rna-XM_014638319.2
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Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_014638319.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FYF9|FB76_ARATH (F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1) HSP 1 Score: 472.626 bits (1215), Expect = 1.674e-166 Identity = 231/340 (67.94%), Postives = 273/340 (80.29%), Query Frame = 0 Query: 20 SDFFESLPDDLLLSILCKLSATASSPSDFINVLVTCKRLNSLGLHSLVLSKASHKTFSVKPQNWCDSVHRFLKHCADAGNIEASYTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVAEGRRFLLQANARELAAVLSGSSNKRPWVIPWNLPVPHPRLRFGTGTGCPLLSDYGCNVPASETHPASKFLSEWFEIRSGSL-GPGMRLCSHSGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLND----DGEEVAGEDGGGDAVMMANS 354
+D +S+PDDL++SILCKL +T+ P+DFINVL+TCKRL L ++ +VLS+ S K +VK NW + HRFLK C DAG++EA YTLGMIRFYCLQNRG+GASLMAKAA++SHAPALYSLAVIQFNGSGG+KNDKDLRAGVALCARAAFLGH+DALRELGHCLQDGYGV QNV+EGRRFL+QANARELAAVLS R + + P P G T CPLLSD+GCNVPA ETHPA++FL++WF +R G G G+RLCSH+GCGRPETR+HEFRRCSVCGVVNYCSRACQALDWK RHK +CAPV+RWL + +G +G GD V++ S
Sbjct: 41 ADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFLVQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQT-CPLLSDFGCNVPAPETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKLRHKMDCAPVQRWLEEGDGGEGNVQIDGNGNGDNVLLPMS 379
BLAST of rna-XM_014638319.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FK27|FB342_ARATH (F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1) HSP 1 Score: 405.216 bits (1040), Expect = 1.495e-140 Identity = 203/326 (62.27%), Postives = 237/326 (72.70%), Query Frame = 0 Query: 23 FESLPDDLLLSILCKLSATASSPSDFINVLVTCKRLNSLGLHSLVLSKASHKTFSVKPQNWCDSVHRFLKHCADAGNIEASYTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVAEGRRFLLQANARELAAVLSGSSNKRPWVIPWNLPVPHPRLRFGTGTGCPLLSDYGCNVPASETHPASKFLSEWFEIRSGSLGPGMRLCSHSGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERW------LNDDGEEVAGE 342
FE L DDL++SIL KL+ +ASSPSDF+ VL TCKRLN LGLH LVLSKA +T +V + W DS H+FLK C +AGNI+ASY+LGMIRFYCLQN SGASLMAKAA+ SHAPALYSL+VIQFNGSGG+K DK+LRAGVALCAR+A+LGH+DALRELGHCLQDGYGV ++V+EGRR L+QANARELA L L +G L+D VP E HP ++FL EWF L G+R+CSH GCGRPETR HEFRRCSVCG VNYCSR CQALDW+ +HK EC P++ W + DDGE VA E
Sbjct: 22 FEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRDVSEGRRLLIQANARELACSL------------------RSYLSLKSGDENETLTDLSV-VPVQEIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQALDWRAKHKVECTPLDLWVAAAAEIGDDGEAVAVE 328
BLAST of rna-XM_014638319.2 vs. Araport11
Match: AT1G67340.1 (| HCP-like superfamily protein with MYND-type zinc finger | Chr1:25230323-25231622 FORWARD LENGTH=379 | 201606) HSP 1 Score: 472.626 bits (1215), Expect = 1.713e-167 Identity = 231/340 (67.94%), Postives = 273/340 (80.29%), Query Frame = 0 Query: 20 SDFFESLPDDLLLSILCKLSATASSPSDFINVLVTCKRLNSLGLHSLVLSKASHKTFSVKPQNWCDSVHRFLKHCADAGNIEASYTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVAEGRRFLLQANARELAAVLSGSSNKRPWVIPWNLPVPHPRLRFGTGTGCPLLSDYGCNVPASETHPASKFLSEWFEIRSGSL-GPGMRLCSHSGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLND----DGEEVAGEDGGGDAVMMANS 354
