Vfaba.Hedin2.R1.5g178400.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. UniProtKB/TrEMBL
Match: tr|V7BLY9|V7BLY9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G089100g PE=3 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 4.331e-81 Identity = 120/124 (96.77%), Postives = 122/124 (98.39%), Query Frame = 0
Query: 65 MSRASAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED 188
MSR SAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTV+REK+KI VTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED
Sbjct: 1 MSRGSAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVAREKTKIIVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED 124
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6P5YR37|A0A6P5YR37_DURZI (60S ribosomal protein L22-3 OS=Durio zibethinus OX=66656 GN=LOC111294073 PE=3 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 2.800e-73 Identity = 108/124 (87.10%), Postives = 117/124 (94.35%), Query Frame = 0
Query: 65 MSRASAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED 188
MSR +AAG KGKKKG TFTIDC+KPVEDKIMDIASLEKFLQERIKVGGKAGALG++VT++R+KSKI VTSD FSKRYLKYLTK+YLKKHNVRDWLRVIASNKDR +YELRYFNIAENEGEEED
Sbjct: 1 MSRGNAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLQERIKVGGKAGALGETVTLTRDKSKIIVTSDGAFSKRYLKYLTKRYLKKHNVRDWLRVIASNKDRTVYELRYFNIAENEGEEED 124
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A2YXH3|A0A6A2YXH3_HIBSY (60S ribosomal protein L22-2 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111151pilonHSYRG00035 PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 2.241e-71 Identity = 106/124 (85.48%), Postives = 114/124 (91.94%), Query Frame = 0
Query: 65 MSRASAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED 188
MSR S AG+KGKKKG TFTIDC KPVEDKIMDI+SLEKFLQERIKVGGKAGALG++V ++REKSK TVTSD FSKRYLK LTKKYLKKHNVRDWLRVIAS+KDR +YELRYFNIAENEGEEED
Sbjct: 1 MSRGSMAGSKGKKKGVTFTIDCWKPVEDKIMDISSLEKFLQERIKVGGKAGALGETVMITREKSKFTVTSDGEFSKRYLKCLTKKYLKKHNVRDWLRVIASDKDRTVYELRYFNIAENEGEEED 124
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6N2KTC2|A0A6N2KTC2_SALVM (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS137887 PE=3 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.645e-70 Identity = 119/124 (95.97%), Postives = 123/124 (99.19%), Query Frame = 0
Query: 65 MSRASAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED 188
MS+ASA GAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTV+REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVI+SNKDRN+YELRYFNIAENEGEEED
Sbjct: 1 MSKASAPGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVISSNKDRNVYELRYFNIAENEGEEED 124
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A7J6G6F9|A0A7J6G6F9_CANSA (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_003501 PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.571e-69 Identity = 118/124 (95.16%), Postives = 121/124 (97.58%), Query Frame = 0
Query: 65 MSRASAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED 188
MSR SAA KGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTV+REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVI+SNKDRN+YELRYFNIAENEGEEED
Sbjct: 1 MSRGSAAAPKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVISSNKDRNVYELRYFNIAENEGEEED 124
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6P4DNH3|A0A6P4DNH3_ARADU (60S ribosomal protein L22-2 OS=Arachis duranensis OX=130453 GN=LOC107492152 PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.893e-69 Identity = 118/124 (95.16%), Postives = 120/124 (96.77%), Query Frame = 0
Query: 65 MSRASAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED 188
MSR A GAKGKKKGATFTIDC KPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREK+KITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRN+YELRYFNIAENEGEEED
Sbjct: 1 MSRGGAVGAKGKKKGATFTIDCTKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKNKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED 124
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A444YJU5|A0A444YJU5_ARAHY (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A06g027370 PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.893e-69 Identity = 118/124 (95.16%), Postives = 120/124 (96.77%), Query Frame = 0
