Vfaba.Hedin2.R1.3g055800.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.3g055800.1 vs. UniProtKB/TrEMBL
Match: tr|G7KZJ5|G7KZJ5_MEDTR (Photosystem I reaction center subunit IV A OS=Medicago truncatula OX=3880 GN=11430839 PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 1.524e-57 Identity = 100/145 (68.97%), Postives = 114/145 (78.62%), Query Frame = 0
Query: 1 MASSSVASAACGFVLSLN-VAANNTTSSLSSRTNMLMFPIKSNNIASSRLVVRATEDTADAATPTASSPAADTATKPKPPPIGPKRGAKVKILRQESYWYKGYGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEVEEVE 144
MAS ++ASAA GFVLS N V+ N T+ L SR NM+M+P N +SRLVVRA+E+ A ATPT AA K KPPPIGPKRGAKVK+LR+ESYW+ G GSVV VDQDPNTRYPVVVRFNKVNYANVSTNNYALDE+EEV+
Sbjct: 1 MASCNMASAASGFVLSPNNVSGNTNTNLLVSRMNMVMYPTTRN--TNSRLVVRASEEAA--ATPTVEGEAAP---KTKPPPIGPKRGAKVKVLRKESYWFNGIGSVVAVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIEEVK 138
BLAST of Vfaba.Hedin2.R1.3g055800.1 vs. UniProtKB/TrEMBL
Match: tr|B7FHF6|B7FHF6_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 1.796e-57 Identity = 100/145 (68.97%), Postives = 114/145 (78.62%), Query Frame = 0
Query: 1 MASSSVASAACGFVLSLN-VAANNTTSSLSSRTNMLMFPIKSNNIASSRLVVRATEDTADAATPTASSPAADTATKPKPPPIGPKRGAKVKILRQESYWYKGYGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEVEEVE 144
MAS ++ASAA GFVLS N V+ N T+ L SR NM+M+P N +SRLVVRA+E+ A ATPT AA K KPPPIGPKRGAKVK+LR+ESYW+ G GSVV VDQDPNTRYPVVVRFNKVNYANVSTNNYALDE+EEV+
Sbjct: 1 MASCNMASAASGFVLSPNNVSCNTNTNLLVSRMNMVMYPTTRN--TNSRLVVRASEEAA--ATPTVEGEAAP---KTKPPPIGPKRGAKVKVLRKESYWFNGIGSVVAVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIEEVK 138
BLAST of Vfaba.Hedin2.R1.3g055800.1 vs. UniProtKB/TrEMBL
Match: tr|A0A392MJN7|A0A392MJN7_9FABA (Photosystem I reaction center subunit IV A chloroplastic-like OS=Trifolium medium OX=97028 GN=A2U01_0008444 PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 5.566e-53 Identity = 111/145 (76.55%), Postives = 123/145 (84.83%), Query Frame = 0
Query: 1 MASSSVASAACGFVLSLNVAANNTTSSLSSRTN-MLMFPIKSNNIASS-RLVVRATEDTADAATPTASSPAADTATKPKPPPIGPKRGAKVKILRQESYWYKGYGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEVEEV 143
MA+SS+ASAACGF+LSLNVA T+S+ +S + MLMFPIKSNNI SS RLVVRA+ED A +A + PA D A KPKPPPIGPKRGAKVKILR+ESYWYKG GSVV VDQDP TRYPVVVRFNKVNYANVSTNNYALDE+EEV
Sbjct: 1 MATSSMASAACGFMLSLNVAGTTTSSAATSSRSTMLMFPIKSNNIGSSSRLVVRASEDPAASAPAATAPPAGDAAPKPKPPPIGPKRGAKVKILRKESYWYKGTGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEV 145
BLAST of Vfaba.Hedin2.R1.3g055800.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6P415|A0A2Z6P415_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_396090 PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 7.953e-53 Identity = 115/147 (78.23%), Postives = 125/147 (85.03%), Query Frame = 0
Query: 1 MASSSVASAACGFVLSLNVAANNTTSSLSSRTNMLMFPIKSNNIASS---RLVVRATEDTADAATPTASSPA-ADTATKPKPPPIGPKRGAKVKILRQESYWYKGYGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEVEEV 143
MA+SS+ASAACGF+LSLNVAA T+SS SSR+ MLMFPIKSNNI SS RLVVRA+E+ A AA TA P D A KPKPPPIGPKRGAKVKILR+ESYWYKG G+VV VDQDP TRYPVVVRFNKVNYANVSTNNYALDE+EEV
