Vfaba.Hedin2.R1.1g070400.1

Transcript Overview
NameVfaba.Hedin2.R1.1g070400.1
Unique NameVfaba.Hedin2.R1.1g070400.1_vfh_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length399
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr1Schromosomechr1S:458714179..458714796 -Vicia faba inbred line Hedin/2 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vfhzwsR147Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vfhzwsR170Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
asvfhL119Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL199Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL650Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cavfhL023Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL028Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL487Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvfhL0560Cajanus cajan Asha genome v1.0Cajanus cajan
ccvfhL0906Cajanus cajan Asha genome v1.0Cajanus cajan
pvvfhL139Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvfhL609Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL487Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvfhL493Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvfhL496Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvfhL556Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvfhL417Pisum sativum Cameor genome v1aPisum sativum
tifvfhL071Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuR124Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR171Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvfhL397Vicia faba cv. Tiffany genome v1.0Vicia faba
caivfhL042Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivfhL051Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvfhL0088Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0263Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivfhL657Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvfhL0722Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL1034Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL1124Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
vfhvrvR116Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvssR123Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvuaR112Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR150Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvssR160Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvuaR158Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvfhL023Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL437Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvfhL062Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL142Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL671Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvfhL025Cicer arietinum
carvfhL420Cicer arietinum
ccavfhL074Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL388Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL682Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vfhvumR201Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR210Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR213Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR215Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvvaR144Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvvaR176Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvfhL504Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL563Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL630Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vfhvstR180Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR188Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR196Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvfvfhL137Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL460Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL527Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vfhvunR108Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR154Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.1g070400Vfaba.Hedin2.R1.1g070400_vfh_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.1g070400.1_vfh_v1-exonVfaba.Hedin2.R1.1g070400.1_vfh_v1-exon-chr1S_vfh_v1:458714179..458714388Vicia fabaexon
Vfaba.Hedin2.R1.1g070400.1_vfh_v1-exonVfaba.Hedin2.R1.1g070400.1_vfh_v1-exon-chr1S_vfh_v1:458714608..458714796Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.1g070400.1_vfh_v1-cdsVfaba.Hedin2.R1.1g070400.1_vfh_v1-cds-chr1S_vfh_v1:458714179..458714388Vicia fabaCDS
Vfaba.Hedin2.R1.1g070400.1_vfh_v1-cdsVfaba.Hedin2.R1.1g070400.1_vfh_v1-cds-chr1S_vfh_v1:458714608..458714796Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.1g070400.1_vfh_v1Vfaba.Hedin2.R1.1g070400.1_vfh_v1Vicia fabapolypeptide
Vfaba.Hedin2.R1.1g070400.1_vfh_v1Vfaba.Hedin2.R1.1g070400.1_vfh_v1-proteinVicia fabapolypeptide


