rna-XM_014651444.2

Transcript Overview
Namerna-XM_014651444.2
Unique Namerna-XM_014651444.2_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length957
Productuncharacterized LOC106766715
References
External references for this mRNA
DatabaseAccession
GeneID106766715
GenbankXM_014651444.2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr07chromosomechr07:20376521..20378681 +Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
asvrvL080Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0247Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvrvL446Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0737Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivrvL562Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivrvL677Cicer arietinum ICC 4958 genome v2Cicer arietinum
ccvrvL0038Cajanus cajan Asha genome v1.0Cajanus cajan
ccvrvL0223Cajanus cajan Asha genome v1.0Cajanus cajan
ccvrvL0224Cajanus cajan Asha genome v1.0Cajanus cajan
crvrvL525Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvrvL817Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvrvL055Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvrvL477Pisum sativum Cameor genome v1aPisum sativum
pvvrvL237Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvrvL679Pisum sativum Cameor genome v1aPisum sativum
psvrvL712Pisum sativum Cameor genome v1aPisum sativum
tifvrvL299Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL691Vicia faba cv. Tiffany genome v1.0Vicia faba
vrvvrvL119Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvL310Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvrvL705Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvrvL717Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvssR664Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR693Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvuaR475Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvzwsR579Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvzwsR596Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuR510Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuaR489Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvrvL439Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL530Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvrvL240Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL384Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvrvL436Cicer arietinum
carvrvL520Cicer arietinum
ccavrvL063Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL740Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL750Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vrvvumR522Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR603Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvvaR659Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR682Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvstR524Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR594Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvrvL084Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL392Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvrvL046Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL228Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL252Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vrvvunR479Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Ca_16316.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vigun03g170900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-TanjilR_09105Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
evm.model.Chr03.3706Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-KK1_025184Cajanus cajan Asha genome v1.0Cajanus cajan
Psat7g079200.1Pisum sativum Cameor genome v1aPisum sativum
Va01G038220.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
XM_058875849.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Cr_21892.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Psat07G0200300-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
PvulFLAVERTChr02.999Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigun03g170900.4Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vum_01G01529.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigan.01G197200.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Cc_v2.0_22009.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
LR48_mrnaVigan01g093000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-XM_027336197.1Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
jg30376.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106766715gene-LOC106766715_VrVC1973A-SNU_v1Vigna radiatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_014651444.2-1exon-XM_014651444.2-1_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014651444.2-2exon-XM_014651444.2-2_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_014506930.1cds-XP_014506930.1_VrVC1973A-SNU_v1Vigna radiataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_014651444.2_VrVC1973A-SNU_v1rna-XM_014651444.2_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_014651444.2_VrVC1973A-SNU_v1rna-XM_014651444.2_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


Homology
[Close]
BLAST of rna-XM_014651444.2 vs. Araport11
Match: AT1G67660.2 (| Restriction endonuclease%2C type II-like superfamily protein | Chr1:25364152-25365069 FORWARD LENGTH=305 | 201606)

HSP 1 Score: 372.474 bits (955), Expect = 1.049e-129
Identity = 177/280 (63.21%), Postives = 218/280 (77.86%), Query Frame = 0 
Query:   39 RIFSTCASPFTSTVDPIIVHSSQFQVLASNLSAASVPQRSEEWFALRKDKLTTSTFSTALGFWKGGRRGELWHEKVFASEAQIMEVSKNSAMEWGTLNEAVAIEQYKKITGNEVSSMGFVVHSKQSYDWLGASPDGVLRGSPEVGLLEVKCPYNKGKPEAGLPWSSMPFYYMPQVQGQMEIMDCEWVDLYCWMPNGSTIFRVLRQREYWNLIHEILREFWWENVVPAREVLLLGRE-EEVKSYKPASTHKKTGLAIAKSIKLASETKLLCRELAGHIEFF 317
            R  ST  S  T T+ P   H     +++S LS + +PQ+SEEWFALRKDKLTTSTFSTALGFWKG RR ELWHEKV+ S+A+++E S   AM WG   E+ AIE+YK+I G EV +MGF +HS + + WLGASPDG+L      G+LEVKCPYNKGK E  LPW  +P+YYMPQ+QGQMEIMD EWV+LYCW  NGST+FRV+R R YW +IH++LREFWWE+V+PARE LLLG+E EEVK Y+P STHK+T LAIAKS+ LA+E+KL+CRE+A H+EFF
Sbjct:   30 RFSSTALSLITQTISPF-AHPRSSVIVSSLLSPSDIPQKSEEWFALRKDKLTTSTFSTALGFWKGNRRAELWHEKVYDSDARVVEESARFAMNWGVQMESSAIERYKRIMGCEVGTMGFAIHSNEEFHWLGASPDGILDC---FGILEVKCPYNKGKTETVLPWKKVPYYYMPQLQGQMEIMDREWVNLYCWTRNGSTVFRVMRDRSYWRIIHDVLREFWWESVIPAREALLLGKEDEEVKKYEPTSTHKRTKLAIAKSLNLAAESKLVCREIADHVEFF 305
[Close]
BLAST of rna-XM_014651444.2 vs. Araport11
Match: AT1G67660.3 (| Restriction endonuclease%2C type II-like superfamily protein | Chr1:25364065-25365069 FORWARD LENGTH=334 | 201606)

HSP 1 Score: 372.859 bits (956), Expect = 2.075e-129
Identity = 177/280 (63.21%), Postives = 218/280 (77.86%), Query Frame = 0 
Query:   39 RIFSTCASPFTSTVDPIIVHSSQFQVLASNLSAASVPQRSEEWFALRKDKLTTSTFSTALGFWKGGRRGELWHEKVFASEAQIMEVSKNSAMEWGTLNEAVAIEQYKKITGNEVSSMGFVVHSKQSYDWLGASPDGVLRGSPEVGLLEVKCPYNKGKPEAGLPWSSMPFYYMPQVQGQMEIMDCEWVDLYCWMPNGSTIFRVLRQREYWNLIHEILREFWWENVVPAREVLLLGRE-EEVKSYKPASTHKKTGLAIAKSIKLASETKLLCRELAGHIEFF 317
            R  ST  S  T T+ P   H     +++S LS + +PQ+SEEWFALRKDKLTTSTFSTALGFWKG RR ELWHEKV+ S+A+++E S   AM WG   E+ AIE+YK+I G EV +MGF +HS + + WLGASPDG+L      G+LEVKCPYNKGK E  LPW  +P+YYMPQ+QGQMEIMD EWV+LYCW  NGST+FRV+R R YW +IH++LREFWWE+V+PARE LLLG+E EEVK Y+P STHK+T LAIAKS+ LA+E+KL+CRE+A H+EFF
Sbjct:   59 RFSSTALSLITQTISPF-AHPRSSVIVSSLLSPSDIPQKSEEWFALRKDKLTTSTFSTALGFWKGNRRAELWHEKVYDSDARVVEESARFAMNWGVQMESSAIERYKRIMGCEVGTMGFAIHSNEEFHWLGASPDGILDC---FGILEVKCPYNKGKTETVLPWKKVPYYYMPQLQGQMEIMDREWVNLYCWTRNGSTVFRVMRDRSYWRIIHDVLREFWWESVIPAREALLLGKEDEEVKKYEPTSTHKRTKLAIAKSLNLAAESKLVCREIADHVEFF 334
[Close]
BLAST of rna-XM_014651444.2 vs. Araport11
Match: AT1G67660.1 (| Restriction endonuclease%2C type II-like superfamily protein | Chr1:25363587-25365069 FORWARD LENGTH=355 | 201606)