Sbjct: 1 MATSSMASAACGFMLSLNVAATTTSSSSSSRSTMLMFPIKSNNIGSSSSSRLVVRASEEPAAAAPATAPPPPTGDAAPKPKPPPIGPKRGAKVKILRKESYWYKGTGAVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEV 147
BLAST of Vfaba.Hedin2.R1.3g055800.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XVA9|A0A1S2XVA9_CICAR (photosystem I reaction center subunit IV A, chloroplastic-like OS=Cicer arietinum OX=3827 GN=LOC101507899 PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.664e-51 Identity = 100/132 (75.76%), Postives = 107/132 (81.06%), Query Frame = 0
Query: 12 GFVLSLNVAANNTTSSLSSRTNMLMFPIKSNNIASSRLVVRATEDTADAATPTASSPAADTATKPKPPPIGPKRGAKVKILRQESYWYKGYGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEVEEV 143
GFVLSLNV A+NT SS SR+ MLMFPIKSN IA+SRLVVRA+ A A+ A KPKPPPIGPKRGAKVKILR+ESYWYKG GSVV VDQDP TRYPVVVRFNKVNYANVSTNNYALDE+EEV
Sbjct: 12 GFVLSLNVVASNTNSSALSRSTMLMFPIKSNTIATSRLVVRAS--DDAAPATATPPADAEVAAKPKPPPIGPKRGAKVKILRKESYWYKGTGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEV 141
BLAST of Vfaba.Hedin2.R1.3g055800.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3L907|A0A2K3L907_TRIPR (Photosystem I reaction center subunit IV chloroplastic-like OS=Trifolium pratense OX=57577 GN=L195_g030949 PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 9.606e-50 Identity = 93/146 (63.70%), Postives = 111/146 (76.03%), Query Frame = 0
Query: 1 MASSSVASAACGFVLS-LNVAANNTTSSLSSRTNMLMFPIKSNNIASSRLVVRATEDTADAATPTASSPA-ADTATKPKPPPIGPKRGAKVKILRQESYWYKGYGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEVEEVE 144
MAS ++A AA FVLS NV+ N T+SL+SR NM+M+P N +SRLV+RA E+ T TA+ P + A KPKPP IGPKRGAKVKILR+ESYW+ GSVV VDQDP TRYPVVVRFNKVNYANVSTNNYAL+E+EE++
Sbjct: 1 MASCNMALAASRFVLSPNNVSTNTNTNSLASRINMVMYPTTKN--TNSRLVLRAAEEGGATPTETATPPVEGEAAPKPKPPTIGPKRGAKVKILREESYWFNNIGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALNEIEEIK 144
BLAST of Vfaba.Hedin2.R1.3g055800.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2U1KSB4|A0A2U1KSB4_ARTAN (Electron transport accessory protein-like domain-containing protein OS=Artemisia annua OX=35608 GN=CTI12_AA561630 PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.015e-49 Identity = 92/152 (60.53%), Postives = 105/152 (69.08%), Query Frame = 0
Query: 1 MASSSVASAACGFVLSLNVAANNTTSSLSSRTNMLMFPIKSNNIASSRLVVRATEDTADAATPTASS---------PAADTATKPKPPPIGPKRGAKVKILRQESYWYKGYGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEVEEV 143
MAS S+ASAA GF++S N+ +N +T S M+MF S N SRLVVRA E A + P + A PKPPPIGPKRGAKV+ILR+ESYW+KG GSVVTVDQDP TRYPVVVRFNKVNYA VSTNNYALDE+EEV
Sbjct: 1 MASCSMASAAIGFMVSPNMTSNTSTVKCS----MVMF--SSKNKRCSRLVVRAEEQPAATPAAAEAEKPAVAEAEAPKKEAA--PKPPPIGPKRGAKVRILRKESYWFKGVGSVVTVDQDPKTRYPVVVRFNKVNYAGVSTNNYALDEIEEV 144
BLAST of Vfaba.Hedin2.R1.3g055800.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3MMK0|A0A2K3MMK0_TRIPR (Photosystem I reaction center subunit IV chloroplastic-like OS=Trifolium pratense OX=57577 GN=L195_g015171 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.285e-49 Identity = 108/147 (73.47%), Postives = 120/147 (81.63%), Query Frame = 0