Homology
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A4P2W9|A0A6A4P2W9_LUPAL (Histone H2A OS=Lupinus albus OX=3870 GN=Lal_00028728 PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 1.503e-82
Identity = 126/133 (94.74%), Postives = 128/133 (96.24%), Query Frame = 0 
Query:    1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKG-GVDDE 132
            MAGRGKTLGSS  KK+TSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKG   DDE
Sbjct:    1 MAGRGKTLGSSNAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGVAADDE 133
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A4PCG2|A0A6A4PCG2_LUPAL (Histone H2A OS=Lupinus albus OX=3870 GN=Lal_00045694 PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 2.021e-82
Identity = 125/133 (93.98%), Postives = 128/133 (96.24%), Query Frame = 0 
Query:    1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSK-GGVDDE 132
            MAGRGKTLGSST KK+TSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAG+SK    DDE
Sbjct:    1 MAGRGKTLGSSTAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGTSKAAAADDE 133
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2P2JBI5|A0A2P2JBI5_RHIMU (Histone H2A OS=Rhizophora mucronata OX=61149 PE=3 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 2.331e-82
Identity = 123/132 (93.18%), Postives = 125/132 (94.70%), Query Frame = 0 
Query:    1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGVDDE 132
            MAGRGKTLGS   KK+TSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK GSSK   DDE
Sbjct:    1 MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGSSKASADDE 132
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2P2Q624|A0A2P2Q624_RHIMU (Histone H2A OS=Rhizophora mucronata OX=61149 PE=3 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 2.601e-82
Identity = 123/132 (93.18%), Postives = 125/132 (94.70%), Query Frame = 0 
Query:    1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGVDDE 132
            MAGRGKTLGS   KK+TSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK GSSK   DDE
Sbjct:    1 MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGSSKSAADDE 132
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5N6V4|A0A6A5N6V4_LUPAL (Histone H2A OS=Lupinus albus OX=3870 GN=Lal_00003213 PE=3 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 2.689e-82
Identity = 122/132 (92.42%), Postives = 127/132 (96.21%), Query Frame = 0 
Query:    1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGVDDE 132
            MAGRGKTLGS+  KK+TSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAG+SK   DD+
Sbjct:    1 MAGRGKTLGSTAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGTSKAAADDD 132
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3NSE8|A0A2K3NSE8_TRIPR (Histone H2A OS=Trifolium pratense OX=57577 GN=L195_g002426 PE=3 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 6.612e-82
Identity = 124/133 (93.23%), Postives = 127/133 (95.49%), Query Frame = 0 
Query:    1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAG-SSKGGVDDE 132
            MAGRGK +GSS PKK+TSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAG SSK   +DE
Sbjct:    1 MAGRGKNIGSSAPKKATSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSSKAAAEDE 133
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5N6MWY9|A0A5N6MWY9_9ASTR (Histone H2A OS=Mikania micrantha OX=192012 GN=E3N88_27499 PE=3 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 9.811e-82
Identity = 123/132 (93.18%), Postives = 126/132 (95.45%), Query Frame = 0 
Query:    1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGVDDE 132
            MAGRGKTLGS+  KK+TSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK GSSK   DDE
Sbjct:    1 MAGRGKTLGSAAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKVGSSKPASDDE 132
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1J7HH28|A0A1J7HH28_LUPAN (Histone H2A OS=Lupinus angustifolius OX=3871 GN=TanjilG_06301 PE=3 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 9.815e-82
Identity = 124/133 (93.23%), Postives = 127/133 (95.49%), Query Frame = 0 
Query:    1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGV-DDE 132
            MAGRGKTLGSST KK+TSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK G+SK    DDE
Sbjct:    1 MAGRGKTLGSSTAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSKTATADDE 133
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A7C8YBW5|A0A7C8YBW5_OPUST (Histone H2A OS=Opuntia streptacantha OX=393608 PE=3 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 9.919e-82
Identity = 125/132 (94.70%), Postives = 127/132 (96.21%), Query Frame = 0 
Query:    1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGVDDE 132
            MAGRGKTLGS   KK+TSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAG SKGG DDE
Sbjct:    1 MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGGSKGG-DDE 131
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6M3B6|A0A2Z6M3B6_TRISU (Histone H2A OS=Trifolium subterraneum OX=3900 GN=TSUD_101900 PE=3 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 1.003e-81
Identity = 124/133 (93.23%), Postives = 127/133 (95.49%), Query Frame = 0 
Query:    1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAG-SSKGGVDDE 132
            MAGRGK +GSS PKK+TSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAG SSK   +DE
Sbjct:    1 MAGRGKNIGSSAPKKATSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSSKNAAEDE 133
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/Swiss-Prot
Match: sp|O81826|H2A3_ARATH (Probable histone H2A.3 OS=Arabidopsis thaliana OX=3702 GN=At4g27230 PE=1 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 2.237e-82
Identity = 122/131 (93.13%), Postives = 124/131 (94.66%), Query Frame = 0 
Query:    1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGVDD 131
            MAGRGK LGS   KKSTSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSK   +D
Sbjct:    1 MAGRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKPTEED 131
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LD28|H2A6_ARATH (Histone H2A.6 OS=Arabidopsis thaliana OX=3702 GN=RAT5 PE=1 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 1.647e-81
Identity = 120/126 (95.24%), Postives = 123/126 (97.62%), Query Frame = 0 
Query:    1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSK 126
            MAGRGKTLGS   KK+TSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAG+SK
Sbjct:    1 MAGRGKTLGSGGAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGASK 126
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9C681|H2A1_ARATH (Probable histone H2A.1 OS=Arabidopsis thaliana OX=3702 GN=At1g51060 PE=1 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 2.053e-81
Identity = 118/132 (89.39%), Postives = 125/132 (94.70%), Query Frame = 0 
Query:    1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGVDDE 132
            MAGRGKTLGS + KK+T+RS+KAGLQFPVGRIARFLK GKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK G+SK   +D+
Sbjct:    1 MAGRGKTLGSGSAKKATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGASKPSAEDD 132
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LHQ5|H2A2_ARATH (Probable histone H2A.2 OS=Arabidopsis thaliana OX=3702 GN=At3g20670 PE=1 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 7.494e-81
Identity = 119/132 (90.15%), Postives = 124/132 (93.94%), Query Frame = 0 
Query:    1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGVDDE 132
            MAGRGKTLGS   KKSTSRS+KAGLQFPVGRIARFLK GKYA RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIH+LLLPKKAG+SK   D++
Sbjct:    1 MAGRGKTLGSGVAKKSTSRSSKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKKAGASKPSADED 132
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q43312|H2A7_WHEAT (Protein H2A.7 OS=Triticum aestivum OX=4565 GN=H2A-4 PE=2 SV=3)

