Vfaba.Hedin2.R1.3g061480.1

Transcript Overview
NameVfaba.Hedin2.R1.3g061480.1
Unique NameVfaba.Hedin2.R1.3g061480.1_vfh_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length753
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr3chromosomechr3:381499238..381500156 -Vicia faba inbred line Hedin/2 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vfhzwsR276Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vfhzwsR303Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
asvfhL410Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cavfhL208Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL286Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL307Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvfhL0451Cajanus cajan Asha genome v1.0Cajanus cajan
ccvfhL0706Cajanus cajan Asha genome v1.0Cajanus cajan
pvvfhL042Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvfhL342Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL634Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvfhL204Pisum sativum Cameor genome v1aPisum sativum
psvfhL558Pisum sativum Cameor genome v1aPisum sativum
psvfhL593Pisum sativum Cameor genome v1aPisum sativum
vfhvfhR184Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvfhL220Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuR329Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR369Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvfhL346Vicia faba cv. Tiffany genome v1.0Vicia faba
caivfhL247Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivfhL345Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvfhL0662Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0693Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0694Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0834Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0890Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL1149Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL1228Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
vfhvrvR357Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR400Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR450Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvuaR296Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvuaR328Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvuaR348Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR372Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvssR401Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvssR417Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvfhL177Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL239Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvfhL389Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL413Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL498Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvfhL175Cicer arietinum
carvfhL242Cicer arietinum
ccavfhL211Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL339Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vfhvumR394Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR418Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR504Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvvaR456Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvfhL431Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL699Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL724Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vfhvstR441Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR470Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR479Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvfvfhL042Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL609Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vfhvunR306Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR342Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vigan.08G161100.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Va02G053650.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Ca_03763Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.3g061480Vfaba.Hedin2.R1.3g061480_vfh_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.3g061480.1_vfh_v1-exonVfaba.Hedin2.R1.3g061480.1_vfh_v1-exon-chr3_vfh_v1:381499238..381499552Vicia fabaexon
