Vfaba.Hedin2.R1.5g183600.1
|
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.5g183600.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072U473|A0A072U473_MEDTR (Acetyltransferase (GNAT) domain protein OS=Medicago truncatula OX=3880 GN=11420857 PE=4 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 1.171e-88 Identity = 126/153 (82.35%), Postives = 134/153 (87.58%), Query Frame = 0 Query: 1 MAKVDLSRISLRPFKLTDIDHFFLWEGDNEVTKNIRWKTCLSREEALAFIKYVCIPHPWRRSICLNDHSIGFVFVYRWSGDYRCKADIGYAIPANYWGHGTATKAIKIVVYHVFNDFSDLLRLQAFADVDNKASHRVLEKAGFLREGVVRKYT 153
MAKVDLSRISLRPFKLTD+D F LW GD+EVTKNIRWKTC SREEA FIK VCIPHPWRRSICL+DHSIGFV VY WSGD RCKAD+GYA+ +NYWG G ATKAIKI + VFNDFSDLLRLQAF VDNKAS RVLEKAGFLREGV+RKYT
Sbjct: 1 MAKVDLSRISLRPFKLTDVDDFMLWAGDDEVTKNIRWKTCNSREEAQTFIKDVCIPHPWRRSICLDDHSIGFVSVYPWSGDDRCKADMGYAVASNYWGQGIATKAIKIALSQVFNDFSDLLRLQAFTYVDNKASQRVLEKAGFLREGVLRKYT 153
BLAST of Vfaba.Hedin2.R1.5g183600.1 vs. UniProtKB/TrEMBL
Match: tr|G7L0S4|G7L0S4_MEDTR (Acetyltransferase (GNAT) domain protein OS=Medicago truncatula OX=3880 GN=11420857 PE=4 SV=2) HSP 1 Score: 265.003 bits (676), Expect = 1.871e-88 Identity = 126/153 (82.35%), Postives = 134/153 (87.58%), Query Frame = 0 Query: 1 MAKVDLSRISLRPFKLTDIDHFFLWEGDNEVTKNIRWKTCLSREEALAFIKYVCIPHPWRRSICLNDHSIGFVFVYRWSGDYRCKADIGYAIPANYWGHGTATKAIKIVVYHVFNDFSDLLRLQAFADVDNKASHRVLEKAGFLREGVVRKYT 153
MAKVDLSRISLRPFKLTD+D F LW GD+EVTKNIRWKTC SREEA FIK VCIPHPWRRSICL+DHSIGFV VY WSGD RCKAD+GYA+ +NYWG G ATKAIKI + VFNDFSDLLRLQAF VDNKAS RVLEKAGFLREGV+RKYT
Sbjct: 1 MAKVDLSRISLRPFKLTDVDDFMLWAGDDEVTKNIRWKTCNSREEAQTFIKDVCIPHPWRRSICLDDHSIGFVSVYPWSGDDRCKADMGYAVASNYWGQGIATKAIKIALSQVFNDFSDLLRLQAFTYVDNKASQRVLEKAGFLREGVLRKYT 153
BLAST of Vfaba.Hedin2.R1.5g183600.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3L1D9|A0A2K3L1D9_TRIPR (Putative N-acetyltransferase OS=Trifolium pratense OX=57577 GN=L195_g028229 PE=4 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 9.313e-88 Identity = 124/153 (81.05%), Postives = 134/153 (87.58%), Query Frame = 0 Query: 1 MAKVDLSRISLRPFKLTDIDHFFLWEGDNEVTKNIRWKTCLSREEALAFIKYVCIPHPWRRSICLNDHSIGFVFVYRWSGDYRCKADIGYAIPANYWGHGTATKAIKIVVYHVFNDFSDLLRLQAFADVDNKASHRVLEKAGFLREGVVRKYT 153
MAKVDLSRISLRPFKLTD+D F LW GDNEVTKN+RWKTC SREEAL FI+ VCIPH WRRSICL+D SIGFV VYRWSGD CKADIGYA+ +NYWG G ATKAIKI + VFNDFSDLLRLQAFA V+NKAS RVLEKAGFL+EGV+RKYT