Query: 65 MSRASAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED 188
MSR A GAKGKKKGATFTIDC KPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREK+KITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRN+YELRYFNIAENEGEEED
Sbjct: 1 MSRGGAVGAKGKKKGATFTIDCTKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKNKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED 124
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2P5BTK9|A0A2P5BTK9_TREOI (Ribosomal protein OS=Trema orientale OX=63057 GN=TorRG33x02_309410 PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 2.544e-69 Identity = 118/124 (95.16%), Postives = 120/124 (96.77%), Query Frame = 0
Query: 65 MSRASAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED 188
MSR SAA KGKKKGATFTIDC KPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTV+REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRN+YELRYFNIAENEGEEED
Sbjct: 1 MSRGSAAAPKGKKKGATFTIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED 124
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6N2KCU1|A0A6N2KCU1_SALVM (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS63633 PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 3.692e-69 Identity = 115/124 (92.74%), Postives = 124/124 (100.00%), Query Frame = 0
Query: 65 MSRASAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED 188
MS+A+AAG+KGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGD+VT++REK+KITVT+DSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRN+YELRYFNIAENEGEEED
Sbjct: 1 MSKATAAGSKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVTITREKNKITVTADSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED 124
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2I4H1M2|A0A2I4H1M2_JUGRE (60S ribosomal protein L22-3-like OS=Juglans regia OX=51240 GN=LOC109012705 PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 6.598e-69 Identity = 117/124 (94.35%), Postives = 122/124 (98.39%), Query Frame = 0
Query: 65 MSRASAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED 188
MSRA+A G KGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGD+VTV+REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDR++YELRYFNIAENEGEEED
Sbjct: 1 MSRANAPGPKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVTVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 124
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9M9W1|RL222_ARATH (60S ribosomal protein L22-2 OS=Arabidopsis thaliana OX=3702 GN=RPL22B PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 3.321e-66 Identity = 109/124 (87.90%), Postives = 118/124 (95.16%), Query Frame = 0
Query: 65 MSRASAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED 188
MSR AA AKGKKKG +FTIDC+KPV+DKIM+IASLEKFLQERIKVGGKAGALGDSVT++REKSKITVT+D FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAENEGEEED
Sbjct: 1 MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEGEEED 124
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FE58|RL223_ARATH (60S ribosomal protein L22-3 OS=Arabidopsis thaliana OX=3702 GN=RPL22C PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.246e-49 Identity = 97/113 (85.84%), Postives = 108/113 (95.58%), Query Frame = 0
Query: 65 MSRASAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYF 177
MSR +AA AKGKKKG +FTIDC+KPV+DKIM+IASLEKFLQERIKVGGKAGALGDSV+++REKSKITVT+D FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYF
Sbjct: 1 MSRGNAAAAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVSITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYF 113
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SRX7|RL221_ARATH (Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana OX=3702 GN=RPL22A PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.326e-43 Identity = 83/122 (68.03%), Postives = 103/122 (84.43%), Query Frame = 0
Query: 68 ASAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGE-EED 188
A ++GA KKKG +F IDC+KPV+D I++IA+LEKFLQERIKV GKAGALG+SV+++R KI V ++SNFSKRYLKYLTKKYLKK+N+RDWLRVIASNKD+N+YE+RYF I + EED
Sbjct: 6 AKSSGAGAKKKGVSFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVSITRYNGKINVNANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDEVASYEED 127
