Vfaba.Hedin2.R1.2g168360.1

Transcript Overview
NameVfaba.Hedin2.R1.2g168360.1
Unique NameVfaba.Hedin2.R1.2g168360.1_vfh_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length501
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr2chromosomechr2:1053704374..1053704874 -Vicia faba inbred line Hedin/2 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vfhzwsR204Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vfhzwsR230Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vfhzwsR246Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
asvfhL034Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL213Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL728Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL784Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cavfhL283Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL402Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL622Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL687Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvfhL0733Cajanus cajan Asha genome v1.0Cajanus cajan
crvfhL052Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL013Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvfhL329Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL360Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvfhL795Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvfhL472Pisum sativum Cameor genome v1aPisum sativum
vfhvfhR124Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvfhL144Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvfhL212Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuR230Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR268Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR308Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvfhL0329Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivfhL551Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvfhL0373Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0659Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0745Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0753Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
vfhvrvR271Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR296Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR314Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvssR230Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvuaR259Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvuaR268Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR270Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvfhL232Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL353Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvfhL270Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL596Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL746Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL810Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvfhL238Cicer arietinum
carvfhL327Cicer arietinum
ccavfhL151Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL312Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL488Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vfhvumR228Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR263Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR272Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR323Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvvaR255Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvvaR290Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvfhL039Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL137Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL233Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL349Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vfhvstR219Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR233Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR245Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR296Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvfvfhL013Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL258Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL346Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL778Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vfhvunR211Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR249Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR287Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vigun09g234300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigan.02G049400.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
LR48_mrnaVigan09g012700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-TanjilR_08211Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.001G025400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vum_03G01871.1Vigna umbellata FF25 genome v1.0Vigna umbellata
evm.model.Chr08.464Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
PvulFLAVERTChr01.1000191Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Va04G067410.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigan.03G266000.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Ca_18353Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Cc_v2.0_07236.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Phvul.009G068700.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Cr_02806.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-XM_004498961.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
jg35371.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun08g028200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
jg54989.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vum_02G00417.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Cr_09431.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_14872.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
rna-TanjilR_30616Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
evm.model.Chr09.1407Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Psat06G0037800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-XM_004501488.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
LR48_mrnaVigan07g267500Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-KK1_009678Cajanus cajan Asha genome v1.0Cajanus cajan
Vigun09g234300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun08g028200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigst.03G168700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
XM_058927159.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Cc_v2.0_10744.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
XM_058869152.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Va07G067860.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_022782529.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigst.02G040600.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-TanjilR_09803Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_014644668.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Psat05G0141300-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Ca_01567Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
