rna-XM_014648310.2
|
Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_014648310.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q8LFM2|GASAA_ARATH (Gibberellin-regulated protein 10 OS=Arabidopsis thaliana OX=3702 GN=GASA10 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.267e-33 Identity = 57/89 (64.04%), Postives = 66/89 (74.16%), Query Frame = 0
Query: 1 MKLSFAAMLLLCLLLSFSFFQLSSAASGFCSSKCANRCSKAGRKDRCLKFCGICCSKCK-CVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
MK +L++ LL++ S F LS+A S C KC RCSKAGR+DRCLK+C ICC KC CVPSGTYGNK ECPCYRD+KNSKG KCP
Sbjct: 1 MKFPAVKVLIISLLITSSLFILSTADSSPCGGKCNVRCSKAGRQDRCLKYCNICCEKCNYCVPSGTYGNKDECPCYRDMKNSKGTSKCP 89
BLAST of rna-XM_014648310.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q948Z4|SNAK1_SOLTU (Snakin-1 OS=Solanum tuberosum OX=4113 GN=SN1 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 7.941e-33 Identity = 54/74 (72.97%), Postives = 59/74 (79.73%), Query Frame = 0
Query: 15 LSFSFFQLSSAASGFCSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
++ S Q + A S FC SKC RCSKAG DRCLK+CGICC +CKCVPSGTYGNKHECPCYRD KNSKGK KCP
Sbjct: 15 ITPSLIQTTMAGSSFCDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYRDKKNSKGKSKCP 88
BLAST of rna-XM_014648310.2 vs. UniProtKB/Swiss-Prot
Match: sp|O80641|GASA8_ARATH (Gibberellin-regulated protein 8 OS=Arabidopsis thaliana OX=3702 GN=At2g39540 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.750e-30 Identity = 54/88 (61.36%), Postives = 63/88 (71.59%), Query Frame = 0
Query: 1 MKLSFAAMLLLCLLLSFSFFQLSSAASGFCSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
MKL ++ LLL+ SF LSSA S C KC RCSKAG+ + CLK+C ICC KC CVPSGT+G+K ECPCYRD+KNSKG KCP
Sbjct: 1 MKLVVVQFFIISLLLTSSFSVLSSADSS-CGGKCNVRCSKAGQHEECLKYCNICCQKCNCVPSGTFGHKDECPCYRDMKNSKGGSKCP 87
BLAST of rna-XM_014648310.2 vs. UniProtKB/Swiss-Prot
Match: sp|P86888|PMLN_PRUPE (Peamaclein OS=Prunus persica OX=3760 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.410e-28 Identity = 49/63 (77.78%), Postives = 52/63 (82.54%), Query Frame = 0
Query: 26 ASGFCSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
S FC SKC RCSKAG ++RCLK+CGICC KC CVPSGTYGNK ECPCYRDLKNSKG KCP
Sbjct: 1 GSSFCDSKCGVRCSKAGYQERCLKYCGICCEKCHCVPSGTYGNKDECPCYRDLKNSKGNPKCP 63
BLAST of rna-XM_014648310.2 vs. UniProtKB/Swiss-Prot
Match: sp|O82328|GASA7_ARATH (Gibberellin-regulated protein 7 OS=Arabidopsis thaliana OX=3702 GN=GASA7 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.779e-24 Identity = 43/64 (67.19%), Postives = 48/64 (75.00%), Query Frame = 0
Query: 25 AASGFCSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
A +C KC RC +AG KDRCLK+CGICC C+CVPSGTYGNKHEC CYRD +SKG KCP
Sbjct: 45 ALEKWCGQKCEGRCKEAGMKDRCLKYCGICCKDCQCVPSGTYGNKHECACYRDKLSSKGTPKCP 108
BLAST of rna-XM_014648310.2 vs. UniProtKB/Swiss-Prot
Match: sp|C0HLQ1|CMLN_CRYJA (Cypmaclein OS=Cryptomeria japonica OX=3369 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 7.959e-22 Identity = 40/59 (67.80%), Postives = 44/59 (74.58%), Query Frame = 0