HSP 1 Score: 228.794 bits (582), Expect = 1.082e-77
Identity = 115/132 (87.12%), Postives = 121/132 (91.67%), Query Frame = 0 
Query:    1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGVDDE 132
            MAGRGK +GS   KK+ SRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELS+LLG VTIA+GGVMPNIHNLLLPKKAG SK    D+
Sbjct:    1 MAGRGKAIGSGAAKKAISRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGMVTIASGGVMPNIHNLLLPKKAGGSKAVAADD 132
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q84NJ4|H2A3_ORYSJ (Probable histone H2A.3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0427700 PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.380e-75
Identity = 111/119 (93.28%), Postives = 115/119 (96.64%), Query Frame = 0 
Query:    1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 119
            MAGRGK +GSS  KK+TSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELS+LLG VTIANGGVMPNIHNLLLP
Sbjct:    1 MAGRGKAIGSSAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGAVTIANGGVMPNIHNLLLP 119
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/Swiss-Prot
Match: sp|A2YVE5|H2A3_ORYSI (Probable histone H2A.3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_028288 PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.380e-75
Identity = 111/119 (93.28%), Postives = 115/119 (96.64%), Query Frame = 0 
Query:    1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 119
            MAGRGK +GSS  KK+TSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELS+LLG VTIANGGVMPNIHNLLLP
Sbjct:    1 MAGRGKAIGSSAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGAVTIANGGVMPNIHNLLLP 119
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q6ZL42|H2A2_ORYSJ (Probable histone H2A.2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0545400 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 2.790e-73
Identity = 108/119 (90.76%), Postives = 113/119 (94.96%), Query Frame = 0 
Query:    1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 119
            MAGRGK +GS   KK+ SRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELS+LLG VTIA+GGVMPNIHNLLLP
Sbjct:    1 MAGRGKAIGSGAAKKAMSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLP 119
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/Swiss-Prot
Match: sp|A2YMC6|H2A2_ORYSI (Probable histone H2A.2 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_025469 PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 2.790e-73
Identity = 108/119 (90.76%), Postives = 113/119 (94.96%), Query Frame = 0 
Query:    1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 119
            MAGRGK +GS   KK+ SRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELS+LLG VTIA+GGVMPNIHNLLLP
Sbjct:    1 MAGRGKAIGSGAAKKAMSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLP 119
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/Swiss-Prot
Match: sp|P35063|H2AX_PICAB (Histone H2AX OS=Picea abies OX=3329 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 5.220e-70
Identity = 107/127 (84.25%), Postives = 112/127 (88.19%), Query Frame = 0 
Query:    3 GRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGV 129
            GRGK    +   KS SRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH +LLPKK+G  KG +
Sbjct:    9 GRGK----AKSTKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQVLLPKKSGKDKGEI 131
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. Araport11
Match: AT4G27230.2 (| histone H2A 2 | Chr4:13637515-13638325 REVERSE LENGTH=131 | 201606)