PvulFLAVERTChr09.1000454Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.3g221760.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.2g135520.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g168360Vfaba.Hedin2.R1.2g168360_vfh_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g168360.1_vfh_v1-exonVfaba.Hedin2.R1.2g168360.1_vfh_v1-exon-chr2_vfh_v1:1053704374..1053704874Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g168360.1_vfh_v1-cdsVfaba.Hedin2.R1.2g168360.1_vfh_v1-cds-chr2_vfh_v1:1053704374..1053704874Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g168360.1_vfh_v1Vfaba.Hedin2.R1.2g168360.1_vfh_v1Vicia fabapolypeptide
Vfaba.Hedin2.R1.2g168360.1_vfh_v1Vfaba.Hedin2.R1.2g168360.1_vfh_v1-proteinVicia fabapolypeptide


Homology
BLAST of Vfaba.Hedin2.R1.2g168360.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3MSK5|A0A2K3MSK5_TRIPR (MFP1 attachment factor 1-like protein OS=Trifolium pratense OX=57577 GN=L195_g016969 PE=4 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 9.724e-85
Identity = 130/164 (79.27%), Postives = 147/164 (89.63%), Query Frame = 0
Query:    1 MSDPEVTTAATSEQDSSASP--EQNGDQTKLSSAGFSIWPPTQRTRDAVITRLIETLTTPSVLSKRYGTLPSDEAASAARQIEDEAYSVASDSGAPDGGDGIEILQVYSKEISKRMLETVKARPTIGSNAVDNDAAEAPPSEDRPSSSPKAEDAPETGKIETEA 162
            MSD E+TT  TS+QDSS++P  +QNG QTKL+SAGFSIWPPTQRTRDAVI RLIETLTTPSVLSKRYGTL  +EAA++ARQIE EAYS+A DS APDGGDGI+ILQVYSKEISKRMLETVKARPT GSNAVD+DAAEAPP++D PSSSP  +DA +TGKIET+A
Sbjct:    1 MSDSEITTVTTSDQDSSSAPPPQQNGAQTKLNSAGFSIWPPTQRTRDAVINRLIETLTTPSVLSKRYGTLLPEEAATSARQIESEAYSIAGDSAAPDGGDGIDILQVYSKEISKRMLETVKARPTTGSNAVDHDAAEAPPADDPPSSSPTGDDASDTGKIETDA 164          
BLAST of Vfaba.Hedin2.R1.2g168360.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y9L8|A0A1S2Y9L8_CICAR (MFP1 attachment factor 1 OS=Cicer arietinum OX=3827 GN=LOC101508679 PE=4 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 2.428e-78
Identity = 131/164 (79.88%), Postives = 142/164 (86.59%), Query Frame = 0
Query:    1 MSDPEVTTAATSEQDSSASPEQNGDQTKLSSAGFSIWPPTQRTRDAVITRLIETLTTPSVLSKRYGTLPSDEAASAARQIEDEAYSVASDSGAPDGGDGIEILQVYSKEISKRMLETVKARPTIGSNAVDNDAAEAPPSEDRPSSSPKAEDAPETGKIETEAET 164
            MSDPE+      EQ+S++ P+QNGDQ KL   GFSIWPPTQRTRDAVI RLIETLTTPSVLSKRYGTLP DEA++AARQIEDEAYS+A DS APDGGDGIEILQVYSKEISKRMLETVKARPTIGS AVDN A EAPPS+D PSSSP  EDAP+TGKIETE +T
Sbjct:    1 MSDPEIAPEPQPEQNSASPPQQNGDQPKLIPGGFSIWPPTQRTRDAVINRLIETLTTPSVLSKRYGTLPPDEASAAARQIEDEAYSIAGDSAAPDGGDGIEILQVYSKEISKRMLETVKARPTIGSTAVDNGAVEAPPSDDPPSSSPTTEDAPDTGKIETETDT 164          
BLAST of Vfaba.Hedin2.R1.2g168360.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072V335|A0A072V335_MEDTR (MFP1 attachment factor-like protein OS=Medicago truncatula OX=3880 GN=25489916 PE=4 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 2.477e-78
Identity = 124/164 (75.61%), Postives = 137/164 (83.54%), Query Frame = 0
Query:    1 MSDPEVTTAATSEQDSSASPEQNGDQTKLSSAGFSIWPPTQRTRDAVITRLIETLTTPSVLSKRYGTLPSDEAASAARQIEDEAYSVASDSGAPDGGDGIEILQVYSKEISKRMLETVKARPTIGSNAVDNDAAEAPPSEDRPSSSPKAEDAPETGKIETEAET 164
            MSD EVTT  +S+ +S   P+QNGDQTK  SAGFSIWPPTQRTRDAVITRLIETLTTPSVLSKRYGTLPSDEA SAARQIE++A+SVA DS  PDGGDGIEILQVYSKEISK+MLETVKARPT+ S+AVD D+A   P+ D P   P AEDA E+ KIETE ET
Sbjct:    1 MSDSEVTTVTSSDSNSVPPPQQNGDQTKPPSAGFSIWPPTQRTRDAVITRLIETLTTPSVLSKRYGTLPSDEAVSAARQIEEDAFSVAGDSAVPDGGDGIEILQVYSKEISKKMLETVKARPTVDSSAVDKDSAAVAPTVDDP---PSAEDAAESAKIETETET 161          
BLAST of Vfaba.Hedin2.R1.2g168360.1 vs. UniProtKB/TrEMBL
Match: tr|A0A392SG76|A0A392SG76_9FABA (MFP1 attachment factor 1-like (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 6.178e-52
Identity = 86/105 (81.90%), Postives = 96/105 (91.43%), Query Frame = 0
Query:   51 LIETLTTPSVLSKRYGTLPSDEAASAARQIEDEAYSVASDSGAPDGGDGIEILQVYSKEISKRMLETVKARPTIGSNAVDNDAAEAPPSEDRPSSSPKAEDAPET 155
            LIETLTTPSVLSKRYGTL  +EAA+AARQIE EAYS+A +S APDGGDGI+ILQVYSKEISKRMLETVKARP+IGSNAVDNDAAEAPP++D PSSSP  +DA +T