Query: 1 MASSSVASAACGFVLSLNVAANNTTSSLSSRTN-MLMFPIKSNNIASS--RLVVRATEDTADAATPTASSPAADTATKPKPPPI-GPKRGAKVKILRQESYWYKGYGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEVEEV 143
MA+SS+ASAACGF+LSLNVAA T+SS +S + MLMFPIKSNNI SS RLVVRA+E+ A A TA++P A A PP GPKRGAKVKILR+ESYWYKG GSVV VDQDP TRYPVVVRFNKVNYANVSTNNYALDE+EEV
Sbjct: 1 MATSSMASAACGFMLSLNVAATTTSSSATSSRSAMLMFPIKSNNIGSSSSRLVVRASEEPAAGAPATAAAPPAGDAAPKPKPPPIGPKRGAKVKILRKESYWYKGTGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEV 147
BLAST of Vfaba.Hedin2.R1.3g055800.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2G9HJM2|A0A2G9HJM2_9LAMI (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_09607 PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 3.394e-49 Identity = 93/145 (64.14%), Postives = 108/145 (74.48%), Query Frame = 0
Query: 1 MASSSVASAACGFVLSLNVAANNTTSSLSSRTNMLMFPIKSNNIASSRLVVRATEDTADAATPTASS--PAADTATKPKPPPIGPKRGAKVKILRQESYWYKGYGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEVEEV 143
MA+ S+ASAACGF++ A N T+ + S+ M+ FP+ N+ SRLVVRA E+ A AA P SS P A+ KPPPIGP RG+KV+ILR+ESYWYKG GSVV VDQDP TRYPVVVRFNKVNYANVSTNNYALDEVE V
Sbjct: 1 MATCSMASAACGFMM----APNFTSKATDSKPTMVFFPVPKNS-RQSRLVVRAAEEAAPAAEPAPSSDSPPAEAPKAAKPPPIGPPRGSKVRILRKESYWYKGVGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEVEAV 140
BLAST of Vfaba.Hedin2.R1.3g055800.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2I4H1E0|A0A2I4H1E0_JUGRE (photosystem I reaction center subunit IV, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC109012666 PE=3 SV=2) HSP 1 Score: 165.236 bits (417), Expect = 5.569e-49 Identity = 95/143 (66.43%), Postives = 112/143 (78.32%), Query Frame = 0
Query: 1 MASSSVASAACGFVLSLNVAANNTTSSLSSRTNMLMFPIKSNNIASSRLVVRATEDTADAATPTASSPAADTATKPKPPPIGPKRGAKVKILRQESYWYKGYGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEVEEV 143
MAS ++ASAA GFVL+ NV+ +++S S+R+NML FP+K+N SSRLVVRA E+ A ++P A K KPPPIGPKRGAKVKILR+ESYW+ G GSVV VDQDP TRYPVVVRFNKVNYANVSTNNYALDE+ EV
Sbjct: 57 MASCNMASAASGFVLTPNVS---SSASSSARSNMLFFPLKNN---SSRLVVRAAEEGAAPPA---TAPVEGEAPKAKPPPIGPKRGAKVKILRKESYWFNGIGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIVEV 190
BLAST of Vfaba.Hedin2.R1.3g055800.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q41228|PSAEA_NICSY (Photosystem I reaction center subunit IV A, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=PSAEA PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.144e-49 Identity = 91/145 (62.76%), Postives = 105/145 (72.41%), Query Frame = 0
Query: 1 MASSSVASAACGFVLSL-NVAANNTTSSLSSRTNMLMFPIKSNNIASSRLVVRATEDTADAATPTASSPAADTATKPKPPPIGPKRGAKVKILRQESYWYKGYGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEVEEVE 144
MAS ++ASAA F+++ NVA+N TS RT ML F K+ + RLVVRA E+ A A + PA KPPPIGPKRG KV+ILR+ESYWYKG GSVV DQDPNTRYPVVVRFNKVNYANVSTNNYALDE+EEV+
Sbjct: 1 MASCNMASAASNFLVATPNVASNTNTS----RTTMLFFSSKNYGSTAPRLVVRAAEEAAPPAAAATAEPAEAPVKAAKPPPIGPKRGTKVRILRKESYWYKGTGSVVACDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIEEVK 141
