNQVVPWSSTAMPPPASSSSSSEESVCKCNEND-EVVSKLVT--EITLKRRR-LDHDFQVSDSKNWKNQRREEVDLLRCDGEPSSKAAIRRYCDG 204
BLAST of Vfaba.Hedin2.R1.1g053160.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3M573|A0A2K3M573_TRIPR (Zinc finger protein/CONSTANS-like protein OS=Trifolium pratense OX=57577 GN=L195_g041998 PE=4 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 3.097e-67 Identity = 143/219 (65.30%), Postives = 162/219 (73.97%), Query Frame = 0
Query: 1 MKKNCELCKAPATTFCESDQASLCWDCDSKIHSANFLVARHVRTLLCHRCQSPTPWKASGATLSNALSLCETCGCGGGGGRKFED-EQEEESEGDNENEDDDEVDTDFDEEDEEEEELDGDEDGDNQVVPWSSTAAAPPPSSSSGSEESVSKSNDNDEEVVSKLVTINSISLKRRREEDRDFQASDSKICVDQRMYGGERRRDDGEPSSKALIRQVNDG 218
MKKNCELCK PA TFCESDQASLCWDCDSK+H ANFLV RH RTLLCH CQSPTPWKASGA L NALSLCE C GGRK + +Q+EESEGDNE+ D + D ++E+ +E + D DGDNQVVPWSSTA PP SSSSGSEESV K N+ND EVVS+LVT +I+LKRRR D DFQ SDSK +QR + GEP+SKA IR+ DG
Sbjct: 1 MKKNCELCKLPARTFCESDQASLCWDCDSKVHGANFLVERHTRTLLCHACQSPTPWKASGARLGNALSLCERC----AGGRKVDSVQQDEESEGDNED------DVETDSDEEDSDEDEDDVDGDNQVVPWSSTAMPPPASSSSGSEESVCKCNEND-EVVSQLVT--AITLKRRR-VDHDFQDSDSKNWKNQRREEVDLLGCVGEPTSKAAIRRYCDG 205
BLAST of Vfaba.Hedin2.R1.1g053160.1 vs. UniProtKB/TrEMBL
Match: tr|G7IRL0|G7IRL0_MEDTR (B-box type zinc finger protein OS=Medicago truncatula OX=3880 GN=11417549 PE=4 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.317e-60 Identity = 138/234 (58.97%), Postives = 160/234 (68.38%), Query Frame = 0
Query: 1 MKKNCELCKAPATTFCESDQASLCWDCDSKIHSANFLVARHVRTLLCHRCQSPTPWKASGATLSNALSLCETCGCGGGGGRKFED------------EQEEESEGDNENEDDDEVDTDFDEEDEEEEELDGDEDGDNQVVPWSST---AAAPPPSSSSGSEESVSKSNDNDEEVVSKLVTINSISLKRRREEDRDFQASDSKICVDQRMYGGERRRD--DGEPSSKALIRQVND 217
MKKNCELCK PA TFCESDQASLCWDCDSK+H+ANFLV RH+RTLLCH CQSPTPWKASGA L NALSLC+ C GGRK EQ++ESEGDN+NE+D + D+D D++D + + EDGDNQVVPWSST SS S SVSK NDN +EV+SKLVT +ISLKRRR D DF+ SDSK +QR E DGEPSSKA +R+ +D
Sbjct: 1 MKKNCELCKLPARTFCESDQASLCWDCDSKVHAANFLVERHMRTLLCHACQSPTPWKASGARLGNALSLCDRC----AGGRKLHADANANANAGTSAEQQDESEGDNDNEEDTDYDSDEDDDDVDGD-----EDGDNQVVPWSSTAAQPPPASSSSGSDESVSVSKCNDNHDEVISKLVT--TISLKRRR-LDHDFEVSDSKNWKNQRREVDEVDLIGCDGEPSSKAAMRRYSD 222
BLAST of Vfaba.Hedin2.R1.1g053160.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A4PF38|A0A6A4PF38_LUPAL (Putative transcription factor interactor and regulator Znf-B family OS=Lupinus albus OX=3870 GN=Lal_00046349 PE=4 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.499e-59 Identity = 113/200 (56.50%), Postives = 129/200 (64.50%), Query Frame = 0
Query: 1 MKKNCELCKAPATTFCESDQASLCWDCDSKIHSANFLVARHVRTLLCHRCQSPTPWKASGATLSNALSLCETCGCGGGGGRKFEDEQEEESEGDNENEDDDEVDTDFDEEDEEEEELDGDEDGDNQVVPWSSTAAAPPPSSSSGSEESVSKSNDNDEEVVSKLVTINSISLKRRREEDRDFQASDSKICVDQRMYGGERR 200
MKK CELCK ATTFC+SDQASLCWDCDSK+HSANFLVARH RTLLCH CQS TPWKASGATL N +SLC+ C G + EESEGDN DD++D+ +DE EDGDNQVVP SSTA APP SSS E SV++ + DE+V T SLKRRR ED DFQ ++ +YG R