Sbjct: 1 MAKVDLSRISLRPFKLTDVDDFLLWAGDNEVTKNLRWKTCNSREEALTFIRDVCIPHQWRRSICLDDRSIGFVSVYRWSGDDSCKADIGYAVASNYWGQGIATKAIKIALSQVFNDFSDLLRLQAFAYVENKASQRVLEKAGFLKEGVLRKYT 153
BLAST of Vfaba.Hedin2.R1.5g183600.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445FKZ1|A0A445FKZ1_GLYSO (Putative N-acetyltransferase YoaA OS=Glycine soja OX=3848 GN=D0Y65_052441 PE=4 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 3.526e-83 Identity = 116/153 (75.82%), Postives = 132/153 (86.27%), Query Frame = 0 Query: 1 MAKVDLSRISLRPFKLTDIDHFFLWEGDNEVTKNIRWKTCLSREEALAFIKYVCIPHPWRRSICLNDHSIGFVFVYRWSGDYRCKADIGYAIPANYWGHGTATKAIKIVVYHVFNDFSDLLRLQAFADVDNKASHRVLEKAGFLREGVVRKYT 153
MA+VDLSRISLRPFK++D+D F +W GD++VT+N+RWKTC SREEALAFI+ VCIPHPWRRSICL+D SIGFV VY WSGD RCKADIGYAI NYWG G ATKA+ V VF DF++LLRLQAF DV+NKAS RVLEKAGFLREGV+RKYT
Sbjct: 1 MARVDLSRISLRPFKMSDVDDFLIWAGDDQVTRNLRWKTCGSREEALAFIRDVCIPHPWRRSICLDDRSIGFVSVYPWSGDERCKADIGYAIGTNYWGQGIATKALMTAVPQVFKDFNELLRLQAFVDVENKASQRVLEKAGFLREGVLRKYT 153
BLAST of Vfaba.Hedin2.R1.5g183600.1 vs. UniProtKB/TrEMBL
Match: tr|C6T3M3|C6T3M3_SOYBN (N-acetyltransferase domain-containing protein OS=Glycine max OX=3847 GN=100527210 PE=2 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 3.526e-83 Identity = 116/153 (75.82%), Postives = 132/153 (86.27%), Query Frame = 0 Query: 1 MAKVDLSRISLRPFKLTDIDHFFLWEGDNEVTKNIRWKTCLSREEALAFIKYVCIPHPWRRSICLNDHSIGFVFVYRWSGDYRCKADIGYAIPANYWGHGTATKAIKIVVYHVFNDFSDLLRLQAFADVDNKASHRVLEKAGFLREGVVRKYT 153
MA+VDLSRISLRPFK++D+D F +W GD++VT+N+RWKTC SREEALAFI+ VCIPHPWRRSICL+D SIGFV VY WSGD RCKADIGYAI NYWG G ATKA+ V VF DF++LLRLQAF DV+NKAS RVLEKAGFLREGV+RKYT
Sbjct: 1 MARVDLSRISLRPFKMSDVDDFLIWAGDDQVTRNLRWKTCGSREEALAFIRDVCIPHPWRRSICLDDRSIGFVSVYPWSGDERCKADIGYAIGTNYWGQGIATKALMTAVPQVFKDFNELLRLQAFVDVENKASQRVLEKAGFLREGVLRKYT 153
BLAST of Vfaba.Hedin2.R1.5g183600.1 vs. UniProtKB/TrEMBL
Match: tr|I3SX79|I3SX79_LOTJA (N-acetyltransferase domain-containing protein OS=Lotus japonicus OX=34305 PE=2 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 7.429e-83 Identity = 115/153 (75.16%), Postives = 132/153 (86.27%), Query Frame = 0 Query: 1 MAKVDLSRISLRPFKLTDIDHFFLWEGDNEVTKNIRWKTCLSREEALAFIKYVCIPHPWRRSICLNDHSIGFVFVYRWSGDYRCKADIGYAIPANYWGHGTATKAIKIVVYHVFNDFSDLLRLQAFADVDNKASHRVLEKAGFLREGVVRKYT 153