Sbjct:    1 LIETLTTPSVLSKRYGTLLPEEAATAARQIEHEAYSIAGESAAPDGGDGIDILQVYSKEISKRMLETVKARPSIGSNAVDNDAAEAPPADDPPSSSPTGDDASDT 105          
BLAST of Vfaba.Hedin2.R1.2g168360.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4P1QWH8|A0A4P1QWH8_LUPAN (WPP domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_09803 PE=4 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.564e-50
Identity = 94/141 (66.67%), Postives = 108/141 (76.60%), Query Frame = 0
Query:    1 MSDPEVTTAATSEQDSSASPEQNGDQTKLSSAGFSIWPPTQRTRDAVITRLIETLTTPSVLSKRYGTLPSDEAASAARQIEDEAYSVASDSGAPDGGDGIEILQVYSKEISKRMLETVKARPTIGSNAVDND--AAEAPPS 139
            MSDPE T AA SE  SSA P ++      S+  FSIWPPTQRTRDAVI RLI+TL++PSVLSKRYGTL SDE+A+AARQIEDEA++ AS   A    DGIEILQVYSKEISKRML+ VKA+    S+AVDN   A+EAPPS
Sbjct:    1 MSDPENTPAAPSEPPSSAEPPKSNHDQHPSTTSFSIWPPTQRTRDAVINRLIQTLSSPSVLSKRYGTLSSDESAAAARQIEDEAFTTAS---AASEEDGIEILQVYSKEISKRMLDIVKAKANTPSSAVDNGVAASEAPPS 138          
BLAST of Vfaba.Hedin2.R1.2g168360.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6NJA8|A0A2Z6NJA8_TRISU (WPP domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_316560 PE=4 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.350e-48
Identity = 82/101 (81.19%), Postives = 91/101 (90.10%), Query Frame = 0
Query:    1 MSDPEVTTAATSEQDSSASP--EQNGDQTKLSSAGFSIWPPTQRTRDAVITRLIETLTTPSVLSKRYGTLPSDEAASAARQIEDEAYSVASDSGAPDGGDG 99
            MSD E+TT  TS+QDSS++P  +QNGDQTKL+SAGFSIWPPTQRTRDAVITRLIETLTTPSVLSKRYGTL  +EAA+AARQIE+EAYSVA DS APDG DG
Sbjct:    1 MSDSEITTVTTSDQDSSSAPPPQQNGDQTKLNSAGFSIWPPTQRTRDAVITRLIETLTTPSVLSKRYGTLLPEEAATAARQIENEAYSVAGDSAAPDGSDG 101          
BLAST of Vfaba.Hedin2.R1.2g168360.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3U2D8|A0A1S3U2D8_VIGRR (MFP1 attachment factor 1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106761153 PE=4 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 2.262e-47
Identity = 93/152 (61.18%), Postives = 110/152 (72.37%), Query Frame = 0
Query:    1 MSDPEVTTAATSEQDS---SASPEQN---GDQTKL--SSAGFSIWPPTQRTRDAVITRLIETLTTPSVLSKRYGTLPSDEAASAARQIEDEAYSVASDSGAPDGGDGIEILQVYSKEISKRMLETVKARPTIGSNAVDNDAAEAPPSEDRPS 144
            MS+PE      SEQDS   S  P Q+       KL  +S  F+IWPPTQRTRDAVI RLIETL++PSVLSKRYGT+P +EA++AA QIE+EA++VA  S   D  DGIEILQVYSKEISKRML+TVK++ T GS AVDN  AE P SE  P+
Sbjct:    1 MSEPENAPEPQSEQDSVSPSKLPTQDQPAAAAAKLGPASVTFTIWPPTQRTRDAVINRLIETLSSPSVLSKRYGTMPPEEASAAAHQIENEAFAVAGGSSTSD-SDGIEILQVYSKEISKRMLDTVKSKATTGSTAVDNGVAENPTSEVAPT 151          
BLAST of Vfaba.Hedin2.R1.2g168360.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1J7IP67|A0A1J7IP67_LUPAN (WPP domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_12930 PE=4 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.584e-46
Identity = 90/152 (59.21%), Postives = 108/152 (71.05%), Query Frame = 0
Query:    1 MSDPEVTTAATSEQDSSASPEQNGD-----------QTKLSSAGFSIWPPTQRTRDAVITRLIETLTTPSVLSKRYGTLPSDEAASAARQIEDEAYSVASDSGAPDGGDGIEILQVYSKEISKRMLETVKARPTIGSNAVDNDAAEAPPSED 141
            MS+PE+T A  S+ D++  P Q  +            TK S+  FS+WPPTQRTRDAVI RLIETL+TPSVLSKRYGTL SDEA++AARQIE+EA+ VA+ + A D  DGIEILQ YSKEISKRM++TVKAR    S AVDN  A    +ED
Sbjct:    1 MSNPEITPAPVSDHDTTLPPPQQMEAPPQPNTPPNPSTKASAISFSVWPPTQRTRDAVINRLIETLSTPSVLSKRYGTLTSDEASAAARQIEEEAF-VAAGASASDDEDGIEILQAYSKEISKRMIDTVKARAPPAS-AVDNGGASVVTTED 150          
BLAST of Vfaba.Hedin2.R1.2g168360.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5MAK3|A0A6A5MAK3_LUPAL (WPP domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_00020398 PE=4 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 3.042e-46
Identity = 87/131 (66.41%), Postives = 100/131 (76.34%), Query Frame = 0