Vfaba.Hedin2.R1.3g061480.1_vfh_v1-exonVfaba.Hedin2.R1.3g061480.1_vfh_v1-exon-chr3_vfh_v1:381499616..381499855Vicia fabaexon
Vfaba.Hedin2.R1.3g061480.1_vfh_v1-exonVfaba.Hedin2.R1.3g061480.1_vfh_v1-exon-chr3_vfh_v1:381499959..381500156Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.3g061480.1_vfh_v1-cdsVfaba.Hedin2.R1.3g061480.1_vfh_v1-cds-chr3_vfh_v1:381499238..381499552Vicia fabaCDS
Vfaba.Hedin2.R1.3g061480.1_vfh_v1-cdsVfaba.Hedin2.R1.3g061480.1_vfh_v1-cds-chr3_vfh_v1:381499616..381499855Vicia fabaCDS
Vfaba.Hedin2.R1.3g061480.1_vfh_v1-cdsVfaba.Hedin2.R1.3g061480.1_vfh_v1-cds-chr3_vfh_v1:381499959..381500156Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.3g061480.1_vfh_v1Vfaba.Hedin2.R1.3g061480.1_vfh_v1Vicia fabapolypeptide
Vfaba.Hedin2.R1.3g061480.1_vfh_v1Vfaba.Hedin2.R1.3g061480.1_vfh_v1-proteinVicia fabapolypeptide


Homology
BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0A8KXA9|A0A0A8KXA9_9FABA (His5 protein OS=Vavilovia formosa OX=512756 GN=his5 PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 3.709e-63
Identity = 183/263 (69.58%), Postives = 201/263 (76.43%), Query Frame = 0
Query:    1 MATEEPIVAVESVPEPIVTEPTVTEPEVPEKDEPTGEVEKTKKTKESKPKKASKPRNPASHPSYEEMIKDAIVSLKEKSGSSQYAIAKFIEEKHKQLPANFKKLLLQNLKKKVASGKLVKVKGSFKLSSAAKKPAV--------AKPKTKPAAKVASKAKAVAAKPKKAVAKPKTVASKAKPTAAKTKVAAKAKPVVKPKSKGKPAKVAKTSAKTTPGKKVAAA----KKVEVAKKVPVKSVKAKSVKTPVKKVS-VKRGGKK 250
            MATEEPI+AVE V EP   EP V+E    + +EP  E +KTKK+KESKPKKASKPRNPASHP+YEEMIKDAIVSLKEK+GSSQYAIAKFIEEKHKQLPANFKKLLLQNLKKKVASGKL+KVKGSFKLS+AAKKP V        AK K    AK A+K KA A    K  +K K+V +K K  AAK KV AK K  VKPK K K AKVAKTS KTTPGKK+A A    KKV V KK PVKSVKAKSVK+P KK + VKRGG+K
Sbjct:    1 MATEEPIIAVEPVLEPATAEPPVSE----KVEEPKAETQKTKKSKESKPKKASKPRNPASHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKHKQLPANFKKLLLQNLKKKVASGKLLKVKGSFKLSAAAKKPVVAKPKTKPAAKAKAAVKAKTAAKPKAKAVVKPKVASKSKSVTTKPKTAAAKPKVVAKTKAAVKPKPKAKSAKVAKTSTKTTPGKKIAVAKTAPKKVAVTKKAPVKSVKAKSVKSPAKKATGVKRGGRK 259          
BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3LH43|A0A2K3LH43_TRIPR (Histone H1 (Fragment) OS=Trifolium pratense OX=57577 GN=histone H1 PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 2.733e-59
Identity = 174/265 (65.66%), Postives = 190/265 (71.70%), Query Frame = 0
Query:    1 MATEEPIVAVESVPEPIVTEPTVTEPEVPEKDEPTGEVEKTKKTKESKPKKASKPRNPASHPSYEEMIKDAIVSLKEKSGSSQYAIAKFIEEKHK-QLPANFKKLLLQNLKKKVASGKLVKVKGSFKL--------------SSAAKKPAVAKPKTKPAAKVASKAKAVAAKPKKAVAKPKTVASKAKPTAAKTKVAAKAKPV-------VKPKSKGKPAKVAKTSAKTTPGKKVAAAKKVEVAKKVPVKSVKAKSVKTPVKKVS 243
            MATEEPIVAVE VPEP +TEP       P  ++   +VE  KKTKESKPKKASKPR+PASHP+YEEMIKDAIVSLKE++GSSQYAIAKFIEEKHK QLP+NFKKLLLQNLKK VASGKLVKVKGSFKL              S A KKPA +KPKTKP+A   SKAK V  KP KA +KPKT A K K T AK K AA    V       VK K K K AKVA+TS +T+PGKKV   KKV  AKK PVKSVK K VK+P KKVS
Sbjct:    1 MATEEPIVAVEPVPEPTITEP-------PASEKEEAKVEAEKKTKESKPKKASKPRSPASHPTYEEMIKDAIVSLKERTGSSQYAIAKFIEEKHKQQLPSNFKKLLLQNLKKNVASGKLVKVKGSFKLPSKTTKPSSSVTTASQANKKPAASKPKTKPSAS-KSKAKTV-VKP-KAASKPKTAAVKTKTTVAKPKPAAAKSKVAAKPKAGVKAKPKDKSAKVARTSTRTSPGKKV--PKKVVAAKKAPVKSVKPKIVKSPAKKVS 253          
BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3KDQ2|A0A2K3KDQ2_TRIPR (Histone H1 (Fragment) OS=Trifolium pratense OX=57577 GN=histone H1 PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 4.794e-56
Identity = 151/221 (68.33%), Postives = 165/221 (74.66%), Query Frame = 0
Query:   52 ASKPRNPASHPSYEEMIKDAIVSLKEKSGSSQYAIAKFIEEKHK-QLPANFKKLLLQNLKKKVASGKLVKVKGSFKL--------------SSAAKKPAVAKPKTKPAAKVASKAKAVAAKPKKAVAKPKTVASKAKPTAAK-------TKVAAKAKPVVKPKSKGKPAKVAKTSAKTTPGKKVAAAKKVEVAKKVPVKSVKAKSVKTPVKKVSVKRGGKK 250
            ASKPR+PASHP+YEEMIKDAIVSLKE++GSSQYAIAKFIEEKHK QLP+NFKKLLLQNLKK VASGKLVKVKGSFKL              S A KKPA +KPKTKP+A   SKAK V  KP KA +KPKT A K K T AK       +KVAAK K  VK K K K AKVA+TS +T+PGKKV   KKV  AKK PVKSVK K VK+P KKVSVKRGG+K
