rna-XM_014648631.2
Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_014648631.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UDK4|A0A1S3UDK4_VIGRR (uncharacterized protein LOC106764347 OS=Vigna radiata var. radiata OX=3916 GN=LOC106764347 PE=4 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 1.763e-108 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0 Query: 1 MSQPKDHSARKVAFSWENKPGVSKVTSTPLAETLIPKEQELLAKLPPPPFTPEEATHKNHVHNFQIPLPPCAFQPPFYRTSSKRGLWVQDKDPFLAAFKECTKNQKSAKVNKKFIKDGIQSRVRKSMSFFSCTRSCTVHDTNLLRISHLDDD 152 MSQPKDHSARKVAFSWENKPGVSKVTSTPLAETLIPKEQELLAKLPPPPFTPEEATHKNHVHNFQIPLPPCAFQPPFYRTSSKRGLWVQDKDPFLAAFKECTKNQKSAKVNKKFIKDGIQSRVRKSMSFFSCTRSCTVHDTNLLRISHLDDD Sbjct: 1 MSQPKDHSARKVAFSWENKPGVSKVTSTPLAETLIPKEQELLAKLPPPPFTPEEATHKNHVHNFQIPLPPCAFQPPFYRTSSKRGLWVQDKDPFLAAFKECTKNQKSAKVNKKFIKDGIQSRVRKSMSFFSCTRSCTVHDTNLLRISHLDDD 152
BLAST of rna-XM_014648631.2 vs. UniProtKB/TrEMBL
Match: tr|V7CU78|V7CU78_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G030800g PE=4 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 2.418e-99 Identity = 141/152 (92.76%), Postives = 144/152 (94.74%), Query Frame = 0 Query: 1 MSQPKDHSARKVAFSWENKPGVSKVTSTPLAETLIPKEQELLAKLPPPPFTPEEATHKNHVHNFQIPLPPCAFQPPFYRTSSKRGLWVQDKDPFLAAFKECTKNQKSAKVNKKFIKDGIQSRVRKSMSFFSCTRSCTVHDTNLLRISHLDDD 152 MSQPKDHSARKV FSWE KPGVSKVTS P ETLIPKEQE+LAKLPPPP TPEEATHKNHV NFQIPLPPCAFQPP+YRTSSKRGLWVQDKDPFLAAFKECTKNQKSAKVNKK IKDGI+SRVRKSMSFFSCTRSCTVHDTNLLRISHLDDD Sbjct: 1 MSQPKDHSARKVTFSWEKKPGVSKVTSKPPCETLIPKEQEILAKLPPPPCTPEEATHKNHVLNFQIPLPPCAFQPPYYRTSSKRGLWVQDKDPFLAAFKECTKNQKSAKVNKKLIKDGIESRVRKSMSFFSCTRSCTVHDTNLLRISHLDDD 152
BLAST of rna-XM_014648631.2 vs. UniProtKB/TrEMBL
Match: tr|A0A371GG12|A0A371GG12_MUCPR (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_28785 PE=4 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 2.527e-92 Identity = 134/153 (87.58%), Postives = 143/153 (93.46%), Query Frame = 0 Query: 1 MSQPKDHSARKVAFSWENKPGVSKVTSTPL-AETLIPKEQELLAKLPPPPFTPEEATHKNHVHNFQIPLPPCAFQPPFYRTSSKRGLWVQDKDPFLAAFKECTKNQKSAKVNKKFIKDGIQSRVRKSMSFFSCTRSCTVHDTNLLRISHLDDD 152 MSQP+DHSARK+ FSWE KPGVSKVTST ETLIPKEQELLAKLPPPP TPEEA++KNHVH+FQIPLPPCAFQPPFYRTSSKRGLWVQDKDPFLAAFKECTKNQKSAKVNKK IKDGI+SRVRKSMSFF+CTRSCTVHD +L+RISHLD D Sbjct: 159 MSQPRDHSARKITFSWEKKPGVSKVTSTSTHGETLIPKEQELLAKLPPPPCTPEEASYKNHVHDFQIPLPPCAFQPPFYRTSSKRGLWVQDKDPFLAAFKECTKNQKSAKVNKKLIKDGIESRVRKSMSFFTCTRSCTVHDNSLVRISHLDKD 311
BLAST of rna-XM_014648631.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MDL1|A0A4D6MDL1_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG7g336 PE=4 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 2.387e-91 Identity = 135/153 (88.24%), Postives = 140/153 (91.50%), Query Frame = 0 Query: 1 MSQPKDHSARKVAFSWENKPGVSKVTSTPLAETLIPKEQELLAKLPPPPFTPEEATHKNHVHNFQIPLPPCAFQPPFYRTSSKRGLWVQDKDPFLAAFKECTKNQKSA-KVNKKFIKDGIQSRVRKSMSFFSCTRSCTVHDTNLLRISHLDDD 152 MSQPKDHSARK+ FSWE KPGVSKVTS ETLIP+E+E LAKLPPPP TPEEAT KNHVHNFQIPLPPCAFQPPFYRTSSKRGLW QD+DPFLAAFKECTKNQKS KVNKKFIK GI+SRVRKSMSFFSCTRSCTVHDTNLLRISHLDDD Sbjct: 1 MSQPKDHSARKITFSWEKKPGVSKVTS----ETLIPEEEEFLAKLPPPPCTPEEATPKNHVHNFQIPLPPCAFQPPFYRTSSKRGLWFQDRDPFLAAFKECTKNQKSGNKVNKKFIKHGIESRVRKSMSFFSCTRSCTVHDTNLLRISHLDDD 149
BLAST of rna-XM_014648631.2 vs. UniProtKB/TrEMBL
Match: tr|I1MXF8|I1MXF8_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100791035 PE=4 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 8.644e-80 Identity = 124/160 (77.50%), Postives = 136/160 (85.00%), Query Frame = 0 Query: 1 MSQPKDHSARKVAFSWENKPGVSKVTSTPLAETLIPKEQELLAKLPPPPFTPEEAT----HKNH--VHNFQIPLPPCAFQPPFYRTSSKRGLWVQDKDPFLAAFKECTKNQK--SAKVNKKFIKDGIQSRVRKSMSFFSCTRSCTVHDTNLLRISHLDDD 152 MSQP RK++FSWE KPGVSKVT+T E LIPKE+E LAKLPPPP TPEE++ HKNH + +FQIPLPPCAFQPPFYRTSSKRGLWVQDKDPFLAAFKECTKN + SAKVNKK IKDGI++RVRKSMSFFSCTRSCTVHDTNL+RISHLD D Sbjct: 1 MSQP----IRKISFSWEKKPGVSKVTTTTHGENLIPKEEEFLAKLPPPPCTPEESSATHHHKNHHPLLDFQIPLPPCAFQPPFYRTSSKRGLWVQDKDPFLAAFKECTKNHQKTSAKVNKKLIKDGIEARVRKSMSFFSCTRSCTVHDTNLVRISHLDQD 156
BLAST of rna-XM_014648631.2 vs. UniProtKB/TrEMBL
Match: tr|C6T757|C6T757_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 1.187e-79 Identity = 124/160 (77.50%), Postives = 136/160 (85.00%), Query Frame = 0 Query: 1 MSQPKDHSARKVAFSWENKPGVSKVTSTPLAETLIPKEQELLAKLPPPPFTPEEAT----HKNH--VHNFQIPLPPCAFQPPFYRTSSKRGLWVQDKDPFLAAFKECTKNQK--SAKVNKKFIKDGIQSRVRKSMSFFSCTRSCTVHDTNLLRISHLDDD 152 MSQP RK++FSWE KPGVSKVT+T E LIPKE+E LAKLPPPP TPEE++ HKNH + +FQIPLPPCAFQPPFYRTSSKRGLWVQDKDPFLAAFKECTKN + SAKVNKK IKDGI++RVRKSMSFFSCTRSCTVHDTNL+RISHLD D Sbjct: 1 MSQP----IRKISFSWEKKPGVSKVTTTTHGENLIPKEEEFLAKLPPPPCTPEESSATHHHKNHHPLLDFQIPLPPCAFQPPFYRTSSKRGLWVQDKDPFLAAFKECTKNHQKTSAKVNKKLIKDGIEARVRKSMSFFSCTRSCTVHDTNLVRISHLDKD 156
BLAST of rna-XM_014648631.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445GB10|A0A445GB10_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_046772 PE=4 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 1.187e-79 Identity = 124/160 (77.50%), Postives = 136/160 (85.00%), Query Frame = 0 Query: 1 MSQPKDHSARKVAFSWENKPGVSKVTSTPLAETLIPKEQELLAKLPPPPFTPEEAT----HKNH--VHNFQIPLPPCAFQPPFYRTSSKRGLWVQDKDPFLAAFKECTKNQK--SAKVNKKFIKDGIQSRVRKSMSFFSCTRSCTVHDTNLLRISHLDDD 152 MSQP RK++FSWE KPGVSKVT+T E LIPKE+E LAKLPPPP TPEE++ HKNH + +FQIPLPPCAFQPPFYRTSSKRGLWVQDKDPFLAAFKECTKN + SAKVNKK IKDGI++RVRKSMSFFSCTRSCTVHDTNL+RISHLD D Sbjct: 1 MSQP----IRKISFSWEKKPGVSKVTTTTHGENLIPKEEEFLAKLPPPPCTPEESSATHHHKNHHPLLDFQIPLPPCAFQPPFYRTSSKRGLWVQDKDPFLAAFKECTKNHQKTSAKVNKKLIKDGIEARVRKSMSFFSCTRSCTVHDTNLVRISHLDKD 156
BLAST of rna-XM_014648631.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RPM9|A0A0S3RPM9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.03G260300 PE=4 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 3.666e-79 Identity = 119/130 (91.54%), Postives = 120/130 (92.31%), Query Frame = 0 Query: 1 MSQPKDHSARKVAFSWENKPGVSKVTSTPLAETLIPKEQELLAKLPPPPFTPEEATHKNHVHNFQIPLPPCAFQPPFYRTSSKRGLWVQDKDPFLAAFKECTKNQKSAKVNKKFIKDGIQSRVRKSMSFF 130 MSQPKDHSARKVAFSWENKPGVSKVTSTP AETLIPKEQE LAKLPPPP TPEEAT KNHVHNFQIPLPPCAFQPPFYRTSSKRGLWVQDKDPFLAAFKECTKNQKSAKVNKKFIKDGIQSR + F Sbjct: 1 MSQPKDHSARKVAFSWENKPGVSKVTSTPPAETLIPKEQEFLAKLPPPPCTPEEATLKNHVHNFQIPLPPCAFQPPFYRTSSKRGLWVQDKDPFLAAFKECTKNQKSAKVNKKFIKDGIQSRELNRLENF 130
BLAST of rna-XM_014648631.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445H3K2|A0A445H3K2_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_038137 PE=4 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 5.624e-78 Identity = 123/158 (77.85%), Postives = 132/158 (83.54%), Query Frame = 0 Query: 1 MSQPKDHSARKVAFSWENKPGVSKVTSTPLAETLIPKEQELLAKLPPPPFTPEEAT---HKNH-VHNFQIPLPPCAFQPPFYRTSSKRGLWVQDKDPFLAAFKECTKNQK--SAKVNKKFIKDGIQSRVRKSMSFFSCTRSCTVHDTNLLRISHLDDD 152 MSQP RK+ FSWE KPGVSKVTST E LIPKE+E LAKLPPPP TPEE+ HKNH + +FQIPLPPCAFQPPFYRTSS+R LWVQDKDPFLAAFKECTKN + SA VNKK IKDGI+SRVRKSMSFFSCTRSCTVHDTNL+RISHLD D Sbjct: 1 MSQP----VRKITFSWEKKPGVSKVTSTHHGENLIPKEEEFLAKLPPPPCTPEESATTHHKNHPLLDFQIPLPPCAFQPPFYRTSSRRCLWVQDKDPFLAAFKECTKNHQKSSATVNKKLIKDGIESRVRKSMSFFSCTRSCTVHDTNLVRISHLDKD 154
BLAST of rna-XM_014648631.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0R0E4R3|A0A0R0E4R3_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100800855 PE=4 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 5.624e-78 Identity = 123/158 (77.85%), Postives = 132/158 (83.54%), Query Frame = 0 Query: 1 MSQPKDHSARKVAFSWENKPGVSKVTSTPLAETLIPKEQELLAKLPPPPFTPEEAT---HKNH-VHNFQIPLPPCAFQPPFYRTSSKRGLWVQDKDPFLAAFKECTKNQK--SAKVNKKFIKDGIQSRVRKSMSFFSCTRSCTVHDTNLLRISHLDDD 152 MSQP RK+ FSWE KPGVSKVTST E LIPKE+E LAKLPPPP TPEE+ HKNH + +FQIPLPPCAFQPPFYRTSS+R LWVQDKDPFLAAFKECTKN + SA VNKK IKDGI+SRVRKSMSFFSCTRSCTVHDTNL+RISHLD D Sbjct: 1 MSQP----VRKITFSWEKKPGVSKVTSTHHGENLIPKEEEFLAKLPPPPCTPEESATTHHKNHPLLDFQIPLPPCAFQPPFYRTSSRRCLWVQDKDPFLAAFKECTKNHQKSSATVNKKLIKDGIESRVRKSMSFFSCTRSCTVHDTNLVRISHLDKD 154 The following BLAST results are available for this feature:
BLAST of rna-XM_014648631.2 vs.
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot) Total hits: 0
BLAST of rna-XM_014648631.2 vs.
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11) Total hits: 0
BLAST of rna-XM_014648631.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_014648631.2_VrVC1973A-SNU_v1 ID=rna-XM_014648631.2_VrVC1973A-SNU_v1; Name=rna-XM_014648631.2; organism=Vigna radiata; type=mRNA; length=459bpback to top protein sequence of rna-XM_014648631.2_VrVC1973A-SNU_v1 >rna-XM_014648631.2_VrVC1973A-SNU_v1 ID=rna-XM_014648631.2_VrVC1973A-SNU_v1; Name=rna-XM_014648631.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=152bpback to top mRNA from alignment at chr06:34209076..34210032+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_014648631.2_VrVC1973A-SNU_v1 ID=rna-XM_014648631.2_VrVC1973A-SNU_v1; Name=rna-XM_014648631.2; organism=Vigna radiata; type=mRNA; length=957bp; location=Sequence derived from: chr06:34209076..34210032+ (Vigna radiataback to top Coding sequence (CDS) from alignment at chr06:34209076..34210032+ >rna-XM_014648631.2_VrVC1973A-SNU_v1 ID=rna-XM_014648631.2_VrVC1973A-SNU_v1; Name=rna-XM_014648631.2; organism=Vigna radiata; type=CDS; length=459bp; location=Sequence derived from: chr06:34209076..34210032+ (Vigna radiataback to top |