Sbjct: 1 MKK-CELCKVAATTFCDSDQASLCWDCDSKVHSANFLVARHTRTLLCHACQSLTPWKASGATLGNTVSLCQGC----AAGTRVNTVDVEESEGDN----DDDIDSLYDE----------GEDGDNQVVPLSSTATAPPACSSSSGEGSVTRCSHRDEDVSESTTT---ASLKRRR-EDNDFQEGSKRM----HVYGANLR 173
BLAST of Vfaba.Hedin2.R1.1g053160.1 vs. UniProtKB/TrEMBL
Match: tr|A0A394DBE5|A0A394DBE5_LUPAN (B box-type domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_11762 PE=4 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 4.890e-58 Identity = 111/200 (55.50%), Postives = 131/200 (65.50%), Query Frame = 0
Query: 1 MKKNCELCKAPATTFCESDQASLCWDCDSKIHSANFLVARHVRTLLCHRCQSPTPWKASGATLSNALSLCETCGCGGGGGRKFEDEQEEESEGDNENEDDDEVDTDFDEEDEEEEELDGDEDGDNQVVPWSSTAAAPPPSSSSGSEESVSKSNDNDEEVVSKLVTINSISLKRRREEDRDFQASDSKICVDQRMYGGERR 200
MKK CELCK ATTFC+SDQASLCWDCD+K+H ANFLVARH RTLLCH CQ+ TPWKASGATL N +S+C+ C GG + + EESEGDN DDE+D+ +DE DEDGDNQVVP SSTA APP SSS E SV + + D++V T SLKRRR ED DFQ + + +YG +R
Sbjct: 1 MKK-CELCKVAATTFCDSDQASLCWDCDTKVHGANFLVARHTRTLLCHACQNLTPWKASGATLGNTVSMCQGC----AGGARVNAGEGEESEGDN----DDEIDSLYDE----------DEDGDNQVVPLSSTATAPPACSSSTGEGSVIRCSRGDDDVSESSKT---ASLKRRR-EDNDFQEGSKR----RNVYGANQR 173
BLAST of Vfaba.Hedin2.R1.1g053160.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1J7HGY6|A0A1J7HGY6_LUPAN (B box-type domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_15318 PE=4 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 8.402e-57 Identity = 110/213 (51.64%), Postives = 129/213 (60.56%), Query Frame = 0
Query: 1 MKKNCELCKAPATTFCESDQASLCWDCDSKIHSANFLVARHVRTLLCHRCQSPTPWKASGATLSNALSLCETCGCGGGGGRKFEDEQEEESEGDNENEDDDEVDTDFDEEDEEEEELDGDEDGDNQVVPWSSTAAAPPPSSSSGSEESVSKSNDNDEEVVSKLVTINSISLKRRREEDRDFQASDSKICVDQRMYGGERRRD---DGEPSSKA 210
MKK CELC PATTFC+SDQA+LCW+CDSK+H+ANFLVARH RTLLCH C S TPWKASGAT NA+SLC C GG + ++ EESEGDN +E E L +EDGDNQVVPWSSTA APP GSE SV++ DE+V V +S+KRRR +D D Q + + Y G RR GEP K
Sbjct: 1 MKKKCELCNFPATTFCDSDQATLCWNCDSKVHTANFLVARHTRTLLCHTCHSLTPWKASGATTGNAVSLCVGC----AGGTRIHGDEGEESEGDN---------------GDELERL--EEDGDNQVVPWSSTATAPPDCKLFGSEGSVTRCGYGDEDVSESAVI---VSVKRRR-QDHDIQEGSKR----RNEYAGNRRDQVDYSGEPQLKV 184
BLAST of Vfaba.Hedin2.R1.1g053160.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1J7IRZ2|A0A1J7IRZ2_LUPAN (B box-type domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_27374 PE=4 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 4.724e-52 Identity = 108/189 (57.14%), Postives = 128/189 (67.72%), Query Frame = 0
Query: 1 MKKNCELCKAPATTFCESDQASLCWDCDSKIHSANFLVARHVRTLLCHRCQSPTPWKASGATLSNALSLCETCGCGGGGGRKFEDEQEEESEGDNENEDDDEVDTDFDEEDEEEEELDGDEDGDNQVVPWSSTAAAPPPSSSSGSEESVSK-SNDNDEEVVSKLVTINSISLKRRREEDRDFQASDSKI 188
MKK CELCK ATTFCESDQASLCWDCD+K+H ANFLVARH RTLLCH C S TPWKASGA L N +SLCE C GG + ++ +ESEGDN+ +E E ++ DEDGDNQVVPWSSTA PP SSS E SV++ S+ D E VS+ T ++S+KRRR ED D Q S S++