Sbjct:   16 ASKPRSPASHPTYEEMIKDAIVSLKERTGSSQYAIAKFIEEKHKQQLPSNFKKLLLQNLKKNVASGKLVKVKGSFKLPSKTTKPSSSVTTASQANKKPAASKPKTKPSAS-KSKAKTV-VKP-KAASKPKTAAVKTKTTVAKPKPAAAKSKVAAKPKAGVKAKPKDKSAKVARTSTRTSPGKKV--PKKVVAAKKAPVKSVKPKIVKSPAKKVSVKRGGRK 231          
BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3LZD3|A0A2K3LZD3_TRIPR (Histone H1 (Fragment) OS=Trifolium pratense OX=57577 GN=histone H1 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.744e-55
Identity = 150/221 (67.87%), Postives = 164/221 (74.21%), Query Frame = 0
Query:   52 ASKPRNPASHPSYEEMIKDAIVSLKEKSGSSQYAIAKFIEEKHK-QLPANFKKLLLQNLKKKVASGKLVKVKGSFKL--------------SSAAKKPAVAKPKTKPAAKVASKAKAVAAKPKKAVAKPKTVASKAKPTAAK-------TKVAAKAKPVVKPKSKGKPAKVAKTSAKTTPGKKVAAAKKVEVAKKVPVKSVKAKSVKTPVKKVSVKRGGKK 250
            ASKPR+PASHP+YEEMIKDAIVSLKE++GSSQYAIAKFIEEKHK QLP+NFKKLLLQNLKK VASGKLVKVKGSFKL              S A KKPA +KPKTKP+A   SKAK V  KP KA +KPKT A K K T AK       +KVAAK K  VK K K K AKVA+TS +T+PGKKV   KKV  AKK PVKSVK K VK+P KKVS KRGG+K
Sbjct:   16 ASKPRSPASHPTYEEMIKDAIVSLKERTGSSQYAIAKFIEEKHKQQLPSNFKKLLLQNLKKNVASGKLVKVKGSFKLPSKTTKPSSSVTTASQANKKPAASKPKTKPSAS-KSKAKTV-VKP-KAASKPKTAAVKTKTTVAKPKPAAAKSKVAAKPKAGVKAKPKDKSAKVARTSTRTSPGKKV--PKKVVAAKKAPVKSVKPKIVKSPAKKVSTKRGGRK 231          
BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. UniProtKB/TrEMBL
Match: tr|G8YZP6|G8YZP6_PEA (Histone H1 subtype 3 OS=Pisum sativum subsp. sativum OX=208194 GN=his3 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 5.396e-55
Identity = 182/268 (67.91%), Postives = 194/268 (72.39%), Query Frame = 0
Query:    1 MATEEPIVAVESVPEPIVTEPTVTEPEVPEKDEPTGEVEKTKKTKESKPKKASKPRNPASHPSYEEMIKDAIVSLKEKSGSSQYAIAKFIEEKHKQLPANFKKLLLQNLKKKVASGKLVKVKGSFKLSSAAKKPAVAKPKTKPAAKVASKAKAVAAKPKKAVAKPKTVASKAKPTAA-------------KTKVAAKAKPVVKPKSKGKPAKVAKTSAKTTPGKKVAAA----KKVEVAKKVPVKSVKAKSVKTPVKKVS-VKRGGKK 250
            MATEEPI+AVE V EP   EP V E    E DEP  E EKTKK KE+KPKKASKPRNPASHP+YEEMIKDAIVSLKEK+GSSQYAIAKFIEEK KQLP NFK+LLLQNLKK VASGKL KVK SFKLS+AAKKPAVAKPK+KPAAKV S     AAKPK         ASKAK                 K K+ AK K  VKPK K KPAKVAKTS KTTPGKKVA      KKV  AKK PVKSVK K+VK+P KK S +KRGG+K
Sbjct:    1 MATEEPIIAVEPVSEPATAEPPVLE----EVDEPKAEAEKTKKVKETKPKKASKPRNPASHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPGNFKRLLLQNLKKNVASGKLTKVKASFKLSAAAKKPAVAKPKSKPAAKVKSVKAKTAAKPKAKAVVKPKAASKAKSVTTKPKAAAAKPKAAAKPKIVAKPKAAVKPKPKAKPAKVAKTSTKTTPGKKVAVGKSAPKKVAAAKKAPVKSVKPKTVKSPAKKASGLKRGGRK 264          
BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. UniProtKB/TrEMBL
Match: tr|I3S6T7|I3S6T7_MEDTR (H15 domain-containing protein OS=Medicago truncatula OX=3880 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.294e-53
Identity = 162/262 (61.83%), Postives = 182/262 (69.47%), Query Frame = 0
Query:    1 MATEEPIVAVESVPEPIVTEPTVTEPEVPEKD--EPTGEVEKTKKTK----ESKPKKASKPRNPASHPSYEEMIKDAIVSLKEKSGSSQYAIAKFIEEKHKQLPANFKKLLLQNLKKKVASGKLVKVKGSFKLSSAAK----KPAVAKPKTKPAAKVASKAKAVAAKPKKAVAKPKTVASKAKPTAAKTKVAAKAKPVVKPKSKGKPAKVAKTSAKTTPGKKVAAAKKVEVAKKVPVKSV--KAKSVKTPVKKVSVKRGGKK 250
            MATEEPIVAVE VPEP +      EP   EKD  EP       KKTK    ESKPKK SKPRNPASHP+YEEMIKDAIVSLKE++GSSQYAIAKFIEEKHKQLP+NFKKLLLQNLKK VASGKLVKVKGSFKLSSA +      A    K K  A V  + K+V AKPK A AKPK+ A+K K    K K AAK KP          AKVAKT+ +T+PGKKVA AK     K   VK+V  K K+V++P KKV++KRGG+K
Sbjct:    1 MATEEPIVAVEPVPEPTI----AAEPPASEKDQSEPKAAELAEKKTKKVAKESKPKKVSKPRNPASHPTYEEMIKDAIVSLKERTGSSQYAIAKFIEEKHKQLPSNFKKLLLQNLKKNVASGKLVKVKGSFKLSSATRPAAKVKAKPAAKPKAKAVVKPRTKSVTAKPKAAAAKPKSAATKPKAAVGKAKTAAKVKPN---------AKVAKTTTRTSPGKKVATAKPAAKKKTP-VKNVKPKTKTVRSPAKKVAIKRGGRK 248          
BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072VKP5|A0A072VKP5_MEDTR (Linker histone H1 and h5 family protein OS=Medicago truncatula OX=3880 GN=25484327 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.747e-53
Identity = 163/262 (62.21%), Postives = 182/262 (69.47%), Query Frame = 0
Query:    1 MATEEPIVAVESVPEPIVTEPTVTEPEVPEKD--EPTGEVEKTKKTK----ESKPKKASKPRNPASHPSYEEMIKDAIVSLKEKSGSSQYAIAKFIEEKHKQLPANFKKLLLQNLKKKVASGKLVKVKGSFKLSSAA----KKPAVAKPKTKPAAKVASKAKAVAAKPKKAVAKPKTVASKAKPTAAKTKVAAKAKPVVKPKSKGKPAKVAKTSAKTTPGKKVAAAKKVEVAKKVPVKSV--KAKSVKTPVKKVSVKRGGKK 250
            MATEEPIVAVE VPEP +      EP   EKD  EP       KKTK    ESKPKK SKPRNPASHP+YEEMIKDAIVSLKE++GSSQYAIAKFIEEKHKQLP+NFKKLLLQNLKK VASGKLVKVKGSFKLSSA     K  A    K K  A V  + K+V AKPK A AKPK+ A+K K    K K AAK KP          AKVAKT+ +T+PGKKVA AK     K   VK+V  K K+V++P KKV++KRGG+K
Sbjct:    1 MATEEPIVAVEPVPEPTI----AAEPPASEKDQSEPKAAELAEKKTKKVAKESKPKKVSKPRNPASHPTYEEMIKDAIVSLKERTGSSQYAIAKFIEEKHKQLPSNFKKLLLQNLKKNVASGKLVKVKGSFKLSSATKPAAKVKAKPAAKPKAKAVVKPRTKSVTAKPKAAAAKPKSAATKPKAAVGKAKTAAKVKPN---------AKVAKTTTRTSPGKKVATAKPAAKKKTP-VKNVKPKTKTVRSPAKKVAIKRGGRK 248          
BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3NQY8|A0A2K3NQY8_TRIPR (Histone H1 (Fragment) OS=Trifolium pratense OX=57577 GN=histone H1 PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 1.567e-51
Identity = 155/236 (65.68%), Postives = 170/236 (72.03%), Query Frame = 0
Query:   30 EKDEPTGEVEKTKKTKESKPKKASKPRNPASHPSYEEMIKDAIVSLKEKSGSSQYAIAKFIEEKHK-QLPANFKKLLLQNLKKKVASGKLVKVKGSFKL--------------SSAAKKPAVAKPKTKPAAKVASKAKAVAAKPKKAVAKPKTVASKAKPTAAK-------TKVAAKAKPVVKPKSKGKPAKVAKTSAKTTPGKKVAAAKKVEVAKKVPVKSVKAKSVKTPVKKVS 243
            EK+EP  E EK  K  + K  KASKPR+PASHP+YEEMIKDAIVSLKE++GSSQYAIAKFIEEKHK QLP+NFKKLLLQNLKK VASGKLVKVKGSFKL              S A KKPA +KPKTKP+A   SKAK V  KP KA +KPKT A K K T AK       +KVAAK K  VK K K K AKVA+TS +T+PGKKV   KKV  AKK PVKSVK K VK+P KKVS
Sbjct:   20 EKEEPKVEAEKKTKESKPK--KASKPRSPASHPTYEEMIKDAIVSLKERTGSSQYAIAKFIEEKHKQQLPSNFKKLLLQNLKKNVASGKLVKVKGSFKLPSKTTKPSSSVTTASQANKKPAASKPKTKPSAS-KSKAKTV-VKP-KAASKPKTAAVKTKTTVAKPKPAAAKSKVAAKPKAGVKAKPKDKSAKVARTSTRTSPGKKV--PKKVVAAKKAPVKSVKPKIVKSPAKKVS 248          
BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6M8I4|A0A2Z6M8I4_TRISU (H15 domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_293870 PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.051e-50
Identity = 164/264 (62.12%), Postives = 180/264 (68.18%), Query Frame = 0
Query:    1 MATEEPIVAVESVPEPIVTEPTVTEPEVPEKDEPTGEVEKTKKTKESKPKKASKPRNPASHPSYEEMIKDAIVSLKEKSGSSQYAIAKFIEEKHKQLPANFKKLLLQNLKKKVASGKLVKVKGSFKLSSAAKKPAVA---------KPKTKPAAKVASKAKAVAAKPKKAVAKPKTVASKAKPTAAKTKV-AAKAKPVVKPKSKGKPAKVAKTSAKTTPGKKVAAA----KKVEVAKKVPVKSVKAKSVKTPVKKVSVKRGGKK 250
            MATEEPIVAVE +PEP  +E                   K +  K SKPKKASKPR+PASHPSYEEMIKDAIVSLKE++GSSQYAIAKFIEEKHKQLP+NFKKLLLQNLKK VASGKLVKVKGSFKLSS  K  +V                     +K KA AAKPK AV K K  A+K K    K+KV AAK K  VK K K K AKVA+TS +T+PGKKV  A    KKV  AKKV VKSVK KSVK+P KKVSVKRGG+K
Sbjct:    1 MATEEPIVAVEPIPEPPASE-------------------KEEPKKASKPKKASKPRSPASHPSYEEMIKDAIVSLKERTGSSQYAIAKFIEEKHKQLPSNFKKLLLQNLKKNVASGKLVKVKGSFKLSSNMKPSSVTTEAKKKPTAAKPKTKPTAAKAKPKAAAAKPKAAVVKSKVAAAKPKAAVVKSKVAAAKPKAGVKAKPKEKSAKVARTSTRTSPGKKVVTAKAVPKKVVAAKKVHVKSVKPKSVKSPAKKVSVKRGGRK 245          
BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. UniProtKB/TrEMBL
Match: tr|G8YZE3|G8YZE3_PEA (Histone H1 subtype 5 OS=Pisum sativum subsp. elatius OX=47742 GN=His5 PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.618e-50
Identity = 176/265 (66.42%), Postives = 191/265 (72.08%), Query Frame = 0
Query:    1 MATEEPIVAVESVPEPIVTEPTVTEPEVPEKDEPTGEVEKTKKTKESKPKKASKPRNPASHPSYEEMIKDAIVSLKEKSGSSQYAIAKFIEEKHKQLPANFKKLLLQNLKKKVASGKLVKVKGSFKLSSAAKKPAVAKPKTKPAAKVAS----------KAKAVAAKPKKAVAKPKTVASKAKPTAAKTKVAAKAKPVVKPKSKGKPAKVAKTSAKTTPG----KKVAAAKKVEVAKKVPVKSVKAKSVKTPVKKVS-VKRGGKK 250
            MATEEPI+AVE VPEP V+E           +EP  E EKTKK KESKPKKASKPRNPASHP+YEEMIKDAIVSLKEK+GSSQYAIAKFIEEK KQLPANFKKLLLQ+LKKKVASGKLVKVKGS+KLS+AAKKP VAKPKTKPAAK  +          KAKAV     K+V      A+     AAK K  AKAK   KPK K K  KVA+TS KTTPG        A KK   AKK PVKSVKAKSVK+P KK + VKRGG+K
Sbjct:    1 MATEEPIIAVEPVPEPPVSEKV---------EEPKAETEKTKKAKESKPKKASKPRNPASHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPANFKKLLLQSLKKKVASGKLVKVKGSYKLSAAAKKPTVAKPKTKPAAKAKAAVKAKTAARPKAKAVVKPKSKSVTTKPKAAAAKPKAAAKPKAVAKAKAAAKPKPKAKSTKVARTSTKTTPGKKVAVAKPAPKKAAAAKKAPVKSVKAKSVKSPAKKATGVKRGGRK 256          
BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. UniProtKB/Swiss-Prot
Match: sp|P08283|H1_PEA (Histone H1 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.099e-50
Identity = 116/129 (89.92%), Postives = 122/129 (94.57%), Query Frame = 0
Query:    1 MATEEPIVAVESVPEPIVTEPT-VTEPEVPEKDEPTGEVEKTKKTKESKPKKASKPRNPASHPSYEEMIKDAIVSLKEKSGSSQYAIAKFIEEKHKQLPANFKKLLLQNLKKKVASGKLVKVKGSFKLS 128
            MATEEPIVAVE+VPEPIVTEPT +TEPEVPEK+EP  EVEKTKK K SKPKKASKPRNPASHP+YEEMIKDAIVSLKEK+GSSQYAIAKFIEEK KQLPANFKKLLLQNLKK VASGKL+KVKGSFKLS
Sbjct:    1 MATEEPIVAVETVPEPIVTEPTTITEPEVPEKEEPKAEVEKTKKAKGSKPKKASKPRNPASHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPANFKKLLLQNLKKNVASGKLIKVKGSFKLS 129          
BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. UniProtKB/Swiss-Prot
Match: sp|P26569|H12_ARATH (Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At2g30620 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 2.956e-39
Identity = 116/223 (52.02%), Postives = 136/223 (60.99%), Query Frame = 0
Query:   59 ASHPSYEEMIKDAIVSLKEKSGSSQYAIAKFIEEKHKQLPANFKKLLLQNLKKKVASGKLVKVKGSFKLSSAAKKPAVAKPKTKPAAKVASKAKAVAAKPKKAVAKPKTVAS-------------------------KAKPTAAKTK------VAAKAKPVVKPKSKGKPAKVAKTSAKTTPGKKVAA-AKKVEVAKKVPVKSVKAKSVKTPVKKVSVKRGGK 249
            +SHP+YEEMIKDAIV+LKE++GSSQYAI KFIEEKHK LP  F+KLLL NLK+ VAS KLVKVK SFK+ SA    + A P  KPAA V  KA  V AKPK  VA     A                          KAK TAAK K      V+       KPK+K +PAK ++TS +T+PGKKVAA AKKV V KK P KSVK   VK+P K+ S ++  K
Sbjct:   60 SSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSAR---SAATP--KPAAPVKKKA-TVVAKPKGKVAAAVAPAKAKAAAKGTKKPAAKVVAKAKVTAKPKAKVTAAKPKSKSVAAVSKTKAVAAKPKAKERPAKASRTSTRTSPGKKVAAPAKKVAVTKKAPAKSVK---VKSPAKRASTRKAKK 273          
BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. UniProtKB/Swiss-Prot
Match: sp|P27806|H1_WHEAT (Histone H1 OS=Triticum aestivum OX=4565 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.517e-25
Identity = 50/78 (64.10%), Postives = 62/78 (79.49%), Query Frame = 0
Query:   54 KPRNPASHPSYEEMIKDAIVSLKEKSGSSQYAIAKFIEEKHK-QLPANFKKLLLQNLKKKVASGKLVKVKGSFKLSSA 130
            KPR   +HPSY EM+ +AI +LKE+SGSS  AI KFIE+KHK  LPANF+K+LL  +KK VA+GKL KVKGS+KL+ A
Sbjct:   48 KPRVTPAHPSYAEMVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAAGKLTKVKGSYKLAKA 125          
BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. UniProtKB/Swiss-Prot
Match: sp|P26568|H11_ARATH (Histone H1.1 OS=Arabidopsis thaliana OX=3702 GN=At1g06760 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.072e-24
Identity = 57/76 (75.00%), Postives = 65/76 (85.53%), Query Frame = 0
Query:   52 ASKPRNPASHPSYEEMIKDAIVSLKEKSGSSQYAIAKFIEEKHKQLPANFKKLLLQNLKKKVASGKLVKVKGSFKL 127
            A K R  +SHP+YEEMIKDAIV+LKE++GSSQYAI KFIEEK K+LP  F+KLLL NLK+ VASGKLVKVK SFKL
Sbjct:   53 APKKRTVSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVKASFKL 128          
BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9M5W4|H1_EUPES (Histone H1 OS=Euphorbia esula OX=3993 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.507e-23
Identity = 51/68 (75.00%), Postives = 61/68 (89.71%), Query Frame = 0
Query:   59 ASHPSYEEMIKDAIVSLKEKSGSSQYAIAKFIEEKHKQLPANFKKLLLQNLKKKVASGKLVKVKGSFK 126
            +SHPS+ EMI DAI +LKE++GSSQYAI KF+E+KHKQLP+NF+KLLL +LKK VASGKLVKVK SFK
Sbjct:   49 SSHPSFFEMISDAISTLKERTGSSQYAINKFVEDKHKQLPSNFRKLLLFHLKKLVASGKLVKVKNSFK 116          
BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. UniProtKB/Swiss-Prot
Match: sp|P40267|H1_SOLPN (Histone H1 OS=Solanum pennellii OX=28526 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.319e-22
Identity = 53/116 (45.69%), Postives = 70/116 (60.34%), Query Frame = 0
Query:   36 GEVE---------KTKKTKESKPKKASKPRNP----------ASHPSYEEMIKDAIVSLKEKSGSSQYAIAKFIEEKHK-QLPANFKKLLLQNLKKKVASGKLVKVKGSFKLSSAA 131
            GEVE         +  K KE  P    KPR P           +HP Y +MIK+A+++L EK GSS YA+AK++E+KHK +LPANF+K+L   LK   A GKL+K+K S+KLS A 
Sbjct:    5 GEVENPTVVQRPTEASKVKEQAPATDKKPRAPKEKKPKSAKAVTHPPYFQMIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASYKLSEAG 120          
BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. UniProtKB/Swiss-Prot
Match: sp|P23444|H1_MAIZE (Histone H1 OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 7.236e-22
Identity = 47/72 (65.28%), Postives = 57/72 (79.17%), Query Frame = 0
Query:   60 SHPSYEEMIKDAIVSLKEKSGSSQYAIAKFIEEKHK-QLPANFKKLLLQNLKKKVASGKLVKVKGSFKLSSA 130
            +H  Y EM+ +AI SLKE++GSS YAIAKF+E+KHK +LP NF+KLL   LKK VA GKL KVK S+KLSSA
Sbjct:   49 THLPYAEMVSEAITSLKERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKVKNSYKLSSA 120          
BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q08864|H11_VOLCA (Histone H1-I OS=Volvox carteri OX=3067 GN=H1-I PE=2 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 1.253e-16
Identity = 58/109 (53.21%), Postives = 69/109 (63.30%), Query Frame = 0
Query:   60 SHPSYEEMIKDAIVSLKEKSGSSQYAIAKFIEEKHKQ--LPANFKKLLLQNLKKKVASGKLVKVKGSFKLSSAAKKPAVAKPKTKPAAKVASKAKAVAAKPKKAVAKPK 166
            +HP Y EM+KDAI +LKE++GSS  A+ KFIE K+ +     NF K L Q +K  V  GKLVKVKGSFKLS A K  A AK  T   AK   +     AKPKK+ AKPK
Sbjct:   58 THPPYIEMVKDAITTLKERNGSSLPALKKFIENKYGKDIHDKNFAKTLSQVVKTFVKGGKLVKVKGSFKLSEALK--AKAKKSTPKKAKADGE-----AKPKKSEAKPK 159          
BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. UniProtKB/Swiss-Prot
Match: sp|P54671|H1_DICDI (Histone H1 OS=Dictyostelium discoideum OX=44689 GN=H1 PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 5.949e-13
Identity = 35/74 (47.30%), Postives = 45/74 (60.81%), Query Frame = 0
Query:   60 SHPSYEEMIKDAIVSLKEKSGSSQYAIAKFIEEKHKQLPANFKKLLLQNLKKKVASGKLVKVKGSFKLSSAAKK 133
            +HP+Y+ MI  AI   K+++GSSQ AI K+IE  +   P  FK  L   LK+ VA G L  VK S+KLS   KK
Sbjct:   23 NHPTYQVMISTAIAHYKDRTGSSQPAIIKYIEANYNVAPDTFKTQLKLALKRLVAKGTLTMVKASYKLSEEGKK 96          
BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q08865|H12_VOLCA (Histone H1-II OS=Volvox carteri OX=3067 GN=H1-II PE=2 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 1.500e-12
Identity = 41/81 (50.62%), Postives = 53/81 (65.43%), Query Frame = 0
Query:   54 KPRNPASHPSYEEMIKDAIVSLKEKSGSSQYAIAKFIEEKHKQLPAN--FKKLLLQNLKKKVASGKLVKVKGSFKLSSAAK 132
            KP+   +HP Y +M+ DAI+SLKE+ GSS  A+ KFIE K+ +   +  F K L   LK  V +GKLVKVK S+KLS A K
Sbjct:   18 KPKTAPTHPPYIQMVTDAILSLKERDGSSLPALKKFIEAKYGKDIHDKKFPKTLSLALKTFVKNGKLVKVKNSYKLSDAQK 98          
BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. Araport11
Match: AT2G30620.1 (| winged-helix DNA-binding transcription factor family protein | Chr2:13045360-13046267 FORWARD LENGTH=273 | 201606)

HSP 1 Score: 140.198 bits (352), Expect = 3.024e-40
Identity = 116/223 (52.02%), Postives = 136/223 (60.99%), Query Frame = 0
Query:   59 ASHPSYEEMIKDAIVSLKEKSGSSQYAIAKFIEEKHKQLPANFKKLLLQNLKKKVASGKLVKVKGSFKLSSAAKKPAVAKPKTKPAAKVASKAKAVAAKPKKAVAKPKTVAS-------------------------KAKPTAAKTK------VAAKAKPVVKPKSKGKPAKVAKTSAKTTPGKKVAA-AKKVEVAKKVPVKSVKAKSVKTPVKKVSVKRGGK 249
            +SHP+YEEMIKDAIV+LKE++GSSQYAI KFIEEKHK LP  F+KLLL NLK+ VAS KLVKVK SFK+ SA    + A P  KPAA V  KA  V AKPK  VA     A                          KAK TAAK K      V+       KPK+K +PAK ++TS +T+PGKKVAA AKKV V KK P KSVK   VK+P K+ S ++  K
Sbjct:   60 SSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSAR---SAATP--KPAAPVKKKA-TVVAKPKGKVAAAVAPAKAKAAAKGTKKPAAKVVAKAKVTAKPKAKVTAAKPKSKSVAAVSKTKAVAAKPKAKERPAKASRTSTRTSPGKKVAAPAKKVAVTKKAPAKSVK---VKSPAKRASTRKAKK 273          
BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. Araport11
Match: AT2G30620.2 (| winged-helix DNA-binding transcription factor family protein | Chr2:13045360-13046267 FORWARD LENGTH=202 | 201606)

HSP 1 Score: 135.961 bits (341), Expect = 2.272e-39
Identity = 97/192 (50.52%), Postives = 115/192 (59.90%), Query Frame = 0
Query:   59 ASHPSYEEMIKDAIVSLKEKSGSSQYAIAKFIEEKHKQLPANFKKLLLQNLKKKVASGKLVKVKGSFKLSSAAKKPAVAKPKTKPAAKVASKAKAVAAKPKKAVAKPKTVASKAKPTAAKTKVAAKAKPVVKPKSKGKPAKVAKTSAKTTPGKKVAA-AKKVEVAKKVPVKSVKAKSVKTPVKKVSVKRGGK 249
            +SHP+YEEMIKDAIV+LKE++GSSQYAI KFIEEKHK LP  F+KLLL NLK+ VAS KLVKVK SFK+ SA    + A P  KPAA V  KA  VA                                  KPK+       ++TS +T+PGKKVAA AKKV V KK P KSVK   VK+P K+ S ++  K
Sbjct:   60 SSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSAR---SAATP--KPAAPVKKKATVVA----------------------------------KPKA-------SRTSTRTSPGKKVAAPAKKVAVTKKAPAKSVK---VKSPAKRASTRKAKK 202          
BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. Araport11
Match: AT1G06760.1 (| winged-helix DNA-binding transcription factor family protein | Chr1:2076687-2077616 REVERSE LENGTH=274 | 201606)

HSP 1 Score: 101.293 bits (251), Expect = 2.120e-25
Identity = 57/76 (75.00%), Postives = 65/76 (85.53%), Query Frame = 0
Query:   52 ASKPRNPASHPSYEEMIKDAIVSLKEKSGSSQYAIAKFIEEKHKQLPANFKKLLLQNLKKKVASGKLVKVKGSFKL 127
            A K R  +SHP+YEEMIKDAIV+LKE++GSSQYAI KFIEEK K+LP  F+KLLL NLK+ VASGKLVKVK SFKL
Sbjct:   53 APKKRTVSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVKASFKL 128          
BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. Araport11
Match: AT2G18050.1 (| histone H1-3 | Chr2:7846095-7846670 FORWARD LENGTH=167 | 201606)

HSP 1 Score: 88.1965 bits (217), Expect = 1.806e-21
Identity = 49/84 (58.33%), Postives = 60/84 (71.43%), Query Frame = 0
Query:   52 ASKPRNP--ASHPSYEEMIKDAIVSLKEKSGSSQYAIAKFIEEKHKQ-LPANFKKLLLQNLKKKVASGKLVKVKGSFKLSSAAK 132
            A KPR P   +HP Y +MIK+A++ LKEK+GSS YAIAK IEEKHK  LP +F+K L   LK  VA GKLVK++ S+KLS   K
Sbjct:   13 AKKPRKPKTTTHPPYFQMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRASYKLSDTTK 96          
BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. Araport11
Match: AT2G18050.2 (| histone H1-3 | Chr2:7846254-7846670 FORWARD LENGTH=138 | 201606)

HSP 1 Score: 75.0998 bits (183), Expect = 8.425e-17
Identity = 47/106 (44.34%), Postives = 66/106 (62.26%), Query Frame = 0
Query:   67 MIKDAIVSLKEKSGSSQYAIAKFIEEKHKQ-LPANFKKLLLQNLKKKVASGKLVKVKGSFKLSSAAKKPAVAKPKTKPAAK--------VASKAKAVAAKPKKAVA 163
            MIK+A++ LKEK+GSS YAIAK IEEKHK  LP +F+K L   LK  VA GKLVK++ S+KLS   K   + + + K   K        +  + ++ + +PKK V+
Sbjct:    1 MIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRASYKLSDTTK--MITRQQDKKNKKNMKQEDKEITKRTRSSSTRPKKTVS 104          
The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0A8KXA9|A0A0A8KXA9_9FABA3.709e-6369.58His5 protein OS=Vavilovia formosa OX=512756 GN=his... [more]
tr|A0A2K3LH43|A0A2K3LH43_TRIPR2.733e-5965.66Histone H1 (Fragment) OS=Trifolium pratense OX=575... [more]
tr|A0A2K3KDQ2|A0A2K3KDQ2_TRIPR4.794e-5668.33Histone H1 (Fragment) OS=Trifolium pratense OX=575... [more]
tr|A0A2K3LZD3|A0A2K3LZD3_TRIPR1.744e-5567.87Histone H1 (Fragment) OS=Trifolium pratense OX=575... [more]
tr|G8YZP6|G8YZP6_PEA5.396e-5567.91Histone H1 subtype 3 OS=Pisum sativum subsp. sativ... [more]
tr|I3S6T7|I3S6T7_MEDTR1.294e-5361.83H15 domain-containing protein OS=Medicago truncatu... [more]
tr|A0A072VKP5|A0A072VKP5_MEDTR4.747e-5362.21Linker histone H1 and h5 family protein OS=Medicag... [more]
tr|A0A2K3NQY8|A0A2K3NQY8_TRIPR1.567e-5165.68Histone H1 (Fragment) OS=Trifolium pratense OX=575... [more]
tr|A0A2Z6M8I4|A0A2Z6M8I4_TRISU1.051e-5062.12H15 domain-containing protein OS=Trifolium subterr... [more]
tr|G8YZE3|G8YZE3_PEA8.618e-5066.42Histone H1 subtype 5 OS=Pisum sativum subsp. elati... [more]
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BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|P08283|H1_PEA4.099e-5089.92Histone H1 OS=Pisum sativum OX=3888 PE=2 SV=1[more]
sp|P26569|H12_ARATH2.956e-3952.02Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At... [more]
sp|P27806|H1_WHEAT1.517e-2564.10Histone H1 OS=Triticum aestivum OX=4565 PE=2 SV=2[more]
sp|P26568|H11_ARATH2.072e-2475.00Histone H1.1 OS=Arabidopsis thaliana OX=3702 GN=At... [more]
sp|Q9M5W4|H1_EUPES1.507e-2375.00Histone H1 OS=Euphorbia esula OX=3993 PE=2 SV=1[more]
sp|P40267|H1_SOLPN3.319e-2245.69Histone H1 OS=Solanum pennellii OX=28526 PE=2 SV=1[more]
sp|P23444|H1_MAIZE7.236e-2265.28Histone H1 OS=Zea mays OX=4577 PE=2 SV=2[more]
sp|Q08864|H11_VOLCA1.253e-1653.21Histone H1-I OS=Volvox carteri OX=3067 GN=H1-I PE=... [more]