+D +S+PDDL++SILCKL +T+ P+DFINVL+TCKRL L ++ +VLS+ S K +VK NW + HRFLK C DAG++EA YTLGMIRFYCLQNRG+GASLMAKAA++SHAPALYSLAVIQFNGSGG+KNDKDLRAGVALCARAAFLGH+DALRELGHCLQDGYGV QNV+EGRRFL+QANARELAAVLS R + + P P G T CPLLSD+GCNVPA ETHPA++FL++WF +R G G G+RLCSH+GCGRPETR+HEFRRCSVCGVVNYCSRACQALDWK RHK +CAPV+RWL + +G +G GD V++ S
Sbjct: 41 ADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFLVQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQT-CPLLSDFGCNVPAPETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKLRHKMDCAPVQRWLEEGDGGEGNVQIDGNGNGDNVLLPMS 379
BLAST of rna-XM_014638319.2 vs. Araport11
Match: AT5G50450.1 (| HCP-like superfamily protein with MYND-type zinc finger | Chr5:20543519-20544698 REVERSE LENGTH=336 | 201606) HSP 1 Score: 405.216 bits (1040), Expect = 1.530e-141 Identity = 203/326 (62.27%), Postives = 237/326 (72.70%), Query Frame = 0 Query: 23 FESLPDDLLLSILCKLSATASSPSDFINVLVTCKRLNSLGLHSLVLSKASHKTFSVKPQNWCDSVHRFLKHCADAGNIEASYTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVAEGRRFLLQANARELAAVLSGSSNKRPWVIPWNLPVPHPRLRFGTGTGCPLLSDYGCNVPASETHPASKFLSEWFEIRSGSLGPGMRLCSHSGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERW------LNDDGEEVAGE 342
FE L DDL++SIL KL+ +ASSPSDF+ VL TCKRLN LGLH LVLSKA +T +V + W DS H+FLK C +AGNI+ASY+LGMIRFYCLQN SGASLMAKAA+ SHAPALYSL+VIQFNGSGG+K DK+LRAGVALCAR+A+LGH+DALRELGHCLQDGYGV ++V+EGRR L+QANARELA L L +G L+D VP E HP ++FL EWF L G+R+CSH GCGRPETR HEFRRCSVCG VNYCSR CQALDW+ +HK EC P++ W + DDGE VA E
Sbjct: 22 FEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRDVSEGRRLLIQANARELACSL------------------RSYLSLKSGDENETLTDLSV-VPVQEIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQALDWRAKHKVECTPLDLWVAAAAEIGDDGEAVAVE 328
BLAST of rna-XM_014638319.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3TJ72|A0A1S3TJ72_VIGRR (F-box protein At1g67340 OS=Vigna radiata var. radiata OX=3916 GN=LOC106756064 PE=4 SV=1) HSP 1 Score: 733.406 bits (1892), Expect = 0.000e+0 Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 0 Query: 1 MSSDMPFPSKRQKTSPDKTSDFFESLPDDLLLSILCKLSATASSPSDFINVLVTCKRLNSLGLHSLVLSKASHKTFSVKPQNWCDSVHRFLKHCADAGNIEASYTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVAEGRRFLLQANARELAAVLSGSSNKRPWVIPWNLPVPHPRLRFGTGTGCPLLSDYGCNVPASETHPASKFLSEWFEIRSGSLGPGMRLCSHSGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLNDDGEEVAGEDGGGDAVMMANS 354
MSSDMPFPSKRQKTSPDKTSDFFESLPDDLLLSILCKLSATASSPSDFINVLVTCKRLNSLGLHSLVLSKASHKTFSVKPQNWCDSVHRFLKHCADAGNIEASYTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVAEGRRFLLQANARELAAVLSGSSNKRPWVIPWNLPVPHPRLRFGTGTGCPLLSDYGCNVPASETHPASKFLSEWFEIRSGSLGPGMRLCSHSGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLNDDGEEVAGEDGGGDAVMMANS
