rna-XM_022782578.1
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Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_022782578.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FZF1|PX11A_ARATH (Peroxisomal membrane protein 11A OS=Arabidopsis thaliana OX=3702 GN=PEX11A PE=1 SV=1) HSP 1 Score: 307.76 bits (787), Expect = 5.320e-105 Identity = 151/245 (61.63%), Postives = 193/245 (78.78%), Query Frame = 0 Query: 20 PPPSKEQHHRDLLNHIEAYLAKRDGVDKLLKISRYATKLILASSLLQSSNNPALYHRLKSFESSVGVSRKAFRLGKFVQDLNALRASHHHSNRHLLFTLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGYFGSVALKLTDLNIIAEEESCLASSVEISRLRGIGCVEEESRLRKLREKKTMKRLSVIQDLADAVMALDDILDGNGPFSKPVFMASAGLLSALISTHKNWVSC 264
P + RD LNH+E YL+KRDGVDKLLKISRYATK+ILASSL+ + ++ RLKSFESSVGVSRKAFRLGKFVQD+NALR+S SN L+ ++AYGGEG YYFVEQF+WL KSGLID KH++ QK+SAWAELVGY GSV++K+ DL + +EESC+AS++EIS RG+ C E+ +++ ++EKKT+K LS++QDLAD +M + DI DG G S P ++SAGL SA++STHKNW+SC
Sbjct: 6 PEKITKPKDRDFLNHLETYLSKRDGVDKLLKISRYATKIILASSLIPETR--SIIPRLKSFESSVGVSRKAFRLGKFVQDINALRSSRWDSNHELVLLIIAYGGEGLYYFVEQFIWLTKSGLIDAKHSKWLQKISAWAELVGYVGSVSIKIRDLRKLNDEESCVASTIEISVSRGLACDGEDEKMKMIKEKKTLKVLSILQDLADGLMTIADIRDGKGVLSAPNVISSAGLFSAIVSTHKNWISC 248
BLAST of rna-XM_022782578.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q10MN2|PX113_ORYSJ (Peroxisomal membrane protein 11-3 OS=Oryza sativa subsp. japonica OX=39947 GN=PEX11-3 PE=2 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 7.371e-78 Identity = 144/245 (58.78%), Postives = 169/245 (68.98%), Query Frame = 0 Query: 20 PPPSKEQHHRDLLNHIEAYLAKRDGVDKLLKISRYATKLILASSLLQSSNNPALYHRLKSFESSVGVSRKAFRLGKFVQDLNALRASHHHSNRHLLFTLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGYFGSVALKLTDLNIIAEEESCLASSVEISRLRGIGCVEEESRLRKLREKKTMKRLSVIQDLADAVMALDDILDGNGPFSKPVFMASAGLLSALISTHKNWVSC 264
PPP RD L H+EAYL++RDGVDKLLKISRYA +L LA+ L PA RLKSFESSVG+SRKAFRLGKFVQ++NALRA H LLAYGGEG YYF+EQFVWLAK+GL+ Q++SAWAEL+GY GS+ +KL EE L SSV++ RL+ GC EE +R LR K +KR+SV+QD+ADAVMAL D+ DG G MASAGLLSALIS HKNW SC
Sbjct: 20 PPP------RDFLVHVEAYLSRRDGVDKLLKISRYAARLALAAGPLP----PAASARLKSFESSVGLSRKAFRLGKFVQNVNALRAHPHPPPA---VALLAYGGEGVYYFLEQFVWLAKAGLLPAHLLPRLQRLSAWAELLGYVGSITIKL-------EEIGKLESSVKM-RLKE-GCREESDVVRTLRVKLLLKRMSVVQDVADAVMALGDVTDGKGLLGSSTLMASAGLLSALISAHKNWNSC 242
BLAST of rna-XM_022782578.1 vs. UniProtKB/Swiss-Prot
Match: sp|A2XFQ8|PX113_ORYSI (Peroxisomal membrane protein 11-3 OS=Oryza sativa subsp. indica OX=39946 GN=PEX11-3 PE=2 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 7.371e-78 Identity = 144/245 (58.78%), Postives = 169/245 (68.98%), Query Frame = 0 Query: 20 PPPSKEQHHRDLLNHIEAYLAKRDGVDKLLKISRYATKLILASSLLQSSNNPALYHRLKSFESSVGVSRKAFRLGKFVQDLNALRASHHHSNRHLLFTLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGYFGSVALKLTDLNIIAEEESCLASSVEISRLRGIGCVEEESRLRKLREKKTMKRLSVIQDLADAVMALDDILDGNGPFSKPVFMASAGLLSALISTHKNWVSC 264
PPP RD L H+EAYL++RDGVDKLLKISRYA +L LA+ L PA RLKSFESSVG+SRKAFRLGKFVQ++NALRA H LLAYGGEG YYF+EQFVWLAK+GL+ Q++SAWAEL+GY GS+ +KL EE L SSV++ RL+ GC EE +R LR K +KR+SV+QD+ADAVMAL D+ DG G MASAGLLSALIS HKNW SC
Sbjct: 20 PPP------RDFLVHVEAYLSRRDGVDKLLKISRYAARLALAAGPLP----PAASARLKSFESSVGLSRKAFRLGKFVQNVNALRAHPHPPPA---VALLAYGGEGVYYFLEQFVWLAKAGLLPAHLLPRLQRLSAWAELLGYVGSITIKL-------EEIGKLESSVKM-RLKE-GCREESDVVRTLRVKLLLKRMSVVQDVADAVMALGDVTDGKGLLGSSTLMASAGLLSALISAHKNWNSC 242
BLAST of rna-XM_022782578.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q10MN3|PX112_ORYSJ (Peroxisomal membrane protein 11-2 OS=Oryza sativa subsp. japonica OX=39947 GN=PEX11-2 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 1.445e-65 Identity = 121/249 (48.59%), Postives = 158/249 (63.45%), Query Frame = 0 Query: 19 KPPPSKEQHHRDLLNHIEAYLAKRDGVDKLLKISRYATKLILASSLLQSSNNPALYHRLKSFESSVGVSRKAFRLGKFVQDLNALRAS--HHHSNRHLLFTLLAYGGEGFYYFVEQFVWLAKSGLIDPK-HARAFQKVSAWAELVGYFGSVALKLTDLNIIAEEESCLASSVEISRLRGIGCVEEESRLRKLREKKTMKRLSVIQDLADAVMALDDILDGNGPFSKPVFMASAGLLSALISTHKNWVSC 264
KP RD+L HIEAYL++RDGVD LLK+S YA +L LA + Q A RL+SFESSVG+SRKAFRLGKFVQ +NALRA+ H H + H L LLAYGG+G Y F+EQF WLAK+GL+ + R ++ WA+L+ + GS+A+KL + +AE E + + +E GC EE +R L K +K +S++QD+ D+ M + D+ G MASAGLLSALIS HKNW SC
Sbjct: 15 KPASRPRLPCRDILVHIEAYLSRRDGVDNLLKVSLYAARLALALAAGQPPLPHAATARLRSFESSVGLSRKAFRLGKFVQSINALRAAAYHPHPHVHPLLVLLAYGGQGVYNFLEQFAWLAKAGLLPARLLPRRLHRIGVWAQLLAHVGSIAIKLEE---VAELECGVEARLE------EGCGEESEVVRTLSRKLLLKLMSLVQDMVDSAMTVGDVTGRKGLLGSSTLMASAGLLSALISVHKNWNSC 254
BLAST of rna-XM_022782578.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q7XU74|PX114_ORYSJ (Peroxisomal membrane protein 11-4 OS=Oryza sativa subsp. japonica OX=39947 GN=PEX11-4 PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 4.077e-32 Identity = 78/235 (33.19%), Postives = 128/235 (54.47%), Query Frame = 0 Query: 30 DLLNHIEAYLAKRDGVDKLLKISRYATKLILASSLLQSSNNPALYHRLKSFESSVGVSRKAFRLGKFVQDLNALRASHHHSNRHLLFTLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGYFGSVALKLTDLNIIAEEESCLASSVEISRLRGIGCVEEESRLRKLREKKTMKRLSVIQDLADAVMALDDILDGNGPFSK-PVFMASAGLLSALISTHKNWVS 263
D L+ + +LAKRDG+DKL+K +Y +KL + S++P L R K++E+S G+SRKAFR G+F+ LN LR + +LA GE Y+F + F WL++ G++D AR +SA+ E VGY +A+ L + +E L G +++ ++K+R + M+ ++ ++AD V+ + DI + N PF V + +GL+SA ++NW S
Sbjct: 5 DTLDKLVVFLAKRDGIDKLVKTFQYVSKL---AHWAAESSSPGLAGRAKNWETSAGLSRKAFRTGRFLTGLNGLRRAPGEFG---ALAVLANAGEMVYFFFDHFTWLSRVGVLDAWLARRMSFISAFGESVGYVFFIAMDLIMIRRGLRQERKLLRE---------GGKDKDKEVKKIRMDRVMRLMATAANVADLVIGIADI-EPN-PFCNHAVTLGISGLVSAWAGWYRNWPS 222
BLAST of rna-XM_022782578.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q01IH3|PX114_ORYSI (Peroxisomal membrane protein 11-4 OS=Oryza sativa subsp. indica OX=39946 GN=PEX11-4 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 4.077e-32 Identity = 78/235 (33.19%), Postives = 128/235 (54.47%), Query Frame = 0 Query: 30 DLLNHIEAYLAKRDGVDKLLKISRYATKLILASSLLQSSNNPALYHRLKSFESSVGVSRKAFRLGKFVQDLNALRASHHHSNRHLLFTLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGYFGSVALKLTDLNIIAEEESCLASSVEISRLRGIGCVEEESRLRKLREKKTMKRLSVIQDLADAVMALDDILDGNGPFSK-PVFMASAGLLSALISTHKNWVS 263
D L+ + +LAKRDG+DKL+K +Y +KL + S++P L R K++E+S G+SRKAFR G+F+ LN LR + +LA GE Y+F + F WL++ G++D AR +SA+ E VGY +A+ L + +E L G +++ ++K+R + M+ ++ ++AD V+ + DI + N PF V + +GL+SA ++NW S
Sbjct: 5 DTLDKLVVFLAKRDGIDKLVKTFQYVSKL---AHWAAESSSPGLAGRAKNWETSAGLSRKAFRTGRFLTGLNGLRRAPGEFG---ALAVLANAGEMVYFFFDHFTWLSRVGVLDAWLARRMSFISAFGESVGYVFFIAMDLIMIRRGLRQERKLLRE---------GGKDKDKEVKKIRMDRVMRLMATAANVADLVIGIADI-EPN-PFCNHAVTLGISGLVSAWAGWYRNWPS 222
BLAST of rna-XM_022782578.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9STY0|PX11B_ARATH (Peroxisomal membrane protein 11B OS=Arabidopsis thaliana OX=3702 GN=PEX11B PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.252e-22 Identity = 68/235 (28.94%), Postives = 118/235 (50.21%), Query Frame = 0 Query: 30 DLLNHIEAYLAKRDGVDKLLKISRYATKLILASSLLQSSNNPALYHRLKSFESSVGVSRKAFRLGKFVQDLNALRASHHHSNRHLLFTLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGYFGSVALKLTDLNIIAEEESCLASSVEISRLRGIGCVEEESRLRKLREKKTMKRLSVIQDLADAVMALDDILDGNGPFSK-PVFMASAGLLSALISTHKNWVS 263
D ++ + +LAKRDG+DKL+K +Y KL + + P R K +E + G+SRKAFR G+ + NALR + + +LA GE Y+F + F+WL++ G ID K A+ +SA+ E GY + + + + L S + + E +++ ++R M+ + + ++AD ++AL +I PF + + +GL+SA ++NW S
Sbjct: 4 DTVDKLVVFLAKRDGIDKLVKTFQYVAKL---ACWHVEATRPEAADRFKKWEVASGLSRKAFRTGRSLTGFNALRRNPGATPMIRFLAVLANSGEMVYFFFDHFLWLSRIGSIDAKLAKKMSFISAFGESFGYTFFIIIDCIFIKQRLKSLKKLQHSTDEPK------EEIGAKISEIRGDIVMRLMGISANVADLLIALAEI--HPNPFCNHTITLGISGLVSAWAGWYRNWPS 227
BLAST of rna-XM_022782578.1 vs. Araport11
Match: AT1G47750.1 (| peroxin 11A | Chr1:17569388-17570134 REVERSE LENGTH=248 | 201606) HSP 1 Score: 307.76 bits (787), Expect = 5.442e-106 Identity = 151/245 (61.63%), Postives = 193/245 (78.78%), Query Frame = 0 Query: 20 PPPSKEQHHRDLLNHIEAYLAKRDGVDKLLKISRYATKLILASSLLQSSNNPALYHRLKSFESSVGVSRKAFRLGKFVQDLNALRASHHHSNRHLLFTLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGYFGSVALKLTDLNIIAEEESCLASSVEISRLRGIGCVEEESRLRKLREKKTMKRLSVIQDLADAVMALDDILDGNGPFSKPVFMASAGLLSALISTHKNWVSC 264
P + RD LNH+E YL+KRDGVDKLLKISRYATK+ILASSL+ + ++ RLKSFESSVGVSRKAFRLGKFVQD+NALR+S SN L+ ++AYGGEG YYFVEQF+WL KSGLID KH++ QK+SAWAELVGY GSV++K+ DL + +EESC+AS++EIS RG+ C E+ +++ ++EKKT+K LS++QDLAD +M + DI DG G S P ++SAGL SA++STHKNW+SC
Sbjct: 6 PEKITKPKDRDFLNHLETYLSKRDGVDKLLKISRYATKIILASSLIPETR--SIIPRLKSFESSVGVSRKAFRLGKFVQDINALRSSRWDSNHELVLLIIAYGGEGLYYFVEQFIWLTKSGLIDAKHSKWLQKISAWAELVGYVGSVSIKIRDLRKLNDEESCVASTIEISVSRGLACDGEDEKMKMIKEKKTLKVLSILQDLADGLMTIADIRDGKGVLSAPNVISSAGLFSAIVSTHKNWISC 248
BLAST of rna-XM_022782578.1 vs. Araport11
Match: AT3G47430.1 (| peroxin 11B | Chr3:17480798-17481692 FORWARD LENGTH=227 | 201606) HSP 1 Score: 95.9005 bits (237), Expect = 1.281e-23 Identity = 68/235 (28.94%), Postives = 118/235 (50.21%), Query Frame = 0 Query: 30 DLLNHIEAYLAKRDGVDKLLKISRYATKLILASSLLQSSNNPALYHRLKSFESSVGVSRKAFRLGKFVQDLNALRASHHHSNRHLLFTLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGYFGSVALKLTDLNIIAEEESCLASSVEISRLRGIGCVEEESRLRKLREKKTMKRLSVIQDLADAVMALDDILDGNGPFSK-PVFMASAGLLSALISTHKNWVS 263
D ++ + +LAKRDG+DKL+K +Y KL + + P R K +E + G+SRKAFR G+ + NALR + + +LA GE Y+F + F+WL++ G ID K A+ +SA+ E GY + + + + L S + + E +++ ++R M+ + + ++AD ++AL +I PF + + +GL+SA ++NW S
Sbjct: 4 DTVDKLVVFLAKRDGIDKLVKTFQYVAKL---ACWHVEATRPEAADRFKKWEVASGLSRKAFRTGRSLTGFNALRRNPGATPMIRFLAVLANSGEMVYFFFDHFLWLSRIGSIDAKLAKKMSFISAFGESFGYTFFIIIDCIFIKQRLKSLKKLQHSTDEPK------EEIGAKISEIRGDIVMRLMGISANVADLLIALAEI--HPNPFCNHTITLGISGLVSAWAGWYRNWPS 227
BLAST of rna-XM_022782578.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0F2Y7|A0A3Q0F2Y7_VIGRR (peroxisomal membrane protein 11A OS=Vigna radiata var. radiata OX=3916 GN=LOC106764153 PE=3 SV=1) HSP 1 Score: 542.347 bits (1396), Expect = 0.000e+0 Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0 Query: 1 MDSDPKPSTSPAPNPNPSKPPPSKEQHHRDLLNHIEAYLAKRDGVDKLLKISRYATKLILASSLLQSSNNPALYHRLKSFESSVGVSRKAFRLGKFVQDLNALRASHHHSNRHLLFTLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGYFGSVALKLTDLNIIAEEESCLASSVEISRLRGIGCVEEESRLRKLREKKTMKRLSVIQDLADAVMALDDILDGNGPFSKPVFMASAGLLSALISTHKNWVSC 264
MDSDPKPSTSPAPNPNPSKPPPSKEQHHRDLLNHIEAYLAKRDGVDKLLKISRYATKLILASSLLQSSNNPALYHRLKSFESSVGVSRKAFRLGKFVQDLNALRASHHHSNRHLLFTLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGYFGSVALKLTDLNIIAEEESCLASSVEISRLRGIGCVEEESRLRKLREKKTMKRLSVIQDLADAVMALDDILDGNGPFSKPVFMASAGLLSALISTHKNWVSC
Sbjct: 1 MDSDPKPSTSPAPNPNPSKPPPSKEQHHRDLLNHIEAYLAKRDGVDKLLKISRYATKLILASSLLQSSNNPALYHRLKSFESSVGVSRKAFRLGKFVQDLNALRASHHHSNRHLLFTLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGYFGSVALKLTDLNIIAEEESCLASSVEISRLRGIGCVEEESRLRKLREKKTMKRLSVIQDLADAVMALDDILDGNGPFSKPVFMASAGLLSALISTHKNWVSC 264
BLAST of rna-XM_022782578.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RQ79|A0A0S3RQ79_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.03G279100 PE=3 SV=1) HSP 1 Score: 529.635 bits (1363), Expect = 0.000e+0 Identity = 258/264 (97.73%), Postives = 260/264 (98.48%), Query Frame = 0 Query: 1 MDSDPKPSTSPAPNPNPSKPPPSKEQHHRDLLNHIEAYLAKRDGVDKLLKISRYATKLILASSLLQSSNNPALYHRLKSFESSVGVSRKAFRLGKFVQDLNALRASHHHSNRHLLFTLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGYFGSVALKLTDLNIIAEEESCLASSVEISRLRGIGCVEEESRLRKLREKKTMKRLSVIQDLADAVMALDDILDGNGPFSKPVFMASAGLLSALISTHKNWVSC 264
MDSDPK STSPAPNPN SK PPSKEQHHRDLLNH+EAYLAKRDGVDKLLKISRYATKLILASSLLQSSNNPALYHRLKSFESSVGVSRKAFRLGKFVQDLNALRASHHHSNRHLLFTLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGYFGSVALKLTDLNIIAEEESCLASSVEIS LRGIGCVEEESRLRKLREKKTMKRLSV+QDLADAVMALDDILDGNGPFSKPVFMASAGLLSALISTHKNWVSC
Sbjct: 1 MDSDPKSSTSPAPNPNLSKAPPSKEQHHRDLLNHVEAYLAKRDGVDKLLKISRYATKLILASSLLQSSNNPALYHRLKSFESSVGVSRKAFRLGKFVQDLNALRASHHHSNRHLLFTLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGYFGSVALKLTDLNIIAEEESCLASSVEISHLRGIGCVEEESRLRKLREKKTMKRLSVVQDLADAVMALDDILDGNGPFSKPVFMASAGLLSALISTHKNWVSC 264
BLAST of rna-XM_022782578.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TT59|A0A0L9TT59_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g333900 PE=3 SV=1) HSP 1 Score: 529.635 bits (1363), Expect = 0.000e+0 Identity = 258/264 (97.73%), Postives = 260/264 (98.48%), Query Frame = 0 Query: 1 MDSDPKPSTSPAPNPNPSKPPPSKEQHHRDLLNHIEAYLAKRDGVDKLLKISRYATKLILASSLLQSSNNPALYHRLKSFESSVGVSRKAFRLGKFVQDLNALRASHHHSNRHLLFTLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGYFGSVALKLTDLNIIAEEESCLASSVEISRLRGIGCVEEESRLRKLREKKTMKRLSVIQDLADAVMALDDILDGNGPFSKPVFMASAGLLSALISTHKNWVSC 264
MDSDPK STSPAPNPN SK PPSKEQHHRDLLNH+EAYLAKRDGVDKLLKISRYATKLILASSLLQSSNNPALYHRLKSFESSVGVSRKAFRLGKFVQDLNALRASHHHSNRHLLFTLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGYFGSVALKLTDLNIIAEEESCLASSVEIS LRGIGCVEEESRLRKLREKKTMKRLSV+QDLADAVMALDDILDGNGPFSKPVFMASAGLLSALISTHKNWVSC
Sbjct: 1 MDSDPKSSTSPAPNPNLSKAPPSKEQHHRDLLNHVEAYLAKRDGVDKLLKISRYATKLILASSLLQSSNNPALYHRLKSFESSVGVSRKAFRLGKFVQDLNALRASHHHSNRHLLFTLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGYFGSVALKLTDLNIIAEEESCLASSVEISHLRGIGCVEEESRLRKLREKKTMKRLSVVQDLADAVMALDDILDGNGPFSKPVFMASAGLLSALISTHKNWVSC 264
BLAST of rna-XM_022782578.1 vs. UniProtKB/TrEMBL
Match: tr|V7CU25|V7CU25_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G016000g PE=3 SV=1) HSP 1 Score: 498.049 bits (1281), Expect = 1.085e-176 Identity = 240/264 (90.91%), Postives = 249/264 (94.32%), Query Frame = 0 Query: 1 MDSDPKPSTSPAPNPNPSKPPPSKEQHHRDLLNHIEAYLAKRDGVDKLLKISRYATKLILASSLLQSSNNPALYHRLKSFESSVGVSRKAFRLGKFVQDLNALRASHHHSNRHLLFTLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGYFGSVALKLTDLNIIAEEESCLASSVEISRLRGIGCVEEESRLRKLREKKTMKRLSVIQDLADAVMALDDILDGNGPFSKPVFMASAGLLSALISTHKNWVSC 264
MDS+PKPS+SPAPNPNPSK SKEQHHRDLLN IEAYLAKRDGVDKLLKISRYA KLILASSLLQSSNNP L HRLKSFESSVGVSRKAFRLGKFVQDLNALRASH HSNRHLLFTLL YGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGYFGS+ALKL DLN IAEEE+CLASSVEI+RLRG+GC EEESRLRKLREKKTMKRLSV+QDLADA MALDD+LDGN PFSKPVF+ASAGLLSALI THKNWVSC
Sbjct: 40 MDSNPKPSSSPAPNPNPSKAQSSKEQHHRDLLNCIEAYLAKRDGVDKLLKISRYAAKLILASSLLQSSNNPTLSHRLKSFESSVGVSRKAFRLGKFVQDLNALRASHPHSNRHLLFTLLTYGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGYFGSLALKLADLNSIAEEETCLASSVEITRLRGVGCAEEESRLRKLREKKTMKRLSVVQDLADAAMALDDVLDGNAPFSKPVFLASAGLLSALIGTHKNWVSC 303
BLAST of rna-XM_022782578.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MBX0|A0A4D6MBX0_VIGUN (Peroxisomal biogenesis factor 11 OS=Vigna unguiculata OX=3917 GN=DEO72_LG7g167 PE=3 SV=1) HSP 1 Score: 489.574 bits (1259), Expect = 5.706e-174 Identity = 252/264 (95.45%), Postives = 258/264 (97.73%), Query Frame = 0 Query: 1 MDSDPKPSTSPAPNPNPSKPPPSKEQHHRDLLNHIEAYLAKRDGVDKLLKISRYATKLILASSLLQSSNNPALYHRLKSFESSVGVSRKAFRLGKFVQDLNALRASHHHSNRHLLFTLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGYFGSVALKLTDLNIIAEEESCLASSVEISRLRGIGCVEEESRLRKLREKKTMKRLSVIQDLADAVMALDDILDGNGPFSKPVFMASAGLLSALISTHKNWVSC 264
MDSDPKPSTSPAPNPNPSKPPPSKEQHHRDLLNH+EAYLAKRDGVDKLLKISRYATKLILASSLLQSS+NPAL HRLKSFESSVGVSRKAFRLGKFVQDLNALRASH HSNRHLLFTLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGY GSVALKLTDLN IAEEESCLASSVEISRLRG+GCVEE+ RLRKLREKK MKRLSV+QDLADAVMA+DDILDGNGPFSKPVFMASAGLLSALISTHKNWVSC
Sbjct: 1 MDSDPKPSTSPAPNPNPSKPPPSKEQHHRDLLNHVEAYLAKRDGVDKLLKISRYATKLILASSLLQSSDNPALNHRLKSFESSVGVSRKAFRLGKFVQDLNALRASHVHSNRHLLFTLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGYIGSVALKLTDLNTIAEEESCLASSVEISRLRGVGCVEEDYRLRKLREKKIMKRLSVVQDLADAVMAVDDILDGNGPFSKPVFMASAGLLSALISTHKNWVSC 264
BLAST of rna-XM_022782578.1 vs. UniProtKB/TrEMBL
Match: tr|I1MXU8|I1MXU8_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100786784 PE=3 SV=1) HSP 1 Score: 408.297 bits (1048), Expect = 6.307e-142 Identity = 198/240 (82.50%), Postives = 216/240 (90.00%), Query Frame = 0 Query: 25 EQHHRDLLNHIEAYLAKRDGVDKLLKISRYATKLILASSLLQSSNNPALYHRLKSFESSVGVSRKAFRLGKFVQDLNALRASHHHSNRHLLFTLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGYFGSVALKLTDLNIIAEEESCLASSVEISRLRGIGCVEEESRLRKLREKKTMKRLSVIQDLADAVMALDDILDGNGPFSKPVFMASAGLLSALISTHKNWVSC 264
E+H RDLLNH+EAYLAKRDGVDKLLKISRY KLILA+SLLQS NNP L HRLKSFESSVGVSRKAFRLGKFVQDLNAL+ +H HSN L ++LAYGGEG YYFVEQFVWLAKSGLID KH+R FQK+SAWAE VGYFGSVALKL DL IA+EE+CL SSVEI+RLR GCV+EE++L KLR+KKTMKRLSV+QDLADAVMALDD+LDGNGPFSKPV MASAGLLSALISTHKNWVSC
Sbjct: 24 EKHQRDLLNHVEAYLAKRDGVDKLLKISRYTAKLILATSLLQS-NNPTLSHRLKSFESSVGVSRKAFRLGKFVQDLNALKTTHPHSNLDLFLSVLAYGGEGLYYFVEQFVWLAKSGLIDAKHSRKFQKLSAWAEFVGYFGSVALKLGDLGAIAQEEACLKSSVEITRLREGGCVDEEAQLGKLRDKKTMKRLSVVQDLADAVMALDDVLDGNGPFSKPVLMASAGLLSALISTHKNWVSC 262
BLAST of rna-XM_022782578.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445H2W9|A0A445H2W9_GLYSO (Peroxisomal membrane protein 11A OS=Glycine soja OX=3848 GN=D0Y65_037986 PE=3 SV=1) HSP 1 Score: 407.527 bits (1046), Expect = 1.155e-141 Identity = 200/238 (84.03%), Postives = 214/238 (89.92%), Query Frame = 0 Query: 27 HHRDLLNHIEAYLAKRDGVDKLLKISRYATKLILASSLLQSSNNPALYHRLKSFESSVGVSRKAFRLGKFVQDLNALRASHHHSNRHLLFTLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGYFGSVALKLTDLNIIAEEESCLASSVEISRLRGIGCVEEESRLRKLREKKTMKRLSVIQDLADAVMALDDILDGNGPFSKPVFMASAGLLSALISTHKNWVSC 264
H RDLL+H+EAYLAKRDGVDKLLKISRYATKLILASSLLQS NP L HRLKSFESSVGVSRKAFRLGKFVQDLNAL+ +H HS R L +LLAYGGEGFYYFVEQFVWLAKSGLIDPKHAR FQK+SAWAE VGYFGSVALKL DL IA+EE+C+ SSVEI+RLRG GCV+EE RL KLREKK MKRLSV+QDLADAVMALDDILDG GPFSKPV MA AGLLSALIS+HKNW+SC
Sbjct: 24 HQRDLLSHVEAYLAKRDGVDKLLKISRYATKLILASSLLQS--NPTLSHRLKSFESSVGVSRKAFRLGKFVQDLNALKTTHPHSKRQLFLSLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARFFQKLSAWAEFVGYFGSVALKLGDLQEIAKEEACVESSVEITRLRGSGCVDEEVRLGKLREKKMMKRLSVVQDLADAVMALDDILDGKGPFSKPVLMALAGLLSALISSHKNWISC 259
BLAST of rna-XM_022782578.1 vs. UniProtKB/TrEMBL
Match: tr|I1M8F2|I1M8F2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100806011 PE=3 SV=1) HSP 1 Score: 407.527 bits (1046), Expect = 1.155e-141 Identity = 200/238 (84.03%), Postives = 214/238 (89.92%), Query Frame = 0 Query: 27 HHRDLLNHIEAYLAKRDGVDKLLKISRYATKLILASSLLQSSNNPALYHRLKSFESSVGVSRKAFRLGKFVQDLNALRASHHHSNRHLLFTLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGYFGSVALKLTDLNIIAEEESCLASSVEISRLRGIGCVEEESRLRKLREKKTMKRLSVIQDLADAVMALDDILDGNGPFSKPVFMASAGLLSALISTHKNWVSC 264
H RDLL+H+EAYLAKRDGVDKLLKISRYATKLILASSLLQS NP L HRLKSFESSVGVSRKAFRLGKFVQDLNAL+ +H HS R L +LLAYGGEGFYYFVEQFVWLAKSGLIDPKHAR FQK+SAWAE VGYFGSVALKL DL IA+EE+C+ SSVEI+RLRG GCV+EE RL KLREKK MKRLSV+QDLADAVMALDDILDG GPFSKPV MA AGLLSALIS+HKNW+SC
Sbjct: 24 HQRDLLSHVEAYLAKRDGVDKLLKISRYATKLILASSLLQS--NPTLSHRLKSFESSVGVSRKAFRLGKFVQDLNALKTTHPHSKRQLFLSLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARFFQKLSAWAEFVGYFGSVALKLGDLQEIAKEEACVESSVEITRLRGSGCVDEEVRLGKLREKKMMKRLSVVQDLADAVMALDDILDGKGPFSKPVLMALAGLLSALISSHKNWISC 259
BLAST of rna-XM_022782578.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445GBH4|A0A445GBH4_GLYSO (Peroxisomal membrane protein 11A OS=Glycine soja OX=3848 GN=D0Y65_046933 PE=3 SV=1) HSP 1 Score: 407.912 bits (1047), Expect = 1.258e-141 Identity = 198/240 (82.50%), Postives = 217/240 (90.42%), Query Frame = 0 Query: 25 EQHHRDLLNHIEAYLAKRDGVDKLLKISRYATKLILASSLLQSSNNPALYHRLKSFESSVGVSRKAFRLGKFVQDLNALRASHHHSNRHLLFTLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGYFGSVALKLTDLNIIAEEESCLASSVEISRLRGIGCVEEESRLRKLREKKTMKRLSVIQDLADAVMALDDILDGNGPFSKPVFMASAGLLSALISTHKNWVSC 264
E+H RDLLNH+EAYLAKRDGVDKLLKISRY KLILA+SLLQS NNP L HRLKSFESSVGVSRKAFRLGKFVQDLNAL+ +H HSN L ++LAYGGEG YYFVEQFVWLAKSGLID KH+R FQK+SAWAELVGYFGSVALKL DL IA+EE+CL SSVEI+RLR GCV+EE++L KLR+KKTMKRLSV+QDLADAVMALDD+L+GNGPFSKPV MASAGLLSALISTHKNWVSC
Sbjct: 32 EKHQRDLLNHVEAYLAKRDGVDKLLKISRYTAKLILATSLLQS-NNPTLSHRLKSFESSVGVSRKAFRLGKFVQDLNALKTTHPHSNLDLFLSVLAYGGEGLYYFVEQFVWLAKSGLIDAKHSRKFQKLSAWAELVGYFGSVALKLGDLGAIAKEEACLKSSVEITRLREGGCVDEEAQLGKLRDKKTMKRLSVVQDLADAVMALDDVLNGNGPFSKPVLMASAGLLSALISTHKNWVSC 270
BLAST of rna-XM_022782578.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151TYZ1|A0A151TYZ1_CAJCA (Peroxisomal membrane protein 11A OS=Cajanus cajan OX=3821 GN=KK1_004877 PE=3 SV=1) HSP 1 Score: 380.948 bits (977), Expect = 3.374e-131 Identity = 191/242 (78.93%), Postives = 214/242 (88.43%), Query Frame = 0 Query: 25 EQHHRDLLNHIEAYLAKRDGVDKLLKISRYATKLILASSLLQSSNNPALYHRLKSFESSVGVSRKAFRLGKFVQDLNALRAS-HHHSNRH-LLFTLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARAFQKVSAWAELVGYFGSVALKLTDLNIIAEEESCLASSVEISRLRGIGCVEEESRLRKLREKKTMKRLSVIQDLADAVMALDDILDGNGPFSKPVFMASAGLLSALISTHKNWVSC 264
++HHRDLLNH+EAYLAKRDGVDKLLKISRYATKLILASSLL SS+ PAL RLK+FESSVGVSRKAFRLGKFVQDLNALR S HH +RH LL +LLAYGGEG YYF+EQFVWLAKSGLIDP AR+ QKVSAWAEL+GY GS+ALK+ DL +AEEE+CL+S++EIS LRG+ C EEE RLRKLREKK MKRLSV+QDLADA+MA+DDILDG FS P+ MASAGLLSALISTHKNW+SC
Sbjct: 18 KEHHRDLLNHVEAYLAKRDGVDKLLKISRYATKLILASSLLHSSD-PALTRRLKAFESSVGVSRKAFRLGKFVQDLNALRTSDHHQQHRHRLLLSLLAYGGEGLYYFLEQFVWLAKSGLIDPSRARSLQKVSAWAELLGYVGSIALKVGDLRAMAEEETCLSSTLEISELRGVSCAEEEGRLRKLREKKLMKRLSVVQDLADAIMAVDDILDGKSSFSNPILMASAGLLSALISTHKNWLSC 258 The following BLAST results are available for this feature:
BLAST of rna-XM_022782578.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot) Total hits: 7 Position : 0 Zoom : x 1
BLAST of rna-XM_022782578.1 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11) Total hits: 2 Position : 0 Zoom : x 1
BLAST of rna-XM_022782578.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_022782578.1_VrVC1973A-SNU_v1 ID=rna-XM_022782578.1_VrVC1973A-SNU_v1; Name=rna-XM_022782578.1; organism=Vigna radiata; type=mRNA; length=795bpback to top protein sequence of rna-XM_022782578.1_VrVC1973A-SNU_v1 >rna-XM_022782578.1_VrVC1973A-SNU_v1 ID=rna-XM_022782578.1_VrVC1973A-SNU_v1; Name=rna-XM_022782578.1_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=264bpback to top mRNA from alignment at chr06:35897157..35898648+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_022782578.1_VrVC1973A-SNU_v1 ID=rna-XM_022782578.1_VrVC1973A-SNU_v1; Name=rna-XM_022782578.1; organism=Vigna radiata; type=mRNA; length=1492bp; location=Sequence derived from: chr06:35897157..35898648+ (Vigna radiataback to top Coding sequence (CDS) from alignment at chr06:35897157..35898648+ >rna-XM_022782578.1_VrVC1973A-SNU_v1 ID=rna-XM_022782578.1_VrVC1973A-SNU_v1; Name=rna-XM_022782578.1; organism=Vigna radiata; type=CDS; length=795bp; location=Sequence derived from: chr06:35897157..35898648+ (Vigna radiataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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