MAKVDLSR++LRPFKLTD+D F LW GD++VT+N+RWKTC SREE FI+ VCIPHPWRRSIC++D SIGFV VY+W GD RCKADIGYAI +NYWG G AT+A+KIVV VF DF +LLRLQAF DV+NKAS RVLEKAGFLREGV+RKYT
Sbjct: 1 MAKVDLSRVTLRPFKLTDVDDFLLWAGDDQVTRNLRWKTCGSREEVFLFIRDVCIPHPWRRSICVDDRSIGFVSVYQWPGDERCKADIGYAIASNYWGQGIATQALKIVVPQVFMDFPNLLRLQAFTDVENKASQRVLEKAGFLREGVLRKYT 153
BLAST of Vfaba.Hedin2.R1.5g183600.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XUD7|A0A1S2XUD7_CICAR (uncharacterized protein LOC101492518 OS=Cicer arietinum OX=3827 GN=LOC101492518 PE=4 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 3.022e-82 Identity = 119/153 (77.78%), Postives = 129/153 (84.31%), Query Frame = 0 Query: 1 MAKVDLSRISLRPFKLTDIDHFFLWEGDNEVTKNIRWKTCLSREEALAFIKYVCIPHPWRRSICLNDHSIGFVFVYRWSGDYRCKADIGYAIPANYWGHGTATKAIKIVVYHVFNDFSDLLRLQAFADVDNKASHRVLEKAGFLREGVVRKYT 153
M+KVDLS I LRPFKL+D+D F LW GD+EV KNIRWKTC SREEA +FI+ VCIPHPWRRSICLND SIGFV VY WSGD RCKADIGYA+ ANYWG G ATKA+KI + VF DF DLLRLQAFADVDN S RVLEKAGFLREGV+RKYT
Sbjct: 1 MSKVDLSAICLRPFKLSDVDDFLLWAGDDEVIKNIRWKTCGSREEAQSFIRDVCIPHPWRRSICLNDRSIGFVSVYPWSGDDRCKADIGYAVAANYWGQGIATKALKIALSQVFIDFPDLLRLQAFADVDNTGSIRVLEKAGFLREGVLRKYT 153
BLAST of Vfaba.Hedin2.R1.5g183600.1 vs. UniProtKB/TrEMBL
Match: tr|A0A444YK79|A0A444YK79_ARAHY (N-acetyltransferase domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B06g081148 PE=4 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.386e-79 Identity = 111/153 (72.55%), Postives = 131/153 (85.62%), Query Frame = 0 Query: 1 MAKVDLSRISLRPFKLTDIDHFFLWEGDNEVTKNIRWKTCLSREEALAFIKYVCIPHPWRRSICLNDHSIGFVFVYRWSGDYRCKADIGYAIPANYWGHGTATKAIKIVVYHVFNDFSDLLRLQAFADVDNKASHRVLEKAGFLREGVVRKYT 153
M+ +DLS+ISLRPFKL+D+D F LW GD++VT+N+RWKTC SREEALAFI+ VCIPHPWRRSICL+D SIGFV VY WSGD RCKADIGYA+ A+YWG G ATKA+K+ V VFND S L+RLQAF +NKAS RVLEKAGFL+EG++RKYT
Sbjct: 1 MSNLDLSKISLRPFKLSDVDDFLLWAGDDQVTQNLRWKTCGSREEALAFIRDVCIPHPWRRSICLDDRSIGFVSVYPWSGDDRCKADIGYAVAADYWGQGIATKAVKMAVPQVFNDLSHLVRLQAFTSPENKASQRVLEKAGFLKEGLLRKYT 153
BLAST of Vfaba.Hedin2.R1.5g183600.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445CNR8|A0A445CNR8_ARAHY (N-acetyltransferase domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A06g027466 PE=4 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 5.877e-79 Identity = 110/153 (71.90%), Postives = 129/153 (84.31%), Query Frame = 0 Query: 1 MAKVDLSRISLRPFKLTDIDHFFLWEGDNEVTKNIRWKTCLSREEALAFIKYVCIPHPWRRSICLNDHSIGFVFVYRWSGDYRCKADIGYAIPANYWGHGTATKAIKIVVYHVFNDFSDLLRLQAFADVDNKASHRVLEKAGFLREGVVRKYT 153
M+ +DLS+ISLRPFKL+D+D F LW GD++VT+N+RWKTC SREEALAFI+ VCIPHPWRRSICL+D SIGFV VY WSGD RCKADIGYA+ +YWG G ATKA+K+ V VFND S L+RLQAF NKAS RVLEKAGFL+EG++RKYT
Sbjct: 1 MSNLDLSKISLRPFKLSDVDDFLLWAGDDQVTQNLRWKTCGSREEALAFIRDVCIPHPWRRSICLDDRSIGFVSVYPWSGDDRCKADIGYAVAGDYWGQGIATKAVKMAVPQVFNDLSHLVRLQAFTSPQNKASQRVLEKAGFLKEGLLRKYT 153
BLAST of Vfaba.Hedin2.R1.5g183600.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6P4DMD4|A0A6P4DMD4_ARADU (uncharacterized protein LOC107491853 OS=Arachis duranensis OX=130453 GN=LOC107491853 PE=4 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 8.254e-79 Identity = 110/153 (71.90%), Postives = 130/153 (84.97%), Query Frame = 0 Query: 1 MAKVDLSRISLRPFKLTDIDHFFLWEGDNEVTKNIRWKTCLSREEALAFIKYVCIPHPWRRSICLNDHSIGFVFVYRWSGDYRCKADIGYAIPANYWGHGTATKAIKIVVYHVFNDFSDLLRLQAFADVDNKASHRVLEKAGFLREGVVRKYT 153
M+ +DLS+ISLRPFKL+D+D F LW GD++VT+N+RWKTC SREEALAFI+ VCIPHPWRRSICL+D SIGFV VY WSGD RCKADIGYA+ A+YWG G ATKA+K+ V VF+D S L+RLQAF NKAS RVLEKAGFL+EG++RKYT
Sbjct: 1 MSNLDLSKISLRPFKLSDVDDFLLWAGDDQVTQNLRWKTCGSREEALAFIRDVCIPHPWRRSICLDDRSIGFVSVYPWSGDDRCKADIGYAVAADYWGQGIATKAVKMAVPQVFSDLSHLVRLQAFTSPQNKASQRVLEKAGFLKEGLLRKYT 153
BLAST of Vfaba.Hedin2.R1.5g183600.1 vs. Araport11
Match: AT3G22560.1 (| Acyl-CoA N-acyltransferases (NAT) superfamily protein | Chr3:7998915-7999442 REVERSE LENGTH=175 | 201606) HSP 1 Score: 158.303 bits (399), Expect = 6.762e-50 Identity = 76/151 (50.33%), Postives = 102/151 (67.55%), Query Frame = 0 Query: 4 VDLSRISLRPFKLTDIDHFFLWEGDNEVTKNIRWKTCLSREEALAFIKYVCIPHPWRRSICL--NDHSIGFVFVYRWSGDYRCKADIGYAIPANYWGHGTATKAIKIVVYHVFNDFSDLLRLQAFADVDNKASHRVLEKAGFLREGVVRKY 152
++ RI LRPF L+D + F W GD++VT+ +RW + S EEA I IPHPWRRSI L + HSIG+V V SGD RC+AD+ YA+ +WG G AT A+++ V DF +++RLQA +V+NKAS RVLEKAGF +EG++ KY
Sbjct: 3 MESPRIFLRPFNLSDAEDVFKWAGDDDVTRYLRWDSVNSLEEAKQHILNKAIPHPWRRSISLLQDGHSIGYVSVKPDSGDGRCRADLAYAVAKEFWGRGIATAAVRMAVEQALEDFPEVVRLQAVVEVENKASQRVLEKAGFRKEGLLEKY 153
BLAST of Vfaba.Hedin2.R1.5g183600.1 vs. Araport11
Match: AT2G32020.1 (| Acyl-CoA N-acyltransferases (NAT) superfamily protein | Chr2:13631193-13631744 REVERSE LENGTH=183 | 201606) HSP 1 Score: 140.584 bits (353), Expect = 9.389e-43 Identity = 65/153 (42.48%), Postives = 95/153 (62.09%), Query Frame = 0 Query: 1 MAKVDLSRISLRPFKLTDIDHFFLWEGDNEVTKNIRWKTCLSREEALAFIKYVCIPHPWRRSICL-NDHSIGFVFVYRWSGDYRCKADIGYAIPANYWGHGTATKAIKIVVYHVFNDFSDLLRLQAFADVDNKASHRVLEKAGFLREGVVRKY 152
M+ RISLRP L+D+D + +W D +V + W+ C SR+EA+ +I + HPW R+ICL +D IG++ + + +IGY + YWG G AT+A+++V VF +F ++ RL+A DVDN S RVLEK GF REGV+RK+
Sbjct: 12 MSSSPPGRISLRPMTLSDVDDYMVWATDPKVARFCTWEPCTSRDEAIKYITDRVLTHPWLRAICLEDDRPIGYILIMAVDN---IRKEIGYVLARKYWGKGFATEAVRLVTAEVFEEFPEIERLEALVDVDNVGSQRVLEKVGFTREGVMRKF 161
BLAST of Vfaba.Hedin2.R1.5g183600.1 vs. Araport11
Match: AT2G32030.1 (| Acyl-CoA N-acyltransferases (NAT) superfamily protein | Chr2:13632675-13633241 REVERSE LENGTH=188 | 201606) HSP 1 Score: 135.961 bits (341), Expect = 5.813e-41 Identity = 62/146 (42.47%), Postives = 93/146 (63.70%), Query Frame = 0 Query: 8 RISLRPFKLTDIDHFFLWEGDNEVTKNIRWKTCLSREEALAFIKYVCIPHPWRRSICL-NDHSIGFVFVYRWSGDYRCKADIGYAIPANYWGHGTATKAIKIVVYHVFNDFSDLLRLQAFADVDNKASHRVLEKAGFLREGVVRKY 152
+I LRP L+D+D F +W D+ VT+ W+ SRE A+A++ +PHPW R+ICL ND IG + V + +IGY + + YWG G AT+A+++V +F + ++ RL+A DVDN S +VLEK GF++EGV+RK+
Sbjct: 24 KIHLRPMTLSDVDDFMVWATDSNVTRFCTWEPYTSREAAIAYLNDALLPHPWLRAICLDNDRPIGSISVTPVD---EIRGEIGYVLGSKYWGKGIATEAVRLVAGEIFKEKPEMQRLEALVDVDNVGSQKVLEKVGFVKEGVMRKF 166 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.5g183600.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.5g183600.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.5g183600.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 3 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.5g183600.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g183600.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g183600.1; organism=Vicia faba; type=mRNA; length=462bpback to top protein sequence of Vfaba.Hedin2.R1.5g183600.1_vfh_v1 >Vfaba.Hedin2.R1.5g183600.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g183600.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g183600.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=153bpback to top mRNA from alignment at chr5:1269175807..1269176268+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.5g183600.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g183600.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g183600.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr5:1269175807..1269176268+ (Vicia fababack to top |