Sbjct: 1 MKK-CELCKVTATTFCESDQASLCWDCDAKVHGANFLVARHTRTLLCHTCHSLTPWKASGAFLGNTVSLCEGC----AGGTRVHADEVDESEGDND------------DEVESSDDEVEDEDGDNQVVPWSSTATTPPACSSSCVEGSVTRFSHGYDYEDVSESDT--TVSVKRRR-EDNDSQVSISRV 169
BLAST of Vfaba.Hedin2.R1.1g053160.1 vs. UniProtKB/TrEMBL
Match: tr|A0A392R503|A0A392R503_9FABA (B box-type domain-containing protein (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.118e-52 Identity = 98/139 (70.50%), Postives = 110/139 (79.14%), Query Frame = 0
Query: 1 MKKNCELCKAPATTFCESDQASLCWDCDSKIHSANFLVARHVRTLLCHRCQSPTPWKASGATLSNALSLCETCGCGGGGGRKFED-EQEEESEGDNENEDDDEVDTDFDEEDEEEEELDGDEDGDNQVVPWSSTAAAPP 138
MKKNCELCK PA TFCESDQASLCW+CDSK+H ANFLV RH RTLLCH CQSPTPWKASGA L NALSLCE C GGRK + +Q EESEGDNE D+V+TD DE+ +E+++ + D DGDNQVVPWSSTA PP
Sbjct: 1 MKKNCELCKGPARTFCESDQASLCWNCDSKVHGANFLVERHTRTLLCHACQSPTPWKASGARLGNALSLCERC----AGGRKVDSVQQNEESEGDNE----DDVETDSDEDSDEDDDDEDDVDGDNQVVPWSSTAMPPP 131
BLAST of Vfaba.Hedin2.R1.1g053160.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5NF68|A0A6A5NF68_LUPAL (Putative transcription factor interactor and regulator Znf-B family OS=Lupinus albus OX=3870 GN=Lal_00003210 PE=4 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.577e-49 Identity = 101/198 (51.01%), Postives = 126/198 (63.64%), Query Frame = 0
Query: 3 KNCELCKAPATTFCESDQASLCWDCDSKIHSANFLVARHVRTLLCHRCQSPTPWKASGATLSNALSLCETCGCGGGGGRKFEDEQEEESEGDNENEDDDEVDTDFDEEDEEEEELDGDEDGDNQVVPWSSTAAAPPPSSSSGSEESVSKSNDNDEEVVSKLVTINSISLKRRREEDRDFQASDSKICVDQRMYGGERR 200
K CELCK ATTFC+SDQASLCWDCD+K+H ANFLVARH RTLLCH C S TPWKASGA L N +SLCE C GG +F ++ +ESEGDN+ +E E ++ + DEDGDNQVVP SSTA PP SSS + +V++ + E+V T++S +RR D D Q + + +YGGERR
Sbjct: 2 KKCELCKVAATTFCDSDQASLCWDCDAKVHGANFLVARHTRTLLCHVCHSLTPWKASGAFLGNTVSLCEGC----AGGTRFHTDEYDESEGDND------------DEIENSDDEEEDEDGDNQVVPLSSTAMTPPACSSSCIDVAVTRFSHGYEDVSESATTVSS----KRRRVDHDSQEGSKR----RYVYGGERR 175
BLAST of Vfaba.Hedin2.R1.1g053160.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151SVD4|A0A151SVD4_CAJCA (Putative zinc finger protein CONSTANS-LIKE 11 OS=Cajanus cajan OX=3821 GN=KK1_014192 PE=4 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 8.503e-49 Identity = 109/184 (59.24%), Postives = 131/184 (71.20%), Query Frame = 0
Query: 1 MKKNCELCKAPATTFCESDQASLCWDCDSKIHSANFLVARHVRTLLCHRCQSPTPWKASGATLSNALSLCETCGCGGGGGRKFEDEQEEESEGDNENEDDDEVDTDFDEEDEEEEELDGDEDGDNQVVPW-SSTAAAPPPSSSSGSEESVSKSNDNDEEVVSKLVTINSISLKRRREEDRDFQA 183
MKK CELCK PA TFCESDQASLCWDCD+K+H ANFLVARH RTLLCH CQS TPWKASGA L N +SLC+ C G EQ +ESEG N+++ D + D D D++ E+E+E+ DEDGDNQVVPW S+ PP SSS S+ESVS+ N+NDE+V + T LKRRR+ + DFQ
Sbjct: 1 MKK-CELCKVPARTFCESDQASLCWDCDAKVHGANFLVARHTRTLLCHACQSLTPWKASGAALGNTVSLCQRCAGG-------TTEQAQESEGANDDDLDTDQDDD-DDQTEDEDEVTADEDGDNQVVPWSSAPPPPPPAPSSSSSDESVSRCNNNDEDVSQSVTT-----LKRRRQNN-DFQV 169