Query: 30 CSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
C +C RCSKA DRCLK+CGICC KC CVP GTYGN+ CPCY +LKNSKG KCP
Sbjct: 5 CDKECNRRCSKASAHDRCLKYCGICCEKCNCVPPGTYGNEDSCPCYANLKNSKGGHKCP 63
BLAST of rna-XM_014648310.2 vs. UniProtKB/Swiss-Prot
Match: sp|C0HLQ2|CMLN1_CUPSE (Cypmaclein OS=Cupressus sempervirens OX=13469 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.888e-20 Identity = 39/59 (66.10%), Postives = 43/59 (72.88%), Query Frame = 0
Query: 30 CSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
C +C RCSKA DRCLK+CGICC KC CVP GT GN+ CPCY +LKNSKG KCP
Sbjct: 5 CDKECNRRCSKASAHDRCLKYCGICCEKCHCVPPGTAGNEDVCPCYANLKNSKGGHKCP 63
BLAST of rna-XM_014648310.2 vs. UniProtKB/Swiss-Prot
Match: sp|C0HLQ0|CMLN_JUNAS (Cypmaclein OS=Juniperus ashei OX=13101 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.374e-20 Identity = 39/59 (66.10%), Postives = 43/59 (72.88%), Query Frame = 0
Query: 30 CSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
C +C RCSKA DRCLK+CGICC KC CVP GT GN+ CPCY +LKNSKG KCP
Sbjct: 5 CDKECNRRCSKASAHDRCLKYCGICCKKCHCVPPGTAGNEDVCPCYANLKNSKGGHKCP 63
BLAST of rna-XM_014648310.2 vs. UniProtKB/Swiss-Prot
Match: sp|P47926|RSI1_SOLLC (Protein RSI-1 OS=Solanum lycopersicum OX=4081 GN=RSI-1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.224e-16 Identity = 36/94 (38.30%), Postives = 46/94 (48.94%), Query Frame = 0
Query: 2 KLSFAAMLLLCLLLSFSFFQLSSAASGF-------CSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
K + A LL + + S+ G+ C +C RCS K C+ FC CC+ C CVP G YGNK CPCY + K +GK KCP
Sbjct: 3 KSGYNASFLLLISMFLILLTFSNVVEGYNKLRPTDCKPRCTYRCSATSHKKPCMFFCQKCCATCLCVPKGVYGNKQSCPCYNNWKTQEGKPKCP 96
BLAST of rna-XM_014648310.2 vs. UniProtKB/Swiss-Prot
Match: sp|P27057|GAST1_SOLLC (Protein GAST1 OS=Solanum lycopersicum OX=4081 GN=GAST1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.796e-15 Identity = 33/59 (55.93%), Postives = 38/59 (64.41%), Query Frame = 0
Query: 30 CSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
C KC RCSK K C+ FC CC+KC CVP+GTYGNK CPCY + K +G KCP
Sbjct: 54 CQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNWKTKRGGPKCP 112
BLAST of rna-XM_014648310.2 vs. Araport11
Match: AT5G59845.1 (| Gibberellin-regulated family protein | Chr5:24111443-24111808 FORWARD LENGTH=89 | 201606) HSP 1 Score: 114.005 bits (284), Expect = 1.296e-34 Identity = 57/89 (64.04%), Postives = 66/89 (74.16%), Query Frame = 0
Query: 1 MKLSFAAMLLLCLLLSFSFFQLSSAASGFCSSKCANRCSKAGRKDRCLKFCGICCSKCK-CVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
MK +L++ LL++ S F LS+A S C KC RCSKAGR+DRCLK+C ICC KC CVPSGTYGNK ECPCYRD+KNSKG KCP
Sbjct: 1 MKFPAVKVLIISLLITSSLFILSTADSSPCGGKCNVRCSKAGRQDRCLKYCNICCEKCNYCVPSGTYGNKDECPCYRDMKNSKGTSKCP 89
BLAST of rna-XM_014648310.2 vs. Araport11