Query:    1 MSDPEVTTAATSEQDSSASPEQNGDQTKLSSAGFSIWPPTQRTRDAVITRLIETLTTPSVLSKRYGTLPSDEAASAARQIEDEAYSVASDSGAPDGGDGIEILQVYSKEISKRMLETVKARPTIGSNAVDN 131
            MSDPE T A  SE  S A P Q+      ++  FSIWPPTQRTRDAVI RLI+TL+TPSVLSKRYGTL SDE+++AARQIEDEA++ AS   A    DGIEILQVYSKEISKRML+ VKA+ T  S+AVDN
Sbjct:    1 MSDPENTPATPSEPVSFAEPPQSNHDQYPTTTSFSIWPPTQRTRDAVINRLIQTLSTPSVLSKRYGTLSSDESSAAARQIEDEAFTTAS---AASEEDGIEILQVYSKEISKRMLDIVKAKATAPSSAVDN 128          
BLAST of Vfaba.Hedin2.R1.2g168360.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151TTY3|A0A151TTY3_CAJCA (MFP1 attachment factor 1 OS=Cajanus cajan OX=3821 GN=KK1_009678 PE=4 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.414e-46
Identity = 99/169 (58.58%), Postives = 117/169 (69.23%), Query Frame = 0
Query:    1 MSDPEVTTAATSEQDSSASPEQNGDQTKLSSA-------GFSIWPPTQRTRDAVITRLIETLTTPSVLSKRYGTLPSDEAASAARQIEDEAYSVASDSGAPDGGDGIEILQVYSKEISKRMLETVKARPTIGSNAVDNDAAEAPPSEDRPSSSPKAE-DAPETGKIETE 161
            MSD E+T    SEQD++  P+   DQ   S+A        FSIWPPTQRTRDAVI RLIETL+TPSVLSKRYGT+  DEA++AARQIE+EA++VA  S A D  DGIEILQVYSKEISKRML+TVKA+ T    AVDN  A+   S+   + SP AE D   T   E+E
Sbjct:    1 MSDSEITPPPQSEQDTAPPPQPAQDQPPPSAAKLGHTGVSFSIWPPTQRTRDAVINRLIETLSTPSVLSKRYGTMAPDEASAAARQIEEEAFAVAGGSTASD-NDGIEILQVYSKEISKRMLDTVKAKSTAAPTAVDNGDAQTTASD--LAHSPTAESDTAATATTESE 166          
BLAST of Vfaba.Hedin2.R1.2g168360.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9M7N6|MAF1_SOLLC (MFP1 attachment factor 1 OS=Solanum lycopersicum OX=4081 GN=MAF1 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.370e-41
Identity = 68/96 (70.83%), Postives = 80/96 (83.33%), Query Frame = 0
Query:   26 QTKLSSAGFSIWPPTQRTRDAVITRLIETLTTPSVLSKRYGTLPSDEAASAARQIEDEAYSVASDSGAPDGGDGIEILQVYSKEISKRMLETVKAR 121
            Q K  +  FSIWPPTQRTRDAVI RLIE+L+TPS+LSKRYGTLP DEA+  AR IE+EA++ A+ S A D  DGIEILQVYSKEISKRM++TVK+R
Sbjct:   18 QNKPMTTSFSIWPPTQRTRDAVINRLIESLSTPSILSKRYGTLPQDEASETARLIEEEAFA-AAGSTASDADDGIEILQVYSKEISKRMIDTVKSR 112          
BLAST of Vfaba.Hedin2.R1.2g168360.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9C500|WPP2_ARATH (WPP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=WPP2 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.834e-38
Identity = 75/150 (50.00%), Postives = 104/150 (69.33%), Query Frame = 0
Query:    1 MSDPEVTTAATSEQDSSASPEQNGDQTKLSSAGFSIWPPTQRTRDAVITRLIETLTTPSVLSKRYGTLPSDEAASAARQIEDEAYSVASDSGAPDGGDGIEILQVYSKEISKRMLETVKAR--PTIGSNAVDN---DAAEAPPSEDRPSS 145
            M+DP    AA+ + D +   E    + K       IWPPTQ+TRDAV+ RLIETL+T S+LSKRYGTL SD+A + A+ IE+EAY VAS++ + D  DGI+IL++YSKEISKRMLE+VKAR   ++G+ +V++   DA+E    +  P+S
Sbjct:   28 MTDPTSQEAASKDTDLTKEAES---EKKPGGISLRIWPPTQKTRDAVLNRLIETLSTESILSKRYGTLKSDDATTVAKLIEEEAYGVASNAVSSD-DDGIKILELYSKEISKRMLESVKARSNASVGNGSVEDANTDASEVSKDDAGPAS 173          
BLAST of Vfaba.Hedin2.R1.2g168360.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FMH6|WPP1_ARATH (WPP domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=WPP1 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 8.020e-36
Identity = 61/93 (65.59%), Postives = 76/93 (81.72%), Query Frame = 0
Query:   34 FSIWPPTQRTRDAVITRLIETLTTPSVLSKRYGTLPSDEAASAARQIEDEAYSVASDSGAPDGGDGIEILQVYSKEISKRMLETVKARPTIGS 126
              IWPPTQ+TRDAVI RLIETL+T S+LSKR+G+L S+EA+S A+ IEDEAY++AS +   D  DGIEIL+ YSKEISKRMLE+VKA+  + S
Sbjct:   42 LRIWPPTQKTRDAVINRLIETLSTESILSKRFGSLESEEASSVAKSIEDEAYAIASATVFGD-DDGIEILKAYSKEISKRMLESVKAKSNVAS 133          
BLAST of Vfaba.Hedin2.R1.2g168360.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q0WQ91|WPP3_ARATH (WPP domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=WPP3 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.295e-21