BLAST of Vfaba.Hedin2.R1.3g055800.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9S714|PSAE2_ARATH (Photosystem I reaction center subunit IV B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAE2 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 4.506e-42 Identity = 89/147 (60.54%), Postives = 104/147 (70.75%), Query Frame = 0
Query: 5 SVASAACGFVLSLNVAANNTTSSLSSRTNMLMFPIKSNNIASSRLVVRATEDT-------ADAATPTASSPAADTATKPKPPPIGPKRGAKVKILRQESYWYKGYGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEVEEVE 144
++ SAA GF+L+ NV A S S T + P++S SRLVVRA EDT ++T A++PA A K KPPPIGPKRG+KVKILR+ESYWYK GSVV VDQDP TRYPVVVRF KVNYAN+STNNYALDEVEEV+
Sbjct: 2 AMTSAATGFILTANVPAAIGGGSSKSTTIVSFLPMRS---FGSRLVVRAAEDTPPATASSDSSSTTAAAAPAKVPAAKAKPPPIGPKRGSKVKILRKESYWYKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEVK 145
BLAST of Vfaba.Hedin2.R1.3g055800.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q41229|PSAEB_NICSY (Photosystem I reaction center subunit IV B, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=PSAEB PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 4.436e-41 Identity = 85/136 (62.50%), Postives = 100/136 (73.53%), Query Frame = 0
Query: 12 GFVLSL-NVAANNTTSSLSSRTNMLMFPIKSNNIASS--RLVVRATEDTADAATPTASSPAADTATKPKPPPIGPKRGAKVKILRQESYWYKGYGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEVEEVE 144
GF+++ N+A +NT + RT+ML F NN ++ RLVVRA E+ A A + A A KPPPIGPKRG KV++LR+ESYWYKG GSVV VDQDPNTRYPVVVRFNKVNYANVSTNNYALDEVEEV+
Sbjct: 12 GFMVATPNIATSNT----APRTSMLFFSSSKNNTTTNFPRLVVRAAEEAAPPAATATAEGEAPPAKAAKPPPIGPKRGTKVRVLRKESYWYKGVGSVVAVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEVEEVK 143
BLAST of Vfaba.Hedin2.R1.3g055800.1 vs. UniProtKB/Swiss-Prot
Match: sp|P13194|PSAE_HORVU (Photosystem I reaction center subunit IV, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSAE PE=1 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 3.607e-40 Identity = 85/151 (56.29%), Postives = 99/151 (65.56%), Query Frame = 0
Query: 1 MASSSVASAACGFVLSLNVAANNTTSSLSSRTNMLMFPIKSNNIASSRLVVRATEDTADAATPTAS----SPAADTATKP----KPPPIGPKRGAKVKILRQESYWYKGYGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEVEEV 143
MAS+++ASA F+L+ + + +SSR + L +N +LV RA E TA A A P A ATK KPPP GPKRG KVKILR+ESYWY G GSVVTVDQDPNTRYPVVVRF KVNYA VSTNNYALDE++EV
Sbjct: 1 MASTNMASATSRFMLAAGIPSG-ANGGVSSRVSFL-----PSNRLGLKLVARAEEPTAAAPAEPAPAADEKPEAAVATKEPAKAKPPPRGPKRGTKVKILRRESYWYNGTGSVVTVDQDPNTRYPVVVRFAKVNYAGVSTNNYALDEIKEV 145
BLAST of Vfaba.Hedin2.R1.3g055800.1 vs. UniProtKB/Swiss-Prot
Match: sp|P12354|PSAE_SPIOL (Photosystem I reaction center subunit IV, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSAE-1 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.049e-35 Identity = 54/63 (85.71%), Postives = 60/63 (95.24%), Query Frame = 0
Query: 81 IGPKRGAKVKILRQESYWYKGYGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEVEEV 143
IGPKRG+KV+I+R+ESYWYKG GSVV VDQDP TRYPVVVRFNKVNYANVSTNNYALDE++EV