sp|P54671|H1_DICDI5.949e-1347.30Histone H1 OS=Dictyostelium discoideum OX=44689 GN... [more]
sp|Q08865|H12_VOLCA1.500e-1250.62Histone H1-II OS=Volvox carteri OX=3067 GN=H1-II P... [more]
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BLAST of Vfaba.Hedin2.R1.3g061480.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11)
Total hits: 5
Match NameE-valueIdentityDescription
AT2G30620.13.024e-4052.02| winged-helix DNA-binding transcription factor fa... [more]
AT2G30620.22.272e-3950.52| winged-helix DNA-binding transcription factor fa... [more]
AT1G06760.12.120e-2575.00| winged-helix DNA-binding transcription factor fa... [more]
AT2G18050.11.806e-2158.33| histone H1-3 | Chr2:7846095-7846670 FORWARD LENG... [more]
AT2G18050.28.425e-1744.34| histone H1-3 | Chr2:7846254-7846670 FORWARD LENG... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005819Linker histone H1/H5PRINTSPR00624HISTONEH5coord: 214..233
score: 23.89
coord: 74..91
score: 39.51
coord: 47..68
score: 46.46
coord: 153..167
score: 36.3
coord: 192..209
score: 25.93
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 55..147
e-value: 3.3E-24
score: 86.9
IPR005818Linker histone H1/H5, domain H15PFAMPF00538Linker_histonecoord: 61..128
e-value: 7.7E-21
score: 74.2
IPR005818Linker histone H1/H5, domain H15PROSITEPS51504H15coord: 60..129
score: 33.055824
IPR005818Linker histone H1/H5, domain H15CDDcd00073H15coord: 58..140
e-value: 3.30385E-17
score: 72.2687
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 189..211
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..65
NoneNo IPR availablePANTHERPTHR11467HISTONE H1coord: 40..228
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 57..137

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Hedin2.R1.3g061480.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g061480.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g061480.1; organism=Vicia faba; type=mRNA; length=753bp
ATGGCCACAGAAGAACCAATTGTCGCGGTGGAATCAGTTCCCGAACCAAT
TGTGACCGAACCAACCGTCACCGAGCCTGAGGTCCCGGAGAAGGATGAAC
CAACTGGTGAAGTAGAGAAGACCAAGAAAACGAAGGAGTCCAAGCCTAAG
AAAGCTTCCAAACCACGAAACCCTGCTTCCCATCCTTCTTACGAAGAGAT
GATTAAGGACGCGATAGTCTCGCTGAAGGAGAAGAGTGGCTCGAGCCAAT
ACGCGATTGCGAAATTCATTGAAGAGAAACACAAGCAGCTTCCTGCTAAC
TTCAAGAAGCTATTGCTTCAAAATTTGAAGAAAAAAGTTGCATCTGGAAA
GCTTGTTAAGGTTAAAGGTTCGTTCAAGCTTTCTTCAGCGGCTAAGAAGC
CTGCCGTCGCCAAGCCGAAGACAAAGCCAGCTGCAAAGGTTGCTTCAAAG
GCCAAAGCTGTAGCAGCCAAGCCCAAAAAAGCTGTTGCCAAGCCCAAAAC
GGTTGCTTCTAAGGCTAAACCAACTGCTGCGAAGACTAAAGTTGCTGCCA
AGGCTAAGCCAGTTGTGAAACCGAAGTCCAAGGGGAAGCCAGCGAAGGTT
GCAAAGACATCGGCTAAGACAACACCGGGGAAGAAAGTTGCCGCTGCGAA
GAAAGTTGAGGTTGCAAAGAAAGTTCCGGTTAAGAGCGTTAAGGCTAAAA
GCGTGAAGACTCCAGTGAAGAAGGTTTCTGTTAAGAGAGGTGGAAAGAAA
TGA
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protein sequence of Vfaba.Hedin2.R1.3g061480.1_vfh_v1

>Vfaba.Hedin2.R1.3g061480.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g061480.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g061480.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=250bp
MATEEPIVAVESVPEPIVTEPTVTEPEVPEKDEPTGEVEKTKKTKESKPK
KASKPRNPASHPSYEEMIKDAIVSLKEKSGSSQYAIAKFIEEKHKQLPAN
FKKLLLQNLKKKVASGKLVKVKGSFKLSSAAKKPAVAKPKTKPAAKVASK
AKAVAAKPKKAVAKPKTVASKAKPTAAKTKVAAKAKPVVKPKSKGKPAKV
AKTSAKTTPGKKVAAAKKVEVAKKVPVKSVKAKSVKTPVKKVSVKRGGKK
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mRNA from alignment at chr3:381499238..381500156-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Hedin2.R1.3g061480.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g061480.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g061480.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr3:381499238..381500156- (Vicia faba
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR005819H1/H5
IPR036388WH-like_DNA-bd_sf
IPR005818Histone_H1/H5_H15
IPR036390WH_DNA-bd_sf
Vocabulary: Biological Process
TermDefinition
GO:0006334nucleosome assembly
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
Vocabulary: Molecular Function
TermDefinition
GO:0030527structural constituent of chromatin
GO:0003677DNA binding