Sbjct: 1 MSSDMPFPSKRQKTSPDKTSDFFESLPDDLLLSILCKLSATASSPSDFINVLVTCKRLNSLGLHSLVLSKASHKTFSVKPQNWCDSVHRFLKHCADAGNIEASYTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVAEGRRFLLQANARELAAVLSGSSNKRPWVIPWNLPVPHPRLRFGTGTGCPLLSDYGCNVPASETHPASKFLSEWFEIRSGSLGPGMRLCSHSGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLNDDGEEVAGEDGGGDAVMMANS 354
BLAST of rna-XM_014638319.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6NKA1|A0A4D6NKA1_VIGUN (MYND-type domain-containing protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g87 PE=4 SV=1) HSP 1 Score: 702.59 bits (1812), Expect = 0.000e+0 Identity = 342/356 (96.07%), Postives = 347/356 (97.47%), Query Frame = 0 Query: 1 MSSDMPFPSKRQKTSPDKTSDFFESLPDDLLLSILCKLSATASSPSDFINVLVTCKRLNSLGLHSLVLSKASHKTFSVKPQNWCDSVHRFLKHCADAGNIEASYTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVAEGRRFLLQANARELAAVLSGSSNKRPWVIPWNLPVPHPRLRFGTGTGCPLLSDYGCNVPASETHPASKFLSEWFEIRSGSLGPGMRLCSHSGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLNDDGEEVAGED--GGGDAVMMANS 354
MSSDMPFPSKRQKTSP+KTSDFFESLPDDLLLSILCKLSATASSPSDF+NVLVTCKRLNSLGLHSLVLSKASHKTF VKPQNWCDSVHRFLKHCADAGNIEA YTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVAEGRRFLLQANARELAAVLS +SNKRPWV WNLPVPHPRLR GTG+GCPLLSDYGCNVPASETHPASKFLSEWF IRSGSLGPGMRLCSH+GCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLNDDGEEVAGED GGGDAVMMANS
Sbjct: 1 MSSDMPFPSKRQKTSPEKTSDFFESLPDDLLLSILCKLSATASSPSDFVNVLVTCKRLNSLGLHSLVLSKASHKTFLVKPQNWCDSVHRFLKHCADAGNIEACYTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVAEGRRFLLQANARELAAVLSAASNKRPWVT-WNLPVPHPRLRLGTGSGCPLLSDYGCNVPASETHPASKFLSEWFVIRSGSLGPGMRLCSHTGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLNDDGEEVAGEDGVGGGDAVMMANS 355
BLAST of rna-XM_014638319.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3S1C9|A0A0S3S1C9_PHAAN (MYND-type domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G429100 PE=4 SV=1) HSP 1 Score: 701.049 bits (1808), Expect = 0.000e+0 Identity = 342/354 (96.61%), Postives = 345/354 (97.46%), Query Frame = 0 Query: 1 MSSDMPFPSKRQKTSPDKTSDFFESLPDDLLLSILCKLSATASSPSDFINVLVTCKRLNSLGLHSLVLSKASHKTFSVKPQNWCDSVHRFLKHCADAGNIEASYTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVAEGRRFLLQANARELAAVLSGSSNKRPWVIPWNLPVPHPRLRFGTGTGCPLLSDYGCNVPASETHPASKFLSEWFEIRSGSLGPGMRLCSHSGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLNDDGEEVAGEDGGGDAVMMANS 354
M SDMPFPSKRQKTSPDKTSDFFE LPDDLLLSILCKLSATASSPSDFINVLVTCKRLNSLGLHSLVLSKASHKTFSVKPQNWCDSVHRFLKHCADAGN+EA YTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTK+DKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVAEGRRFLLQANARELAAVLSGS+NKR PWNLPVPHPRLR GTGTGCPLLSDYGCNVPASETHPASKFLSEWFEIRSGSLGPGMRLCSH GCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLNDDGEEVAGEDGGGDAVMMANS