BLAST of Vfaba.Hedin2.R1.1g053160.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LRM4|MIP1B_ARATH (B-box domain protein 31 OS=Arabidopsis thaliana OX=3702 GN=MIP1B PE=2 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 1.073e-10 Identity = 28/50 (56.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query: 5 CELCKAPATTFCESDQASLCWDCDSKIHSANFLVARHVRTLLCHRCQSPT 54
CELC A+ FCE+D A LC CD +H ANFL RHVR +LC CQ T
Sbjct: 31 CELCDGDASVFCEADSAFLCRKCDRWVHGANFLAWRHVRRVLCTSCQKLT 80
BLAST of Vfaba.Hedin2.R1.1g053160.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LJB7|BBX32_ARATH (B-box zinc finger protein 32 OS=Arabidopsis thaliana OX=3702 GN=BBX32 PE=1 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.779e-10 Identity = 30/63 (47.62%), Postives = 37/63 (58.73%), Query Frame = 0
Query: 1 MKKNCELCKAPATTFCESDQASLCWDCDSKIHSANFLVARHVRTLLCHRCQSPTPWKASGATL 63
M CELC A A C +D A LC CD+K H++NFL ARH R ++C C+S T SG L
Sbjct: 1 MVSFCELCGAEADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCKSLTQNFVSGPLL 63
BLAST of Vfaba.Hedin2.R1.1g053160.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9C9F4|COLX_ARATH (Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana OX=3702 GN=At1g68190 PE=2 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 4.706e-10 Identity = 32/81 (39.51%), Postives = 45/81 (55.56%), Query Frame = 0
Query: 1 MKKNCELCKAP-ATTFCESDQASLCWDCDSKIHSANFLVARHVRTLLCHRCQSPTPWKASGATLSNALSLCETCGCGGGGG 80
M++ CE CKA A +C +D A+LC CD+K+HSAN L RH+RT+LC C++ + + LC C GG
Sbjct: 10 MERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCKN---QPCVVRCFDHKMFLCHGCNDKFHGG 87
BLAST of Vfaba.Hedin2.R1.1g053160.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q1G3I2|MIP1A_ARATH (B-box domain protein 30 OS=Arabidopsis thaliana OX=3702 GN=MIP1A PE=1 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 6.246e-10 Identity = 26/51 (50.98%), Postives = 34/51 (66.67%), Query Frame = 0
Query: 4 NCELCKAPATTFCESDQASLCWDCDSKIHSANFLVARHVRTLLCHRCQSPT 54
+CELC AT +CE+D A LC CD +HSANFL RH+R ++C C+ T
Sbjct: 31 SCELCGENATVYCEADAAFLCRKCDRWVHSANFLARRHLRRVICTTCRKLT 81
BLAST of Vfaba.Hedin2.R1.1g053160.1 vs. Araport11
Match: AT4G27310.1 (| B-box type zinc finger family protein | Chr4:13675853-13676616 FORWARD LENGTH=223 | 201606) HSP 1 Score: 120.553 bits (301), Expect = 2.279e-33 Identity = 70/164 (42.68%), Postives = 91/164 (55.49%), Query Frame = 0
Query: 1 MKKNCELCKAPATTFCESDQASLCWDCDSKIHSANFLVARHVRTLLCHRCQSPTPWKASGATLSNALSLCETC----GCGGGGGRKFEDEQEEESEGDNENEDDDEVDTDFDE----------------------EDEEEEELDGDEDGDNQVVPWSSTAAAPP 138
M K C+LC A +CESDQASLCWDCD K+H ANFLVA+H R LLC CQS TPWKA+G L S+CE+C GGG G + E + E ++ ++D + D + EDE+++E DE+ +NQVVPWS+ A PP
Sbjct: 1 MGKKCDLCNGVARMYCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSACQSLTPWKATGLRLGPTFSVCESCVALKNAGGGRGNRVLSENRGQEEVNSFESEEDRIREDHGDGDDAESYDDDEEEDEDEEYSDDEDEDDDEDGDDEEAENQVVPWSAAAQVPP 164
BLAST of Vfaba.Hedin2.R1.1g053160.1 vs. Araport11
