rna-XM_014638176.2

Transcript Overview
Namerna-XM_014638176.2
Unique Namerna-XM_014638176.2_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length390
ProductEPIDERMAL PATTERNING FACTOR-like protein 1
References
External references for this mRNA
DatabaseAccession
GeneID106755944
GenbankXM_014638176.2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr02chromosomechr02:22763663..22765257 +Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
asvrvL031Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0021Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0024Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0219Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0311Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0351Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvrvL400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0692Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivrvL482Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivrvL640Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavrvL398Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavrvL516Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvrvL0014Cajanus cajan Asha genome v1.0Cajanus cajan
ccvrvL0956Cajanus cajan Asha genome v1.0Cajanus cajan
pvvrvL019Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvrvL378Pisum sativum Cameor genome v1aPisum sativum
pvvrvL218Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvrvL652Pisum sativum Cameor genome v1aPisum sativum
tifvrvL219Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL639Vicia faba cv. Tiffany genome v1.0Vicia faba
vrvvrvR117Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvL230Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvssR260Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR278Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvrvL651Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuR193Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuaR175Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvzwsR204Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuaR193Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuR214Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvzwsR236Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvrvL373Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL487Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvrvL194Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL341Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvrvL369Cicer arietinum
carvrvL489Cicer arietinum
ccavrvL026Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL710Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vrvvumR193Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR218Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvvaR237Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR241Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR260Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvstR184Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR206Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvrvL038Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL346Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvrvL015Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL205Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vrvvunR187Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR207Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
XM_058879769.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigst.04G282000.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
jg53695.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Phvul.002G257600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigan.04G419900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Psat07G0149400-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigan.01G088300.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Ca_15984.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Psat05G0272500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vfaba.Hedin2.R1.2g116840.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Phvul.001G253101.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigst.01G069400.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
PvulFLAVERTChr02.1001496Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-TanjilR_22321Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-KK1_029014Cajanus cajan Asha genome v1.0Cajanus cajan
Vum_04G03145.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vum_01G00759.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vfaba.Tiffany.R1.6g111800.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Ca_09550Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-XM_004502356.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Ca_12709Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
jg28558.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Cc_v2.0_22375.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-KK1_019984Cajanus cajan Asha genome v1.0Cajanus cajan
Psat5g090560.1Pisum sativum Cameor genome v1aPisum sativum
Vigun03g077900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vfaba.Tiffany.R1.2g095480.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigun03g077900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
XM_058931018.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigun01g237550.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
rna-TanjilR_05752Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
LR48_mrnaVigan01g028300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
XM_058931002.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
rna-XM_004504040.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
LR48_mrnaVigan03g307400Vigna angularis Jingnong 6 genome v1.1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_014652649.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106755944gene-LOC106755944_VrVC1973A-SNU_v1Vigna radiatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_014638176.2-1exon-XM_014638176.2-1_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014638176.2-2exon-XM_014638176.2-2_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_014493662.1cds-XP_014493662.1_VrVC1973A-SNU_v1Vigna radiataCDS
cds-XP_014493662.1cds-XP_014493662.1_VrVC1973A-SNU_v1_2Vigna radiataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_014638176.2_VrVC1973A-SNU_v1rna-XM_014638176.2_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_014638176.2_VrVC1973A-SNU_v1rna-XM_014638176.2_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


Homology
[Close]
BLAST of rna-XM_014638176.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LFT5|EPFL1_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.278e-25
Identity = 54/104 (51.92%), Postives = 68/104 (65.38%), Query Frame = 0 
Query:   34 VSCFVQPHHAIPPEDP--SSYEEKNRLGSMPPTCHNKCNQCHPCMAVQVPSLPSHN---RVHP---AGISPSSAMQGFLLQGNSYSNYKPMSWKCRCGDHFFNP 129
            VS F+QP    PP  P  +  E+K RLGS PP+CHN+CN CHPCMA+QVP+LP+ +   RV+P     + P S++   L Q   YSNYKPM WKC C  HF+NP
Sbjct:   24 VSSFLQPIQ--PPISPQVALIEDKARLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQ---YSNYKPMGWKCHCNGHFYNP 122
[Close]
BLAST of rna-XM_014638176.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9T068|EPFL2_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EPFL2 PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 1.224e-10
Identity = 32/76 (42.11%), Postives = 44/76 (57.89%), Query Frame = 0 
Query:   58 LGSMPPTCHN-KCNQCHPCMAVQVPSLPSHNRVHPAGISPSSAMQGFLL---QGNSYSNYKPMSWKCRCGDHFFNP 129
            +GS PP C   +C  C  C A+QVP+ P      P   S SS+ +   L   +G+  +NYKPMSWKC+CG+  +NP
Sbjct:   53 IGSRPPRCERVRCRSCGHCEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGNSIYNP 128
[Close]
BLAST of rna-XM_014638176.2 vs. Araport11
Match: AT5G10310.1 (| EPIDERMAL PATTERNING FACTOR-like protein | Chr5:3241666-3242127 REVERSE LENGTH=122 | 201606)

HSP 1 Score: 96.2857 bits (238), Expect = 1.307e-26
Identity = 54/104 (51.92%), Postives = 68/104 (65.38%), Query Frame = 0 
Query:   34 VSCFVQPHHAIPPEDP--SSYEEKNRLGSMPPTCHNKCNQCHPCMAVQVPSLPSHN---RVHP---AGISPSSAMQGFLLQGNSYSNYKPMSWKCRCGDHFFNP 129
            VS F+QP    PP  P  +  E+K RLGS PP+CHN+CN CHPCMA+QVP+LP+ +   RV+P     + P S++   L Q   YSNYKPM WKC C  HF+NP
Sbjct:   24 VSSFLQPIQ--PPISPQVALIEDKARLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQ---YSNYKPMGWKCHCNGHFYNP 122
[Close]
BLAST of rna-XM_014638176.2 vs. Araport11
Match: AT5G10310.2 (| EPIDERMAL PATTERNING FACTOR-like protein | Chr5:3241666-3242127 REVERSE LENGTH=128 | 201606)

HSP 1 Score: 95.9005 bits (237), Expect = 2.572e-26
Identity = 54/110 (49.09%), Postives = 68/110 (61.82%), Query Frame = 0 
Query:   34 VSCFVQPHHAIPPEDPSSY--------EEKNRLGSMPPTCHNKCNQCHPCMAVQVPSLPSHN---RVHP---AGISPSSAMQGFLLQGNSYSNYKPMSWKCRCGDHFFNP 129
            VS F+QP    PP  P  +        E+K RLGS PP+CHN+CN CHPCMA+QVP+LP+ +   RV+P     + P S++   L Q   YSNYKPM WKC C  HF+NP
Sbjct:   24 VSSFLQPIQ--PPISPQFFALFQVALIEDKARLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQ---YSNYKPMGWKCHCNGHFYNP 128
[Close]
BLAST of rna-XM_014638176.2 vs. Araport11
Match: AT4G37810.1 (| EPIDERMAL PATTERNING FACTOR-like protein | Chr4:17780970-17781544 FORWARD LENGTH=128 | 201606)

HSP 1 Score: 58.151 bits (139), Expect = 1.252e-11
Identity = 32/76 (42.11%), Postives = 44/76 (57.89%), Query Frame = 0 
Query:   58 LGSMPPTCHN-KCNQCHPCMAVQVPSLPSHNRVHPAGISPSSAMQGFLL---QGNSYSNYKPMSWKCRCGDHFFNP 129
            +GS PP C   +C  C  C A+QVP+ P      P   S SS+ +   L   +G+  +NYKPMSWKC+CG+  +NP
Sbjct:   53 IGSRPPRCERVRCRSCGHCEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGNSIYNP 128
[Close]
BLAST of rna-XM_014638176.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3TIS5|A0A1S3TIS5_VIGRR (Epidermal patterning factor-like protein OS=Vigna radiata var. radiata OX=3916 GN=LOC106755944 PE=3 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 5.477e-90
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0 
Query:    1 MIMASLNPIQNSTTIILLVAIFITFLLHHLLCPVSCFVQPHHAIPPEDPSSYEEKNRLGSMPPTCHNKCNQCHPCMAVQVPSLPSHNRVHPAGISPSSAMQGFLLQGNSYSNYKPMSWKCRCGDHFFNP 129
            MIMASLNPIQNSTTIILLVAIFITFLLHHLLCPVSCFVQPHHAIPPEDPSSYEEKNRLGSMPPTCHNKCNQCHPCMAVQVPSLPSHNRVHPAGISPSSAMQGFLLQGNSYSNYKPMSWKCRCGDHFFNP
Sbjct:    1 MIMASLNPIQNSTTIILLVAIFITFLLHHLLCPVSCFVQPHHAIPPEDPSSYEEKNRLGSMPPTCHNKCNQCHPCMAVQVPSLPSHNRVHPAGISPSSAMQGFLLQGNSYSNYKPMSWKCRCGDHFFNP 129
[Close]
BLAST of rna-XM_014638176.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9UAV6|A0A0L9UAV6_PHAAN (Epidermal patterning factor-like protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan03g307400 PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.578e-79
Identity = 117/129 (90.70%), Postives = 121/129 (93.80%), Query Frame = 0 
Query:    1 MIMASLNPIQNSTTIILLVAIFITFLLHHLLCPVSCFVQPHHAIPPEDPSSYEEKNRLGSMPPTCHNKCNQCHPCMAVQVPSLPSHNRVHPAGISPSSAMQGFLLQGNSYSNYKPMSWKCRCGDHFFNP 129
            MIMAS NPIQNSTT IL VAI ITFLLHHLLCPVSCF+ PHHAIPP+DPS YEEKNRLGSMPP+CHNKCNQCHPCMAVQVPSLP+HNRVHPAGISPSS MQGFLLQGNSYSNYKPMSWKC CGDHFFNP
Sbjct:    1 MIMASFNPIQNSTTTILPVAIIITFLLHHLLCPVSCFMLPHHAIPPKDPS-YEEKNRLGSMPPSCHNKCNQCHPCMAVQVPSLPTHNRVHPAGISPSSQMQGFLLQGNSYSNYKPMSWKCSCGDHFFNP 128
[Close]
BLAST of rna-XM_014638176.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445FMP9|A0A445FMP9_GLYSO (Epidermal patterning factor-like protein OS=Glycine soja OX=3848 GN=D0Y65_047220 PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 9.064e-67
Identity = 102/129 (79.07%), Postives = 111/129 (86.05%), Query Frame = 0 
Query:    1 MIMASLNPIQNSTTIILLVAIFITFLLHHLLCPVSCFVQPHHAIPPEDPSSYEEKNRLGSMPPTCHNKCNQCHPCMAVQVPSLPSHNRVHPAGISPSSAMQGFLLQGNSYSNYKPMSWKCRCGDHFFNP 129
            MIMAS N IQNSTT ILL+ I ITFLLHHLLCPVSCF QP HAIPP DP   EEKNRLGSMPPTCHNKCN+CHPCMAVQVP+ PSH RVHP G++P++AM+ F LQGN YSNYKP+SWKC CGDHFFNP
Sbjct:    1 MIMASFNSIQNSTTPILLITILITFLLHHLLCPVSCFNQPQHAIPPPDPLC-EEKNRLGSMPPTCHNKCNRCHPCMAVQVPASPSHERVHP-GLAPTAAMEVFFLQGNRYSNYKPLSWKCHCGDHFFNP 127
[Close]
BLAST of rna-XM_014638176.2 vs. UniProtKB/TrEMBL
Match: tr|I1MYQ7|I1MYQ7_SOYBN (Epidermal patterning factor-like protein OS=Glycine max OX=3847 GN=102664041 PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 9.064e-67
Identity = 102/129 (79.07%), Postives = 111/129 (86.05%), Query Frame = 0 
Query:    1 MIMASLNPIQNSTTIILLVAIFITFLLHHLLCPVSCFVQPHHAIPPEDPSSYEEKNRLGSMPPTCHNKCNQCHPCMAVQVPSLPSHNRVHPAGISPSSAMQGFLLQGNSYSNYKPMSWKCRCGDHFFNP 129
            MIMAS N IQNSTT ILL+ I ITFLLHHLLCPVSCF QP HAIPP DP   EEKNRLGSMPPTCHNKCN+CHPCMAVQVP+ PSH RVHP G++P++AM+ F LQGN YSNYKP+SWKC CGDHFFNP
Sbjct:    1 MIMASFNSIQNSTTPILLITILITFLLHHLLCPVSCFNQPQHAIPPPDPLC-EEKNRLGSMPPTCHNKCNRCHPCMAVQVPASPSHERVHP-GLAPTAAMEVFFLQGNRYSNYKPLSWKCHCGDHFFNP 127
[Close]
BLAST of rna-XM_014638176.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MCV2|A0A4D6MCV2_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g3365 PE=4 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.113e-66
Identity = 110/130 (84.62%), Postives = 113/130 (86.92%), Query Frame = 0 
Query:    1 MIMASLNPIQNSTTIILLVA-IFITFLLHHLLCPVSCFVQPHHAIPPEDPSSYEEKNRLGSMPPTCHNKCNQCHPCMAVQVPSLPSHNRVHPAGISPSSAMQGFLLQGNSYSNYKPMSWKCRCGDHFFNP 129
            MIMASLNPIQN TT ILLVA I ITFLL   LCPVSCF+QP       DPS YEEKNRLGSMPPTCHNKCNQCHPCMAVQVPS+PSHNRVHP  ISPSSAMQGFLLQGNSYSNYKPMSWKCRCGDHF+NP
Sbjct:  418 MIMASLNPIQNPTTTILLVATIIITFLLQ--LCPVSCFMQPQM-----DPS-YEEKNRLGSMPPTCHNKCNQCHPCMAVQVPSIPSHNRVHPVAISPSSAMQGFLLQGNSYSNYKPMSWKCRCGDHFYNP 539
[Close]
BLAST of rna-XM_014638176.2 vs. UniProtKB/TrEMBL
Match: tr|V7D2D2|V7D2D2_PHAVU (Epidermal patterning factor-like protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G253100g PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 8.228e-61
Identity = 106/129 (82.17%), Postives = 112/129 (86.82%), Query Frame = 0 
Query:    1 MIMASLNPIQNSTTIILLVAIFITFLLHHLLCPVSCFVQPHHAIPPEDPSSYEEKNRLGSMPPTCHNKCNQCHPCMAVQVPSLPSHNRVHPAGISPSSAMQGFLLQGNSYSNYKPMSWKCRCGDHFFNP 129
            MIM+SLN IQNSTT ILL+ I ITFLLHHLLCPVSCF+ P HAIPP DPS YEEKNRLGSMPPTCHNKCNQCHPCMAVQVPSL  +NRVHP  ISPS+AMQ F LQGN YSNYKP+SWKC CGD FFNP
Sbjct:    1 MIMSSLNLIQNSTTTILLITIIITFLLHHLLCPVSCFIPPQHAIPPRDPS-YEEKNRLGSMPPTCHNKCNQCHPCMAVQVPSLSRNNRVHPVSISPSAAMQSFFLQGNRYSNYKPLSWKCHCGDQFFNP 128
[Close]
BLAST of rna-XM_014638176.2 vs. UniProtKB/TrEMBL
Match: tr|A0A371FR97|A0A371FR97_MUCPR (Epidermal patterning factor-like protein (Fragment) OS=Mucuna pruriens OX=157652 GN=EPFL1 PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.728e-55
Identity = 99/129 (76.74%), Postives = 110/129 (85.27%), Query Frame = 0 
Query:    3 MASLNPIQNSTTIILLVAIFIT-FLLHHLLCPVSCFVQPHHAIPPEDPSSYEEKNRLGSMPPTCHNKCNQCHPCMAVQVPSLPSHNRVHPAGISPSSAMQGFLLQ-GNSYSNYKPMSWKCRCGDHFFNP 129
            MASLN IQNSTT ILL+ + I  FL HHLLCPVSCF QP HA PP DP   EEKNRLGS+PPTCHNKCNQCHPCMAVQVP+LPSH+R+HP G++P+SAM+GF LQ  NSYSNYKP+SWKC CGDHFFNP
Sbjct:    1 MASLNSIQNSTTTILLIIVIIITFLQHHLLCPVSCFNQPQHATPPPDPLC-EEKNRLGSIPPTCHNKCNQCHPCMAVQVPTLPSHDRLHP-GLAPTSAMEGFFLQSNNSYSNYKPLSWKCHCGDHFFNP 127
[Close]
BLAST of rna-XM_014638176.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445HI16|A0A445HI16_GLYSO (Epidermal patterning factor-like protein OS=Glycine soja OX=3848 GN=D0Y65_037078 PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.782e-54
Identity = 100/131 (76.34%), Postives = 111/131 (84.73%), Query Frame = 0 
Query:    1 MIMASLNPIQNSTTIILLVAIFITFLLHHLLCPVSCFVQPHHAIPPEDPSSYEEKNRLGSMPPTCHNKCNQCHPCMAVQVPSLPSHNRVHPAGISPSSAMQGFLLQGNS--YSNYKPMSWKCRCGDHFFNP 129
            MIMASLN IQNSTT ILL+ I ITFLLHHLLCPVSCF QP HAIPP DP   EE+NRLGSMPPTCHNKCNQCHPCMAVQVP+ P+H RVHP  + P+++M+ F LQGN+  YSNYKP+SWKC CGDHFFNP
Sbjct:    1 MIMASLNSIQNSTTTILLLIILITFLLHHLLCPVSCFNQPQHAIPPPDPLC-EEQNRLGSMPPTCHNKCNQCHPCMAVQVPTSPNHERVHPGLLPPTASMEVFFLQGNTNRYSNYKPLSWKCHCGDHFFNP 130
[Close]
BLAST of rna-XM_014638176.2 vs. UniProtKB/TrEMBL
Match: tr|I3SW38|I3SW38_LOTJA (Epidermal patterning factor-like protein OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 7.187e-54
Identity = 86/128 (67.19%), Postives = 99/128 (77.34%), Query Frame = 0 
Query:    3 MASLNPIQNSTTIILLVAIFITFLLHHLLCPVSCFVQPHHAIPPEDPSSYEEKNRLGSMPPTCHNKCNQCHPCMAVQVPSLPSHNRVHPAGISPSSAMQGFLLQGNS-YSNYKPMSWKCRCGDHFFNP 129
            MASLN  QNST  I+ + + + FLLHHLLCPVSC  QP  AIPP D    +EKNRLGSMPPTCHNKCNQCHPCMAVQVP+LPSH+RV   G+   ++M+G  LQ N+ YSNYKP+SWKC CG HFFNP
Sbjct:    1 MASLNSYQNSTNTIITILLVMVFLLHHLLCPVSCINQPQPAIPPRD-QFLDEKNRLGSMPPTCHNKCNQCHPCMAVQVPNLPSHDRVVGPGVPRIASMEGLFLQANNRYSNYKPLSWKCHCGGHFFNP 127
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BLAST of rna-XM_014638176.2 vs. UniProtKB/TrEMBL
Match: tr|A0A151U931|A0A151U931_CAJCA (Epidermal patterning factor-like protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_019984 PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 2.914e-53
Identity = 89/129 (68.99%), Postives = 98/129 (75.97%), Query Frame = 0 
Query:    1 MIMASLNPIQNSTTIILLVAIFITFLLHHLLCPVSCFVQPHHAIPPEDPSSYEEKNRLGSMPPTCHNKCNQCHPCMAVQVPSLPSHNRVHPAGISPSSAMQGFLLQGNSYSNYKPMSWKCRCGDHFFNP 129
             IMASLN IQNSTT+ +L+ I ITFLLHH+LCPVSCF QP HA  P       +KNR+GS PPTCHNKCNQCHPCMAVQVPS+ SHNRV P       A + F LQGN YSNYKP+SWKC CGDHFFNP
Sbjct:    1 FIMASLNSIQNSTTLTILLIIVITFLLHHVLCPVSCFNQPQHAPEPL----CAKKNRIGSSPPTCHNKCNQCHPCMAVQVPSVRSHNRVQPC-----RAPKKFSLQGNRYSNYKPLSWKCHCGDHFFNP 120
The following BLAST results are available for this feature:
BLAST of rna-XM_014638176.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
sp|Q9LFT5|EPFL1_ARATH1.278e-2551.92EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arab... [more]
sp|Q9T068|EPFL2_ARATH1.224e-1042.11EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arab... [more]
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BLAST of rna-XM_014638176.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G10310.11.307e-2651.92| EPIDERMAL PATTERNING FACTOR-like protein | Chr5:... [more]
AT5G10310.22.572e-2649.09| EPIDERMAL PATTERNING FACTOR-like protein | Chr5:... [more]
AT4G37810.11.252e-1142.11| EPIDERMAL PATTERNING FACTOR-like protein | Chr4:... [more]
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BLAST of rna-XM_014638176.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3TIS5|A0A1S3TIS5_VIGRR5.477e-90100.00Epidermal patterning factor-like protein OS=Vigna ... [more]
tr|A0A0L9UAV6|A0A0L9UAV6_PHAAN2.578e-7990.70Epidermal patterning factor-like protein OS=Phaseo... [more]
tr|A0A445FMP9|A0A445FMP9_GLYSO9.064e-6779.07Epidermal patterning factor-like protein OS=Glycin... [more]
tr|I1MYQ7|I1MYQ7_SOYBN9.064e-6779.07Epidermal patterning factor-like protein OS=Glycin... [more]
tr|A0A4D6MCV2|A0A4D6MCV2_VIGUN2.113e-6684.62Uncharacterized protein OS=Vigna unguiculata OX=39... [more]
tr|V7D2D2|V7D2D2_PHAVU8.228e-6182.17Epidermal patterning factor-like protein OS=Phaseo... [more]
tr|A0A371FR97|A0A371FR97_MUCPR3.728e-5576.74Epidermal patterning factor-like protein (Fragment... [more]
tr|A0A445HI16|A0A445HI16_GLYSO1.782e-5476.34Epidermal patterning factor-like protein OS=Glycin... [more]
tr|I3SW38|I3SW38_LOTJA7.187e-5467.19Epidermal patterning factor-like protein OS=Lotus ... [more]
tr|A0A151U931|A0A151U931_CAJCA2.914e-5368.99Epidermal patterning factor-like protein (Fragment... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF17181EPFcoord: 57..129
e-value: 6.3E-22
score: 77.3
IPR039455EPIDERMAL PATTERNING FACTOR-like proteinPANTHERPTHR33109EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4coord: 20..129

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_014638176.2_VrVC1973A-SNU_v1 ID=rna-XM_014638176.2_VrVC1973A-SNU_v1; Name=rna-XM_014638176.2; organism=Vigna radiata; type=mRNA; length=390bp
ATGATCATGGCTTCACTCAATCCAATTCAGAACTCCACCACCATTATCTT
GCTTGTTGCAATATTTATTACATTTCTACTGCACCATCTGCTGTGTCCAG
TTTCTTGTTTCGTGCAACCACATCATGCAATTCCTCCAGAGGACCCTTCT
TCGTATGAGGAGAAAAACAGATTAGGTTCAATGCCTCCTACTTGCCACAA
CAAATGCAACCAGTGTCATCCATGCATGGCAGTGCAAGTTCCATCTTTAC
CTAGTCACAACCGAGTCCACCCAGCAGGTATTTCCCCGAGTTCTGCAATG
CAGGGTTTCCTTCTCCAAGGTAACAGCTATTCCAATTACAAGCCAATGAG
TTGGAAATGTCGTTGTGGTGACCACTTTTTCAACCCTTAG
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protein sequence of rna-XM_014638176.2_VrVC1973A-SNU_v1

>rna-XM_014638176.2_VrVC1973A-SNU_v1 ID=rna-XM_014638176.2_VrVC1973A-SNU_v1; Name=rna-XM_014638176.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=129bp
MIMASLNPIQNSTTIILLVAIFITFLLHHLLCPVSCFVQPHHAIPPEDPS
SYEEKNRLGSMPPTCHNKCNQCHPCMAVQVPSLPSHNRVHPAGISPSSAM
QGFLLQGNSYSNYKPMSWKCRCGDHFFNP
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mRNA from alignment at chr02:22763663..22765257+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_014638176.2_VrVC1973A-SNU_v1 ID=rna-XM_014638176.2_VrVC1973A-SNU_v1; Name=rna-XM_014638176.2; organism=Vigna radiata; type=mRNA; length=1595bp; location=Sequence derived from: chr02:22763663..22765257+ (Vigna radiata
ACCACTAAATCATTGTAACTTCTTAATTAGACATTATGAATTTCTTCTTT
CACACAACTTTGTTCAGTATAGAGTTGAgttctttttgtcttttaggTCA
AATGGATTCATTTTCTTCTGAGTGTTAATGATACTTTCCTGTTTCCATAG
CATAGAGCACCTCCTTTACTTGCATGAGTAGCCATGATCTGATTGAAAAC
TCGCAATTGTAAAAGGTTAATCAAGTCAAAGATACTGAATGCTCAATACC
ATGACACTCCAAGAACTGTTACAAAAATTAGATAGCTTAATAAATGACAA
TTTTAACTACCACCTGCCAATgtgtgtttttaaattttacccACTCATAC
ACACAAGAAAAAATTTCTCTTTCCACCCTGCCACTTATAATCAGTCACAA
CTACTAATAGATCACTGGGCAAGGGGTCCTTGATACTGATTTGGATTCTC
CCATTTTGTTTACCTCTATTGAACTGTTCCTTTCACTTTTTCTGTCACAG
TCTGCTCCCTCTCTCTCTACACTGCCAACACAACGCGCACCCTCTGATCG
ATGCACatcctctttcttctcttcatagGCCACAGGAATAAAAAGCATTC
ATCACTCACAAAgctaaacattttattttttccctcTCCAACTTCTTGTA
TTATCACCATCTCTCACAGCTcagttaacatttaaatttattataagtgT
TTGGGTATAGATTGGGAATGACATCAAGAAATGACATGATAGGCATTCAT
GATCATGGCTTCACTCAATCCAATTCAGAACTCCACCACCATTATCTTGC
TTGTTgcaatatttattacatttctACTGCACCATCTGCTGTGTCCAGTT
TCTTGTTTCGTGCAACCACATCATGCAATTCCTCCAGAGGTAGGCTTTAA
TAGAAGTCATAATTTctgtgtttgttgttgtttaaaAATACTCAGTTGGG
TTTTTGTTCTATGCAGGACCCTTCTTCGTATGAGGAGAAAAACAGATTAG
GTTCAATGCCTCCTACTTGCCACAACAAATGCAACCAGTGTCATCCATGC
ATGGCAGTGCAAGTTCCATCTTTACCTAGTCACAACCGAGTCCACCCAGC
AGGTATTTCCCCGAGTTCTGCAATGCAGGGTTTCCTTCTCCAAGGTAACA
GCTATTCCAATTACAAGCCAATGAGTTGGAAATGTCGTTGTGGTGACCAC
TTTTTCAACCCTTAGAAATTGTATTATGTTCTCATGGAGATAGATTACTC
TCACAGCTGTAGAATGAAAAATTGTTCCTCTTGTTTTCCATTTGATAAGC
CACCGACAAAATTTCTGTAAACTTCTGTAGCTGTTTATGTTGTTCTTTTT
TAATTAGGAGAGTTCGTCTCACTACcagatgaaattattttataataaat
aatgatatacaATATCAACATCAAAGATCAATCTTACTTCAAATTTTGTA
TCTTGAATTTATCTGTGTATGCATAGAGGGTCATTTGCCGCAGCATTTAT
CTGTGTATTGAAGTTTGAAATTGGACAGAATTTGTTAAAAGCTGCAATCT
GACTTTATGATTGTGTTTTGAAtctatttttttgtaattttgata
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Coding sequence (CDS) from alignment at chr02:22763663..22765257+

>rna-XM_014638176.2_VrVC1973A-SNU_v1 ID=rna-XM_014638176.2_VrVC1973A-SNU_v1; Name=rna-XM_014638176.2; organism=Vigna radiata; type=CDS; length=390bp; location=Sequence derived from: chr02:22763663..22765257+ (Vigna radiata
ATGATCATGGCTTCACTCAATCCAATTCAGAACTCCACCACCATTATCTT
GCTTGTTgcaatatttattacatttctACTGCACCATCTGCTGTGTCCAG
TTTCTTGTTTCGTGCAACCACATCATGCAATTCCTCCAGAGGACCCTTCT
TCGTATGAGGAGAAAAACAGATTAGGTTCAATGCCTCCTACTTGCCACAA
CAAATGCAACCAGTGTCATCCATGCATGGCAGTGCAAGTTCCATCTTTAC
CTAGTCACAACCGAGTCCACCCAGCAGGTATTTCCCCGAGTTCTGCAATG
CAGGGTTTCCTTCTCCAAGGTAACAGCTATTCCAATTACAAGCCAATGAG
TTGGAAATGTCGTTGTGGTGACCACTTTTTCAACCCTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR039455EPFL
Vocabulary: Biological Process
TermDefinition
GO:0010374stomatal complex development