Sbjct: 62 IGPKRGSKVRIMRKESYWYKGVGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIQEV 124
BLAST of Vfaba.Hedin2.R1.3g055800.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9S831|PSAE1_ARATH (Photosystem I reaction center subunit IV A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAE1 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.618e-31 Identity = 86/145 (59.31%), Postives = 104/145 (71.72%), Query Frame = 0
Query: 5 SVASAACGFVLSLNVAANNTTSSLSSRTNMLMFPIKSNNIASSRLVVRATED------TADAATPTASSPAADTATKPKPPPIGPKRGAKVKILRQESYWYKGYGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEVEEV 143
++ +A+ FVL NV + SS S + L P+++ A SRLVVRA ED ++ + A++P TATKPKPPPIGPKRG+KVKILR+ESYW+K GSVV VDQDP TRYPVVVRF KVNYAN+STNNYALDEVEEV
Sbjct: 2 AMTTASTVFVLPANVTSVAGASSSRSSVSFL--PMRN---AGSRLVVRAAEDPAPASSSSKDSPAAAAAPDGATATKPKPPPIGPKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEV 141
BLAST of Vfaba.Hedin2.R1.3g055800.1 vs. UniProtKB/Swiss-Prot
Match: sp|P12352|PSAE_CHLRE (Photosystem I reaction center subunit IV, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=PSAE PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 7.174e-24 Identity = 56/115 (48.70%), Postives = 67/115 (58.26%), Query Frame = 0
Query: 26 SSLSSRTNMLMFPIKSNNIASSRLVVRATEDTADAATPTASSPAADTATKPKPPPIGPKRGAKVKILRQESYWYKGYGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEV 140
+LSSR N+ P ++ RLVVRA E A +P + +GPKRG+ VKILR ESYW+ G VV+VDQ RYPVVVRF NYA V+TNNYALDEV
Sbjct: 2 QALSSRVNIAAKPQRAQ-----RLVVRAEEVKA--------APKKE---------VGPKRGSLVKILRPESYWFNQVGKVVSVDQS-GVRYPVVVRFENQNYAGVTTNNYALDEV 93
BLAST of Vfaba.Hedin2.R1.3g055800.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q7NFW6|PSAE_GLOVI (Photosystem I reaction center subunit IV OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX=251221 GN=psaE PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 3.433e-21 Identity = 36/61 (59.02%), Postives = 49/61 (80.33%), Query Frame = 0
Query: 84 KRGAKVKILRQESYWYKGYGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEVEEVE 144
+RGAKV+ILR+ESYWY+ G+V +VD+ T YPV VRF KVNY+ ++TNN+ + E+EEVE
Sbjct: 4 ERGAKVRILRKESYWYREVGTVASVDKSEKTIYPVTVRFEKVNYSGINTNNFGVSELEEVE 64
BLAST of Vfaba.Hedin2.R1.3g055800.1 vs. UniProtKB/Swiss-Prot
Match: sp|P0A423|PSAE_THEEB (Photosystem I reaction center subunit IV OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=psaE PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 2.815e-20 Identity = 39/67 (58.21%), Postives = 50/67 (74.63%), Query Frame = 0
Query: 84 KRGAKVKILRQESYWYKGYGSVVTVDQDPNTRYPVVVRFNKVNY-------ANVSTNNYALDEVEEV 143
+RG+KVKILR ESYWY G+V +VDQ P +YPV+VRF+KVNY + V+TNN+AL EV+EV
Sbjct: 3 QRGSKVKILRPESYWYNEVGTVASVDQTPGVKYPVIVRFDKVNYTGYSGSASGVNTNNFALHEVQEV 69
BLAST of Vfaba.Hedin2.R1.3g055800.1 vs. UniProtKB/Swiss-Prot
Match: sp|P0A424|PSAE_SYNEL (Photosystem I reaction center subunit IV OS=Synechococcus elongatus OX=32046 GN=psaE PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 2.815e-20 Identity = 39/67 (58.21%), Postives = 50/67 (74.63%), Query Frame = 0
Query: 84 KRGAKVKILRQESYWYKGYGSVVTVDQDPNTRYPVVVRFNKVNY-------ANVSTNNYALDEVEEV 143
+RG+KVKILR ESYWY G+V +VDQ P +YPV+VRF+KVNY + V+TNN+AL EV+EV
Sbjct: 3 QRGSKVKILRPESYWYNEVGTVASVDQTPGVKYPVIVRFDKVNYTGYSGSASGVNTNNFALHEVQEV 69
BLAST of Vfaba.Hedin2.R1.3g055800.1 vs. Araport11
Match: AT2G20260.1 (| photosystem I subunit E-2 | Chr2:8736780-8737644 FORWARD LENGTH=145 | 201606) HSP 1 Score: 139.428 bits (350), Expect = 4.610e-43 Identity = 89/147 (60.54%), Postives = 104/147 (70.75%), Query Frame = 0
Query: 5 SVASAACGFVLSLNVAANNTTSSLSSRTNMLMFPIKSNNIASSRLVVRATEDT-------ADAATPTASSPAADTATKPKPPPIGPKRGAKVKILRQESYWYKGYGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEVEEVE 144
++ SAA GF+L+ NV A S S T + P++S SRLVVRA EDT ++T A++PA A K KPPPIGPKRG+KVKILR+ESYWYK GSVV VDQDP TRYPVVVRF KVNYAN+STNNYALDEVEEV+
Sbjct: 2 AMTSAATGFILTANVPAAIGGGSSKSTTIVSFLPMRS---FGSRLVVRAAEDTPPATASSDSSSTTAAAAPAKVPAAKAKPPPIGPKRGSKVKILRKESYWYKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEVK 145
BLAST of Vfaba.Hedin2.R1.3g055800.1 vs. Araport11
Match: AT4G28750.1 (| Photosystem I reaction centre subunit IV / PsaE protein | Chr4:14202951-14203888 REVERSE LENGTH=143 | 201606) HSP 1 Score: 112.849 bits (281), Expect = 1.655e-32 Identity = 86/145 (59.31%), Postives = 104/145 (71.72%), Query Frame = 0
Query: 5 SVASAACGFVLSLNVAANNTTSSLSSRTNMLMFPIKSNNIASSRLVVRATED------TADAATPTASSPAADTATKPKPPPIGPKRGAKVKILRQESYWYKGYGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEVEEV 143
++ +A+ FVL NV + SS S + L P+++ A SRLVVRA ED ++ + A++P TATKPKPPPIGPKRG+KVKILR+ESYW+K GSVV VDQDP TRYPVVVRF KVNYAN+STNNYALDEVEEV
Sbjct: 2 AMTTASTVFVLPANVTSVAGASSSRSSVSFL--PMRN---AGSRLVVRAAEDPAPASSSSKDSPAAAAAPDGATATKPKPPPIGPKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEV 141 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.3g055800.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Hedin2.R1.3g055800.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 10
BLAST of Vfaba.Hedin2.R1.3g055800.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 2
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.3g055800.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g055800.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g055800.1; organism=Vicia faba; type=mRNA; length=435bpback to top protein sequence of Vfaba.Hedin2.R1.3g055800.1_vfh_v1 >Vfaba.Hedin2.R1.3g055800.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g055800.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g055800.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=144bpback to top mRNA from alignment at chr3:348985320..348985997+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.3g055800.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g055800.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g055800.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr3:348985320..348985997+ (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
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