HSP 1 Score: 372.474 bits (955), Expect = 4.681e-129
Identity = 177/280 (63.21%), Postives = 218/280 (77.86%), Query Frame = 0 
Query:   39 RIFSTCASPFTSTVDPIIVHSSQFQVLASNLSAASVPQRSEEWFALRKDKLTTSTFSTALGFWKGGRRGELWHEKVFASEAQIMEVSKNSAMEWGTLNEAVAIEQYKKITGNEVSSMGFVVHSKQSYDWLGASPDGVLRGSPEVGLLEVKCPYNKGKPEAGLPWSSMPFYYMPQVQGQMEIMDCEWVDLYCWMPNGSTIFRVLRQREYWNLIHEILREFWWENVVPAREVLLLGRE-EEVKSYKPASTHKKTGLAIAKSIKLASETKLLCRELAGHIEFF 317
            R  ST  S  T T+ P   H     +++S LS + +PQ+SEEWFALRKDKLTTSTFSTALGFWKG RR ELWHEKV+ S+A+++E S   AM WG   E+ AIE+YK+I G EV +MGF +HS + + WLGASPDG+L      G+LEVKCPYNKGK E  LPW  +P+YYMPQ+QGQMEIMD EWV+LYCW  NGST+FRV+R R YW +IH++LREFWWE+V+PARE LLLG+E EEVK Y+P STHK+T LAIAKS+ LA+E+KL+CRE+A H+EFF
Sbjct:   80 RFSSTALSLITQTISPF-AHPRSSVIVSSLLSPSDIPQKSEEWFALRKDKLTTSTFSTALGFWKGNRRAELWHEKVYDSDARVVEESARFAMNWGVQMESSAIERYKRIMGCEVGTMGFAIHSNEEFHWLGASPDGILDC---FGILEVKCPYNKGKTETVLPWKKVPYYYMPQLQGQMEIMDREWVNLYCWTRNGSTVFRVMRDRSYWRIIHDVLREFWWESVIPAREALLLGKEDEEVKKYEPTSTHKRTKLAIAKSLNLAAESKLVCREIADHVEFF 355
[Close]
BLAST of rna-XM_014651444.2 vs. Araport11
Match: AT1G13810.1 (| Restriction endonuclease%2C type II-like superfamily protein | Chr1:4734088-4735164 FORWARD LENGTH=303 | 201606)

HSP 1 Score: 166.777 bits (421), Expect = 2.807e-49
Identity = 90/247 (36.44%), Postives = 141/247 (57.09%), Query Frame = 0 
Query:   79 EEWFALRKDKLTTSTFSTALGFWKGGRRGELWHEKVFASEAQIMEVSKNSAMEWGTLNEAVAIEQYKKITGNEVSSMGFVVHSK---QSYDWLGASPDGVLR----GSPEVGLLEVKCPYNKGKPEAGLPWSSMPFYYMPQVQGQMEIMDCEWVDLYCWMPNGSTIFRVLRQREYWNLIHEILREFWWENVVPAREVL----LLGREEEVKSYKPASTHKKTGLAIAKSIKLASETKLLCRELAGHI 314
            + W  LRK++LT S F+ A+GF   GRR  LW EK+ A++      + N A  W   NE  A+E+Y ++TGNE+    FVV+        +WLGASPDGV+     G    G+LEVKCP++        PW  +P+  +PQ+QG MEI+D +W+DLYCW  NGS++FRV R   +W  +   L +FW  +V+PARE+     +   + +++ +KP   H+     +  + ++++    L  E+ G++
Sbjct:   60 KNWEDLRKNRLTASNFARAIGFSPDGRRN-LWLEKIGAAKP----FAGNRATFWDIENEVEALERYNELTGNEILIPEFVVYKNGESPEENWLGASPDGVINVVKDGVTSCGVLEVKCPFDNRDNSKVYPWKKVPYNCVPQLQGLMEIVDTDWLDLYCWTRNGSSLFRVWRDTAFWEDMKPALFDFWQNHVLPAREIYNNFDIKDPQVKLREFKPKHWHEDCKKIMRGAERISANANRLFYEIDGNL 301
[Close]
BLAST of rna-XM_014651444.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3ULR2|A0A1S3ULR2_VIGRR (uncharacterized protein LOC106766715 OS=Vigna radiata var. radiata OX=3916 GN=LOC106766715 PE=4 SV=1)