Sbjct: 20 MFSDMPFPSKRQKTSPDKTSDFFEYLPDDLLLSILCKLSATASSPSDFINVLVTCKRLNSLGLHSLVLSKASHKTFSVKPQNWCDSVHRFLKHCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVAEGRRFLLQANARELAAVLSGSNNKR----PWNLPVPHPRLRLGTGTGCPLLSDYGCNVPASETHPASKFLSEWFEIRSGSLGPGMRLCSHWGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLNDDGEEVAGEDGGGDAVMMANS 369
BLAST of rna-XM_014638319.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9T4F2|A0A0L9T4F2_PHAAN (MYND-type domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan102s011100 PE=4 SV=1) HSP 1 Score: 701.049 bits (1808), Expect = 0.000e+0 Identity = 342/354 (96.61%), Postives = 345/354 (97.46%), Query Frame = 0 Query: 1 MSSDMPFPSKRQKTSPDKTSDFFESLPDDLLLSILCKLSATASSPSDFINVLVTCKRLNSLGLHSLVLSKASHKTFSVKPQNWCDSVHRFLKHCADAGNIEASYTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVAEGRRFLLQANARELAAVLSGSSNKRPWVIPWNLPVPHPRLRFGTGTGCPLLSDYGCNVPASETHPASKFLSEWFEIRSGSLGPGMRLCSHSGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLNDDGEEVAGEDGGGDAVMMANS 354
M SDMPFPSKRQKTSPDKTSDFFE LPDDLLLSILCKLSATASSPSDFINVLVTCKRLNSLGLHSLVLSKASHKTFSVKPQNWCDSVHRFLKHCADAGN+EA YTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTK+DKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVAEGRRFLLQANARELAAVLSGS+NKR PWNLPVPHPRLR GTGTGCPLLSDYGCNVPASETHPASKFLSEWFEIRSGSLGPGMRLCSH GCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLNDDGEEVAGEDGGGDAVMMANS
Sbjct: 1 MFSDMPFPSKRQKTSPDKTSDFFEYLPDDLLLSILCKLSATASSPSDFINVLVTCKRLNSLGLHSLVLSKASHKTFSVKPQNWCDSVHRFLKHCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVAEGRRFLLQANARELAAVLSGSNNKR----PWNLPVPHPRLRLGTGTGCPLLSDYGCNVPASETHPASKFLSEWFEIRSGSLGPGMRLCSHWGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLNDDGEEVAGEDGGGDAVMMANS 350
BLAST of rna-XM_014638319.2 vs. UniProtKB/TrEMBL
Match: tr|V7D028|V7D028_PHAVU (MYND-type domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G2619001g PE=4 SV=1) HSP 1 Score: 669.848 bits (1727), Expect = 0.000e+0 Identity = 328/351 (93.45%), Postives = 335/351 (95.44%), Query Frame = 0 Query: 5 MPFPSKRQKTSPDKTSDFFESLPDDLLLSILCKLSATASSPSDFINVLVTCKRLNSLGLHSLVLSKASHKTFSVKPQNWCDSVHRFLKHCADAGNIEASYTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVAEGRRFLLQANARELAAVLSGSSNKRPWVIPWNLPVPHPRLRFGTGTGCPLLSDYGCNVPASETHPASKFLSEWFEIRSGSLGPGMRLCSHSGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLNDDGEEV-AGEDGGGDAVMMANS 354
MPF SKR+KT P+KTSDFFESLPDDLLLSILCKLSATASSPSDFINVLVTCKRLNSLGLHSLVLSKASHKTF VKPQNWCDSVHRFLKHCADAGNIEA YTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGH+DALRELGHCLQDGYGVKQNVAEGRRFLLQANARELAAVLS NKRPWV WNLPVPHPRLR GTG+GCPLLSDYGCNVPASETHPASKFLSEWF IRSGSLG GMRLCSHSGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLNDDGE+V AGE+G GD +MANS
Sbjct: 1 MPFTSKRRKTCPEKTSDFFESLPDDLLLSILCKLSATASSPSDFINVLVTCKRLNSLGLHSLVLSKASHKTFLVKPQNWCDSVHRFLKHCADAGNIEACYTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVKQNVAEGRRFLLQANARELAAVLSTVGNKRPWVT-WNLPVPHPRLRLGTGSGCPLLSDYGCNVPASETHPASKFLSEWFVIRSGSLGSGMRLCSHSGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLNDDGEDVAAGENGDGDDEIMANS 350
BLAST of rna-XM_014638319.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445HIC0|A0A445HIC0_GLYSO (F-box protein isoform A OS=Glycine soja OX=3848 GN=D0Y65_037167 PE=4 SV=1) HSP 1 Score: 621.313 bits (1601), Expect = 0.000e+0 Identity = 299/346 (86.42%), Postives = 320/346 (92.49%), Query Frame = 0 Query: 10 KRQKTSPDKTSDFFESLPDDLLLSILCKLSATASSPSDFINVLVTCKRLNSLGLHSLVLSKASHKTFSVKPQNWCDSVHRFLKHCADAGNIEASYTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVAEGRRFLLQANARELAAVLSGSSNKRPWVIPWNLPVPHPRLRFGTGTGCPLLSDYGCNVPASETHPASKFLSEWFEIRSGSLGPGMRLCSHSGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLNDDGEEVAGE-DGGGDAVMMANS 354
KRQKTSPDKTSD F+SLPDDL+LSILCKLS+TA+SPSDFI+VL+TCKRLNSLGLHSLVLSKASHKTFSVK +NWCDS+HRFLKHCADAGNIEA YTLG+IRFYCLQNRGSGA+LMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNV EGRRFL+QAN RELAAVLS +NKRPW+ + PVPHPRLR TG+GCPLLSDYGCNVPA E HPAS+F+SEWF+IR G GMRLCS SGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWL+DD E+VAGE DGG D VMM +S
Sbjct: 17 KRQKTSPDKTSDCFDSLPDDLVLSILCKLSSTATSPSDFISVLITCKRLNSLGLHSLVLSKASHKTFSVKAKNWCDSLHRFLKHCADAGNIEACYTLGLIRFYCLQNRGSGAALMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVTEGRRFLVQANVRELAAVLSAGNNKRPWLTWSHQPVPHPRLRSETGSGCPLLSDYGCNVPAPEVHPASQFMSEWFDIRGGFPSAGMRLCSQSGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLDDDDEDVAGENDGGDDGVMMVDS 362
BLAST of rna-XM_014638319.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0R0HLZ8|A0A0R0HLZ8_SOYBN (MYND-type domain-containing protein OS=Glycine max OX=3847 GN=100798136 PE=4 SV=1) HSP 1 Score: 620.157 bits (1598), Expect = 0.000e+0 Identity = 299/346 (86.42%), Postives = 320/346 (92.49%), Query Frame = 0 Query: 10 KRQKTSPDKTSDFFESLPDDLLLSILCKLSATASSPSDFINVLVTCKRLNSLGLHSLVLSKASHKTFSVKPQNWCDSVHRFLKHCADAGNIEASYTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVAEGRRFLLQANARELAAVLSGSSNKRPWVIPWNLPVPHPRLRFGTGTGCPLLSDYGCNVPASETHPASKFLSEWFEIRSGSLGPGMRLCSHSGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLNDDGEEVAGE-DGGGDAVMMANS 354
KRQKTSPDKTSD F+SLPDDL+LSILCKLS+TA+SPSDFI+VL+TCKRLNSLGLHSLVLSKASHKTFSVK +NWCDS+HRFLKHCADAGNIEA YTLG+IRFYCLQNRGSGA+LMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNV EGRRFL+QAN RELAAVLS +NKRPW+ + PVPHPRLR TG+GCPLLSDYGCNVPA E HPAS+F+SEWF+IR G GMRLCS SGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWL+DD E+VAGE DGG D VMM +S
Sbjct: 17 KRQKTSPDKTSDCFDSLPDDLVLSILCKLSSTATSPSDFISVLITCKRLNSLGLHSLVLSKASHKTFSVKAKNWCDSLHRFLKHCADAGNIEACYTLGLIRFYCLQNRGSGAALMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVTEGRRFLVQANVRELAAVLSAGNNKRPWLTWSHQPVPHPRLRSETGSGCPLLSDYGCNVPAPEVHPASQFMSEWFDIRGGFPSAGMRLCSQSGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLDDDDEDVAGENDGGDDGVMMVDS 362