HSP 1 Score: 240.35 bits (612), Expect = 2.288e-83
Identity = 122/131 (93.13%), Postives = 124/131 (94.66%), Query Frame = 0 
Query:    1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGVDD 131
            MAGRGK LGS   KKSTSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSK   +D
Sbjct:    1 MAGRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKPTEED 131
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. Araport11
Match: AT4G27230.1 (| histone H2A 2 | Chr4:13637515-13638325 REVERSE LENGTH=131 | 201606)

HSP 1 Score: 240.35 bits (612), Expect = 2.288e-83
Identity = 122/131 (93.13%), Postives = 124/131 (94.66%), Query Frame = 0 
Query:    1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGVDD 131
            MAGRGK LGS   KKSTSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSK   +D
Sbjct:    1 MAGRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKPTEED 131
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. Araport11
Match: AT5G54640.1 (| Histone superfamily protein | Chr5:22196540-22197279 FORWARD LENGTH=130 | 201606)

HSP 1 Score: 238.424 bits (607), Expect = 1.685e-82
Identity = 120/126 (95.24%), Postives = 123/126 (97.62%), Query Frame = 0 
Query:    1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSK 126
            MAGRGKTLGS   KK+TSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAG+SK
Sbjct:    1 MAGRGKTLGSGGAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGASK 126
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. Araport11
Match: AT1G51060.1 (| histone H2A 10 | Chr1:18926948-18927443 FORWARD LENGTH=132 | 201606)

HSP 1 Score: 238.039 bits (606), Expect = 2.100e-82
Identity = 118/132 (89.39%), Postives = 125/132 (94.70%), Query Frame = 0 
Query:    1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGVDDE 132
            MAGRGKTLGS + KK+T+RS+KAGLQFPVGRIARFLK GKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK G+SK   +D+
Sbjct:    1 MAGRGKTLGSGSAKKATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGASKPSAEDD 132
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. Araport11
Match: AT3G20670.1 (| histone H2A 13 | Chr3:7229472-7229963 FORWARD LENGTH=132 | 201606)

HSP 1 Score: 236.884 bits (603), Expect = 7.667e-82
Identity = 119/132 (90.15%), Postives = 124/132 (93.94%), Query Frame = 0 
Query:    1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGVDDE 132
            MAGRGKTLGS   KKSTSRS+KAGLQFPVGRIARFLK GKYA RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIH+LLLPKKAG+SK   D++
Sbjct:    1 MAGRGKTLGSGVAKKSTSRSSKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKKAGASKPSADED 132
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. Araport11
Match: AT1G54690.1 (| gamma histone variant H2AX | Chr1:20414607-20415206 REVERSE LENGTH=142 | 201606)

HSP 1 Score: 208.764 bits (530), Expect = 1.042e-70
Identity = 109/131 (83.21%), Postives = 114/131 (87.02%), Query Frame = 0 
Query:    2 AGRGKTLGS-STPK--KSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGV 129
            AG G T G    PK  KS SRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH  LLP K G +KG +
Sbjct:    5 AGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVGKNKGDI 135
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. Araport11
Match: AT1G08880.1 (| Histone superfamily protein | Chr1:2847144-2847676 REVERSE LENGTH=142 | 201606)

HSP 1 Score: 207.608 bits (527), Expect = 3.154e-70
Identity = 108/131 (82.44%), Postives = 114/131 (87.02%), Query Frame = 0 
Query:    2 AGRGKTLGS-STPK--KSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGV 129
            AG G T G    PK  KS SRS+KAGLQFPVGRIARFLK+GKYAERVGAGAPVYL+AVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH  LLP K G +KG +
Sbjct:    5 AGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVGKNKGDI 135
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. Araport11
Match: AT5G59870.1 (| histone H2A 6 | Chr5:24115605-24116144 REVERSE LENGTH=150 | 201606)

HSP 1 Score: 177.948 bits (450), Expect = 2.795e-58
Identity = 84/110 (76.36%), Postives = 100/110 (90.91%), Query Frame = 0 
Query:   15 KSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGS 124
            KS S+S KAGLQFPVGRI RFLK G+YA+R+G GAPVY+AAVLEYLAAEVLELAGNAARDNKK+RI+PRH+ LA+RNDEEL KLL  VTIA+GGV+PNI+++LLPKK+ +
Sbjct:   23 KSVSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLPKKSAT 132
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. Araport11
Match: AT5G02560.1 (| histone H2A 12 | Chr5:575437-576456 FORWARD LENGTH=153 | 201606)

HSP 1 Score: 173.326 bits (438), Expect = 1.992e-56
Identity = 84/109 (77.06%), Postives = 96/109 (88.07%), Query Frame = 0 
Query:   14 KKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKA 122
            KK  SRS K+GLQFPVGRI R+LK G+Y++RVG GAPVYLAAVLEYLAAEVLELAGNAARDNKK RI+PRH+ LAVRNDEEL  LL  VTIA+GGV+PNI+ +LLPKK+
Sbjct:   22 KKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKS 130
[Close]
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. Araport11
Match: AT5G27670.1 (| histone H2A 7 | Chr5:9792807-9793365 REVERSE LENGTH=150 | 201606)

HSP 1 Score: 172.555 bits (436), Expect = 3.236e-56
Identity = 86/112 (76.79%), Postives = 99/112 (88.39%), Query Frame = 0 
Query:   14 KKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSS 125
            KKS S+S KAGLQFPVGRIAR+LK G+YA R G+GAPVYLAAVLEYLAAEVLELAGNAARDNKK RI PRH+ LA+RNDEEL +LL  VTIA+GGV+PNI+ +LLPKK+ +S
Sbjct:   23 KKSVSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLPKKSTAS 134
The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A6A4P2W9|A0A6A4P2W9_LUPAL1.503e-8294.74Histone H2A OS=Lupinus albus OX=3870 GN=Lal_000287... [more]
tr|A0A6A4PCG2|A0A6A4PCG2_LUPAL2.021e-8293.98Histone H2A OS=Lupinus albus OX=3870 GN=Lal_000456... [more]
tr|A0A2P2JBI5|A0A2P2JBI5_RHIMU2.331e-8293.18Histone H2A OS=Rhizophora mucronata OX=61149 PE=3 ... [more]
tr|A0A2P2Q624|A0A2P2Q624_RHIMU2.601e-8293.18Histone H2A OS=Rhizophora mucronata OX=61149 PE=3 ... [more]
tr|A0A6A5N6V4|A0A6A5N6V4_LUPAL2.689e-8292.42Histone H2A OS=Lupinus albus OX=3870 GN=Lal_000032... [more]
tr|A0A2K3NSE8|A0A2K3NSE8_TRIPR6.612e-8293.23Histone H2A OS=Trifolium pratense OX=57577 GN=L195... [more]
tr|A0A5N6MWY9|A0A5N6MWY9_9ASTR9.811e-8293.18Histone H2A OS=Mikania micrantha OX=192012 GN=E3N8... [more]
tr|A0A1J7HH28|A0A1J7HH28_LUPAN9.815e-8293.23Histone H2A OS=Lupinus angustifolius OX=3871 GN=Ta... [more]
tr|A0A7C8YBW5|A0A7C8YBW5_OPUST9.919e-8294.70Histone H2A OS=Opuntia streptacantha OX=393608 PE=... [more]
tr|A0A2Z6M3B6|A0A2Z6M3B6_TRISU1.003e-8193.23Histone H2A OS=Trifolium subterraneum OX=3900 GN=T... [more]
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BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|O81826|H2A3_ARATH2.237e-8293.13Probable histone H2A.3 OS=Arabidopsis thaliana OX=... [more]
sp|Q9LD28|H2A6_ARATH1.647e-8195.24Histone H2A.6 OS=Arabidopsis thaliana OX=3702 GN=R... [more]
sp|Q9C681|H2A1_ARATH2.053e-8189.39Probable histone H2A.1 OS=Arabidopsis thaliana OX=... [more]
sp|Q9LHQ5|H2A2_ARATH7.494e-8190.15Probable histone H2A.2 OS=Arabidopsis thaliana OX=... [more]
sp|Q43312|H2A7_WHEAT1.082e-7787.12Protein H2A.7 OS=Triticum aestivum OX=4565 GN=H2A-... [more]
sp|Q84NJ4|H2A3_ORYSJ1.380e-7593.28Probable histone H2A.3 OS=Oryza sativa subsp. japo... [more]
sp|A2YVE5|H2A3_ORYSI1.380e-7593.28Probable histone H2A.3 OS=Oryza sativa subsp. indi... [more]
sp|Q6ZL42|H2A2_ORYSJ2.790e-7390.76Probable histone H2A.2 OS=Oryza sativa subsp. japo... [more]
sp|A2YMC6|H2A2_ORYSI2.790e-7390.76Probable histone H2A.2 OS=Oryza sativa subsp. indi... [more]
sp|P35063|H2AX_PICAB5.220e-7084.25Histone H2AX OS=Picea abies OX=3329 PE=2 SV=1[more]
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BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
AT4G27230.22.288e-8393.13| histone H2A 2 | Chr4:13637515-13638325 REVERSE L... [more]
AT4G27230.12.288e-8393.13| histone H2A 2 | Chr4:13637515-13638325 REVERSE L... [more]
AT5G54640.11.685e-8295.24| Histone superfamily protein | Chr5:22196540-2219... [more]
AT1G51060.12.100e-8289.39| histone H2A 10 | Chr1:18926948-18927443 FORWARD ... [more]
AT3G20670.17.667e-8290.15| histone H2A 13 | Chr3:7229472-7229963 FORWARD LE... [more]
AT1G54690.11.042e-7083.21| gamma histone variant H2AX | Chr1:20414607-20415... [more]
AT1G08880.13.154e-7082.44| Histone superfamily protein | Chr1:2847144-28476... [more]
AT5G59870.12.795e-5876.36| histone H2A 6 | Chr5:24115605-24116144 REVERSE L... [more]
AT5G02560.11.992e-5677.06| histone H2A 12 | Chr5:575437-576456 FORWARD LENG... [more]
AT5G27670.13.236e-5676.79| histone H2A 7 | Chr5:9792807-9793365 REVERSE LEN... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 44..59
score: 90.36
coord: 73..87
score: 78.86
coord: 15..37
score: 69.15
coord: 59..72
score: 89.46
coord: 101..119
score: 66.52
IPR002119Histone H2APANTHERPTHR23430HISTONE H2Acoord: 10..121
IPR002119Histone H2ACDDcd00074H2Acoord: 9..121
e-value: 2.87763E-68
score: 199.484
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 9..90
e-value: 8.1E-14
score: 52.0
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 93..126
e-value: 3.0E-18
score: 65.3
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 1..128
e-value: 4.3E-64
score: 216.1
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 17..121
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..23

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Hedin2.R1.1g070400.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g070400.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g070400.1; organism=Vicia faba; type=mRNA; length=399bp
ATGGCGGGTAGAGGCAAAACCCTAGGTTCCAGCACTCCCAAGAAATCAAC
CTCAAGGAGCAACAAGGCCGGCCTCCAGTTCCCCGTTGGCCGTATTGCTC
GTTTCCTCAAGGCCGGCAAATACGCAGAGCGCGTTGGTGCTGGTGCTCCG
GTCTACCTTGCCGCCGTTCTGGAATATCTCGCTGCTGAGGTTTTGGAATT
GGCTGGAAATGCTGCAAGGGACAACAAGAAGACTAGAATTGTGCCAAGAC
ATATTCAATTGGCTGTTAGGAATGATGAGGAATTGAGCAAGCTTCTTGGG
GATGTTACCATTGCCAATGGTGGTGTGATGCCCAATATCCACAACCTGTT
GCTTCCAAAGAAAGCTGGTTCCTCCAAGGGTGGTGTTGATGATGAGTAA
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protein sequence of Vfaba.Hedin2.R1.1g070400.1_vfh_v1

>Vfaba.Hedin2.R1.1g070400.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g070400.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g070400.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=132bp
MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAP
VYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLG
DVTIANGGVMPNIHNLLLPKKAGSSKGGVDDE
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mRNA from alignment at chr1S:458714179..458714796-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Hedin2.R1.1g070400.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g070400.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g070400.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr1S:458714179..458714796- (Vicia faba
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR007125Histone_H2A/H2B/H3
IPR032454Histone_H2A_C
IPR009072Histone-fold
Vocabulary: Molecular Function
TermDefinition
GO:0030527structural constituent of chromatin
GO:0003677DNA binding
GO:0046982protein heterodimerization activity
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome