rna-XM_014647929.1

Transcript Overview
Namerna-XM_014647929.1
Unique Namerna-XM_014647929.1_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length345
Productgermination-specific cysteine protease 1-like
References
External references for this mRNA
DatabaseAccession
GeneID106763771
GenbankXM_014647929.1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr06chromosomechr06:35652292..35653851 +Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
asvrvL054Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvrvL123Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvrvL158Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvrvL601Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vrvvrvL055Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvrvL163Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvssR591Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR611Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvuaR389Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvzwsR501Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuaR405Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuR448Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuaR431Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuR459Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvumR454Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR465Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR473Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR504Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvvaR529Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR564Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvstR448Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR459Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR467Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR500Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvunR422Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR433Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106763771gene-LOC106763771_VrVC1973A-SNU_v1Vigna radiatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_014647929.1-1exon-XM_014647929.1-1_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014647929.1-2exon-XM_014647929.1-2_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014647929.1-3exon-XM_014647929.1-3_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_014503415.1cds-XP_014503415.1_VrVC1973A-SNU_v1Vigna radiataCDS
cds-XP_014503415.1cds-XP_014503415.1_VrVC1973A-SNU_v1_2Vigna radiataCDS
cds-XP_014503415.1cds-XP_014503415.1_VrVC1973A-SNU_v1_3Vigna radiataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_014647929.1_VrVC1973A-SNU_v1rna-XM_014647929.1_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_014647929.1_VrVC1973A-SNU_v1rna-XM_014647929.1_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


Homology
[Close]
BLAST of rna-XM_014647929.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q94B08|RDL1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana OX=3702 GN=GCP1 PE=2 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 6.795e-38
Identity = 66/111 (59.46%), Postives = 76/111 (68.47%), Query Frame = 0 
Query:   21 FKNAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
             KN++VVSID YEDV +  E ALKK ++ QP                 G+F+G C T LDH VV VGYG+ENG DYWIVRNSWG  WGEEGYIRMERNL  S+SGKCGIA+
Sbjct:  245 LKNSRVVSIDGYEDVPTKDETALKKAISYQPVSVAIEAGGRIFQHYQSGIFTGSCGTNLDHAVVAVGYGSENGVDYWIVRNSWGPRWGEEGYIRMERNLAASKSGKCGIAV 355
[Close]
BLAST of rna-XM_014647929.1 vs. UniProtKB/Swiss-Prot
Match: sp|P43297|RD21A_ARATH (Cysteine proteinase RD21A OS=Arabidopsis thaliana OX=3702 GN=RD21A PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.507e-37
Identity = 69/110 (62.73%), Postives = 77/110 (70.00%), Query Frame = 0 
Query:   22 KNAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
            KNAKVV+IDSYEDV +Y E +LKK VA+QP                 G+F G C T LDHGVV VGYGTENG DYWIVRNSWG  WGE GY+RM RN+ +S SGKCGIAI
Sbjct:  238 KNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIEAGGRAFQLYDSGIFDGSCGTQLDHGVVAVGYGTENGKDYWIVRNSWGKSWGESGYLRMARNIASS-SGKCGIAI 346
[Close]
BLAST of rna-XM_014647929.1 vs. UniProtKB/Swiss-Prot
Match: sp|P25776|ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 1.257e-36
Identity = 67/110 (60.91%), Postives = 75/110 (68.18%), Query Frame = 0 
Query:   22 KNAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
            KNAKVV+IDSYEDV    E +L+K VANQP                 G+F+G C T LDHGV  VGYGTENG DYWIVRNSWG  WGE GY+RMERN+  S SGKCGIA+
Sbjct:  230 KNAKVVTIDSYEDVTPNSETSLQKAVANQPVSVAIEAGGRAFQLYSSGIFTGKCGTALDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMERNIKAS-SGKCGIAV 338
[Close]
BLAST of rna-XM_014647929.1 vs. UniProtKB/Swiss-Prot
Match: sp|P25251|CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus OX=3708 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.614e-35
Identity = 64/111 (57.66%), Postives = 76/111 (68.47%), Query Frame = 0 
Query:   21 FKNAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
             KN++VV+ID YEDV S  E ALK+ V+ QP                 G+F+G C T +DH VV VGYG+ENG DYWIVRNSWG  WGE+GYIRMERN+  S+SGKCGIAI
Sbjct:  200 LKNSRVVTIDGYEDVPSKDETALKRAVSYQPVSVAIDAGGRAFQHYQSGIFTGKCGTNMDHAVVAVGYGSENGVDYWIVRNSWGTRWGEDGYIRMERNVA-SKSGKCGIAI 309
[Close]
BLAST of rna-XM_014647929.1 vs. UniProtKB/Swiss-Prot
Match: sp|P25777|ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 8.262e-35
Identity = 67/123 (54.47%), Postives = 80/123 (65.04%), Query Frame = 0 
Query:   14 PYSSI-----FHFKNAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
            PY ++      + +NAKVVSID +EDV    E +L+K VA+QP                 GVFSG C T LDHGVV VGYGT+NG DYWIVRNSWG  WGE GY+RMERN+ N  +GKCGIA+
Sbjct:  230 PYKAVDGKCDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFSGRCGTSLDHGVVAVGYGTDNGKDYWIVRNSWGPKWGESGYVRMERNI-NVTTGKCGIAM 351
[Close]
BLAST of rna-XM_014647929.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FMH8|RD21B_ARATH (Probable cysteine protease RD21B OS=Arabidopsis thaliana OX=3702 GN=RD21B PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.918e-34
Identity = 65/110 (59.09%), Postives = 74/110 (67.27%), Query Frame = 0 
Query:   22 KNAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
            KNAKVV+IDSYEDV    E +LKK +A+QP                 GVF G C T LDHGVV VGYGTENG DYWIVRNSWG  WGE GYI+M RN+  + +GKCGIA+
Sbjct:  239 KNAKVVTIDSYEDVPENSEASLKKALAHQPISVAIEAGGRAFQLYSSGVFDGLCGTELDHGVVAVGYGTENGKDYWIVRNSWGNRWGESGYIKMARNI-EAPTGKCGIAM 347
[Close]
BLAST of rna-XM_014647929.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LT78|RD21C_ARATH (Probable cysteine protease RD21C OS=Arabidopsis thaliana OX=3702 GN=RD21C PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.752e-33
Identity = 61/110 (55.45%), Postives = 74/110 (67.27%), Query Frame = 0 
Query:   22 KNAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
            KN +VV+ID YEDV    E +LKK +ANQP                 GVF+G C T LDHGVV VGYG+E G DYWIVRNSWG++WGE GY ++ERN+  S SGKCG+A+
Sbjct:  231 KNTRVVTIDGYEDVPQNDEKSLKKALANQPISVAIEAGGRAFQLYTSGVFTGTCGTSLDHGVVAVGYGSEGGQDYWIVRNSWGSNWGESGYFKLERNIKES-SGKCGVAM 339
[Close]
BLAST of rna-XM_014647929.1 vs. UniProtKB/Swiss-Prot
Match: sp|P20721|CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.104e-31
Identity = 62/110 (56.36%), Postives = 74/110 (67.27%), Query Frame = 0 
Query:   22 KNAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
            KNAKVV IDSYEDV    E AL+K VA+QP                 G+F+G C T +DHGVV  GYGTENG DYWIVRNSWGA+  E GY+R++RN+ +S SG CG+AI
Sbjct:  119 KNAKVVKIDSYEDVPVNNEKALQKAVAHQPVSIALEAGGRDFQHYKSGIFTGKCGTAVDHGVVIAGYGTENGMDYWIVRNSWGANCRENGYLRVQRNVSSS-SGLCGLAI 227
[Close]
BLAST of rna-XM_014647929.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q7XR52|CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CP1 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 7.179e-31
Identity = 64/125 (51.20%), Postives = 79/125 (63.20%), Query Frame = 0 
Query:   14 PYSSI-----FHFKNAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTE--NGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
            PY+++        ++ KVVSID +EDV    EL+L+K VA+QP                 GVF+G C T LDHGVV VGYGT+   G  YW VRNSWG DWGE GYIRMERN+  +R+GKCGIA+
Sbjct:  245 PYTAMDGKCNLAKRSRKVVSIDGFEDVPENDELSLQKAVAHQPVSVAIDAGGREFQLYDSGVFTGRCGTNLDHGVVAVGYGTDAATGAAYWTVRNSWGPDWGENGYIRMERNV-TARTGKCGIAM 368
[Close]
BLAST of rna-XM_014647929.1 vs. UniProtKB/Swiss-Prot
Match: sp|P82474|CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale OX=94328 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 5.646e-30
Identity = 56/108 (51.85%), Postives = 68/108 (62.96%), Query Frame = 0 
Query:   23 NAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIA 113
            NA VVSIDSYE+V S+ E +L+K VANQP                 G+F+G C    +H +  VGYGTEN  D+WIV+NSWG +WGE GYIR ERN+ N   GKCGI 
Sbjct:  103 NAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNISANHALTVVGYGTENDKDFWIVKNSWGKNWGESGYIRAERNIENP-DGKCGIT 209
[Close]
BLAST of rna-XM_014647929.1 vs. Araport11
Match: AT4G36880.1 (| cysteine proteinase1 | Chr4:17374692-17376180 REVERSE LENGTH=376 | 201606)

HSP 1 Score: 134.035 bits (336), Expect = 7.100e-39
Identity = 66/111 (59.46%), Postives = 76/111 (68.47%), Query Frame = 0 
Query:   21 FKNAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
             KN++VVSID YEDV +  E ALKK ++ QP                 G+F+G C T LDH VV VGYG+ENG DYWIVRNSWG  WGEEGYIRMERNL  S+SGKCGIA+
Sbjct:  245 LKNSRVVSIDGYEDVPTKDETALKKAISYQPVSVAIEAGGRIFQHYQSGIFTGSCGTNLDHAVVAVGYGSENGVDYWIVRNSWGPRWGEEGYIRMERNLAASKSGKCGIAV 355
[Close]
BLAST of rna-XM_014647929.1 vs. Araport11
Match: AT1G47128.1 (| Granulin repeat cysteine protease family protein | Chr1:17283139-17285609 REVERSE LENGTH=462 | 201606)

HSP 1 Score: 134.806 bits (338), Expect = 1.542e-38
Identity = 69/110 (62.73%), Postives = 77/110 (70.00%), Query Frame = 0 
Query:   22 KNAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
            KNAKVV+IDSYEDV +Y E +LKK VA+QP                 G+F G C T LDHGVV VGYGTENG DYWIVRNSWG  WGE GY+RM RN+ +S SGKCGIAI
Sbjct:  238 KNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIEAGGRAFQLYDSGIFDGSCGTQLDHGVVAVGYGTENGKDYWIVRNSWGKSWGESGYLRMARNIASS-SGKCGIAI 346
[Close]
BLAST of rna-XM_014647929.1 vs. Araport11
Match: AT5G43060.1 (| Granulin repeat cysteine protease family protein | Chr5:17269784-17272117 REVERSE LENGTH=463 | 201606)

HSP 1 Score: 125.176 bits (313), Expect = 5.031e-35
Identity = 65/110 (59.09%), Postives = 74/110 (67.27%), Query Frame = 0 
Query:   22 KNAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
            KNAKVV+IDSYEDV    E +LKK +A+QP                 GVF G C T LDHGVV VGYGTENG DYWIVRNSWG  WGE GYI+M RN+  + +GKCGIA+
Sbjct:  239 KNAKVVTIDSYEDVPENSEASLKKALAHQPISVAIEAGGRAFQLYSSGVFDGLCGTELDHGVVAVGYGTENGKDYWIVRNSWGNRWGESGYIKMARNI-EAPTGKCGIAM 347
[Close]
BLAST of rna-XM_014647929.1 vs. Araport11
Match: AT3G19390.1 (| Granulin repeat cysteine protease family protein | Chr3:6723024-6724768 FORWARD LENGTH=452 | 201606)

HSP 1 Score: 123.25 bits (308), Expect = 2.815e-34
Identity = 61/110 (55.45%), Postives = 74/110 (67.27%), Query Frame = 0 
Query:   22 KNAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
            KN +VV+ID YEDV    E +LKK +ANQP                 GVF+G C T LDHGVV VGYG+E G DYWIVRNSWG++WGE GY ++ERN+  S SGKCG+A+
Sbjct:  231 KNTRVVTIDGYEDVPQNDEKSLKKALANQPISVAIEAGGRAFQLYTSGVFTGTCGTSLDHGVVAVGYGSEGGQDYWIVRNSWGSNWGESGYFKLERNIKES-SGKCGVAM 339
[Close]
BLAST of rna-XM_014647929.1 vs. Araport11
Match: AT4G23520.1 (| Cysteine proteinases superfamily protein | Chr4:12274457-12276219 REVERSE LENGTH=356 | 201606)

HSP 1 Score: 107.071 bits (266), Expect = 7.574e-29
Identity = 52/107 (48.60%), Postives = 70/107 (65.42%), Query Frame = 0 
Query:   25 KVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
            KV++IDSYEDV +  E++L+K VA+QP                  +++G C T LDH +V VGYG+ENG DYWIVRNSWG  WG+ GYI++ RN  + + G CGIA+
Sbjct:  238 KVITIDSYEDVPANDEISLQKAVAHQPVSVGVDKKSQEFMLYRSCIYNGPCGTNLDHALVIVGYGSENGQDYWIVRNSWGTTWGDAGYIKIARNFEDPK-GLCGIAM 343
[Close]
BLAST of rna-XM_014647929.1 vs. Araport11
Match: AT3G19400.1 (| Cysteine proteinases superfamily protein | Chr3:6725510-6726878 FORWARD LENGTH=362 | 201606)

HSP 1 Score: 107.071 bits (266), Expect = 9.044e-29
Identity = 53/109 (48.62%), Postives = 70/109 (64.22%), Query Frame = 0 
Query:   23 NAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
            N +VV+ID YEDV    E +LKK VA+QP                 GV +G C   LDHGVV VGYG+ +G DYWI+RNSWG +WG+ GY++++RN+ +   GKCGIA+
Sbjct:  235 NTRVVTIDGYEDVPRDDEKSLKKAVAHQPVSVAIEASSQAFQLYKSGVMTGTCGISLDHGVVVVGYGSTSGEDYWIIRNSWGLNWGDSGYVKLQRNIDDP-FGKCGIAM 342
[Close]
BLAST of rna-XM_014647929.1 vs. Araport11
Match: AT3G48340.1 (| Cysteine proteinases superfamily protein | Chr3:17897739-17899074 FORWARD LENGTH=361 | 201606)

HSP 1 Score: 105.145 bits (261), Expect = 4.441e-28
Identity = 55/109 (50.46%), Postives = 68/109 (62.39%), Query Frame = 0 
Query:   23 NAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
            N  +V+ID +EDV    E AL K VANQP                 GVF+G C T L+HGV  VGYG+E G  YWIVRNSWGA+WGE GYI++ER + +   G+CGIA+
Sbjct:  230 NGVLVTIDGHEDVPENDENALLKAVANQPVSVAIDAGSSDFQFYSEGVFTGSCGTELNHGVAAVGYGSERGKKYWIVRNSWGAEWGEGGYIKIEREI-DEPEGRCGIAM 337
[Close]
BLAST of rna-XM_014647929.1 vs. Araport11
Match: AT4G11310.1 (| Papain family cysteine protease | Chr4:6883594-6885318 FORWARD LENGTH=364 | 201606)

HSP 1 Score: 103.99 bits (258), Expect = 1.363e-27
Identity = 56/110 (50.91%), Postives = 68/110 (61.82%), Query Frame = 0 
Query:   22 KNAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
            +N K V ID YE++ +  E AL K VA+QP                 GVF G C T L+HGVV VGYGTENG DYW+V+NS G  WGE GY++M RN+ N R G CGIA+
Sbjct:  238 ENNKNVMIDGYENLPANDESALMKAVAHQPVTAVIDSSSREFQLYESGVFDGSCGTNLNHGVVVVGYGTENGRDYWLVKNSRGITWGEAGYMKMARNIANPR-GLCGIAM 346
[Close]
BLAST of rna-XM_014647929.1 vs. Araport11
Match: AT4G11320.2 (| Papain family cysteine protease | Chr4:6887336-6888827 FORWARD LENGTH=371 | 201606)

HSP 1 Score: 103.605 bits (257), Expect = 1.812e-27
Identity = 56/110 (50.91%), Postives = 68/110 (61.82%), Query Frame = 0 
Query:   22 KNAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
            ++ K V ID YE++ +  E AL K VA+QP                 GVF G C T L+HGVV VGYGTENG DYWIV+NS G  WGE GY++M RN+ N R G CGIA+
Sbjct:  245 EDNKNVMIDGYENLPANDEAALMKAVAHQPVTAVVDSSSREFQLYESGVFDGTCGTNLNHGVVVVGYGTENGRDYWIVKNSRGDTWGEAGYMKMARNIANPR-GLCGIAM 353
[Close]
BLAST of rna-XM_014647929.1 vs. Araport11
Match: AT4G11320.1 (| Papain family cysteine protease | Chr4:6887336-6888827 FORWARD LENGTH=371 | 201606)

HSP 1 Score: 103.605 bits (257), Expect = 1.812e-27
Identity = 56/110 (50.91%), Postives = 68/110 (61.82%), Query Frame = 0 
Query:   22 KNAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
            ++ K V ID YE++ +  E AL K VA+QP                 GVF G C T L+HGVV VGYGTENG DYWIV+NS G  WGE GY++M RN+ N R G CGIA+
Sbjct:  245 EDNKNVMIDGYENLPANDEAALMKAVAHQPVTAVVDSSSREFQLYESGVFDGTCGTNLNHGVVVVGYGTENGRDYWIVKNSRGDTWGEAGYMKMARNIANPR-GLCGIAM 353
[Close]
BLAST of rna-XM_014647929.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UBL4|A0A1S3UBL4_VIGRR (germination-specific cysteine protease 1-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106763771 PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 8.588e-75
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 
Query:    1 MARGNSLFFLFVSPYSSIFHFKNAKVVSIDSYEDVNSYYELALKKVVANQPGVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
            MARGNSLFFLFVSPYSSIFHFKNAKVVSIDSYEDVNSYYELALKKVVANQPGVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI
Sbjct:    1 MARGNSLFFLFVSPYSSIFHFKNAKVVSIDSYEDVNSYYELALKKVVANQPGVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
[Close]
BLAST of rna-XM_014647929.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RPW9|A0A0S3RPW9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.03G267300 PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 2.300e-48
Identity = 87/110 (79.09%), Postives = 87/110 (79.09%), Query Frame = 0 
Query:   22 KNAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
            KNAKVVSIDSYEDVNSY ELALKK VANQP                 GVFSG C T LDHGVV VGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI
Sbjct:  239 KNAKVVSIDSYEDVNSYDELALKKAVANQPVSVAIEGGGREFQLYSSGVFSGRCGTALDHGVVAVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 348
[Close]
BLAST of rna-XM_014647929.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9V1L0|A0A0L9V1L0_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan07g268400 PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 2.300e-48
Identity = 87/110 (79.09%), Postives = 87/110 (79.09%), Query Frame = 0 
Query:   22 KNAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
            KNAKVVSIDSYEDVNSY ELALKK VANQP                 GVFSG C T LDHGVV VGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI
Sbjct:  239 KNAKVVSIDSYEDVNSYDELALKKAVANQPVSVAIEGGGREFQLYSSGVFSGRCGTALDHGVVAVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 348
[Close]
BLAST of rna-XM_014647929.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MDE5|A0A4D6MDE5_VIGUN (Cysteine peptidase OS=Vigna unguiculata OX=3917 GN=DEO72_LG7g276 PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 4.570e-48
Identity = 83/110 (75.45%), Postives = 85/110 (77.27%), Query Frame = 0 
Query:   22 KNAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
            KNAKVVSIDSYEDV +Y E ALKK VANQP                 GVFSG C T LDHGVV VGYGT+NGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI
Sbjct:    3 KNAKVVSIDSYEDVKAYDESALKKAVANQPVSVAIEGGGREFQLYSSGVFSGRCGTALDHGVVAVGYGTDNGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 112
[Close]
BLAST of rna-XM_014647929.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0F015|A0A3Q0F015_VIGRR (cysteine proteinase RD21A-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106760372 PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 7.967e-48
Identity = 83/110 (75.45%), Postives = 84/110 (76.36%), Query Frame = 0 
Query:   22 KNAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
            KN KVVSIDSYEDVNSY ELALKK VANQP                 GVFSG C T LDHGVV V YGTENGHDYWIVRNSWGADWGEEGYIRMERNLGN+RSGKCGI I
Sbjct:  109 KNVKVVSIDSYEDVNSYDELALKKAVANQPVSVAIEGGRREFQLYSSGVFSGRCGTTLDHGVVAVEYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNNRSGKCGIVI 218
[Close]
BLAST of rna-XM_014647929.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0EI77|A0A3Q0EI77_VIGRR (cysteine proteinase RD21A-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106776827 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.221e-46
Identity = 83/110 (75.45%), Postives = 85/110 (77.27%), Query Frame = 0 
Query:   22 KNAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
            KNAKVVSIDSYEDVNSY ELALKK VANQP                 GVFS  C T LDHGVV V YGT+NGHDYWIVRNSWGADWGEEGYIRMERNLGN+RSGKCGIAI
Sbjct:  110 KNAKVVSIDSYEDVNSYDELALKKAVANQPVSVAIEGGGREFQLYSSGVFSRRCGTTLDHGVVAVEYGTKNGHDYWIVRNSWGADWGEEGYIRMERNLGNNRSGKCGIAI 219
[Close]
BLAST of rna-XM_014647929.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MG50|A0A4D6MG50_VIGUN (Cysteine peptidase OS=Vigna unguiculata OX=3917 GN=DEO72_LG7g275 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.150e-45
Identity = 83/110 (75.45%), Postives = 85/110 (77.27%), Query Frame = 0 
Query:   22 KNAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
            KNAKVVSIDSYEDV +Y E ALKK VANQP                 GVFSG C T LDHGVV VGYGT+NGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI
Sbjct:  239 KNAKVVSIDSYEDVKAYDESALKKAVANQPVSVAIEGGGREFQLYSSGVFSGRCGTALDHGVVAVGYGTDNGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 348
[Close]
BLAST of rna-XM_014647929.1 vs. UniProtKB/TrEMBL
Match: tr|V7CU09|V7CU09_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G024500g PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.370e-45
Identity = 81/110 (73.64%), Postives = 86/110 (78.18%), Query Frame = 0 
Query:   22 KNAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
            KNAKVVSID YEDVN+Y ELALKK VANQP                 GVF+G C T LDHGVV VGYGT+NGHD+WIVRNSWGADWGEEGYIR+ERNLGNSRSGKCGIAI
Sbjct:  239 KNAKVVSIDGYEDVNTYDELALKKAVANQPVSVAVEGGGREFQLYSSGVFTGRCGTALDHGVVAVGYGTDNGHDFWIVRNSWGADWGEEGYIRLERNLGNSRSGKCGIAI 348
[Close]
BLAST of rna-XM_014647929.1 vs. UniProtKB/TrEMBL
Match: tr|O24323|O24323_PHAVU (Cysteine proteinase OS=Phaseolus vulgaris OX=3885 PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.676e-45
Identity = 81/110 (73.64%), Postives = 86/110 (78.18%), Query Frame = 0 
Query:   22 KNAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
            KNAKVVSID YEDVN+Y ELALKK VANQP                 GVF+G C T LDHGVV VGYGT+NGHD+WIVRNSWGADWGEEGYIR+ERNLGNSRSGKCGIAI
Sbjct:  228 KNAKVVSIDGYEDVNTYDELALKKAVANQPVSVAVEGGGREFQLYSSGVFTGRCGTALDHGVVAVGYGTDNGHDFWIVRNSWGADWGEEGYIRLERNLGNSRSGKCGIAI 337
[Close]
BLAST of rna-XM_014647929.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UET3|A0A1S3UET3_VIGRR (low-temperature-induced cysteine proteinase OS=Vigna radiata var. radiata OX=3916 GN=LOC106764715 PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.027e-45
Identity = 84/110 (76.36%), Postives = 84/110 (76.36%), Query Frame = 0 
Query:   22 KNAKVVSIDSYEDVNSYYELALKKVVANQP-----------------GVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMERNLGNSRSGKCGIAI 114
            KNAKVVSID YEDVNSY E ALKK VANQP                 GVFSG C T LDHGVV VGYGTENGHDYWIVRNSWGADWGE GYIRMERNLGNSRSGKCGIAI
Sbjct:  239 KNAKVVSIDDYEDVNSYDESALKKAVANQPVSVAIEGGGREFQLYSSGVFSGRCGTDLDHGVVAVGYGTENGHDYWIVRNSWGADWGEGGYIRMERNLGNSRSGKCGIAI 348
The following BLAST results are available for this feature:
BLAST of rna-XM_014647929.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q94B08|RDL1_ARATH6.795e-3859.46Germination-specific cysteine protease 1 OS=Arabid... [more]
sp|P43297|RD21A_ARATH1.507e-3762.73Cysteine proteinase RD21A OS=Arabidopsis thaliana ... [more]
sp|P25776|ORYA_ORYSJ1.257e-3660.91Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
sp|P25251|CYSP4_BRANA1.614e-3557.66Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
sp|P25777|ORYB_ORYSJ8.262e-3554.47Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
sp|Q9FMH8|RD21B_ARATH4.918e-3459.09Probable cysteine protease RD21B OS=Arabidopsis th... [more]
sp|Q9LT78|RD21C_ARATH2.752e-3355.45Probable cysteine protease RD21C OS=Arabidopsis th... [more]
sp|P20721|CYSPL_SOLLC3.104e-3156.36Low-temperature-induced cysteine proteinase (Fragm... [more]
sp|Q7XR52|CYSP1_ORYSJ7.179e-3151.20Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
sp|P82474|CPGP2_ZINOF5.646e-3051.85Zingipain-2 OS=Zingiber officinale OX=94328 PE=1 S... [more]
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BLAST of rna-XM_014647929.1 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
AT4G36880.17.100e-3959.46| cysteine proteinase1 | Chr4:17374692-17376180 RE... [more]
AT1G47128.11.542e-3862.73| Granulin repeat cysteine protease family protein... [more]
AT5G43060.15.031e-3559.09| Granulin repeat cysteine protease family protein... [more]
AT3G19390.12.815e-3455.45| Granulin repeat cysteine protease family protein... [more]
AT4G23520.17.574e-2948.60| Cysteine proteinases superfamily protein | Chr4:... [more]
AT3G19400.19.044e-2948.62| Cysteine proteinases superfamily protein | Chr3:... [more]
AT3G48340.14.441e-2850.46| Cysteine proteinases superfamily protein | Chr3:... [more]
AT4G11310.11.363e-2750.91| Papain family cysteine protease | Chr4:6883594-6... [more]
AT4G11320.21.812e-2750.91| Papain family cysteine protease | Chr4:6887336-6... [more]
AT4G11320.11.812e-2750.91| Papain family cysteine protease | Chr4:6887336-6... [more]
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BLAST of rna-XM_014647929.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3UBL4|A0A1S3UBL4_VIGRR8.588e-75100.00germination-specific cysteine protease 1-like OS=V... [more]
tr|A0A0S3RPW9|A0A0S3RPW9_PHAAN2.300e-4879.09Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0L9V1L0|A0A0L9V1L0_PHAAN2.300e-4879.09Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A4D6MDE5|A0A4D6MDE5_VIGUN4.570e-4875.45Cysteine peptidase OS=Vigna unguiculata OX=3917 GN... [more]
tr|A0A3Q0F015|A0A3Q0F015_VIGRR7.967e-4875.45cysteine proteinase RD21A-like OS=Vigna radiata va... [more]
tr|A0A3Q0EI77|A0A3Q0EI77_VIGRR1.221e-4675.45cysteine proteinase RD21A-like OS=Vigna radiata va... [more]
tr|A0A4D6MG50|A0A4D6MG50_VIGUN1.150e-4575.45Cysteine peptidase OS=Vigna unguiculata OX=3917 GN... [more]
tr|V7CU09|V7CU09_PHAVU1.370e-4573.64Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|O24323|O24323_PHAVU1.676e-4573.64Cysteine proteinase OS=Phaseolus vulgaris OX=3885 ... [more]
tr|A0A1S3UET3|A0A1S3UET3_VIGRR2.027e-4576.36low-temperature-induced cysteine proteinase OS=Vig... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.10Cysteine proteinasescoord: 13..114
e-value: 3.1E-23
score: 84.7
IPR000668Peptidase C1A, papain C-terminalPFAMPF00112Peptidase_C1coord: 45..113
e-value: 8.4E-21
score: 75.1
IPR013128Peptidase C1APANTHERPTHR12411CYSTEINE PROTEASE FAMILY C1-RELATEDcoord: 24..113
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 21..113

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_014647929.1_VrVC1973A-SNU_v1 ID=rna-XM_014647929.1_VrVC1973A-SNU_v1; Name=rna-XM_014647929.1; organism=Vigna radiata; type=mRNA; length=345bp
ATGGCTCGTGGGAACAGTCTCTTCTTCCTCTTTGTATCTCCATATTCTTC
CATTTTCCATTTTAAAAATGCCAAAGTTGTTTCTATTGATTCTTATGAAG
ATGTTAATTCCTATTATGAGTTAGCATTGAAAAAGGTCGTTGCAAATCAG
CCCGGTGTCTTCTCNGGAANATGTGNAACNNCACTAGATCATGGTGTTGT
GGNNGTTGGGTATGGTACAGAAAACGGTCATGATTATTGGATTGTGAGGA
ATTCATGGGGTGCTGATTGGGGAGAGGAAGGATACATCAGAATGGAAAGA
AATCTGGGTAACAGCAGATCAGGAAAGTGTGGAATTGCGATCTAG
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protein sequence of rna-XM_014647929.1_VrVC1973A-SNU_v1

>rna-XM_014647929.1_VrVC1973A-SNU_v1 ID=rna-XM_014647929.1_VrVC1973A-SNU_v1; Name=rna-XM_014647929.1_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=114bp
MARGNSLFFLFVSPYSSIFHFKNAKVVSIDSYEDVNSYYELALKKVVANQ
PGVFSGXCXTXLDHGVVXVGYGTENGHDYWIVRNSWGADWGEEGYIRMER
NLGNSRSGKCGIAI
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mRNA from alignment at chr06:35652292..35653851+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_014647929.1_VrVC1973A-SNU_v1 ID=rna-XM_014647929.1_VrVC1973A-SNU_v1; Name=rna-XM_014647929.1; organism=Vigna radiata; type=mRNA; length=1560bp; location=Sequence derived from: chr06:35652292..35653851+ (Vigna radiata
ATGGCTCGTGGGAACagtctcttcttcctctttgtATCTCCatattcttc
cattttccattttgtAAGCTTGGGCTCTTTGTGACAATGGAAAGCTAAAC
CCATTTTGTTAAGGGTAGAGATAATCACTAAAATATCTTGTTTGTCAATG
CTTTAAATACATATATGTCTCATCCATTAAATCTTAGTATTCTTGTTTCT
GTACTTAGTGCTTGCTATGATGTGCTCATTCATAGCTTGATGCTAGGTTC
ATTAggtattgaaaaaaatatattagtggAGATGACATgagttatatatg
aaaaatagtGAAGTCGGTAAAatctaatctcaacaatatcAATTCATAAA
TTTTCTAACCTTTTTCAATTCTTAAGTGTCTTCAACTTTCAAAGttcaac
attattatttatGCATCAATTTATTTCATAGTACATAATatcaaattatg
aaattattctTTAGTTTagacactagtacaaaaatcatattttctgacgt
acaaaaacaaactatgaTGTACAtaattttgtacgttataataggtttaC
ATATtatatgacgtagcaaaaatttacattatctgaacatattatgacac
tgtttctaaaatcagtccatttttttatatgaataaattgtttcgaattg
atattgggtaaaattatctatgtttactcaatatcaattcgaaacaattt
attcatataaaaaaatggactgattttagaaacagtgtcataatatgttc
aaatagcataaatttttgctacgtcataaaatatgtagacctattataac
gtacaaaactatatGTACGTCACTTTTGTACGTcatcaaatatgattttt
ttactagtgtataCTGTTGGTCCTGTTGATGGTACATGTGACTAGTATAG
GGTTAGTAACTTGGTCCtgatcttttaagaaaataattgctTCTAAAACA
TAGTTATCAATCAAATTCTTATGttcctttgttttatttgtttattttac
taATGTGCAGAAAAATGCCAAAGTTGTTTCTATTGATTCTTATGAAGATG
TTAATTCCTATTATGAGTTAGCATTGAAAAAGGTCGTTGCAAATCAGCCC
GTGAGCCTTCCTATTgaaggaggaggaagagaattccaatttgattttat
tcatgaCCTGGGAAAAGAAGGTGTGCCTATTACATAGAAAGAAGTAGAAT
AGGAAGATCCAAAGTCCAGAGTTTTGAGTCTAAGTGAAAAACATGTggtt
tattttttgcttttgattAGAACATAAAAACTTCCACTCTTTCCctattc
aattttaaacaaaattggttttgcaatgttgacataattttttaatcagt
atatttcatatttgtcaGGGTGTCTTCTCNGGAANATGTGNAACNNCACT
AGATCATGGTGTTGTGGNNGTTGGGTATGGTACAGAAAACGGTCATGATT
ATTGGATTGTGAGGAATTCATGGGGTGCTGATTGGGGAGAGGAAGGATAC
ATCAGAATGGAAAGAAATCTGGGTAACAGCAGATCAGGAAAGTGTGGAAT
TGCGATCTAG
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Coding sequence (CDS) from alignment at chr06:35652292..35653851+

>rna-XM_014647929.1_VrVC1973A-SNU_v1 ID=rna-XM_014647929.1_VrVC1973A-SNU_v1; Name=rna-XM_014647929.1; organism=Vigna radiata; type=CDS; length=345bp; location=Sequence derived from: chr06:35652292..35653851+ (Vigna radiata
ATGGCTCGTGGGAACagtctcttcttcctctttgtATCTCCatattcttc
cattttccattttAAAAATGCCAAAGTTGTTTCTATTGATTCTTATGAAG
ATGTTAATTCCTATTATGAGTTAGCATTGAAAAAGGTCGTTGCAAATCAG
CCCGGTGTCTTCTCNGGAANATGTGNAACNNCACTAGATCATGGTGTTGT
GGNNGTTGGGTATGGTACAGAAAACGGTCATGATTATTGGATTGTGAGGA
ATTCATGGGGTGCTGATTGGGGAGAGGAAGGATACATCAGAATGGAAAGA
AATCTGGGTAACAGCAGATCAGGAAAGTGTGGAATTGCGATCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000668Peptidase_C1A_C
IPR013128Peptidase_C1A
IPR038765Papain-like_cys_pep_sf
Vocabulary: Molecular Function
TermDefinition
GO:0008234cysteine-type peptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis