Vfaba.Hedin2.R1.6g015840.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6N7R8|A0A2Z6N7R8_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_271010 PE=4 SV=1) HSP 1 Score: 345.51 bits (885), Expect = 7.235e-118 Identity = 191/246 (77.64%), Postives = 205/246 (83.33%), Query Frame = 0 Query: 1 MSYLLRSTKSKLLSSSSSLSRAFSSIPRSNNQIGSITPAATELFHRNSATLPIAEENPTKRYTVG----------GDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMSDIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFI 236
MS+LLRSTKSKLLSSSSSLSR FSSIPRS NQIG+I+PA+ ELFHR + TLP A+EN TK +G GDSNV NSLRYQALGLD NV+AG RYG C KSPMLLGVNA+MARNF R V AD LGLAG RRFMSDIPS SE S FRPLSPHLPVYQPQLSSTLSICNRIAGAFL+AV LLFY+IYMK+G+V+LTYDSFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFI
Sbjct: 1 MSWLLRSTKSKLLSSSSSLSRTFSSIPRSTNQIGAISPASAELFHRTTTTLPAADENATKVNVIGVPKNLENKLGGDSNVFNSLRYQALGLDTNVMAGVRYGTNVCATKSPMLLGVNALMARNFVRGVGADALGLAGHRRFMSDIPSKASET---SSFRPLSPHLPVYQPQLSSTLSICNRIAGAFLSAVVLLFYIIYMKIGVVSLTYDSFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFI 243
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/TrEMBL
Match: tr|G7JDI5|G7JDI5_MEDTR (Putative succinate dehydrogenase (Quinone) OS=Medicago truncatula OX=3880 GN=11443418 PE=2 SV=1) HSP 1 Score: 321.242 bits (822), Expect = 2.623e-108 Identity = 181/249 (72.69%), Postives = 196/249 (78.71%), Query Frame = 0 Query: 1 MSYLLRSTKSKLLSSSSSLSRAFSS-IPRSNNQIGSITPAA--TELFHRNSATLPIAEENPTKRYTVG----------GDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMSDIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFI 236
MS+LLRSTKSKL SSSS + S IPRS GS++PAA E FHR + TLP A++N TK + G G +N NSLRYQALGLD NVLAGARYG + KSPMLLG+N +MARN ER V ADTLGLAG RRFMSDIPS TSE K SGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMK+GLV LT+D FYQFVFYSSKLHLLA+EISALAMSYHLYSAIRHLFI
Sbjct: 1 MSWLLRSTKSKLFLSSSSSLSSTFSSIPRST---GSLSPAAPAAEQFHRTTTTLPYADQNSTKGHFSGLPNNLENKLAGHANQFNSLRYQALGLDTNVLAGARYGTQVSGTKSPMLLGLNTLMARNIERGVGADTLGLAGHRRFMSDIPSKTSEAKQ-SGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKVGLVGLTFDPFYQFVFYSSKLHLLAIEISALAMSYHLYSAIRHLFI 245
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Z8S3|A0A1S2Z8S3_CICAR (succinate dehydrogenase subunit 3-1, mitochondrial-like OS=Cicer arietinum OX=3827 GN=LOC101495449 PE=4 SV=1) HSP 1 Score: 320.472 bits (820), Expect = 5.827e-108 Identity = 183/239 (76.57%), Postives = 202/239 (84.52%), Query Frame = 0 Query: 1 MSYLLRSTKSKLLSSSSSLSRAFSSIPRSNNQIGSITPAATELFHRNSATLPIAEENPTKRYTVG---GDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMSDIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFI 236
MS+LLRSTK+KLLSSSSSLSR FSSIPRS NQI ++P A +LFH ++TLP A+ENPTK + G +N + +LRYQA GLD NVLAGARY A AKSPML G+NA+MARN ERSV AD LGLA QRRFMSDIPS TSE KP SGFRPLSPHLPVYQPQLSSTLSI NRI+GAFL+AV LLFYMIYMK GLV+LTYDSFYQFVFYSSKL+LLA+EISALAMSYHLYSAIRHLFI
Sbjct: 1 MSWLLRSTKTKLLSSSSSLSRTFSSIPRSTNQIEPLSPVAAQLFHPTTSTLPTADENPTKVHANGLPNNPANKLGALRYQAFGLDTNVLAGARYATIARAAKSPMLSGLNALMARNSERSVGADPLGLAVQRRFMSDIPSKTSETKP-SGFRPLSPHLPVYQPQLSSTLSIINRISGAFLSAVVLLFYMIYMKTGLVSLTYDSFYQFVFYSSKLNLLALEISALAMSYHLYSAIRHLFI 238
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371HWQ3|A0A371HWQ3_MUCPR (Succinate dehydrogenase subunit 3-2, mitochondrial OS=Mucuna pruriens OX=157652 GN=SDH3-2 PE=4 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 8.631e-105 Identity = 165/249 (66.27%), Postives = 196/249 (78.71%), Query Frame = 0 Query: 1 MSYLLRSTKSKLLSSSSSLSRAFSSIPRSNN---QIGSITPAATELFHRNSATLPIAEENPTKRY----------TVGGDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMSDIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFI 236
MS LLRSTK+KL+SSS LSR F S+ R N+ QIG+++P +LFHRN+AT+P+A+EN R +G +SN I+S Y+A GLD +VLAGARYG K A+ PMLLGVN +MAR+FER + A TLG+ G +RFMSD PS TSE P SGFRPLSPHLP+YQPQLSSTLSICNRIAGAFLA V LLFYMIYMK+GLV+LTYDSFYQF+FYSSKL+LL +EISALA+SYHLYSAIRHLF+
Sbjct: 1 MSRLLRSTKAKLISSS--LSRTFPSLSRPNHDLPQIGTLSPLP-DLFHRNTATMPLAKENAAGRNLTGLPRDPANKLGTNSNAISSSMYKASGLDISVLAGARYGTKVWAAQGPMLLGVNTVMARSFERGMEAGTLGMIGHKRFMSDSPSKTSETNP-SGFRPLSPHLPIYQPQLSSTLSICNRIAGAFLAGVILLFYMIYMKVGLVSLTYDSFYQFIFYSSKLNLLVMEISALAVSYHLYSAIRHLFL 245
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445KG42|A0A445KG42_GLYSO (Succinate dehydrogenase subunit 3-2, mitochondrial OS=Glycine soja OX=3848 GN=D0Y65_016261 PE=4 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 1.317e-95 Identity = 167/252 (66.27%), Postives = 196/252 (77.78%), Query Frame = 0 Query: 1 MSYLLRSTKSKLLSSSSSLS----RAFSSIPRSNNQIGSITPAATELFHRNSATLPIAEEN------------PTKRYTVGGDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMSDIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFI 236
MS+LLRSTKSKLLSSSSS S R F S+PR QIG+I+P +LFHRN+AT+P A+EN P + +G DS+ NS RY+A GL+ NVLAGARY ++ A+ M LGVN +MAR+FERS+ A TLG+ G +RFMSDIPS TSE P SGFRPLSPHLP+YQPQLSSTLSI NRIAGAFLA V L+FYMIYMKLGLV+LTYDSFYQF+FYSSKL+LL +EISALA+SYHLYSAIRHLF+
Sbjct: 1 MSWLLRSTKSKLLSSSSSSSSSLSRTFPSLPRP--QIGAISPLP-DLFHRNTATMPFAKENASGGNLTGLPKVPANK--LGSDSDATNSPRYKASGLNTNVLAGARYVSRVWAAQGQMPLGVNTVMARSFERSMEAGTLGMIGHKRFMSDIPSKTSETNP-SGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILVFYMIYMKLGLVSLTYDSFYQFIFYSSKLNLLVMEISALAVSYHLYSAIRHLFL 246
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/TrEMBL
Match: tr|C6SVE8|C6SVE8_SOYBN (Uncharacterized protein (Fragment) OS=Glycine max OX=3847 GN=100499683 PE=2 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 1.356e-94 Identity = 170/251 (67.73%), Postives = 195/251 (77.69%), Query Frame = 0 Query: 1 MSYLLRSTKSKLLSSSSSLSRAFSSIPRSNN-----QIGSITPAATELFHRNSATLPIAEENPTK----------RYTVGGDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMSDIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFI 236
MS+LLRSTKSKLLSSSSSLSR F S+ RS QIG+I+P +LFHRN+AT+P A+EN + T+G DSN INS RY+A GLD NVLAGAR + A+ PM L VN +MAR+FERS+ A TLG+ G +RFMSDIPS TSE SGFRPLSPHLP+YQPQLSSTLSI NRIAGAFLA V LLFYMIYMKLGLV+LTYDSFYQF+FYSSKL+LL +EISALA+SYHLYSAIRHLF+
Sbjct: 1 MSWLLRSTKSKLLSSSSSLSRTFPSLSRSGPTLDLPQIGAISPLP-DLFHRNTATMPFAKENASGGNLAGLPKVPANTLGSDSNAINSPRYKASGLDTNVLAGARCVSGVWAAQGPMRLVVNTVMARSFERSMEAGTLGMIGHKRFMSDIPSKTSETNL-SGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYMKLGLVSLTYDSFYQFIFYSSKLNLLVMEISALAVSYHLYSAIRHLFL 249
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/TrEMBL
Match: tr|I1KFD0|I1KFD0_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_06G305600 PE=4 SV=1) HSP 1 Score: 281.567 bits (719), Expect = 1.485e-92 Identity = 147/224 (65.62%), Postives = 175/224 (78.12%), Query Frame = 0 Query: 25 SIPRSNNQIGSITPAATELFHRNSATLPIAEEN------------PTKRYTVGGDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMSDIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFI 236
S+PR QIG+I+P +LFHRN+AT+P A+EN P + +G DS+ NS RY+A GL+ NVLAGARY ++ A+ M LGVN +MAR+FERS+ A TLG+ G +RFMSDIPS TSE P SGFRPLSPHLP+YQPQLSSTLSI NRIAGAFLA V L+FYMIYMKLGLV+LTYDSFYQF+FYSSKL+LL +EISALA+SYHLYSAIRHLF+
Sbjct: 27 SLPRP--QIGAISPLP-DLFHRNTATMPFAKENASGGNLTGLPKVPANK--LGSDSDATNSSRYKASGLNTNVLAGARYVSRVWAAQGQMPLGVNTVMARSFERSMEAGTLGMIGHKRFMSDIPSKTSETNP-SGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILVFYMIYMKLGLVSLTYDSFYQFIFYSSKLNLLVMEISALAVSYHLYSAIRHLFL 244
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SBR9|A0A0S3SBR9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G150900 PE=4 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 3.462e-92 Identity = 146/231 (63.20%), Postives = 177/231 (76.62%), Query Frame = 0 Query: 18 SLSRAFSSIPRSNNQIGSITPAATELFHRNSATLPIAEEN------------PTKRYTVGGDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMSDIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFI 236
S SR +P +NQIG+++P T+LFHRN+A+ P+A+EN P + +G DSN I+SL Y+A GL VLAGARYG + A+SPML+GVN +MAR+FERS+ A T G+ G +R MSD+PS TSE P SGFRPLSPHLP+YQPQLSSTLSI NRIAGAFLAAV LLFYMIY+K+G V+LTYDSFYQF+FYSSKLHL +EISALA++YHLYSAIRHL I
Sbjct: 26 SFSRTAHQLP--HNQIGALSPL-TDLFHRNTASTPLAKENAFGGNVTGLPKVPANK--LGCDSNAIDSLMYKASGLYTTVLAGARYGTRGSAAQSPMLMGVNTVMARSFERSMEAGTFGMIGHKRCMSDVPSKTSETNP-SGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAAVILLFYMIYIKMGSVSLTYDSFYQFIFYSSKLHLFVMEISALAVTYHLYSAIRHLRI 250
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9V5N3|A0A0L9V5N3_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan08g119700 PE=4 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 3.462e-92 Identity = 146/231 (63.20%), Postives = 177/231 (76.62%), Query Frame = 0 Query: 18 SLSRAFSSIPRSNNQIGSITPAATELFHRNSATLPIAEEN------------PTKRYTVGGDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMSDIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFI 236
S SR +P +NQIG+++P T+LFHRN+A+ P+A+EN P + +G DSN I+SL Y+A GL VLAGARYG + A+SPML+GVN +MAR+FERS+ A T G+ G +R MSD+PS TSE P SGFRPLSPHLP+YQPQLSSTLSI NRIAGAFLAAV LLFYMIY+K+G V+LTYDSFYQF+FYSSKLHL +EISALA++YHLYSAIRHL I
Sbjct: 26 SFSRTAHQLP--HNQIGALSPL-TDLFHRNTASTPLAKENAFGGNVTGLPKVPANK--LGCDSNAIDSLMYKASGLYTTVLAGARYGTRGSAAQSPMLMGVNTVMARSFERSMEAGTFGMIGHKRCMSDVPSKTSETNP-SGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAAVILLFYMIYIKMGSVSLTYDSFYQFIFYSSKLHLFVMEISALAVTYHLYSAIRHLRI 250
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3VP35|A0A1S3VP35_VIGRR (uncharacterized protein LOC106777138 OS=Vigna radiata var. radiata OX=3916 GN=LOC106777138 PE=4 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 6.669e-92 Identity = 147/231 (63.64%), Postives = 177/231 (76.62%), Query Frame = 0 Query: 18 SLSRAFSSIPRSNNQIGSITPAATELFHRNSATLPIAEEN------------PTKRYTVGGDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMSDIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFI 236
S SR +P +NQIG+++P T+LFHRN+A+ P+A+EN P + +G DSN INSL Y+A GL VLAGARYG + A+SPML+GVN +MAR+FERS+ A T G+ G +R MSD+PS T E P SGFRPLSPHLP+YQPQLSSTLSI NRIAGAFLAAV LLFYMIY+K+G V+LTYDSFYQF+FYSSKLHLL +EISALA++YHLYSAIRHL I
Sbjct: 26 SFSRTAHHLP--HNQIGALSPL-TDLFHRNTASTPLAKENASGGNVTGLPKVPANK--LGCDSNPINSLMYKASGLYTTVLAGARYGTRGSAAQSPMLMGVNTVMARSFERSMEAGTFGMIGHKRCMSDVPSKTCETNP-SGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAAVILLFYMIYIKVGSVSLTYDSFYQFIFYSSKLHLLVMEISALAVTYHLYSAIRHLRI 250
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/Swiss-Prot
Match: sp|P0DKI1|SDH32_ARATH (Succinate dehydrogenase subunit 3-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH3-2 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.331e-24 Identity = 62/165 (37.58%), Postives = 91/165 (55.15%), Query Frame = 0 Query: 66 GDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMS----DIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYH 226
G V+N + LG + N + R +K+ A V A + R+F L + +R S DI +T E K S FRPLSPHL VYQPQ++S LSI NRI+G +L VT Y++Y+K+G++ LTY SFYQ ++++ + + ++ALA YH
Sbjct: 51 GSKPVVNDILGTGLGTN-NAIREEREKSKSTEAAI-----VGAQLTRSFR------ALDVGTSKRLFSTISGDIKTTQEEPKIKS-FRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPSFYQVLYHTQQQLPVITSVTALAAIYH 202
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/Swiss-Prot
Match: sp|P0DKI0|SDH31_ARATH (Succinate dehydrogenase subunit 3-1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH3-1 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.331e-24 Identity = 62/165 (37.58%), Postives = 91/165 (55.15%), Query Frame = 0 Query: 66 GDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMS----DIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYH 226
G V+N + LG + N + R +K+ A V A + R+F L + +R S DI +T E K S FRPLSPHL VYQPQ++S LSI NRI+G +L VT Y++Y+K+G++ LTY SFYQ ++++ + + ++ALA YH
Sbjct: 51 GSKPVVNDILGTGLGTN-NAIREEREKSKSTEAAI-----VGAQLTRSFR------ALDVGTSKRLFSTISGDIKTTQEEPKIKS-FRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPSFYQVLYHTQQQLPVITSVTALAAIYH 202
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/Swiss-Prot
Match: sp|P35721|C560_MARPO (Succinate dehydrogenase cytochrome b560 subunit OS=Marchantia polymorpha OX=3197 GN=SDH3 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.795e-13 Identity = 40/90 (44.44%), Postives = 60/90 (66.67%), Query Frame = 0 Query: 149 RPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLT----YDSFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHL 234
RPLSPHL +Y+PQL+ST SI +RI+GAFLA + LF +++ K+G ++LT Y F+ FY + + V + LA+ YH+ + +RHL
Sbjct: 5 RPLSPHLTIYKPQLTSTFSIFHRISGAFLATMV-LFSILFFKIGDLSLTFYHFYQYFFFLTFYLNWFIISLVNFTLLALCYHMSNGVRHL 93
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q42669|ACOC_CUCMC (Aconitate hydratase (Fragment) OS=Cucumis melo var. conomon OX=3657 GN=ACO PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 3.233e-11 Identity = 37/93 (39.78%), Postives = 51/93 (54.84%), Query Frame = 0 Query: 73 SLRYQALGLDPNVLAGARYG---AKACTAKSPMLLGVNAMMARNFER------------------SVAADTLGLAGQRRFMSDIPSTTSEIKP 144
++RY++ G D +LAGA YG ++ AK PMLLGV A++A++FER AD+LGL G RF D+PS EI+P
Sbjct: 625 AMRYKSEGQDTIILAGAEYGIGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERFTIDLPSNVGEIRP 717
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. Araport11
Match: AT5G09600.3 (| succinate dehydrogenase 3-1 | Chr5:2979220-2980527 FORWARD LENGTH=213 | 201606) HSP 1 Score: 100.138 bits (248), Expect = 1.362e-25 Identity = 62/165 (37.58%), Postives = 91/165 (55.15%), Query Frame = 0 Query: 66 GDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMS----DIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYH 226
G V+N + LG + N + R +K+ A V A + R+F L + +R S DI +T E K S FRPLSPHL VYQPQ++S LSI NRI+G +L VT Y++Y+K+G++ LTY SFYQ ++++ + + ++ALA YH
Sbjct: 51 GSKPVVNDILGTGLGTN-NAIREEREKSKSTEAAI-----VGAQLTRSFR------ALDVGTSKRLFSTISGDIKTTQEEPKIKS-FRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPSFYQVLYHTQQQLPVITSVTALAAIYH 202
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. Araport11
Match: AT5G09600.1 (| succinate dehydrogenase 3-1 | Chr5:2979220-2980527 FORWARD LENGTH=213 | 201606) HSP 1 Score: 100.138 bits (248), Expect = 1.362e-25 Identity = 62/165 (37.58%), Postives = 91/165 (55.15%), Query Frame = 0 Query: 66 GDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMS----DIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYH 226
G V+N + LG + N + R +K+ A V A + R+F L + +R S DI +T E K S FRPLSPHL VYQPQ++S LSI NRI+G +L VT Y++Y+K+G++ LTY SFYQ ++++ + + ++ALA YH
Sbjct: 51 GSKPVVNDILGTGLGTN-NAIREEREKSKSTEAAI-----VGAQLTRSFR------ALDVGTSKRLFSTISGDIKTTQEEPKIKS-FRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPSFYQVLYHTQQQLPVITSVTALAAIYH 202
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. Araport11
Match: AT4G32210.1 (| succinate dehydrogenase 3-2 | Chr4:15556732-15558041 REVERSE LENGTH=213 | 201606) HSP 1 Score: 100.138 bits (248), Expect = 1.362e-25 Identity = 62/165 (37.58%), Postives = 91/165 (55.15%), Query Frame = 0 Query: 66 GDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMS----DIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYH 226
G V+N + LG + N + R +K+ A V A + R+F L + +R S DI +T E K S FRPLSPHL VYQPQ++S LSI NRI+G +L VT Y++Y+K+G++ LTY SFYQ ++++ + + ++ALA YH
Sbjct: 51 GSKPVVNDILGTGLGTN-NAIREEREKSKSTEAAI-----VGAQLTRSFR------ALDVGTSKRLFSTISGDIKTTQEEPKIKS-FRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPSFYQVLYHTQQQLPVITSVTALAAIYH 202
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. Araport11
Match: AT5G09600.2 (| succinate dehydrogenase 3-1 | Chr5:2979777-2980527 FORWARD LENGTH=186 | 201606) HSP 1 Score: 99.3673 bits (246), Expect = 1.408e-25 Identity = 62/166 (37.35%), Postives = 91/166 (54.82%), Query Frame = 0 Query: 65 GGDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMS----DIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYH 226
G V+N + LG + N + R +K+ A V A + R+F L + +R S DI +T E K S FRPLSPHL VYQPQ++S LSI NRI+G +L VT Y++Y+K+G++ LTY SFYQ ++++ + + ++ALA YH
Sbjct: 23 GRSKPVVNDILGTGLGTN-NAIREEREKSKSTEAAI-----VGAQLTRSFR------ALDVGTSKRLFSTISGDIKTTQEEPKIKS-FRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPSFYQVLYHTQQQLPVITSVTALAAIYH 175
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. Araport11
Match: AT4G35830.2 (| aconitase 1 | Chr4:16973007-16977278 REVERSE LENGTH=795 | 201606) HSP 1 Score: 58.9214 bits (141), Expect = 7.714e-10 Identity = 34/93 (36.56%), Postives = 51/93 (54.84%), Query Frame = 0 Query: 73 SLRYQALGLDPNVLAGARYGAKAC---TAKSPMLLGVNAMMARNFER------------------SVAADTLGLAGQRRFMSDIPSTTSEIKP 144
+++Y+ G D +LAGA YG+ + AK PMLLGV A+++++FER A+TLGL GQ + ++P+ SEIKP
Sbjct: 658 AMKYRNEGRDTIILAGAEYGSGSSRDWAAKGPMLLGVKAVISKSFERIHRSNLVGMGIIPLCFKAGEDAETLGLTGQELYTIELPNNVSEIKP 750
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. Araport11
Match: AT4G35830.1 (| aconitase 1 | Chr4:16973007-16977949 REVERSE LENGTH=898 | 201606) HSP 1 Score: 58.9214 bits (141), Expect = 7.841e-10 Identity = 34/93 (36.56%), Postives = 51/93 (54.84%), Query Frame = 0 Query: 73 SLRYQALGLDPNVLAGARYGAKAC---TAKSPMLLGVNAMMARNFER------------------SVAADTLGLAGQRRFMSDIPSTTSEIKP 144
+++Y+ G D +LAGA YG+ + AK PMLLGV A+++++FER A+TLGL GQ + ++P+ SEIKP
Sbjct: 761 AMKYRNEGRDTIILAGAEYGSGSSRDWAAKGPMLLGVKAVISKSFERIHRSNLVGMGIIPLCFKAGEDAETLGLTGQELYTIELPNNVSEIKP 853 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 4 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 6 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.6g015840.1_vfh_v1 ID=Vfaba.Hedin2.R1.6g015840.1_vfh_v1; Name=Vfaba.Hedin2.R1.6g015840.1; organism=Vicia faba; type=mRNA; length=711bpback to top protein sequence of Vfaba.Hedin2.R1.6g015840.1_vfh_v1 >Vfaba.Hedin2.R1.6g015840.1_vfh_v1 ID=Vfaba.Hedin2.R1.6g015840.1_vfh_v1; Name=Vfaba.Hedin2.R1.6g015840.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=236bpback to top mRNA from alignment at chr6:127907850..127910693+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.6g015840.1_vfh_v1 ID=Vfaba.Hedin2.R1.6g015840.1_vfh_v1; Name=Vfaba.Hedin2.R1.6g015840.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr6:127907850..127910693+ (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
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