BLAST of rna-XM_014638319.2 vs. UniProtKB/TrEMBL
Match: tr|A0A371I9Y1|A0A371I9Y1_MUCPR (F-box protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_03426 PE=4 SV=1) HSP 1 Score: 607.06 bits (1564), Expect = 0.000e+0 Identity = 297/358 (82.96%), Postives = 325/358 (90.78%), Query Frame = 0 Query: 1 MSSDMPFPS-KRQKTSPDKTSDFFESLPDDLLLSILCKLSATASSPSDFINVLVTCKRLNSLGLHSLVLSKASHKTFSVKPQNWCDSVHRFLKHCADAGNIEASYTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVAEGRRFLLQANARELAAVLSGSSNKRPWVIPWNLPVPHPRLRFGTGTGCPLLSDYGCNVPASETHPASKFLSEWFEIRSGSLGPGMRLCSHSGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLNDDGEEVAGEDGG---GDAVMMANS 354
MSSD+ S KRQK SPDKT++FF+SLPDDL+LSILCKLS+TA+SPSDFI++L+TCKRLNSLGLHSLVLSKASHKTFSVK +NWCDS HRFLK CADAGN+EA YTLGMIRFYCLQNRGSGASLMAKAAM+SHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGV+QNV EGRRFL+QANARELAAVLS ++ KRPW+ W++ HPRLR GTG+GCPLLSDYGCNVPA E HPAS+F++EWF R GS GPGMRLCSHSGCGRPETR+HEFRRCSVCG VNYCSRACQALDWKFRHKAECAPVERWL+DDGE+ A ED G GD VMM +S
Sbjct: 17 MSSDIYNVSRKRQKKSPDKTANFFDSLPDDLVLSILCKLSSTATSPSDFISLLITCKRLNSLGLHSLVLSKASHKTFSVKAKNWCDSAHRFLKLCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAMSSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVTEGRRFLVQANARELAAVLSAANGKRPWMT-WSV---HPRLRSGTGSGCPLLSDYGCNVPAPEAHPASRFMAEWFAGRGGSSGPGMRLCSHSGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKAECAPVERWLDDDGEDAAVEDDGGRVGDGVMMVDS 370
BLAST of rna-XM_014638319.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445HI89|A0A445HI89_GLYSO (F-box protein isoform B OS=Glycine soja OX=3848 GN=D0Y65_037167 PE=4 SV=1) HSP 1 Score: 606.675 bits (1563), Expect = 0.000e+0 Identity = 299/375 (79.73%), Postives = 320/375 (85.33%), Query Frame = 0 Query: 10 KRQKTSPDKTSDFFESLPDDLLLSILCKLSATASSPSDFINVLVT-----------------------------CKRLNSLGLHSLVLSKASHKTFSVKPQNWCDSVHRFLKHCADAGNIEASYTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVAEGRRFLLQANARELAAVLSGSSNKRPWVIPWNLPVPHPRLRFGTGTGCPLLSDYGCNVPASETHPASKFLSEWFEIRSGSLGPGMRLCSHSGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLNDDGEEVAGE-DGGGDAVMMANS 354
KRQKTSPDKTSD F+SLPDDL+LSILCKLS+TA+SPSDFI+VL+T CKRLNSLGLHSLVLSKASHKTFSVK +NWCDS+HRFLKHCADAGNIEA YTLG+IRFYCLQNRGSGA+LMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNV EGRRFL+QAN RELAAVLS +NKRPW+ + PVPHPRLR TG+GCPLLSDYGCNVPA E HPAS+F+SEWF+IR G GMRLCS SGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWL+DD E+VAGE DGG D VMM +S
Sbjct: 17 KRQKTSPDKTSDCFDSLPDDLVLSILCKLSSTATSPSDFISVLITYARTFLNLLKKIKLKKNSFFLIDLLKLNRCKRLNSLGLHSLVLSKASHKTFSVKAKNWCDSLHRFLKHCADAGNIEACYTLGLIRFYCLQNRGSGAALMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVTEGRRFLVQANVRELAAVLSAGNNKRPWLTWSHQPVPHPRLRSETGSGCPLLSDYGCNVPAPEVHPASQFMSEWFDIRGGFPSAGMRLCSQSGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLDDDDEDVAGENDGGDDGVMMVDS 391
BLAST of rna-XM_014638319.2 vs. UniProtKB/TrEMBL
Match: tr|I1MYF3|I1MYF3_SOYBN (MYND-type domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_18G006600 PE=4 SV=1) HSP 1 Score: 597.43 bits (1539), Expect = 0.000e+0 Identity = 297/348 (85.34%), Postives = 318/348 (91.38%), Query Frame = 0 Query: 10 KRQKTSPDKTSD-FFESLPDDLLLSILCKLSATASSPSDFINVLVTCKRLNSLGLHSLVLSKASHKTFSVKPQNWCDSVHRFLKHCADAGNIEASYTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVAEGRRFLLQANARELAAVLSGSSNKRPWVIPWNLPVPHPRLRFGTGTGCPLLSDYGCNVPASETHPASKFLSEWFEIRSGSLGPGMRLCSHSGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLNDDGEEVAGED--GGGDAVMMANS 354
KRQKTSPDKTSD FF+SLPDDL+LSILCKLS+TA+SPSDFI+VL+TCKRLNSLGLHSLVLSKASHKTFSVK +NWCDS+HRFLKHCADAGNIEA YTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVK NV EGRRFL+QANARELAAVLS + KRPW+ + PV HPRLR +GCPL+SDYGCNVPA + HPAS+F+SEWF+IR G GP MRLCSHSGCGRPETRRHEFRRCSVCG+VNYCSRACQALDWKFRHKAECA VERWL+DDGE VAGE+ GG D VMM NS
Sbjct: 5 KRQKTSPDKTSDDFFDSLPDDLVLSILCKLSSTATSPSDFISVLITCKRLNSLGLHSLVLSKASHKTFSVKAKNWCDSLHRFLKHCADAGNIEACYTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKLNVTEGRRFLVQANARELAAVLSAGNTKRPWLTWSHHPVTHPRLR----SGCPLMSDYGCNVPAPDAHPASQFMSEWFDIRGGFPGPDMRLCSHSGCGRPETRRHEFRRCSVCGLVNYCSRACQALDWKFRHKAECATVERWLDDDGEGVAGENDGGGDDGVMMVNS 348 The following BLAST results are available for this feature:
BLAST of rna-XM_014638319.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot) Total hits: 2 Position : 0 Zoom : x 1
BLAST of rna-XM_014638319.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11) Total hits: 2 Position : 0 Zoom : x 1
BLAST of rna-XM_014638319.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_014638319.2_VrVC1973A-SNU_v1 ID=rna-XM_014638319.2_VrVC1973A-SNU_v1; Name=rna-XM_014638319.2; organism=Vigna radiata; type=mRNA; length=1065bpback to top protein sequence of rna-XM_014638319.2_VrVC1973A-SNU_v1 >rna-XM_014638319.2_VrVC1973A-SNU_v1 ID=rna-XM_014638319.2_VrVC1973A-SNU_v1; Name=rna-XM_014638319.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=354bpback to top mRNA from alignment at chr02:22189059..22190551+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_014638319.2_VrVC1973A-SNU_v1 ID=rna-XM_014638319.2_VrVC1973A-SNU_v1; Name=rna-XM_014638319.2; organism=Vigna radiata; type=mRNA; length=1493bp; location=Sequence derived from: chr02:22189059..22190551+ (Vigna radiataback to top Coding sequence (CDS) from alignment at chr02:22189059..22190551+ >rna-XM_014638319.2_VrVC1973A-SNU_v1 ID=rna-XM_014638319.2_VrVC1973A-SNU_v1; Name=rna-XM_014638319.2; organism=Vigna radiata; type=CDS; length=1065bp; location=Sequence derived from: chr02:22189059..22190551+ (Vigna radiataback to top |