HSP 1 Score: 661.759 bits (1706), Expect = 0.000e+0
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0 
Query:    1 MEMTMSATTCYSMIRFSGVLRTTFVSPYPNRKCAKRVVRIFSTCASPFTSTVDPIIVHSSQFQVLASNLSAASVPQRSEEWFALRKDKLTTSTFSTALGFWKGGRRGELWHEKVFASEAQIMEVSKNSAMEWGTLNEAVAIEQYKKITGNEVSSMGFVVHSKQSYDWLGASPDGVLRGSPEVGLLEVKCPYNKGKPEAGLPWSSMPFYYMPQVQGQMEIMDCEWVDLYCWMPNGSTIFRVLRQREYWNLIHEILREFWWENVVPAREVLLLGREEEVKSYKPASTHKKTGLAIAKSIKLASETKLLCRELAGHIEFFS 318
            MEMTMSATTCYSMIRFSGVLRTTFVSPYPNRKCAKRVVRIFSTCASPFTSTVDPIIVHSSQFQVLASNLSAASVPQRSEEWFALRKDKLTTSTFSTALGFWKGGRRGELWHEKVFASEAQIMEVSKNSAMEWGTLNEAVAIEQYKKITGNEVSSMGFVVHSKQSYDWLGASPDGVLRGSPEVGLLEVKCPYNKGKPEAGLPWSSMPFYYMPQVQGQMEIMDCEWVDLYCWMPNGSTIFRVLRQREYWNLIHEILREFWWENVVPAREVLLLGREEEVKSYKPASTHKKTGLAIAKSIKLASETKLLCRELAGHIEFFS
Sbjct:    1 MEMTMSATTCYSMIRFSGVLRTTFVSPYPNRKCAKRVVRIFSTCASPFTSTVDPIIVHSSQFQVLASNLSAASVPQRSEEWFALRKDKLTTSTFSTALGFWKGGRRGELWHEKVFASEAQIMEVSKNSAMEWGTLNEAVAIEQYKKITGNEVSSMGFVVHSKQSYDWLGASPDGVLRGSPEVGLLEVKCPYNKGKPEAGLPWSSMPFYYMPQVQGQMEIMDCEWVDLYCWMPNGSTIFRVLRQREYWNLIHEILREFWWENVVPAREVLLLGREEEVKSYKPASTHKKTGLAIAKSIKLASETKLLCRELAGHIEFFS 318
[Close]
BLAST of rna-XM_014651444.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3R188|A0A0S3R188_PHAAN (YqaJ domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G197200 PE=4 SV=1)

HSP 1 Score: 649.432 bits (1674), Expect = 0.000e+0
Identity = 311/318 (97.80%), Postives = 315/318 (99.06%), Query Frame = 0 
Query:    1 MEMTMSATTCYSMIRFSGVLRTTFVSPYPNRKCAKRVVRIFSTCASPFTSTVDPIIVHSSQFQVLASNLSAASVPQRSEEWFALRKDKLTTSTFSTALGFWKGGRRGELWHEKVFASEAQIMEVSKNSAMEWGTLNEAVAIEQYKKITGNEVSSMGFVVHSKQSYDWLGASPDGVLRGSPEVGLLEVKCPYNKGKPEAGLPWSSMPFYYMPQVQGQMEIMDCEWVDLYCWMPNGSTIFRVLRQREYWNLIHEILREFWWENVVPAREVLLLGREEEVKSYKPASTHKKTGLAIAKSIKLASETKLLCRELAGHIEFFS 318
            MEMTMSATTCYSMIRFS VLRTTFVSPYPNRKCAKRV+RIFSTCASP TSTVDPIIVHSSQFQVLASNLSAA+VPQRSEEWFALRKDKLTTSTFSTALGFWKGGRRGELWHEKVFASEAQIMEVSKNSAMEWGTLNE+VAIEQYKKITGNEVSSMGFVVHSKQSYDWLGASPDGVLR SP+VGLLEVKCPYNKGKPEAGLPWSSMPFYYMPQVQGQMEIMDCEWVDLYCWMPNGSTIFRVLRQREYWNLIHEILREFWWENVVPAREVLLLGREEEVKSYKPASTHKKTGLAIAKSIKLASETKLLCRELAGHIEFFS
Sbjct:    1 MEMTMSATTCYSMIRFSDVLRTTFVSPYPNRKCAKRVLRIFSTCASPITSTVDPIIVHSSQFQVLASNLSAANVPQRSEEWFALRKDKLTTSTFSTALGFWKGGRRGELWHEKVFASEAQIMEVSKNSAMEWGTLNESVAIEQYKKITGNEVSSMGFVVHSKQSYDWLGASPDGVLRCSPQVGLLEVKCPYNKGKPEAGLPWSSMPFYYMPQVQGQMEIMDCEWVDLYCWMPNGSTIFRVLRQREYWNLIHEILREFWWENVVPAREVLLLGREEEVKSYKPASTHKKTGLAIAKSIKLASETKLLCRELAGHIEFFS 318
[Close]
BLAST of rna-XM_014651444.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TLE3|A0A0L9TLE3_PHAAN (YqaJ domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g093000 PE=4 SV=1)

HSP 1 Score: 649.432 bits (1674), Expect = 0.000e+0
Identity = 311/318 (97.80%), Postives = 315/318 (99.06%), Query Frame = 0 
Query:    1 MEMTMSATTCYSMIRFSGVLRTTFVSPYPNRKCAKRVVRIFSTCASPFTSTVDPIIVHSSQFQVLASNLSAASVPQRSEEWFALRKDKLTTSTFSTALGFWKGGRRGELWHEKVFASEAQIMEVSKNSAMEWGTLNEAVAIEQYKKITGNEVSSMGFVVHSKQSYDWLGASPDGVLRGSPEVGLLEVKCPYNKGKPEAGLPWSSMPFYYMPQVQGQMEIMDCEWVDLYCWMPNGSTIFRVLRQREYWNLIHEILREFWWENVVPAREVLLLGREEEVKSYKPASTHKKTGLAIAKSIKLASETKLLCRELAGHIEFFS 318
            MEMTMSATTCYSMIRFS VLRTTFVSPYPNRKCAKRV+RIFSTCASP TSTVDPIIVHSSQFQVLASNLSAA+VPQRSEEWFALRKDKLTTSTFSTALGFWKGGRRGELWHEKVFASEAQIMEVSKNSAMEWGTLNE+VAIEQYKKITGNEVSSMGFVVHSKQSYDWLGASPDGVLR SP+VGLLEVKCPYNKGKPEAGLPWSSMPFYYMPQVQGQMEIMDCEWVDLYCWMPNGSTIFRVLRQREYWNLIHEILREFWWENVVPAREVLLLGREEEVKSYKPASTHKKTGLAIAKSIKLASETKLLCRELAGHIEFFS
Sbjct:    1 MEMTMSATTCYSMIRFSDVLRTTFVSPYPNRKCAKRVLRIFSTCASPITSTVDPIIVHSSQFQVLASNLSAANVPQRSEEWFALRKDKLTTSTFSTALGFWKGGRRGELWHEKVFASEAQIMEVSKNSAMEWGTLNESVAIEQYKKITGNEVSSMGFVVHSKQSYDWLGASPDGVLRCSPQVGLLEVKCPYNKGKPEAGLPWSSMPFYYMPQVQGQMEIMDCEWVDLYCWMPNGSTIFRVLRQREYWNLIHEILREFWWENVVPAREVLLLGREEEVKSYKPASTHKKTGLAIAKSIKLASETKLLCRELAGHIEFFS 318
[Close]
BLAST of rna-XM_014651444.2 vs. UniProtKB/TrEMBL
Match: tr|V7CKL5|V7CKL5_PHAVU (YqaJ domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G176700g PE=4 SV=1)

HSP 1 Score: 585.104 bits (1507), Expect = 0.000e+0
Identity = 282/318 (88.68%), Postives = 295/318 (92.77%), Query Frame = 0 
Query:    1 MEMTMSATTCYSMIRFSGVLRTTFVSPYPNRKCAKRVVRIFSTCASPFTSTVDPIIVHSSQFQVLASNLSAASVPQRSEEWFALRKDKLTTSTFSTALGFWKGGRRGELWHEKVFASEAQIMEVSKNSAMEWGTLNEAVAIEQYKKITGNEVSSMGFVVHSKQSYDWLGASPDGVLRGSPEVGLLEVKCPYNKGKPEAGLPWSSMPFYYMPQVQGQMEIMDCEWVDLYCWMPNGSTIFRVLRQREYWNLIHEILREFWWENVVPAREVLLLGREEEVKSYKPASTHKKTGLAIAKSIKLASETKLLCRELAGHIEFFS 318
            MEMTMSAT+CYSMIRFSGVLRTT  SPYP RK A RV+R FS CASPFTS +DPIIV SS FQVLASNL  A+VPQRSEEWFALRKD+LTTSTFSTALGFWKG RR ELW EKVFASEAQIMEVS+NSAM WGT+NEAVAIEQYKKITGNEV SMGF VHSKQSYDWLGASPDGVL  SP+ GLLEVKCPYNKGKPEAGLPWS++PFYYMPQVQGQMEIMDCEWVDLYCWMPNGSTIFRV R+REYWNLIHEILREFWWENV+PAREVLLLGREEEVKSYKPASTH KTGLAIAKSIKLASETKLLCRE+AGHIEFFS
Sbjct:    1 MEMTMSATSCYSMIRFSGVLRTT--SPYPKRKHANRVLRKFSICASPFTSILDPIIVQSSPFQVLASNLGTANVPQRSEEWFALRKDRLTTSTFSTALGFWKGSRRLELWQEKVFASEAQIMEVSRNSAMAWGTVNEAVAIEQYKKITGNEVGSMGFAVHSKQSYDWLGASPDGVLGCSPDGGLLEVKCPYNKGKPEAGLPWSTIPFYYMPQVQGQMEIMDCEWVDLYCWMPNGSTIFRVRREREYWNLIHEILREFWWENVIPAREVLLLGREEEVKSYKPASTHNKTGLAIAKSIKLASETKLLCREVAGHIEFFS 316
[Close]
BLAST of rna-XM_014651444.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445JCE3|A0A445JCE3_GLYSO (YqaJ domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_020133 PE=4 SV=1)

HSP 1 Score: 549.666 bits (1415), Expect = 0.000e+0
Identity = 263/318 (82.70%), Postives = 282/318 (88.68%), Query Frame = 0 
Query:    1 MEMTMSATTCYSMIRFSGVLRTTFVSPYPNRKCAKRVVRIFSTCASPFTSTVDPIIVHSSQFQVLASNLSAASVPQRSEEWFALRKDKLTTSTFSTALGFWKGGRRGELWHEKVFASEAQIMEVSKNSAMEWGTLNEAVAIEQYKKITGNEVSSMGFVVHSKQSYDWLGASPDGVLRGSPEVGLLEVKCPYNKGKPEAGLPWSSMPFYYMPQVQGQMEIMDCEWVDLYCWMPNGSTIFRVLRQREYWNLIHEILREFWWENVVPAREVLLLGREEEVKSYKPASTHKKTGLAIAKSIKLASETKLLCRELAGHIEFFS 318
            MEMTMSA TC +M RFSG+LRTT VS  P RK AK ++R F+ CASPF S+VDPIIV+S  FQVLASNLS A VPQRSEEWFALRKDKLTTSTF TALGFWKG RR ELW EKVFASEAQIM    N+AM WGTL EAVA+EQYKKITGNEVSSMGF VHSKQS DWLGASPDGVL   P++G+LEVKCPYNKGKPEAGLPWS MPFYYMPQVQGQMEIMDCEWVDLYCW PNGSTIFRVLR+REYWNLIH++LREFWWENVVPARE LLLGREEEVKSYKPASTH+KTG+AIAKSIKLA ETKL CRELAGH+EF+S
Sbjct:    1 MEMTMSAATCSNMTRFSGILRTTCVSSSPKRKHAKGILRNFTICASPFISSVDPIIVNSPSFQVLASNLSLADVPQRSEEWFALRKDKLTTSTFGTALGFWKGSRRPELWQEKVFASEAQIM--GANNAMAWGTLKEAVAVEQYKKITGNEVSSMGFAVHSKQSCDWLGASPDGVLGCPPQLGILEVKCPYNKGKPEAGLPWSKMPFYYMPQVQGQMEIMDCEWVDLYCWTPNGSTIFRVLREREYWNLIHDMLREFWWENVVPAREALLLGREEEVKSYKPASTHQKTGVAIAKSIKLAQETKLFCRELAGHVEFYS 316
[Close]
BLAST of rna-XM_014651444.2 vs. UniProtKB/TrEMBL
Match: tr|I1KRY7|I1KRY7_SOYBN (YqaJ domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_08G101400 PE=4 SV=1)

HSP 1 Score: 549.666 bits (1415), Expect = 0.000e+0
Identity = 263/318 (82.70%), Postives = 282/318 (88.68%), Query Frame = 0 
Query:    1 MEMTMSATTCYSMIRFSGVLRTTFVSPYPNRKCAKRVVRIFSTCASPFTSTVDPIIVHSSQFQVLASNLSAASVPQRSEEWFALRKDKLTTSTFSTALGFWKGGRRGELWHEKVFASEAQIMEVSKNSAMEWGTLNEAVAIEQYKKITGNEVSSMGFVVHSKQSYDWLGASPDGVLRGSPEVGLLEVKCPYNKGKPEAGLPWSSMPFYYMPQVQGQMEIMDCEWVDLYCWMPNGSTIFRVLRQREYWNLIHEILREFWWENVVPAREVLLLGREEEVKSYKPASTHKKTGLAIAKSIKLASETKLLCRELAGHIEFFS 318
            MEMTMSA TC +M RFSG+LRTT VS  P RK AK ++R F+ CASPF S+VDPIIV+S  FQVLASNLS A VPQRSEEWFALRKDKLTTSTF TALGFWKG RR ELW EKVFASEAQIM    N+AM WGTL EAVA+EQYKKITGNEVSSMGF VHSKQS DWLGASPDGVL   P++G+LEVKCPYNKGKPEAGLPWS MPFYYMPQVQGQMEIMDCEWVDLYCW PNGSTIFRVLR+REYWNLIH++LREFWWENVVPARE LLLGREEEVKSYKPASTH+KTG+AIAKSIKLA ETKL CRELAGH+EF+S
Sbjct:    1 MEMTMSAATCSNMTRFSGILRTTCVSSSPKRKHAKGILRNFTICASPFISSVDPIIVNSPSFQVLASNLSLADVPQRSEEWFALRKDKLTTSTFGTALGFWKGSRRPELWQEKVFASEAQIM--GANNAMAWGTLKEAVAVEQYKKITGNEVSSMGFAVHSKQSCDWLGASPDGVLGCPPQLGILEVKCPYNKGKPEAGLPWSKMPFYYMPQVQGQMEIMDCEWVDLYCWTPNGSTIFRVLREREYWNLIHDMLREFWWENVVPAREALLLGREEEVKSYKPASTHQKTGVAIAKSIKLAQETKLFCRELAGHVEFYS 316
[Close]
BLAST of rna-XM_014651444.2 vs. UniProtKB/TrEMBL
Match: tr|C6T7Y3|C6T7Y3_SOYBN (YqaJ domain-containing protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 548.125 bits (1411), Expect = 0.000e+0
Identity = 262/318 (82.39%), Postives = 281/318 (88.36%), Query Frame = 0 
Query:    1 MEMTMSATTCYSMIRFSGVLRTTFVSPYPNRKCAKRVVRIFSTCASPFTSTVDPIIVHSSQFQVLASNLSAASVPQRSEEWFALRKDKLTTSTFSTALGFWKGGRRGELWHEKVFASEAQIMEVSKNSAMEWGTLNEAVAIEQYKKITGNEVSSMGFVVHSKQSYDWLGASPDGVLRGSPEVGLLEVKCPYNKGKPEAGLPWSSMPFYYMPQVQGQMEIMDCEWVDLYCWMPNGSTIFRVLRQREYWNLIHEILREFWWENVVPAREVLLLGREEEVKSYKPASTHKKTGLAIAKSIKLASETKLLCRELAGHIEFFS 318
            MEMTMSA TC +M RFSG+LRTT VS  P RK AK ++R F+ CASPF S+VDPIIV+S   QVLASNLS A VPQRSEEWFALRKDKLTTSTF TALGFWKG RR ELW EKVFASEAQIM    N+AM WGTL EAVA+EQYKKITGNEVSSMGF VHSKQS DWLGASPDGVL   P++G+LEVKCPYNKGKPEAGLPWS MPFYYMPQVQGQMEIMDCEWVDLYCW PNGSTIFRVLR+REYWNLIH++LREFWWENVVPARE LLLGREEEVKSYKPASTH+KTG+AIAKSIKLA ETKL CRELAGH+EF+S
Sbjct:    1 MEMTMSAATCSNMTRFSGILRTTCVSSSPKRKHAKGILRNFTICASPFISSVDPIIVNSPSLQVLASNLSLADVPQRSEEWFALRKDKLTTSTFGTALGFWKGSRRPELWQEKVFASEAQIM--GANNAMAWGTLKEAVAVEQYKKITGNEVSSMGFAVHSKQSCDWLGASPDGVLGCPPQLGILEVKCPYNKGKPEAGLPWSKMPFYYMPQVQGQMEIMDCEWVDLYCWTPNGSTIFRVLREREYWNLIHDMLREFWWENVVPAREALLLGREEEVKSYKPASTHQKTGVAIAKSIKLAQETKLFCRELAGHVEFYS 316
[Close]
BLAST of rna-XM_014651444.2 vs. UniProtKB/TrEMBL
Match: tr|A0A151SDV5|A0A151SDV5_CAJCA (YqaJ domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_025184 PE=4 SV=1)

HSP 1 Score: 542.347 bits (1396), Expect = 0.000e+0
Identity = 259/318 (81.45%), Postives = 280/318 (88.05%), Query Frame = 0 
Query:    1 MEMTMSATTCYSMIRFSGVLRTTFVSPYPNRKCAKRVVRIFSTCASPFTSTVDPIIVHSSQFQVLASNLSAASVPQRSEEWFALRKDKLTTSTFSTALGFWKGGRRGELWHEKVFASEAQIMEVSKNSAMEWGTLNEAVAIEQYKKITGNEVSSMGFVVHSKQSYDWLGASPDGVLRGSPEVGLLEVKCPYNKGKPEAGLPWSSMPFYYMPQVQGQMEIMDCEWVDLYCWMPNGSTIFRVLRQREYWNLIHEILREFWWENVVPAREVLLLGREEEVKSYKPASTHKKTGLAIAKSIKLASETKLLCRELAGHIEFFS 318
            MEMT+S TT   MIRFSG+L T FVSP   RK AK ++R  S CASP  S  DP+I+ S  FQV ASN+S A VPQRSEEWFALRKDKLTTSTFSTALGFWKG RR ELW+EKVFASEAQI+E SKN+AM WGTLNEAVAIEQYKKITG+EVS+MGF VHSKQSYDWLGASPDGVL   P+ G+LEVKCPYNKGKPEAGLPWS+MPFYYMPQVQGQMEIMDCEWVDLYCW PNGSTIFRVLR+REYWNLIHEILREFWWENVVPARE L+LG EE+VKSYKP STH KTGLAIAKSIKLASETKLLCRELAGH+EF++
Sbjct:    1 MEMTISTTTFSGMIRFSGILHTAFVSPSIRRKYAKGLLRNLSICASPLISLNDPVILQSPSFQVFASNVSLADVPQRSEEWFALRKDKLTTSTFSTALGFWKGSRRLELWNEKVFASEAQIVEASKNTAMAWGTLNEAVAIEQYKKITGHEVSTMGFAVHSKQSYDWLGASPDGVLGCFPQGGVLEVKCPYNKGKPEAGLPWSTMPFYYMPQVQGQMEIMDCEWVDLYCWTPNGSTIFRVLREREYWNLIHEILREFWWENVVPAREALILGCEEQVKSYKPTSTHNKTGLAIAKSIKLASETKLLCRELAGHVEFYN 318
[Close]
BLAST of rna-XM_014651444.2 vs. UniProtKB/TrEMBL
Match: tr|A0A6A4NW85|A0A6A4NW85_LUPAL (Putative ING family protein OS=Lupinus albus OX=3870 GN=Lalb_Chr16g0391031 PE=4 SV=1)

HSP 1 Score: 498.434 bits (1282), Expect = 9.781e-176
Identity = 231/316 (73.10%), Postives = 267/316 (84.49%), Query Frame = 0 
Query:    3 MTMSATTCYSMIRFSGVLRTTFVSPYPNRKCAKRVVRIFSTCASPFTSTVDPIIVHSSQFQVLASNLSAASVPQRSEEWFALRKDKLTTSTFSTALGFWKGGRRGELWHEKVFASEAQIMEVSKNSAMEWGTLNEAVAIEQYKKITGNEVSSMGFVVHSKQSYDWLGASPDGVLRGSPEVGLLEVKCPYNKGKPEAGLPWSSMPFYYMPQVQGQMEIMDCEWVDLYCWMPNGSTIFRVLRQREYWNLIHEILREFWWENVVPAREVLLLGREEEVKSYKPASTHKKTGLAIAKSIKLASETKLLCRELAGHIEFFS 318
            MT+SAT+    IRFSG+L   FVSP P     KRV+R  S CASP +S+V+PII+ S  +QV AS L  +  PQRS+EWFALR+DKLTTSTFSTALGFWKG RR ELWHEKVFASEAQI E SK +AM+WG +NEAVA++QYKKITG++V SMGF VHS +  +WLGASPDG+L   PE G+LEVKCPYNKGKPE GLPWS+MPFYYMPQVQGQMEIMDCEWVDLYCW PNGSTIFRVLR+R+YWN++H ILREFWWENV+PARE L LG +E+VKSY+P STHK+TGLAIAKSIKLASE KLLCRE+AGH+EF+S
Sbjct:    4 MTISATSHSCTIRFSGILHKAFVSPSPGTIYGKRVLRNHSVCASPLSSSVNPIIIQSPSYQVFASQLPVSDAPQRSDEWFALRRDKLTTSTFSTALGFWKGRRRPELWHEKVFASEAQIPEDSKRNAMQWGVINEAVAVDQYKKITGHDVGSMGFAVHSNEHLNWLGASPDGLLGCFPEGGILEVKCPYNKGKPETGLPWSTMPFYYMPQVQGQMEIMDCEWVDLYCWTPNGSTIFRVLRERDYWNILHGILREFWWENVIPAREALALGCDEQVKSYEPTSTHKRTGLAIAKSIKLASEAKLLCREIAGHVEFYS 319
[Close]
BLAST of rna-XM_014651444.2 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5MQC6|A0A6A5MQC6_LUPAL (YqaJ domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_00029589 PE=4 SV=1)

HSP 1 Score: 498.049 bits (1281), Expect = 3.235e-175
Identity = 231/316 (73.10%), Postives = 267/316 (84.49%), Query Frame = 0 
Query:    3 MTMSATTCYSMIRFSGVLRTTFVSPYPNRKCAKRVVRIFSTCASPFTSTVDPIIVHSSQFQVLASNLSAASVPQRSEEWFALRKDKLTTSTFSTALGFWKGGRRGELWHEKVFASEAQIMEVSKNSAMEWGTLNEAVAIEQYKKITGNEVSSMGFVVHSKQSYDWLGASPDGVLRGSPEVGLLEVKCPYNKGKPEAGLPWSSMPFYYMPQVQGQMEIMDCEWVDLYCWMPNGSTIFRVLRQREYWNLIHEILREFWWENVVPAREVLLLGREEEVKSYKPASTHKKTGLAIAKSIKLASETKLLCRELAGHIEFFS 318
            MT+SAT+    IRFSG+L   FVSP P     KRV+R  S CASP +S+V+PII+ S  +QV AS L  +  PQRS+EWFALR+DKLTTSTFSTALGFWKG RR ELWHEKVFASEAQI E SK +AM+WG +NEAVA++QYKKITG++V SMGF VHS +  +WLGASPDG+L   PE G+LEVKCPYNKGKPE GLPWS+MPFYYMPQVQGQMEIMDCEWVDLYCW PNGSTIFRVLR+R+YWN++H ILREFWWENV+PARE L LG +E+VKSY+P STHK+TGLAIAKSIKLASE KLLCRE+AGH+EF+S
Sbjct:   28 MTISATSHSCTIRFSGILHKAFVSPSPGTIYGKRVLRNHSVCASPLSSSVNPIIIQSPSYQVFASQLPVSDAPQRSDEWFALRRDKLTTSTFSTALGFWKGRRRPELWHEKVFASEAQIPEDSKRNAMQWGVINEAVAVDQYKKITGHDVGSMGFAVHSNEHLNWLGASPDGLLGCFPEGGILEVKCPYNKGKPETGLPWSTMPFYYMPQVQGQMEIMDCEWVDLYCWTPNGSTIFRVLRERDYWNILHGILREFWWENVIPAREALALGCDEQVKSYEPTSTHKRTGLAIAKSIKLASEAKLLCREIAGHVEFYS 343
The following BLAST results are available for this feature:
BLAST of rna-XM_014651444.2 vs.
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of rna-XM_014651444.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 4
Match NameE-valueIdentityDescription
AT1G67660.21.049e-12963.21| Restriction endonuclease%2C type II-like superfa... [more]
AT1G67660.32.075e-12963.21| Restriction endonuclease%2C type II-like superfa... [more]
AT1G67660.14.681e-12963.21| Restriction endonuclease%2C type II-like superfa... [more]
AT1G13810.12.807e-4936.44| Restriction endonuclease%2C type II-like superfa... [more]
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BLAST of rna-XM_014651444.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3ULR2|A0A1S3ULR2_VIGRR0.000e+0100.00uncharacterized protein LOC106766715 OS=Vigna radi... [more]
tr|A0A0S3R188|A0A0S3R188_PHAAN0.000e+097.80YqaJ domain-containing protein OS=Vigna angularis ... [more]
tr|A0A0L9TLE3|A0A0L9TLE3_PHAAN0.000e+097.80YqaJ domain-containing protein OS=Phaseolus angula... [more]
tr|V7CKL5|V7CKL5_PHAVU0.000e+088.68YqaJ domain-containing protein OS=Phaseolus vulgar... [more]
tr|A0A445JCE3|A0A445JCE3_GLYSO0.000e+082.70YqaJ domain-containing protein OS=Glycine soja OX=... [more]
tr|I1KRY7|I1KRY7_SOYBN0.000e+082.70YqaJ domain-containing protein OS=Glycine max OX=3... [more]
tr|C6T7Y3|C6T7Y3_SOYBN0.000e+082.39YqaJ domain-containing protein OS=Glycine max OX=3... [more]
tr|A0A151SDV5|A0A151SDV5_CAJCA0.000e+081.45YqaJ domain-containing protein OS=Cajanus cajan OX... [more]
tr|A0A6A4NW85|A0A6A4NW85_LUPAL9.781e-17673.10Putative ING family protein OS=Lupinus albus OX=38... [more]
tr|A0A6A5MQC6|A0A6A5MQC6_LUPAL3.235e-17573.10YqaJ domain-containing protein OS=Lupinus albus OX... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019080YqaJ viral recombinasePFAMPF09588YqaJcoord: 80..223
e-value: 2.7E-23
score: 82.8
IPR017482Putative phage-type endonucleaseTIGRFAMTIGR03033TIGR03033coord: 75..232
e-value: 8.7E-23
score: 79.1
IPR011604PD-(D/E)XK endonuclease-like domain superfamilyGENE3D3.90.320.10coord: 75..268
e-value: 1.9E-51
score: 176.7
NoneNo IPR availablePANTHERPTHR46609EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEINcoord: 75..315
NoneNo IPR availableCDDcd22343PDDEXK_lambda_exonuclease-likecoord: 76..258
e-value: 1.68025E-58
score: 184.462
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 65..273

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_014651444.2_VrVC1973A-SNU_v1 ID=rna-XM_014651444.2_VrVC1973A-SNU_v1; Name=rna-XM_014651444.2; organism=Vigna radiata; type=mRNA; length=957bp
ATGGAGATGACAATGTCAGCAACGACTTGTTACAGTATGATTAGATTCAG
TGGCGTTCTCCGGACAACATTTGTGTCACCATATCCCAACAGAAAGTGTG
CAAAAAGAGTAGTGAGAATATTTTCCACGTGTGCCTCACCATTTACTTCT
ACAGTTGACCCTATCATTGTCCACTCCTCTCAATTTCAAGTATTGGCTTC
CAACCTTTCGGCAGCCAGTGTCCCCCAACGGTCAGAGGAGTGGTTTGCCC
TTCGCAAGGACAAGCTTACTACTAGCACATTCAGTACTGCGTTAGGTTTC
TGGAAAGGGGGCCGTCGCGGTGAGCTGTGGCACGAGAAGGTGTTTGCATC
GGAGGCACAAATCATGGAAGTTTCTAAGAATAGCGCCATGGAATGGGGAA
CACTCAATGAAGCAGTGGCTATAGAACAATATAAAAAGATCACAGGTAAT
GAAGTGAGCTCAATGGGGTTTGTAGTTCATTCGAAGCAGTCTTATGATTG
GCTTGGTGCGTCCCCTGATGGGGTTCTTAGGGGCTCTCCAGAAGTTGGAC
TATTAGAAGTTAAGTGCCCTTATAACAAGGGCAAACCTGAGGCTGGCTTG
CCTTGGTCAAGCATGCCTTTTTACTACATGCCTCAAGTGCAAGGGCAGAT
GGAGATAATGGATTGTGAGTGGGTTGATTTGTATTGCTGGATGCCAAATG
GAAGCACTATATTTCGCGTGCTGAGGCAGCGTGAGTATTGGAACTTGATA
CATGAGATTCTACGTGAGTTTTGGTGGGAAAATGTGGTTCCTGCAAGGGA
AGTTCTACTGTTGGGACGTGAAGAAGAGGTGAAATCATATAAGCCTGCAT
CTACACACAAAAAGACAGGATTAGCTATTGCAAAGAGCATAAAATTGGCT
AGTGAAACAAAGCTGTTATGCAGAGAACTTGCTGGCCATATTGAATTTTT
TAGTTGA
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protein sequence of rna-XM_014651444.2_VrVC1973A-SNU_v1

>rna-XM_014651444.2_VrVC1973A-SNU_v1 ID=rna-XM_014651444.2_VrVC1973A-SNU_v1; Name=rna-XM_014651444.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=318bp
MEMTMSATTCYSMIRFSGVLRTTFVSPYPNRKCAKRVVRIFSTCASPFTS
TVDPIIVHSSQFQVLASNLSAASVPQRSEEWFALRKDKLTTSTFSTALGF
WKGGRRGELWHEKVFASEAQIMEVSKNSAMEWGTLNEAVAIEQYKKITGN
EVSSMGFVVHSKQSYDWLGASPDGVLRGSPEVGLLEVKCPYNKGKPEAGL
PWSSMPFYYMPQVQGQMEIMDCEWVDLYCWMPNGSTIFRVLRQREYWNLI
HEILREFWWENVVPAREVLLLGREEEVKSYKPASTHKKTGLAIAKSIKLA
SETKLLCRELAGHIEFFS
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mRNA from alignment at chr07:20376521..20378681+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_014651444.2_VrVC1973A-SNU_v1 ID=rna-XM_014651444.2_VrVC1973A-SNU_v1; Name=rna-XM_014651444.2; organism=Vigna radiata; type=mRNA; length=2161bp; location=Sequence derived from: chr07:20376521..20378681+ (Vigna radiata
GTATCGTTAGTGTAATTCCGTTGTTTGAGACGTCGTTCGTTCTTCTAATT
TTCTCCTTATGGCTATCGTCGCTCGCAGCTGAAATCAGCTCAAATCAACT
CTACTCTATTCCTATGCAAATAGTTCCTAGGATTTCTAACTTCGATTGAA
CCCAGGTACTCTTGTTTTGCATTAGGTTTACCTTAGCATCTTCGAAATCT
GGTTGGACTTTTTGAGTGTGTTTACATGTGAGACATATATCTTCGTTATT
GTTCGTTCCGTCAATGACCTTTTTAGGTTTTCCATTATCTGATTGTGCTT
CTTGGAGTGAGGTCTGAAGTAAAGTTTTCACCACTATCATGGCCGTGCTT
TCTATGATTGAGGATTTTAAACGAATTAGGAGATTTGTGTGAGTCAGTTT
AGGTAGGTCGGTTAGAGAGTTTAATTATATCTGAATTGTTGAATTATAAA
TCAGaacaatgttttcttttgtgcTTTGGTTTTGAGGACAACTTTaggaa
aactttttctttttgggaAAACCATAGTGCATCAAGTTGAGCAGACTTTG
GGTTATGCTTCTATGTTGCAAATTTTGGCGTTTCTATTGTGTTATGCTGT
GTTGTGTCTCTGAGAGTGGTGGTATGAGTTTGAGAACAGCGGATAGTGTT
TCCAGCAGACTGTGTTGTTCCTATTTTGAACTTGGGCCTTGTTTGGACCT
GGAAACtatgaaaagataaaacaaattaaacttaaatttcacTAATCagt
ttaaaatcaaattatatactTCAAATTTTACTGAGGTTATCTCAATTAAC
TTGTGCAAAATTTGAGACACTTGAGAACGATTTGAACTAGTGGGgaagtt
caatttattttacttttttattttcttcttctacaaaTGTTTACGGAGAA
AGTTGATCCTACAGAAATATGTTTTCACATACTTTACTCACTTGTTGCTT
AATGTCACCTAATTTCTGTCAGGTACCTTGTCCTGAGAAATTTGGAATGA
ATGGAGATGACAATGTCAGCAACGACTTGTTACAGTATGATTAGATTCAG
TGGCGTTCTCCGGACAACATTTGTGTCACCATATCCCAACAGAAAGTGTG
CAAAAAGAGTAGTGAGAATATTTTCCACGTGTGCCTCACCATTTACTTCT
ACAGTTGACCCTATCATTGTCCACTCCTCTCAATTTCAAGTATTGGCTTC
CAACCTTTCGGCAGCCAGTGTCCCCCAACGGTCAGAGGAGTGGTTTGCCC
TTCGCAAGGACAAGCTTACTACTAGCACATTCAGTACTGCGTTAGGTTTC
TGGAAAGGGGGCCGTCGCGGTGAGCTGTGGCACGAGAAGGTGTTTGCATC
GGAGGCACAAATCATGGAAGTTTCTAAGAATAGCGCCATGGAATGGGGAA
CACTCAATGAAGCAGTGGCTATAGAACAATATAAAAAGATCACAGGTAAT
GAAGTGAGCTCAATGGGGTTTGTAGTTCATTCGAAGCAGTCTTATGATTG
GCTTGGTGCGTCCCCTGATGGGGTTCTTAGGGGCTCTCCAGAAGTTGGAC
TATTAGAAGTTAAGTGCCCTTATAACAAGGGCAAACCTGAGGCTGGCTTG
CCTTGGTCAAGCATGCCTTTTTACTACATGCCTCAAGTGCAAGGGCAGAT
GGAGATAATGGATTGTGAGTGGGTTGATTTGTATTGCTGGATGCCAAATG
GAAGCACTATATTTCGCGTGCTGAGGCAGCGTGAGTATTGGAACTTGATA
CATGAGATTCTACGTGAGTTTTGGTGGGAAAATGTGGTTCCTGCAAGGGA
AGTTCTACTGTTGGGACGTGAAGAAGAGGTGAAATCATATAAGCCTGCAT
CTACACACAAAAAGACAGGATTAGCTATTGCAAAGAGCATAAAATTGGCT
AGTGAAACAAAGCTGTTATGCAGAGAACTTGCTGGCCATATTGAATTTTT
TAGTTGATTCAAGTTCAGAAGTAATTGGTTAAGCTATTCATTCATTTTGC
ATCGAAACATTTTTTCTCCCTTTCATGTGTTGGTTGTTTTGTAAGACAGA
TTTGGTGCCTAAACTGGAGGGAGAAGTTGCAGGTACCGTCTTTGGCACCC
TGTTATAAATCTAACACCATTTGTAGACAGTGCTCTTCAAATTTAACAAC
ATTTGTACACA
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Coding sequence (CDS) from alignment at chr07:20376521..20378681+

>rna-XM_014651444.2_VrVC1973A-SNU_v1 ID=rna-XM_014651444.2_VrVC1973A-SNU_v1; Name=rna-XM_014651444.2; organism=Vigna radiata; type=CDS; length=957bp; location=Sequence derived from: chr07:20376521..20378681+ (Vigna radiata
ATGGAGATGACAATGTCAGCAACGACTTGTTACAGTATGATTAGATTCAG
TGGCGTTCTCCGGACAACATTTGTGTCACCATATCCCAACAGAAAGTGTG
CAAAAAGAGTAGTGAGAATATTTTCCACGTGTGCCTCACCATTTACTTCT
ACAGTTGACCCTATCATTGTCCACTCCTCTCAATTTCAAGTATTGGCTTC
CAACCTTTCGGCAGCCAGTGTCCCCCAACGGTCAGAGGAGTGGTTTGCCC
TTCGCAAGGACAAGCTTACTACTAGCACATTCAGTACTGCGTTAGGTTTC
TGGAAAGGGGGCCGTCGCGGTGAGCTGTGGCACGAGAAGGTGTTTGCATC
GGAGGCACAAATCATGGAAGTTTCTAAGAATAGCGCCATGGAATGGGGAA
CACTCAATGAAGCAGTGGCTATAGAACAATATAAAAAGATCACAGGTAAT
GAAGTGAGCTCAATGGGGTTTGTAGTTCATTCGAAGCAGTCTTATGATTG
GCTTGGTGCGTCCCCTGATGGGGTTCTTAGGGGCTCTCCAGAAGTTGGAC
TATTAGAAGTTAAGTGCCCTTATAACAAGGGCAAACCTGAGGCTGGCTTG
CCTTGGTCAAGCATGCCTTTTTACTACATGCCTCAAGTGCAAGGGCAGAT
GGAGATAATGGATTGTGAGTGGGTTGATTTGTATTGCTGGATGCCAAATG
GAAGCACTATATTTCGCGTGCTGAGGCAGCGTGAGTATTGGAACTTGATA
CATGAGATTCTACGTGAGTTTTGGTGGGAAAATGTGGTTCCTGCAAGGGA
AGTTCTACTGTTGGGACGTGAAGAAGAGGTGAAATCATATAAGCCTGCAT
CTACACACAAAAAGACAGGATTAGCTATTGCAAAGAGCATAAAATTGGCT
AGTGAAACAAAGCTGTTATGCAGAGAACTTGCTGGCCATATTGAATTTTT
TAGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR019080YqaJ_viral_recombinase
IPR017482Phage_endonuclease_put
IPR011604PDDEXK-like_dom_sf
IPR011335Restrct_endonuc-II-like