Identity = 40/88 (45.45%), Postives = 64/88 (72.73%), Query Frame = 0
Query:   34 FSIWPPTQRTRDAVITRLIETLTTPSVLSKRYGTLPSDEAASAARQIEDEAYSVASDSGAPDGGDGIEILQVYSKEISKRMLETVKAR 121
            FS+WPP Q++RD V+  +I+TL+T S+LS +YGT+  +EA++ A+ IE++AY +AS   +    DGI+ L+VY  E S+RM+E+ + R
Sbjct:   51 FSVWPPCQKSRDYVVNSMIKTLSTDSILSYKYGTIKPEEASAVAKSIEEKAYDIASRFVS---SDGIKNLEVYGIETSERMIESAEVR 135          
BLAST of Vfaba.Hedin2.R1.2g168360.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LE82|RAGP1_ARATH (RAN GTPase-activating protein 1 OS=Arabidopsis thaliana OX=3702 GN=RANGAP1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.742e-16
Identity = 37/89 (41.57%), Postives = 58/89 (65.17%), Query Frame = 0
Query:   36 IWPPTQRTRDAVITRLIETLTTPSVLSKRYGTLPSDEAASAARQIEDEAYSVASDS--GAPDGGDGIEILQVYSKEISKRMLETVKARP 122
            +WPP++ TR  ++ R+ + +TTPS+ S++YG L  +EA   A++IED A++ A+      PD GDG   + VY+KE SK ML+ +K  P
Sbjct:   17 MWPPSKSTRLMLVERMTKNITTPSIFSRKYGLLSVEEAEQDAKRIEDLAFATANKHFQNEPD-GDGTSAVHVYAKESSKLMLDVIKRGP 104          
BLAST of Vfaba.Hedin2.R1.2g168360.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9M651|RAGP2_ARATH (RAN GTPase-activating protein 2 OS=Arabidopsis thaliana OX=3702 GN=RANGAP2 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 5.164e-14
Identity = 38/94 (40.43%), Postives = 59/94 (62.77%), Query Frame = 0
Query:   34 FSI--WPPTQRTRDAVITRLIETLTTPSVLSKRYGTLPSDEAASAARQIEDEAYSVASDSG--APDGGDGIEILQVYSKEISKRMLETVKARPT 123
            FSI  WPP+  TR A+I R+    ++ ++ +++YG+L  D+A   A++IED A+S A+      PD GDG   +Q+Y+KE SK +LE +K  P 
Sbjct:   12 FSIKLWPPSLPTRKALIERITNNFSSKTIFTEKYGSLTKDQATENAKRIEDIAFSTANQQFEREPD-GDGGSAVQLYAKECSKLILEVLKKGPV 104          
BLAST of Vfaba.Hedin2.R1.2g168360.1 vs. Araport11
Match: AT1G47200.1 (| WPP domain protein 2 | Chr1:17298181-17298723 REVERSE LENGTH=180 | 201606)

HSP 1 Score: 132.494 bits (332), Expect = 1.877e-39
Identity = 75/150 (50.00%), Postives = 104/150 (69.33%), Query Frame = 0
Query:    1 MSDPEVTTAATSEQDSSASPEQNGDQTKLSSAGFSIWPPTQRTRDAVITRLIETLTTPSVLSKRYGTLPSDEAASAARQIEDEAYSVASDSGAPDGGDGIEILQVYSKEISKRMLETVKAR--PTIGSNAVDN---DAAEAPPSEDRPSS 145
            M+DP    AA+ + D +   E    + K       IWPPTQ+TRDAV+ RLIETL+T S+LSKRYGTL SD+A + A+ IE+EAY VAS++ + D  DGI+IL++YSKEISKRMLE+VKAR   ++G+ +V++   DA+E    +  P+S
Sbjct:   28 MTDPTSQEAASKDTDLTKEAES---EKKPGGISLRIWPPTQKTRDAVLNRLIETLSTESILSKRYGTLKSDDATTVAKLIEEEAYGVASNAVSSD-DDGIKILELYSKEISKRMLESVKARSNASVGNGSVEDANTDASEVSKDDAGPAS 173          
BLAST of Vfaba.Hedin2.R1.2g168360.1 vs. Araport11
Match: AT5G43070.1 (| WPP domain protein 1 | Chr5:17289259-17289726 REVERSE LENGTH=155 | 201606)

HSP 1 Score: 124.79 bits (312), Expect = 8.206e-37
Identity = 61/93 (65.59%), Postives = 76/93 (81.72%), Query Frame = 0
Query:   34 FSIWPPTQRTRDAVITRLIETLTTPSVLSKRYGTLPSDEAASAARQIEDEAYSVASDSGAPDGGDGIEILQVYSKEISKRMLETVKARPTIGS 126
              IWPPTQ+TRDAVI RLIETL+T S+LSKR+G+L S+EA+S A+ IEDEAY++AS +   D  DGIEIL+ YSKEISKRMLE+VKA+  + S
Sbjct:   42 LRIWPPTQKTRDAVINRLIETLSTESILSKRFGSLESEEASSVAKSIEDEAYAIASATVFGD-DDGIEILKAYSKEISKRMLESVKAKSNVAS 133          
BLAST of Vfaba.Hedin2.R1.2g168360.1 vs. Araport11
Match: AT5G27940.1 (| WPP domain protein 3 | Chr5:9974467-9974940 FORWARD LENGTH=157 | 201606)

HSP 1 Score: 87.4261 bits (215), Expect = 3.371e-22
Identity = 40/88 (45.45%), Postives = 64/88 (72.73%), Query Frame = 0
Query:   34 FSIWPPTQRTRDAVITRLIETLTTPSVLSKRYGTLPSDEAASAARQIEDEAYSVASDSGAPDGGDGIEILQVYSKEISKRMLETVKAR 121
            FS+WPP Q++RD V+  +I+TL+T S+LS +YGT+  +EA++ A+ IE++AY +AS   +    DGI+ L+VY  E S+RM+E+ + R
Sbjct:   51 FSVWPPCQKSRDYVVNSMIKTLSTDSILSYKYGTIKPEEASAVAKSIEEKAYDIASRFVS---SDGIKNLEVYGIETSERMIESAEVR 135          
BLAST of Vfaba.Hedin2.R1.2g168360.1 vs. Araport11
Match: AT3G63130.2 (| RAN GTPase activating protein 1 | Chr3:23325108-23326715 FORWARD LENGTH=535 | 201606)

HSP 1 Score: 77.411 bits (189), Expect = 6.898e-17
Identity = 37/89 (41.57%), Postives = 58/89 (65.17%), Query Frame = 0
Query:   36 IWPPTQRTRDAVITRLIETLTTPSVLSKRYGTLPSDEAASAARQIEDEAYSVASDS--GAPDGGDGIEILQVYSKEISKRMLETVKARP 122
            +WPP++ TR  ++ R+ + +TTPS+ S++YG L  +EA   A++IED A++ A+      PD GDG   + VY+KE SK ML+ +K  P
Sbjct:   17 MWPPSKSTRLMLVERMTKNITTPSIFSRKYGLLSVEEAEQDAKRIEDLAFATANKHFQNEPD-GDGTSAVHVYAKESSKLMLDVIKRGP 104          
BLAST of Vfaba.Hedin2.R1.2g168360.1 vs. Araport11
Match: AT3G63130.1 (| RAN GTPase activating protein 1 | Chr3:23325108-23326715 FORWARD LENGTH=535 | 201606)

HSP 1 Score: 77.411 bits (189), Expect = 6.898e-17
Identity = 37/89 (41.57%), Postives = 58/89 (65.17%), Query Frame = 0
Query:   36 IWPPTQRTRDAVITRLIETLTTPSVLSKRYGTLPSDEAASAARQIEDEAYSVASDS--GAPDGGDGIEILQVYSKEISKRMLETVKARP 122
            +WPP++ TR  ++ R+ + +TTPS+ S++YG L  +EA   A++IED A++ A+      PD GDG   + VY+KE SK ML+ +K  P
Sbjct:   17 MWPPSKSTRLMLVERMTKNITTPSIFSRKYGLLSVEEAEQDAKRIEDLAFATANKHFQNEPD-GDGTSAVHVYAKESSKLMLDVIKRGP 104          
BLAST of Vfaba.Hedin2.R1.2g168360.1 vs. Araport11
Match: AT5G19320.2 (| RAN GTPase activating protein 2 | Chr5:6505310-6506947 REVERSE LENGTH=545 | 201606)

HSP 1 Score: 72.0182 bits (175), Expect = 5.284e-15
Identity = 38/94 (40.43%), Postives = 59/94 (62.77%), Query Frame = 0
Query:   34 FSI--WPPTQRTRDAVITRLIETLTTPSVLSKRYGTLPSDEAASAARQIEDEAYSVASDSG--APDGGDGIEILQVYSKEISKRMLETVKARPT 123
            FSI  WPP+  TR A+I R+    ++ ++ +++YG+L  D+A   A++IED A+S A+      PD GDG   +Q+Y+KE SK +LE +K  P 
Sbjct:   12 FSIKLWPPSLPTRKALIERITNNFSSKTIFTEKYGSLTKDQATENAKRIEDIAFSTANQQFEREPD-GDGGSAVQLYAKECSKLILEVLKKGPV 104          
BLAST of Vfaba.Hedin2.R1.2g168360.1 vs. Araport11
Match: AT5G19320.1 (| RAN GTPase activating protein 2 | Chr5:6505310-6506947 REVERSE LENGTH=545 | 201606)

HSP 1 Score: 72.0182 bits (175), Expect = 5.284e-15
Identity = 38/94 (40.43%), Postives = 59/94 (62.77%), Query Frame = 0
Query:   34 FSI--WPPTQRTRDAVITRLIETLTTPSVLSKRYGTLPSDEAASAARQIEDEAYSVASDSG--APDGGDGIEILQVYSKEISKRMLETVKARPT 123
            FSI  WPP+  TR A+I R+    ++ ++ +++YG+L  D+A   A++IED A+S A+      PD GDG   +Q+Y+KE SK +LE +K  P 
Sbjct:   12 FSIKLWPPSLPTRKALIERITNNFSSKTIFTEKYGSLTKDQATENAKRIEDIAFSTANQQFEREPD-GDGGSAVQLYAKECSKLILEVLKKGPV 104          
The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.2g168360.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A2K3MSK5|A0A2K3MSK5_TRIPR9.724e-8579.27MFP1 attachment factor 1-like protein OS=Trifolium... [more]
tr|A0A1S2Y9L8|A0A1S2Y9L8_CICAR2.428e-7879.88MFP1 attachment factor 1 OS=Cicer arietinum OX=382... [more]
tr|A0A072V335|A0A072V335_MEDTR2.477e-7875.61MFP1 attachment factor-like protein OS=Medicago tr... [more]
tr|A0A392SG76|A0A392SG76_9FABA6.178e-5281.90MFP1 attachment factor 1-like (Fragment) OS=Trifol... [more]
tr|A0A4P1QWH8|A0A4P1QWH8_LUPAN1.564e-5066.67WPP domain-containing protein OS=Lupinus angustifo... [more]
tr|A0A2Z6NJA8|A0A2Z6NJA8_TRISU1.350e-4881.19WPP domain-containing protein OS=Trifolium subterr... [more]
tr|A0A1S3U2D8|A0A1S3U2D8_VIGRR2.262e-4761.18MFP1 attachment factor 1 OS=Vigna radiata var. rad... [more]
tr|A0A1J7IP67|A0A1J7IP67_LUPAN2.584e-4659.21WPP domain-containing protein OS=Lupinus angustifo... [more]
tr|A0A6A5MAK3|A0A6A5MAK3_LUPAL3.042e-4666.41WPP domain-containing protein OS=Lupinus albus OX=... [more]
tr|A0A151TTY3|A0A151TTY3_CAJCA7.414e-4658.58MFP1 attachment factor 1 OS=Cajanus cajan OX=3821 ... [more]
back to top