Match: AT5G54470.1 (| B-box type zinc finger family protein | Chr5:22114584-22115315 REVERSE LENGTH=215 | 201606) HSP 1 Score: 111.694 bits (278), Expect = 5.052e-30 Identity = 48/72 (66.67%), Postives = 55/72 (76.39%), Query Frame = 0
Query: 2 KKNCELCKAPATTFCESDQASLCWDCDSKIHSANFLVARHVRTLLCHRCQSPTPWKASGATLSNALSLCETC 73
KK CELC A +CESDQASLCWDCD K+H ANFLVA+H+R LLC CQS TPWKASG L +S+CE+C
Sbjct: 3 KKKCELCCGVARMYCESDQASLCWDCDGKVHGANFLVAKHMRCLLCSACQSHTPWKASGLNLGPTVSICESC 74
BLAST of Vfaba.Hedin2.R1.1g053160.1 vs. Araport11
Match: AT3G21890.1 (| B-box type zinc finger family protein | Chr3:7709298-7709663 REVERSE LENGTH=121 | 201606) HSP 1 Score: 60.4622 bits (145), Expect = 1.098e-11 Identity = 28/50 (56.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query: 5 CELCKAPATTFCESDQASLCWDCDSKIHSANFLVARHVRTLLCHRCQSPT 54
CELC A+ FCE+D A LC CD +H ANFL RHVR +LC CQ T
Sbjct: 31 CELCDGDASVFCEADSAFLCRKCDRWVHGANFLAWRHVRRVLCTSCQKLT 80
BLAST of Vfaba.Hedin2.R1.1g053160.1 vs. Araport11
Match: AT3G21150.1 (| B-box 32 | Chr3:7412713-7413390 REVERSE LENGTH=225 | 201606) HSP 1 Score: 61.6178 bits (148), Expect = 2.843e-11 Identity = 30/63 (47.62%), Postives = 37/63 (58.73%), Query Frame = 0
Query: 1 MKKNCELCKAPATTFCESDQASLCWDCDSKIHSANFLVARHVRTLLCHRCQSPTPWKASGATL 63
M CELC A A C +D A LC CD+K H++NFL ARH R ++C C+S T SG L
Sbjct: 1 MVSFCELCGAEADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCKSLTQNFVSGPLL 63
BLAST of Vfaba.Hedin2.R1.1g053160.1 vs. Araport11
Match: AT1G68190.3 (| B-box zinc finger family protein | Chr1:25559384-25561004 FORWARD LENGTH=356 | 201606) HSP 1 Score: 62.003 bits (149), Expect = 4.814e-11 Identity = 32/81 (39.51%), Postives = 45/81 (55.56%), Query Frame = 0
Query: 1 MKKNCELCKAP-ATTFCESDQASLCWDCDSKIHSANFLVARHVRTLLCHRCQSPTPWKASGATLSNALSLCETCGCGGGGG 80
M++ CE CKA A +C +D A+LC CD+K+HSAN L RH+RT+LC C++ + + LC C GG
Sbjct: 10 MERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCKN---QPCVVRCFDHKMFLCHGCNDKFHGG 87
BLAST of Vfaba.Hedin2.R1.1g053160.1 vs. Araport11
Match: AT1G68190.1 (| B-box zinc finger family protein | Chr1:25559384-25561004 FORWARD LENGTH=356 | 201606) HSP 1 Score: 62.003 bits (149), Expect = 4.814e-11 Identity = 32/81 (39.51%), Postives = 45/81 (55.56%), Query Frame = 0
Query: 1 MKKNCELCKAP-ATTFCESDQASLCWDCDSKIHSANFLVARHVRTLLCHRCQSPTPWKASGATLSNALSLCETCGCGGGGG 80
M++ CE CKA A +C +D A+LC CD+K+HSAN L RH+RT+LC C++ + + LC C GG
Sbjct: 10 MERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCKN---QPCVVRCFDHKMFLCHGCNDKFHGG 87
BLAST of Vfaba.Hedin2.R1.1g053160.1 vs. Araport11
Match: AT1G68190.2 (| B-box zinc finger family protein | Chr1:25559220-25561004 FORWARD LENGTH=385 | 201606) HSP 1 Score: 61.6178 bits (148), Expect = 6.178e-11 Identity = 32/81 (39.51%), Postives = 45/81 (55.56%), Query Frame = 0