Match: AT2G39540.1 (| Gibberellin-regulated family protein | Chr2:16500866-16501241 FORWARD LENGTH=87 | 201606) HSP 1 Score: 105.531 bits (262), Expect = 2.814e-31 Identity = 54/88 (61.36%), Postives = 63/88 (71.59%), Query Frame = 0
Query: 1 MKLSFAAMLLLCLLLSFSFFQLSSAASGFCSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
MKL ++ LLL+ SF LSSA S C KC RCSKAG+ + CLK+C ICC KC CVPSGT+G+K ECPCYRD+KNSKG KCP
Sbjct: 1 MKLVVVQFFIISLLLTSSFSVLSSADSS-CGGKCNVRCSKAGQHEECLKYCNICCQKCNCVPSGTFGHKDECPCYRDMKNSKGGSKCP 87
BLAST of rna-XM_014648310.2 vs. Araport11
Match: AT1G10588.1 (| Gibberellin-regulated family protein | Chr1:3501276-3501655 FORWARD LENGTH=90 | 201606) HSP 1 Score: 103.219 bits (256), Expect = 2.405e-30 Identity = 54/90 (60.00%), Postives = 63/90 (70.00%), Query Frame = 0
Query: 1 MKLSFAAML-LLCLLLSFSFFQLSSAASGFCSSKCANRCSKAGR-KDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
MK+ ++ LLL+ SF+ LSSA S C KC+ RCSKA R + CL+ C ICC KC CVPSGTYGNK ECPCYRD+KNSKG KCP
Sbjct: 1 MKMPVVVQFFIISLLLTSSFYVLSSADSSACGGKCSVRCSKADRTHEECLEDCDICCQKCNCVPSGTYGNKDECPCYRDMKNSKGGSKCP 90
BLAST of rna-XM_014648310.2 vs. Araport11
Match: AT1G10588.2 (| Gibberellin-regulated family protein | Chr1:3501276-3501655 FORWARD LENGTH=89 | 201606) HSP 1 Score: 98.9821 bits (245), Expect = 9.282e-29 Identity = 54/90 (60.00%), Postives = 63/90 (70.00%), Query Frame = 0
Query: 1 MKLSFAAML-LLCLLLSFSFFQLSSAASGFCSSKCANRCSKAGR-KDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
MK+ ++ LLL+ SF+ LSSA S C KC+ RCSKA R + CL+ C ICC KC CVPSGTYGNK ECPCYRD+KNSKG KCP
Sbjct: 1 MKMPVVVQFFIISLLLTSSFYVLSSADSS-CGGKCSVRCSKADRTHEECLEDCDICCQKCNCVPSGTYGNKDECPCYRDMKNSKGGSKCP 89
BLAST of rna-XM_014648310.2 vs. Araport11
Match: AT2G14900.1 (| Gibberellin-regulated family protein | Chr2:6404210-6405043 FORWARD LENGTH=108 | 201606) HSP 1 Score: 90.8929 bits (224), Expect = 2.843e-25 Identity = 43/64 (67.19%), Postives = 48/64 (75.00%), Query Frame = 0
Query: 25 AASGFCSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
A +C KC RC +AG KDRCLK+CGICC C+CVPSGTYGNKHEC CYRD +SKG KCP
Sbjct: 45 ALEKWCGQKCEGRCKEAGMKDRCLKYCGICCKDCQCVPSGTYGNKHECACYRDKLSSKGTPKCP 108
BLAST of rna-XM_014648310.2 vs. Araport11
Match: AT1G74670.1 (| Gibberellin-regulated family protein | Chr1:28053378-28053893 FORWARD LENGTH=101 | 201606) HSP 1 Score: 68.1662 bits (165), Expect = 2.234e-16 Identity = 38/97 (39.18%), Postives = 47/97 (48.45%), Query Frame = 0
Query: 5 FAAMLLLCLLLSFSFFQLSSAA-------------SGFCSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
+ LLL +L +F +S A S C +C RCS C+ FC CC+KC CVP GTYGNK CPCY + K +G KCP
Sbjct: 5 ITSFLLLTILFTFVCLTMSKEAEYHPESYGPGSLKSYQCGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 101
BLAST of rna-XM_014648310.2 vs. Araport11
Match: AT5G15230.1 (| GAST1 protein homolog 4 | Chr5:4945017-4946025 FORWARD LENGTH=106 | 201606) HSP 1 Score: 67.0106 bits (162), Expect = 6.956e-16 Identity = 39/106 (36.79%), Postives = 49/106 (46.23%), Query Frame = 0
Query: 1 MKLSFAAMLLLCLLLSFSFFQLSSAASG------------------FCSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
M S+ A+ LL L++ F + A+SG C S+C RC K C+ FC CC KC CVP G YGNK C CY + K +G KCP
Sbjct: 1 MAKSYGAIFLLTLIVLFMLQTMVMASSGSNVKWSQKRYGPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106
BLAST of rna-XM_014648310.2 vs. Araport11
Match: AT1G22690.3 (| Gibberellin-regulated family protein | Chr1:8027328-8027961 FORWARD LENGTH=119 | 201606) HSP 1 Score: 65.0846 bits (157), Expect = 6.145e-15 Identity = 31/59 (52.54%), Postives = 36/59 (61.02%), Query Frame = 0
Query: 30 CSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
C CA RCSK RK C + CG CC+KC+CVP GT GN CPCY ++ K KCP
Sbjct: 61 CGHACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119
BLAST of rna-XM_014648310.2 vs. Araport11
Match: AT1G22690.2 (| Gibberellin-regulated family protein | Chr1:8027328-8027961 FORWARD LENGTH=119 | 201606) HSP 1 Score: 65.0846 bits (157), Expect = 6.145e-15 Identity = 31/59 (52.54%), Postives = 36/59 (61.02%), Query Frame = 0
Query: 30 CSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
C CA RCSK RK C + CG CC+KC+CVP GT GN CPCY ++ K KCP
Sbjct: 61 CGHACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119
BLAST of rna-XM_014648310.2 vs. Araport11
Match: AT1G22690.1 (| Gibberellin-regulated family protein | Chr1:8027328-8027961 FORWARD LENGTH=119 | 201606) HSP 1 Score: 65.0846 bits (157), Expect = 6.145e-15 Identity = 31/59 (52.54%), Postives = 36/59 (61.02%), Query Frame = 0
Query: 30 CSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
C CA RCSK RK C + CG CC+KC+CVP GT GN CPCY ++ K KCP
Sbjct: 61 CGHACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119
BLAST of rna-XM_014648310.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UCQ4|A0A1S3UCQ4_VIGRR (peamaclein OS=Vigna radiata var. radiata OX=3916 GN=LOC106764089 PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 8.012e-54 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0
Query: 1 MKLSFAAMLLLCLLLSFSFFQLSSAASGFCSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
MKLSFAAMLLLCLLLSFSFFQLSSAASGFCSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP
Sbjct: 1 MKLSFAAMLLLCLLLSFSFFQLSSAASGFCSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
BLAST of rna-XM_014648310.2 vs. UniProtKB/TrEMBL
Match: tr|Q4TZI9|Q4TZI9_VIGRA (GIR1 OS=Vigna radiata OX=157791 GN=GIR1 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 3.646e-53 Identity = 87/88 (98.86%), Postives = 87/88 (98.86%), Query Frame = 0
Query: 1 MKLSFAAMLLLCLLLSFSFFQLSSAASGFCSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
MKLSFAAMLLLCLLLSFSFFQLSSAASGFCSSKCANRCSKAGRKDRCLK CGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP
Sbjct: 1 MKLSFAAMLLLCLLLSFSFFQLSSAASGFCSSKCANRCSKAGRKDRCLKLCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
BLAST of rna-XM_014648310.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0R0FHN7|A0A0R0FHN7_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100305602 PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 5.509e-43 Identity = 68/88 (77.27%), Postives = 79/88 (89.77%), Query Frame = 0
Query: 1 MKLSFAAMLLLCLLLSFSFFQLSSAASGFCSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
MK++FAA+LL+CL+LS S F++S A S FCSSKC+ RCS+AG KDRC+KFCGICCSKC CVPSGTYGNKHECPCYRD+KNSKGK KCP
Sbjct: 1 MKVAFAAVLLICLVLSSSLFEVSMAGSAFCSSKCSKRCSRAGMKDRCMKFCGICCSKCNCVPSGTYGNKHECPCYRDMKNSKGKAKCP 88
BLAST of rna-XM_014648310.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2SLM6|A0A0B2SLM6_GLYSO (Snakin-1 OS=Glycine soja OX=3848 GN=D0Y65_046816 PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 5.509e-43 Identity = 68/88 (77.27%), Postives = 79/88 (89.77%), Query Frame = 0
Query: 1 MKLSFAAMLLLCLLLSFSFFQLSSAASGFCSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
MK++FAA+LL+CL+LS S F++S A S FCSSKC+ RCS+AG KDRC+KFCGICCSKC CVPSGTYGNKHECPCYRD+KNSKGK KCP
Sbjct: 1 MKVAFAAVLLICLVLSSSLFEVSMAGSAFCSSKCSKRCSRAGMKDRCMKFCGICCSKCNCVPSGTYGNKHECPCYRDMKNSKGKAKCP 88
BLAST of rna-XM_014648310.2 vs. UniProtKB/TrEMBL
Match: tr|C6SVU2|C6SVU2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.647e-42 Identity = 67/88 (76.14%), Postives = 78/88 (88.64%), Query Frame = 0
Query: 1 MKLSFAAMLLLCLLLSFSFFQLSSAASGFCSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
MK++FAA+LL+CL+LS S F++S A S FCSSKC+ RCS+AG KDRC+KFCGICC KC CVPSGTYGNKHECPCYRD+KNSKGK KCP
Sbjct: 1 MKVAFAAVLLICLVLSSSLFEVSMAGSAFCSSKCSKRCSRAGMKDRCMKFCGICCGKCNCVPSGTYGNKHECPCYRDMKNSKGKAKCP 88
BLAST of rna-XM_014648310.2 vs. UniProtKB/TrEMBL
Match: tr|C6T0H2|C6T0H2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 2.876e-42 Identity = 67/88 (76.14%), Postives = 78/88 (88.64%), Query Frame = 0
Query: 1 MKLSFAAMLLLCLLLSFSFFQLSSAASGFCSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
MK++F A+LL+CL+LS S F++S A S FCSSKCA RCS+AG KDRC +FCGICCSKC+CVPSGTYGNKHECPCYRD+KNSKGK KCP
Sbjct: 28 MKVAFVAVLLICLVLSSSLFEVSMAGSAFCSSKCAKRCSRAGMKDRCTRFCGICCSKCRCVPSGTYGNKHECPCYRDMKNSKGKPKCP 115
BLAST of rna-XM_014648310.2 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z4U0X9|A0A2Z4U0X9_9FABA (Snakin-like protein OS=Peltophorum dubium OX=191943 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.296e-42 Identity = 69/88 (78.41%), Postives = 76/88 (86.36%), Query Frame = 0
Query: 1 MKLSFAAMLLLCLLLSFSFFQLSSAASGFCSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
MKL FA +LL+CL+LS SF +++ A S FC SKCA RCSKAG KDRCL+FCGICC KCKCVPSGTYGNKHECPCYRDLKNSKGK KCP
Sbjct: 1 MKLVFATLLLVCLVLSASFVEVTLAGSEFCDSKCAQRCSKAGMKDRCLRFCGICCEKCKCVPSGTYGNKHECPCYRDLKNSKGKPKCP 88
BLAST of rna-XM_014648310.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0R0GKV9|A0A0R0GKV9_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_14G087200 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.886e-42 Identity = 67/88 (76.14%), Postives = 78/88 (88.64%), Query Frame = 0
Query: 1 MKLSFAAMLLLCLLLSFSFFQLSSAASGFCSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
MK++F A+LL+CL+LS S F++S A S FCSSKCA RCS+AG KDRC +FCGICCSKC+CVPSGTYGNKHECPCYRD+KNSKGK KCP
Sbjct: 1 MKVAFVAVLLICLVLSSSLFEVSMAGSAFCSSKCAKRCSRAGMKDRCTRFCGICCSKCRCVPSGTYGNKHECPCYRDMKNSKGKPKCP 88
BLAST of rna-XM_014648310.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2QJ72|A0A0B2QJ72_GLYSO (Snakin-1 OS=Glycine soja OX=3848 GN=D0Y65_038093 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.886e-42 Identity = 67/88 (76.14%), Postives = 78/88 (88.64%), Query Frame = 0
Query: 1 MKLSFAAMLLLCLLLSFSFFQLSSAASGFCSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
MK++F A+LL+CL+LS S F++S A S FCSSKCA RCS+AG KDRC +FCGICCSKC+CVPSGTYGNKHECPCYRD+KNSKGK KCP
Sbjct: 1 MKVAFVAVLLICLVLSSSLFEVSMAGSAFCSSKCAKRCSRAGMKDRCTRFCGICCSKCRCVPSGTYGNKHECPCYRDMKNSKGKPKCP 88
BLAST of rna-XM_014648310.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4U5N7S9|A0A4U5N7S9_POPAL (Gibberellin-regulated protein OS=Populus alba OX=43335 GN=D5086_0000277860 PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.833e-41 Identity = 68/88 (77.27%), Postives = 76/88 (86.36%), Query Frame = 0
Query: 1 MKLSFAAMLLLCLLLSFSFFQLSSAASGFCSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 88
MK FAA+ LLCL+ S S F+++ AASGFC SKC+ RCSKAG KDRCLK+CGICC KCKCVPSGTYGNKHECPCYRD+KNSKGK KCP
Sbjct: 1 MKPVFAAVFLLCLVFSSSLFEVTMAASGFCDSKCSARCSKAGIKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNSKGKPKCP 88 The following BLAST results are available for this feature:
BLAST of rna-XM_014648310.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot) Total hits: 10
BLAST of rna-XM_014648310.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11) Total hits: 10
BLAST of rna-XM_014648310.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_014648310.2_VrVC1973A-SNU_v1 ID=rna-XM_014648310.2_VrVC1973A-SNU_v1; Name=rna-XM_014648310.2; organism=Vigna radiata; type=mRNA; length=267bpback to top protein sequence of rna-XM_014648310.2_VrVC1973A-SNU_v1 >rna-XM_014648310.2_VrVC1973A-SNU_v1 ID=rna-XM_014648310.2_VrVC1973A-SNU_v1; Name=rna-XM_014648310.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=88bpback to top mRNA from alignment at chr06:34702510..34703883+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_014648310.2_VrVC1973A-SNU_v1 ID=rna-XM_014648310.2_VrVC1973A-SNU_v1; Name=rna-XM_014648310.2; organism=Vigna radiata; type=mRNA; length=1374bp; location=Sequence derived from: chr06:34702510..34703883+ (Vigna radiataback to top Coding sequence (CDS) from alignment at chr06:34702510..34703883+ >rna-XM_014648310.2_VrVC1973A-SNU_v1 ID=rna-XM_014648310.2_VrVC1973A-SNU_v1; Name=rna-XM_014648310.2; organism=Vigna radiata; type=CDS; length=267bp; location=Sequence derived from: chr06:34702510..34703883+ (Vigna radiataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|