BLAST of Vfaba.Hedin2.R1.2g168360.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot)
Total hits: 6
Match NameE-valueIdentityDescription
sp|Q9M7N6|MAF1_SOLLC1.370e-4170.83MFP1 attachment factor 1 OS=Solanum lycopersicum O... [more]
sp|Q9C500|WPP2_ARATH1.834e-3850.00WPP domain-containing protein 2 OS=Arabidopsis tha... [more]
sp|Q9FMH6|WPP1_ARATH8.020e-3665.59WPP domain-containing protein 1 OS=Arabidopsis tha... [more]
sp|Q0WQ91|WPP3_ARATH3.295e-2145.45WPP domain-containing protein 3 OS=Arabidopsis tha... [more]
sp|Q9LE82|RAGP1_ARATH6.742e-1641.57RAN GTPase-activating protein 1 OS=Arabidopsis tha... [more]
sp|Q9M651|RAGP2_ARATH5.164e-1440.43RAN GTPase-activating protein 2 OS=Arabidopsis tha... [more]
back to top
BLAST of Vfaba.Hedin2.R1.2g168360.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11)
Total hits: 7
Match NameE-valueIdentityDescription
AT1G47200.11.877e-3950.00| WPP domain protein 2 | Chr1:17298181-17298723 RE... [more]
AT5G43070.18.206e-3765.59| WPP domain protein 1 | Chr5:17289259-17289726 RE... [more]
AT5G27940.13.371e-2245.45| WPP domain protein 3 | Chr5:9974467-9974940 FORW... [more]
AT3G63130.26.898e-1741.57| RAN GTPase activating protein 1 | Chr3:23325108-... [more]
AT3G63130.16.898e-1741.57| RAN GTPase activating protein 1 | Chr3:23325108-... [more]
AT5G19320.25.284e-1540.43| RAN GTPase activating protein 2 | Chr5:6505310-6... [more]
AT5G19320.15.284e-1540.43| RAN GTPase activating protein 2 | Chr5:6505310-6... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038214WPP domain superfamilyGENE3D1.10.246.200WPP domaincoord: 33..130
e-value: 1.8E-40
score: 139.2
IPR025265WPP domainPFAMPF13943WPPcoord: 34..125
e-value: 5.7E-39
score: 132.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..166
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..166
IPR044692WPP domain-containing protein 1/2/3PANTHERPTHR34362WPP DOMAIN-CONTAINING PROTEIN 1-RELATEDcoord: 6..152

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Hedin2.R1.2g168360.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g168360.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g168360.1; organism=Vicia faba; type=mRNA; length=501bp
ATGTCCGACCCGGAAGTCACAACTGCAGCCACATCGGAGCAAGACTCCTC
CGCCTCACCCGAACAAAACGGCGACCAAACCAAACTCTCCTCCGCCGGCT
TCAGCATATGGCCACCCACTCAGCGCACTCGCGACGCCGTCATCACTCGC
TTGATCGAAACCCTAACCACTCCCTCCGTCCTTTCCAAGCGCTACGGCAC
ATTGCCTTCTGACGAGGCCGCATCAGCCGCCCGCCAGATCGAGGACGAAG
CCTACTCTGTCGCCAGTGACTCCGGTGCTCCAGACGGCGGCGACGGTATC
GAGATCCTCCAGGTTTACTCCAAGGAAATCAGTAAGCGGATGCTTGAAAC
CGTTAAGGCTAGACCTACCATAGGTTCCAATGCGGTTGATAACGATGCTG
CTGAAGCTCCTCCATCGGAGGATCGTCCTTCTTCTTCACCAAAGGCAGAG
GATGCTCCTGAAACCGGCAAGATCGAGACTGAGGCTGAGACTGATACCTG
A
back to top

protein sequence of Vfaba.Hedin2.R1.2g168360.1_vfh_v1

>Vfaba.Hedin2.R1.2g168360.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g168360.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g168360.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=166bp
MSDPEVTTAATSEQDSSASPEQNGDQTKLSSAGFSIWPPTQRTRDAVITR
LIETLTTPSVLSKRYGTLPSDEAASAARQIEDEAYSVASDSGAPDGGDGI
EILQVYSKEISKRMLETVKARPTIGSNAVDNDAAEAPPSEDRPSSSPKAE
DAPETGKIETEAETDT
back to top

mRNA from alignment at chr2:1053704374..1053704874-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Hedin2.R1.2g168360.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g168360.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g168360.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr2:1053704374..1053704874- (Vicia faba
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR038214WPP_sf
IPR025265WPP_dom
IPR044692WPP1/2/3
Vocabulary: Biological Process
TermDefinition
GO:0048527lateral root development
GO:0000278mitotic cell cycle