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q54JE3|RL221_DICDI (60S ribosomal protein L22 1 OS=Dictyostelium discoideum OX=44689 GN=rpl22 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 9.722e-35 Identity = 60/110 (54.55%), Postives = 79/110 (71.82%), Query Frame = 0
Query: 77 KKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEE 186
KK F IDC P KI+D+A+ EK+L +RIKV K G LG +V +S++KSKI + + FSKRYLKYLTKK+LK +RD+LRV+A+ K N YELRYFNI ++E +E
Sbjct: 10 KKSHKFVIDCTAPA-GKIVDVAAFEKYLHDRIKVDNKVGNLGSTVVISKDKSKIIINTTIPFSKRYLKYLTKKFLKFKQIRDFLRVVATTK--NTYELRYFNIGDSESQE 116
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q09668|RL22_SCHPO (60S ribosomal protein L22 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl22 PE=1 SV=3) HSP 1 Score: 121.324 bits (303), Expect = 1.245e-34 Identity = 61/107 (57.01%), Postives = 77/107 (71.96%), Query Frame = 0
Query: 82 FTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSRE-KSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEE 187
+ ID V DKI D+A+ EK+L +RIKV GK G LG SV VSRE SKI V + +FS RYLKYLTKK+LKKH++RDWLRV+++ K +YELRY+N+ EEE
Sbjct: 12 YIIDATAAVNDKIFDVAAFEKYLIDRIKVDGKTGNLGSSVVVSREGSSKIAVIAHIDFSGRYLKYLTKKFLKKHSLRDWLRVVSTKK--GVYELRYYNVVVGNDEEE 116
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. UniProtKB/Swiss-Prot
Match: sp|P52819|RL22_CAEEL (60S ribosomal protein L22 OS=Caenorhabditis elegans OX=6239 GN=rpl-22 PE=1 SV=3) HSP 1 Score: 119.398 bits (298), Expect = 1.085e-33 Identity = 63/122 (51.64%), Postives = 86/122 (70.49%), Query Frame = 0
Query: 66 SRASAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALG-DSVTVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEE 186
++++ + KK F ++C PVED I+ I LE FL E+IKV GK G L ++V V KSK++V S+ FSKRYLKYLTKKYLK++++RDWLRV+A NK N YE+RYF+I N+GE+
Sbjct: 7 AKSAKKALRKKKVHLKFNVECKNPVEDGILRIEDLEAFLNEKIKVNGKTGHLAANNVKVEVAKSKVSVVSEVPFSKRYLKYLTKKYLKRNSLRDWLRVVAVNK--NTYEVRYFHI--NDGED 124
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. UniProtKB/Swiss-Prot
Match: sp|P47198|RL22_RAT (60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 1.204e-33 Identity = 75/113 (66.37%), Postives = 88/113 (77.88%), Query Frame = 0
Query: 70 AAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSV-TVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAE 181
A G K KK+ FT+DC PVED IMD A+ E+FLQERIKV GKAG LG V T+ R KSKITVTS+ FSKRYLKYLTKKYLKK+N+RDWLRV+A++K+ YELRYF I +
Sbjct: 9 AKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEEPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQ 119
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q54GK6|RL222_DICDI (60S ribosomal protein L22 2 OS=Dictyostelium discoideum OX=44689 GN=rpl22a PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.291e-33 Identity = 59/110 (53.64%), Postives = 78/110 (70.91%), Query Frame = 0
Query: 77 KKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEE 186
KK F IDC P KI+D+A+ EK+L +RIKV K LG +V +S++KSKI + + FSKRYLKYLTKK+LK +RD+LRV+A+ K N YELRYFNI ++E +E
Sbjct: 10 KKSHKFVIDCTAPA-GKIVDVAAFEKYLHDRIKVDNKVSNLGSNVVISKDKSKIIINTTIPFSKRYLKYLTKKFLKFKQIRDFLRVVATTK--NTYELRYFNIGDSESQE 116
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. UniProtKB/Swiss-Prot
Match: sp|P67985|RL22_PIG (60S ribosomal protein L22 OS=Sus scrofa OX=9823 GN=RPL22 PE=1 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 2.071e-33 Identity = 75/113 (66.37%), Postives = 88/113 (77.88%), Query Frame = 0
Query: 70 AAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSV-TVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAE 181
A G K KK+ FT+DC PVED IMD A+ E+FLQERIKV GKAG LG V T+ R KSKITVTS+ FSKRYLKYLTKKYLKK+N+RDWLRV+A++K+ YELRYF I +
Sbjct: 9 AKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQ 119
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. UniProtKB/Swiss-Prot
Match: sp|P67984|RL22_MOUSE (60S ribosomal protein L22 OS=Mus musculus OX=10090 GN=Rpl22 PE=1 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 2.071e-33 Identity = 75/113 (66.37%), Postives = 88/113 (77.88%), Query Frame = 0
Query: 70 AAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSV-TVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAE 181
A G K KK+ FT+DC PVED IMD A+ E+FLQERIKV GKAG LG V T+ R KSKITVTS+ FSKRYLKYLTKKYLKK+N+RDWLRV+A++K+ YELRYF I +