Query: 1 MKKNCELCKAP-ATTFCESDQASLCWDCDSKIHSANFLVARHVRTLLCHRCQSPTPWKASGATLSNALSLCETCGCGGGGG 80
M++ CE CKA A +C +D A+LC CD+K+HSAN L RH+RT+LC C++ + + LC C GG
Sbjct: 39 MERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCKNQP---CVVRCFDHKMFLCHGCNDKFHGG 116
BLAST of Vfaba.Hedin2.R1.1g053160.1 vs. Araport11
Match: AT4G15248.1 (| B-box type zinc finger family protein | Chr4:8708881-8709234 FORWARD LENGTH=117 | 201606) HSP 1 Score: 58.5362 bits (140), Expect = 6.390e-11 Identity = 26/51 (50.98%), Postives = 34/51 (66.67%), Query Frame = 0
Query: 4 NCELCKAPATTFCESDQASLCWDCDSKIHSANFLVARHVRTLLCHRCQSPT 54
+CELC AT +CE+D A LC CD +HSANFL RH+R ++C C+ T
Sbjct: 31 SCELCGENATVYCEADAAFLCRKCDRWVHSANFLARRHLRRVICTTCRKLT 81
BLAST of Vfaba.Hedin2.R1.1g053160.1 vs. Araport11
Match: AT2G24790.1 (| CONSTANS-like 3 | Chr2:10566959-10567946 FORWARD LENGTH=294 | 201606) HSP 1 Score: 59.6918 bits (143), Expect = 2.150e-10 Identity = 34/71 (47.89%), Postives = 43/71 (60.56%), Query Frame = 0
Query: 5 CELCKAPATT-FCESDQASLCWDCDSKIHSANFLVARHVRTLLCHRC-QSPTPWKASGATLSNALSLCETC 73
C+ CK+ A T FC +D A LC DCD KIH+AN L +RH R LC C Q+P A ++A +LC TC
Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAP----AHVTCKADAAALCVTC 74
BLAST of Vfaba.Hedin2.R1.1g053160.1 vs. Araport11
Match: AT2G24790.2 (| CONSTANS-like 3 | Chr2:10566959-10567621 FORWARD LENGTH=220 | 201606) HSP 1 Score: 58.151 bits (139), Expect = 5.190e-10 Identity = 34/71 (47.89%), Postives = 43/71 (60.56%), Query Frame = 0
Query: 5 CELCKA-PATTFCESDQASLCWDCDSKIHSANFLVARHVRTLLCHRC-QSPTPWKASGATLSNALSLCETC 73
C+ CK+ AT FC +D A LC DCD KIH+AN L +RH R LC C Q+P A ++A +LC TC
Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAP----AHVTCKADAAALCVTC 74 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.1g053160.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Hedin2.R1.1g053160.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 4
BLAST of Vfaba.Hedin2.R1.1g053160.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.1g053160.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g053160.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g053160.1; organism=Vicia faba; type=mRNA; length=702bpback to top protein sequence of Vfaba.Hedin2.R1.1g053160.1_vfh_v1 >Vfaba.Hedin2.R1.1g053160.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g053160.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g053160.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=233bpback to top mRNA from alignment at chr1S:341712149..341712931- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.1g053160.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g053160.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g053160.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr1S:341712149..341712931- (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
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