Sbjct: 9 AKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQ 119
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. Araport11
Match: AT3G05560.3 (| Ribosomal L22e protein family | Chr3:1614641-1615204 FORWARD LENGTH=124 | 201606) HSP 1 Score: 201.83 bits (512), Expect = 3.398e-67 Identity = 109/124 (87.90%), Postives = 118/124 (95.16%), Query Frame = 0
Query: 65 MSRASAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED 188
MSR AA AKGKKKG +FTIDC+KPV+DKIM+IASLEKFLQERIKVGGKAGALGDSVT++REKSKITVT+D FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAENEGEEED
Sbjct: 1 MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEGEEED 124
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. Araport11
Match: AT3G05560.2 (| Ribosomal L22e protein family | Chr3:1614641-1615204 FORWARD LENGTH=124 | 201606) HSP 1 Score: 201.83 bits (512), Expect = 3.398e-67 Identity = 109/124 (87.90%), Postives = 118/124 (95.16%), Query Frame = 0
Query: 65 MSRASAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED 188
MSR AA AKGKKKG +FTIDC+KPV+DKIM+IASLEKFLQERIKVGGKAGALGDSVT++REKSKITVT+D FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAENEGEEED
Sbjct: 1 MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEGEEED 124
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. Araport11
Match: AT3G05560.1 (| Ribosomal L22e protein family | Chr3:1614641-1615204 FORWARD LENGTH=124 | 201606) HSP 1 Score: 201.83 bits (512), Expect = 3.398e-67 Identity = 109/124 (87.90%), Postives = 118/124 (95.16%), Query Frame = 0
Query: 65 MSRASAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED 188
MSR AA AKGKKKG +FTIDC+KPV+DKIM+IASLEKFLQERIKVGGKAGALGDSVT++REKSKITVT+D FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAENEGEEED
Sbjct: 1 MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEGEEED 124
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. Araport11
Match: AT5G27770.1 (| Ribosomal L22e protein family | Chr5:9836166-9837113 FORWARD LENGTH=124 | 201606) HSP 1 Score: 159.073 bits (401), Expect = 2.298e-50 Identity = 97/113 (85.84%), Postives = 108/113 (95.58%), Query Frame = 0
Query: 65 MSRASAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYF 177
MSR +AA AKGKKKG +FTIDC+KPV+DKIM+IASLEKFLQERIKVGGKAGALGDSV+++REKSKITVT+D FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYF
Sbjct: 1 MSRGNAAAAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVSITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYF 113
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. Araport11
Match: AT1G02830.1 (| Ribosomal L22e protein family | Chr1:625145-625608 REVERSE LENGTH=127 | 201606) HSP 1 Score: 144.05 bits (362), Expect = 2.380e-44 Identity = 83/122 (68.03%), Postives = 103/122 (84.43%), Query Frame = 0
Query: 68 ASAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGE-EED 188
A ++GA KKKG +F IDC+KPV+D I++IA+LEKFLQERIKV GKAGALG+SV+++R KI V ++SNFSKRYLKYLTKKYLKK+N+RDWLRVIASNKD+N+YE+RYF I + EED
Sbjct: 6 AKSSGAGAKKKGVSFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVSITRYNGKINVNANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDEVASYEED 127 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 10
BLAST of Vfaba.Hedin2.R1.5g178400.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 5
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.5g178400.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g178400.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g178400.1; organism=Vicia faba; type=mRNA; length=567bpback to top protein sequence of Vfaba.Hedin2.R1.5g178400.1_vfh_v1 >Vfaba.Hedin2.R1.5g178400.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g178400.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g178400.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=188bpback to top mRNA from alignment at chr5:1238702729..1238704452+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.5g178400.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g178400.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g178400.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr5:1238702729..1238704452+ (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
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