rna-XM_022783240.1

Transcript Overview


Name	rna-XM_022783240.1
Unique Name	rna-XM_022783240.1_VrVC1973A-SNU_v1
Type	mRNA
Organism	Vigna radiata (Mung bean, green gram)
Sequence length	1359
Product	F-box protein SKIP14

References

External references for this mRNA


Database	Accession
GeneID	106766714
Genbank	XM_022783240.1

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr07	chromosome	chr07:20608795..20612566 +	Vigna radiata cv. VC1973A genome v6.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vigna radiata cv. VC1973A genome v6.0	2023-06-13
InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0	2023-06-20
Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot	2023-06-20
Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11	2023-06-20
Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL	2023-06-20

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
asvrvL080	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
anvrvL0247	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvrvL0258	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
asvrvL446	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
anvrvL0737	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
cavrvL462	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
ccvrvL0038	Cajanus cajan Asha genome v1.0	Cajanus cajan
ccvrvL0223	Cajanus cajan Asha genome v1.0	Cajanus cajan
ccvrvL0224	Cajanus cajan Asha genome v1.0	Cajanus cajan
crvrvL525	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
pvvrvL055	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
psvrvL477	Pisum sativum Cameor genome v1a	Pisum sativum
pvvrvL237	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
pvvrvL270	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
psvrvL712	Pisum sativum Cameor genome v1a	Pisum sativum
tifvrvL299	Vicia faba cv. Tiffany genome v1.0	Vicia faba
vrvvrvL119	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
vfhvrvL310	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vfhvrvL717	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vrvvssR664	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vrvvssR693	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vrvvuaR475	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
vrvzwsR579	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
vrvzwsR596	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
vrvvuR510	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
vrvvuaR489	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
canvrvL439	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
avjvrvL240	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjvrvL384	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
carvrvL436		Cicer arietinum
carvrvL520		Cicer arietinum
ccavrvL740	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccavrvL750	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
vrvvumR522	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vrvvumR603	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vrvvvaR659	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vrvvvaR682	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vrvvstR524	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vrvvstR594	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vasvrvL084	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
vasvrvL392	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
pvfvrvL046	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
pvfvrvL228	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
pvfvrvL252	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
vrvvunR479	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata

Orthologs


Gene/Transcript	Assembly	Species
Va01G038070.1	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
LR48_mrnaVigan01g092300	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
Vum_01G01525.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata
Vigst.01G140200.01	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
PvulFLAVERTChr02.1001038	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
Vigan.01G196200.01	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
Phvul.002G176800.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
Cc_v2.0_22008.1	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
Psat7g079160.1	Pisum sativum Cameor genome v1a	Pisum sativum
rna-KK1_025185	Cajanus cajan Asha genome v1.0	Cajanus cajan
rna-TanjilR_09104	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
gene-LOC106766714	gene-LOC106766714_VrVC1973A-SNU_v1	Vigna radiata	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
rna-XM_022783240.1_VrVC1973A-SNU_v1	rna-XM_022783240.1_VrVC1973A-SNU_v1	Vigna radiata	polypeptide
rna-XM_022783240.1_VrVC1973A-SNU_v1	rna-XM_022783240.1_VrVC1973A-SNU_v1-protein	Vigna radiata	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
exon-XM_022783240.1-1	exon-XM_022783240.1-1_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_022783240.1-2	exon-XM_022783240.1-2_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_022783240.1-3	exon-XM_022783240.1-3_VrVC1973A-SNU_v1	Vigna radiata	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
cds-XP_022638961.1	cds-XP_022638961.1_VrVC1973A-SNU_v1	Vigna radiata	CDS
cds-XP_022638961.1	cds-XP_022638961.1_VrVC1973A-SNU_v1_2	Vigna radiata	CDS

Homology

[Close]

BLAST of rna-XM_022783240.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LU91|SKI14_ARATH (F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1)

HSP 1 Score: 382.104 bits (980), Expect = 3.270e-128
Identity = 219/462 (47.40%), Postives = 286/462 (61.90%), Query Frame = 0

Query:    1 MALNFSHRPIFSEDNLVSSMRMGIPEKSGVDNCYDYGRDRCDRGGGGATHDDIVDLLPSDPFGMDISTTFTAITGWLEDLEVDY----GGYRRDELGASDDN-YQLFAGLNFIWNNAMRFHACVEEKMG---FGECSSLSDDGAAAASSNF--------GVGSASDADLS--GLPATSGSGDVFRRGDDLEGG----------GGGDESGPHPAFCYSLGYLGLSDLLVVERVCKSLHSTVHDDPLLWRSIHVDQPLNERITDDVLFRLANRAQGNLQCLSLVECTRITDDGLRRVLESNPKLTKLSVPGCTRLSIEGIVGMLKAYNSVGPQGVKHLYIGGLYGVTLKHFEELRFLLGADSRQQMRQSHKPHFYRRGNLYLSCNDDRAMDIEVCPRCQNLRLVYDCPAESCQGTGHTTQMCRACTLCIPRCSQCGHCINDSEYEETFCLELLCSCCSKQLVK 434
            MALNFSHRP  S    +S   M I   +   + +D GR      GG A+  DI+D+LPSDPFGMDI+ TFTAITGWLEDLE DY    G  RRD++   D N  QLFAGL+F WNNAM+F +          FG     + DG+  ++  F        G G A D D S  G   ++ S D     ++   G           G +++  HPA  + L +L   DLL V  VCKSLH+TV DD LLW+ IH+ +PLNE+IT++ L  L  RAQG +QCL +V+C RITDD L+RV+  N ++ K+ VPGCTR++I+GI+ +L+   S G   VKHL + GL+GVT  H++EL  LL  D++ + +   KP FY RG   +SC+DDRA+DIE+CP+CQN +LVYDCPAE C+G    ++ CRAC+LCI RC  CG CI D+EYEE FCLELLC+ CSK   K
Sbjct:    1 MALNFSHRPFSSH---LSEEPMMIANGNWCSS-FDNGRKN---TGGDASSVDILDVLPSDPFGMDINNTFTAITGWLEDLEDDYNNQYGRRRRDDIWIGDGNRQQLFAGLSFFWNNAMQFQSSGYSYGSESLFGG----AFDGSLFSTCKFPESSGENNGFGGALDGDGSCHGAFISASSVDEVLSHENARNGEVVGSSDRCNNGEEDAYVHPAIGFCLYHLRGKDLLSVSMVCKSLHTTVCDDTLLWKHIHICRPLNEKITEEALLHLTERAQGTMQCLRIVDCCRITDDCLKRVVARNRQVVKIGVPGCTRITIDGILSVLRDLKSAGKLQVKHLQLRGLFGVTKDHYDELIDLLNIDNKVK-QTIQKPRFYHRGEACVSCDDDRALDIEMCPKCQNFKLVYDCPAEDCKGKKKGSEECRACSLCIQRCYHCGRCIIDTEYEEMFCLELLCAVCSKPTPK 450

[Close]

BLAST of rna-XM_022783240.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LK24|FB327_ARATH (F-box protein At3g27290 OS=Arabidopsis thaliana OX=3702 GN=At3g27290 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 6.274e-61
Identity = 140/397 (35.26%), Postives = 197/397 (49.62%), Query Frame = 0

Query:   45 GGGATHDDIVDLLPSDPFGMDISTTFTAITGWLEDLEVDYGGYRRDELGASDDNY--QLFAGLNFI--WNNAMRFHACVEEKMGFGECSSLSDDGAAAASSNFGVGSASDADLSGLPATSGSGDVFRRGDDLEGGGGGDESGPHPAFCYSLGYLGLSDLLVVERVCKSLHSTVHDDPLLWRSIHV-DQPLNERITDDVLFRLANRAQGNLQCLSLVECTRITDDGLRRVLESNPKLTKLSVPGCTRLSIEGIVGMLKAYNSVGPQGVKHLYIGGLYGVTLKHFEELRFLLGADSRQQMRQSHKPHFYR--RGNLYLSCNDDRAMDIEVCPRCQNLRLVYDCPAESCQGTG---HTTQMCRACTLCIPRCSQCGHCINDSEYEETFCLELLCSCCSKQ 431
            G G   DD V L P DPF M+I +T  +I+ W  + ++   G   ++    +D +  ++ + LN I  W +  +    V ++M F   S   ++       +   G   +A                                H AF   L YL L ++L VE VC+SL  +V  +P  W SI + D  L  R+TD+ L +L  RA G ++CL+L  C  ITD GL++VL SNP LTKLSV GC RLS  G+V  L+   S    GVK L  GG    T + F+EL  LLG D++  + Q  K  FY   R   YL   DDR  D+E+CP C+   LV+DCPA++C   G   ++   CRAC +CI RC +CG C+ND E  + FC    C  C ++
Sbjct:   21 GLGEFGDDFVGL-PDDPFCMNIRSTLNSISDWFHENQI---GLVSEDHTLPEDPFCMRVRSTLNTISDWFHENQKEIGVVDQMLFETLSWFYNNDDDDGDDDDDGGGGGEA--------------------------------HDAFELVLPYLELKEILAVEVVCRSLRDSVGKEPFFWTSIDLNDSFLQYRVTDESLLKLTRRALGGVRCLNLGGCVGITDYGLKQVLASNPHLTKLSVSGCLRLSTAGLVSTLRDLKSSNRLGVKSLITGGALYFTKEQFKELNLLLGGDAKVGL-QERKKRFYTSCRSEFYLE--DDRVTDLEICPWCEKPSLVFDCPADTCPLKGQYPYSKSSCRACVVCIERCHECGSCLNDCE-NKPFCFAFSCVVCIEK 377

[Close]

BLAST of rna-XM_022783240.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9ZU90|SKI28_ARATH (F-box protein SKIP28 OS=Arabidopsis thaliana OX=3702 GN=SKIP28 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.323e-36
Identity = 85/257 (33.07%), Postives = 137/257 (53.31%), Query Frame = 0

Query:  184 HPAFCYSLGYL-GLSDLLVVERVCKSLHSTVHDDPLLWRSIHVDQPLNERITDDVLFRLANRAQGNLQCLSLVECTRITDDGLRRVLESNPKLTKLSVPGCTRLSIEGIVGMLKAYNSVGPQGVKHLYIGGLYGVTLKHFEELRFLLGADSRQQMRQSHKPHFYRRGNLYLSCNDDRAMDIEVCPRCQNLRLVYDCPAESCQGTGHTTQMCRACTLCIPRCSQCGHCI--NDSEYEETFC--LELLCSCCSKQLVKC 435
            H      L YL  L +LL + RV +SL   + D+  LW  + ++ PL+ R+TDD+L   ++++ G L+ L L +C  +T+ GLRRV+++NP +TK+ VPGC+ L+ EGI+  +++  S     ++ L+I G+ G T +H   L   L ++                            +D+EVCP+C  +R++  C  ESC       + CR C LCIPRC++C  C+  +D+E +E  C   ++LC  C   L KC
Sbjct:   17 HEVLLIVLPYLHSLFELLSMIRVSRSLRDAIRDETALWTKLVIEPPLSSRLTDDILSEFSSKSAGKLKTLILRQCLMVTNKGLRRVVDANPLITKIIVPGCSGLTPEGIMECVESL-SKNNHKLETLHINGVNGFTKQHLSALYTYLSSEG--------------------------TIDLEVCPKCDEVRMIPSCSRESC---NQKQRKCRGCWLCIPRCAECAVCLVGSDTESQEAACGNDDVLCLECWLVLPKC 243

[Close]

BLAST of rna-XM_022783240.1 vs. Araport11
Match: AT3G26000.1 (| Ribonuclease inhibitor | Chr3:9507042-9508542 REVERSE LENGTH=453 | 201606)

HSP 1 Score: 382.104 bits (980), Expect = 3.346e-129
Identity = 219/462 (47.40%), Postives = 286/462 (61.90%), Query Frame = 0

Query:    1 MALNFSHRPIFSEDNLVSSMRMGIPEKSGVDNCYDYGRDRCDRGGGGATHDDIVDLLPSDPFGMDISTTFTAITGWLEDLEVDY----GGYRRDELGASDDN-YQLFAGLNFIWNNAMRFHACVEEKMG---FGECSSLSDDGAAAASSNF--------GVGSASDADLS--GLPATSGSGDVFRRGDDLEGG----------GGGDESGPHPAFCYSLGYLGLSDLLVVERVCKSLHSTVHDDPLLWRSIHVDQPLNERITDDVLFRLANRAQGNLQCLSLVECTRITDDGLRRVLESNPKLTKLSVPGCTRLSIEGIVGMLKAYNSVGPQGVKHLYIGGLYGVTLKHFEELRFLLGADSRQQMRQSHKPHFYRRGNLYLSCNDDRAMDIEVCPRCQNLRLVYDCPAESCQGTGHTTQMCRACTLCIPRCSQCGHCINDSEYEETFCLELLCSCCSKQLVK 434
            MALNFSHRP  S    +S   M I   +   + +D GR      GG A+  DI+D+LPSDPFGMDI+ TFTAITGWLEDLE DY    G  RRD++   D N  QLFAGL+F WNNAM+F +          FG     + DG+  ++  F        G G A D D S  G   ++ S D     ++   G           G +++  HPA  + L +L   DLL V  VCKSLH+TV DD LLW+ IH+ +PLNE+IT++ L  L  RAQG +QCL +V+C RITDD L+RV+  N ++ K+ VPGCTR++I+GI+ +L+   S G   VKHL + GL+GVT  H++EL  LL  D++ + +   KP FY RG   +SC+DDRA+DIE+CP+CQN +LVYDCPAE C+G    ++ CRAC+LCI RC  CG CI D+EYEE FCLELLC+ CSK   K
Sbjct:    1 MALNFSHRPFSSH---LSEEPMMIANGNWCSS-FDNGRKN---TGGDASSVDILDVLPSDPFGMDINNTFTAITGWLEDLEDDYNNQYGRRRRDDIWIGDGNRQQLFAGLSFFWNNAMQFQSSGYSYGSESLFGG----AFDGSLFSTCKFPESSGENNGFGGALDGDGSCHGAFISASSVDEVLSHENARNGEVVGSSDRCNNGEEDAYVHPAIGFCLYHLRGKDLLSVSMVCKSLHTTVCDDTLLWKHIHICRPLNEKITEEALLHLTERAQGTMQCLRIVDCCRITDDCLKRVVARNRQVVKIGVPGCTRITIDGILSVLRDLKSAGKLQVKHLQLRGLFGVTKDHYDELIDLLNIDNKVK-QTIQKPRFYHRGEACVSCDDDRALDIEMCPKCQNFKLVYDCPAEDCKGKKKGSEECRACSLCIQRCYHCGRCIIDTEYEEMFCLELLCAVCSKPTPK 450

[Close]

BLAST of rna-XM_022783240.1 vs. Araport11
Match: AT3G27290.1 (| RNI-like superfamily protein | Chr3:10080038-10081265 REVERSE LENGTH=382 | 201606)

HSP 1 Score: 206.453 bits (524), Expect = 6.419e-62
Identity = 140/397 (35.26%), Postives = 197/397 (49.62%), Query Frame = 0

Query:   45 GGGATHDDIVDLLPSDPFGMDISTTFTAITGWLEDLEVDYGGYRRDELGASDDNY--QLFAGLNFI--WNNAMRFHACVEEKMGFGECSSLSDDGAAAASSNFGVGSASDADLSGLPATSGSGDVFRRGDDLEGGGGGDESGPHPAFCYSLGYLGLSDLLVVERVCKSLHSTVHDDPLLWRSIHV-DQPLNERITDDVLFRLANRAQGNLQCLSLVECTRITDDGLRRVLESNPKLTKLSVPGCTRLSIEGIVGMLKAYNSVGPQGVKHLYIGGLYGVTLKHFEELRFLLGADSRQQMRQSHKPHFYR--RGNLYLSCNDDRAMDIEVCPRCQNLRLVYDCPAESCQGTG---HTTQMCRACTLCIPRCSQCGHCINDSEYEETFCLELLCSCCSKQ 431
            G G   DD V L P DPF M+I +T  +I+ W  + ++   G   ++    +D +  ++ + LN I  W +  +    V ++M F   S   ++       +   G   +A                                H AF   L YL L ++L VE VC+SL  +V  +P  W SI + D  L  R+TD+ L +L  RA G ++CL+L  C  ITD GL++VL SNP LTKLSV GC RLS  G+V  L+   S    GVK L  GG    T + F+EL  LLG D++  + Q  K  FY   R   YL   DDR  D+E+CP C+   LV+DCPA++C   G   ++   CRAC +CI RC +CG C+ND E  + FC    C  C ++
Sbjct:   21 GLGEFGDDFVGL-PDDPFCMNIRSTLNSISDWFHENQI---GLVSEDHTLPEDPFCMRVRSTLNTISDWFHENQKEIGVVDQMLFETLSWFYNNDDDDGDDDDDGGGGGEA--------------------------------HDAFELVLPYLELKEILAVEVVCRSLRDSVGKEPFFWTSIDLNDSFLQYRVTDESLLKLTRRALGGVRCLNLGGCVGITDYGLKQVLASNPHLTKLSVSGCLRLSTAGLVSTLRDLKSSNRLGVKSLITGGALYFTKEQFKELNLLLGGDAKVGL-QERKKRFYTSCRSEFYLE--DDRVTDLEICPWCEKPSLVFDCPADTCPLKGQYPYSKSSCRACVVCIERCHECGSCLNDCE-NKPFCFAFSCVVCIEK 377

[Close]

BLAST of rna-XM_022783240.1 vs. Araport11
Match: AT2G01620.1 (| RNI-like superfamily protein | Chr2:278204-279226 FORWARD LENGTH=292 | 201606)

HSP 1 Score: 139.428 bits (350), Expect = 1.353e-37
Identity = 85/257 (33.07%), Postives = 137/257 (53.31%), Query Frame = 0

Query:  184 HPAFCYSLGYL-GLSDLLVVERVCKSLHSTVHDDPLLWRSIHVDQPLNERITDDVLFRLANRAQGNLQCLSLVECTRITDDGLRRVLESNPKLTKLSVPGCTRLSIEGIVGMLKAYNSVGPQGVKHLYIGGLYGVTLKHFEELRFLLGADSRQQMRQSHKPHFYRRGNLYLSCNDDRAMDIEVCPRCQNLRLVYDCPAESCQGTGHTTQMCRACTLCIPRCSQCGHCI--NDSEYEETFC--LELLCSCCSKQLVKC 435
            H      L YL  L +LL + RV +SL   + D+  LW  + ++ PL+ R+TDD+L   ++++ G L+ L L +C  +T+ GLRRV+++NP +TK+ VPGC+ L+ EGI+  +++  S     ++ L+I G+ G T +H   L   L ++                            +D+EVCP+C  +R++  C  ESC       + CR C LCIPRC++C  C+  +D+E +E  C   ++LC  C   L KC
Sbjct:   17 HEVLLIVLPYLHSLFELLSMIRVSRSLRDAIRDETALWTKLVIEPPLSSRLTDDILSEFSSKSAGKLKTLILRQCLMVTNKGLRRVVDANPLITKIIVPGCSGLTPEGIMECVESL-SKNNHKLETLHINGVNGFTKQHLSALYTYLSSEG--------------------------TIDLEVCPKCDEVRMIPSCSRESC---NQKQRKCRGCWLCIPRCAECAVCLVGSDTESQEAACGNDDVLCLECWLVLPKC 243

[Close]

BLAST of rna-XM_022783240.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0F613|A0A3Q0F613_VIGRR (F-box protein SKIP14 OS=Vigna radiata var. radiata OX=3916 GN=LOC106766714 PE=4 SV=1)

HSP 1 Score: 930.243 bits (2403), Expect = 0.000e+0
Identity = 452/452 (100.00%), Postives = 452/452 (100.00%), Query Frame = 0

Query:    1 MALNFSHRPIFSEDNLVSSMRMGIPEKSGVDNCYDYGRDRCDRGGGGATHDDIVDLLPSDPFGMDISTTFTAITGWLEDLEVDYGGYRRDELGASDDNYQLFAGLNFIWNNAMRFHACVEEKMGFGECSSLSDDGAAAASSNFGVGSASDADLSGLPATSGSGDVFRRGDDLEGGGGGDESGPHPAFCYSLGYLGLSDLLVVERVCKSLHSTVHDDPLLWRSIHVDQPLNERITDDVLFRLANRAQGNLQCLSLVECTRITDDGLRRVLESNPKLTKLSVPGCTRLSIEGIVGMLKAYNSVGPQGVKHLYIGGLYGVTLKHFEELRFLLGADSRQQMRQSHKPHFYRRGNLYLSCNDDRAMDIEVCPRCQNLRLVYDCPAESCQGTGHTTQMCRACTLCIPRCSQCGHCINDSEYEETFCLELLCSCCSKQLVKCSDGKAGPAKSVIIHEQS 452
            MALNFSHRPIFSEDNLVSSMRMGIPEKSGVDNCYDYGRDRCDRGGGGATHDDIVDLLPSDPFGMDISTTFTAITGWLEDLEVDYGGYRRDELGASDDNYQLFAGLNFIWNNAMRFHACVEEKMGFGECSSLSDDGAAAASSNFGVGSASDADLSGLPATSGSGDVFRRGDDLEGGGGGDESGPHPAFCYSLGYLGLSDLLVVERVCKSLHSTVHDDPLLWRSIHVDQPLNERITDDVLFRLANRAQGNLQCLSLVECTRITDDGLRRVLESNPKLTKLSVPGCTRLSIEGIVGMLKAYNSVGPQGVKHLYIGGLYGVTLKHFEELRFLLGADSRQQMRQSHKPHFYRRGNLYLSCNDDRAMDIEVCPRCQNLRLVYDCPAESCQGTGHTTQMCRACTLCIPRCSQCGHCINDSEYEETFCLELLCSCCSKQLVKCSDGKAGPAKSVIIHEQS
Sbjct:    1 MALNFSHRPIFSEDNLVSSMRMGIPEKSGVDNCYDYGRDRCDRGGGGATHDDIVDLLPSDPFGMDISTTFTAITGWLEDLEVDYGGYRRDELGASDDNYQLFAGLNFIWNNAMRFHACVEEKMGFGECSSLSDDGAAAASSNFGVGSASDADLSGLPATSGSGDVFRRGDDLEGGGGGDESGPHPAFCYSLGYLGLSDLLVVERVCKSLHSTVHDDPLLWRSIHVDQPLNERITDDVLFRLANRAQGNLQCLSLVECTRITDDGLRRVLESNPKLTKLSVPGCTRLSIEGIVGMLKAYNSVGPQGVKHLYIGGLYGVTLKHFEELRFLLGADSRQQMRQSHKPHFYRRGNLYLSCNDDRAMDIEVCPRCQNLRLVYDCPAESCQGTGHTTQMCRACTLCIPRCSQCGHCINDSEYEETFCLELLCSCCSKQLVKCSDGKAGPAKSVIIHEQS 452

[Close]

BLAST of rna-XM_022783240.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TLA5|A0A0L9TLA5_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g092300 PE=4 SV=1)

HSP 1 Score: 909.057 bits (2348), Expect = 0.000e+0
Identity = 445/452 (98.45%), Postives = 445/452 (98.45%), Query Frame = 0

Query:    1 MALNFSHRPIFSEDNLVSSMRMGIPEKSGVDNCYDYGRDRCDRGGGGATHDDIVDLLPSDPFGMDISTTFTAITGWLEDLEVDYGGYRRDELGASDDNYQLFAGLNFIWNNAMRFHACVEEKMGFGECSSLSDDGAAAASSNFGVGSASDADLSGLPATSGSGDVFRRGDD-LEGGGGGDESGPHPAFCYSLGYLGLSDLLVVERVCKSLHSTVHDDPLLWRSIHVDQPLNERITDDVLFRLANRAQGNLQCLSLVECTRITDDGLRRVLESNPKLTKLSVPGCTRLSIEGIVGMLKAYNSVGPQGVKHLYIGGLYGVTLKHFEELRFLLGADSRQQMRQSHKPHFYRRGNLYLSCNDDRAMDIEVCPRCQNLRLVYDCPAESCQGTGHTTQMCRACTLCIPRCSQCGHCINDSEYEETFCLELLCSCCSKQLVKCSDGKAGPAKSVIIHEQ 451
            MALNFSHRPIFSEDNLVSSMRMGIPEKSGVDNCYDYGRDRCDRGGGGATHDDIVDLLPSDPFGMDISTTFTAITGWLEDLEVDYGGYRRDELGASDDNYQLFAGLNFIWNNAMRFHACVEEKMGFGECSSLSDDGAAAASSNFGVGSASDADLSGLPATSGSGDVFRRGDD LEGGGGGDESGPHPA  YSLGYLGLSDLLVVERVCK LHSTVHDDPLLWRSIHVDQPLNERITDDVLFRLANRAQGNLQCLSLVECTRITDDGLRRVLESNPKLTKLSVPGCTRLSIEGIVGMLKAYNSVGPQGVKHLYIGGLYGVTLKHFEELRFLLGADS QQMRQSHKPHFYRRGNLYLS NDDRAMDIEVCPRCQNLRLVYDCPAESCQGTGHTTQMCRACTLCIPRCSQCGHCINDSEYEETFCLELLCS CSKQLVKCSDGKAGPAKSVIIHEQ
Sbjct:    1 MALNFSHRPIFSEDNLVSSMRMGIPEKSGVDNCYDYGRDRCDRGGGGATHDDIVDLLPSDPFGMDISTTFTAITGWLEDLEVDYGGYRRDELGASDDNYQLFAGLNFIWNNAMRFHACVEEKMGFGECSSLSDDGAAAASSNFGVGSASDADLSGLPATSGSGDVFRRGDDDLEGGGGGDESGPHPALSYSLGYLGLSDLLVVERVCKFLHSTVHDDPLLWRSIHVDQPLNERITDDVLFRLANRAQGNLQCLSLVECTRITDDGLRRVLESNPKLTKLSVPGCTRLSIEGIVGMLKAYNSVGPQGVKHLYIGGLYGVTLKHFEELRFLLGADSWQQMRQSHKPHFYRRGNLYLSFNDDRAMDIEVCPRCQNLRLVYDCPAESCQGTGHTTQMCRACTLCIPRCSQCGHCINDSEYEETFCLELLCSSCSKQLVKCSDGKAGPAKSVIIHEQ 452

[Close]

BLAST of rna-XM_022783240.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3R170|A0A0S3R170_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G196200 PE=4 SV=1)

HSP 1 Score: 908.286 bits (2346), Expect = 0.000e+0
Identity = 446/453 (98.45%), Postives = 446/453 (98.45%), Query Frame = 0

Query:    1 MALNFSHRPIFSEDNLVSSMRMGIPEKSGVDNCYDYGRDRCDRGGGGATHDDIVDLLPSDPFGMDISTTFTAITGWLEDLEVDYGGYRRDELGASDDNYQLFAGLNFIWNNAMRFHACVEEKMGFGECSSLSDDGAAAASSNFGVGSASDADLSGLPATSGSGDVFRRGDD-LEGGGGGDESGPHPAFCYSLGYLGLSDLLVVERVCKSLHSTVHDDPLLWRSIHVDQPLNERITDDVLFRLANRAQGNLQCLSLVECTRITDDGLRRVLESNPKLTKLSVPGCTRLSIEGIVGMLKAYNSVGPQGVKHLYIGGLYGVTLKHFEELRFLLGADSRQQMRQSHKPHFYRRGNLYLSCNDDRAMDIEVCPRCQNLRLVYDCPAESCQGTGHTTQMCRACTLCIPRCSQCGHCINDSEYEETFCLELLCSCCSKQLVKCSDGKAGPAKSVIIHEQS 452
            MALNFSHRPIFSEDNLVSSMRMGIPEKSGVDNCYDYGRDRCDRGGGGATHDDIVDLLPSDPFGMDISTTFTAITGWLEDLEVDYGGYRRDELGASDDNYQLFAGLNFIWNNAMRFHACVEEKMGFGECSSLSDDGAAAASSNFGVGSASDADLSGLPATSGSGDVFRRGDD LEGGGGGDESGPHPA  YSLGYLGLSDLLVVERVCK LHSTVHDDPLLWRSIHVDQPLNERITDDVLFRLANRAQGNLQCLSLVECTRITDDGLRRVLESNPKLTKLSVPGCTRLSIEGIVGMLKAYNSVGPQGVKHLYIGGLYGVTLKHFEELRFLLGADS QQMRQSHKPHFYRRGNLYLS NDDRAMDIEVCPRCQNLRLVYDCPAESCQGTGHTTQMCRACTLCIPRCSQCGHCINDSEYEETFCLELLCS CSKQLVKCSDGKAGPAKSVIIHEQS
Sbjct:    1 MALNFSHRPIFSEDNLVSSMRMGIPEKSGVDNCYDYGRDRCDRGGGGATHDDIVDLLPSDPFGMDISTTFTAITGWLEDLEVDYGGYRRDELGASDDNYQLFAGLNFIWNNAMRFHACVEEKMGFGECSSLSDDGAAAASSNFGVGSASDADLSGLPATSGSGDVFRRGDDDLEGGGGGDESGPHPALSYSLGYLGLSDLLVVERVCKFLHSTVHDDPLLWRSIHVDQPLNERITDDVLFRLANRAQGNLQCLSLVECTRITDDGLRRVLESNPKLTKLSVPGCTRLSIEGIVGMLKAYNSVGPQGVKHLYIGGLYGVTLKHFEELRFLLGADSWQQMRQSHKPHFYRRGNLYLSFNDDRAMDIEVCPRCQNLRLVYDCPAESCQGTGHTTQMCRACTLCIPRCSQCGHCINDSEYEETFCLELLCSSCSKQLVKCSDGKAGPAKSVIIHEQS 453

[Close]

BLAST of rna-XM_022783240.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6L4H1|A0A4D6L4H1_VIGUN (F-box domain-containing protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g3755 PE=4 SV=1)

HSP 1 Score: 906.36 bits (2341), Expect = 0.000e+0
Identity = 443/453 (97.79%), Postives = 446/453 (98.45%), Query Frame = 0

Query:    1 MALNFSHRPIFSEDNLVSSMRMGIPEKSGVDNCYDYGRDRCDRGGGGATHDDIVDLLPSDPFGMDISTTFTAITGWLEDLEVDYGGYRRDELGASDDNYQLFAGLNFIWNNAMRFHACVEEKMGFGECSSLSDDGAAAA-SSNFGVGSASDADLSGLPATSGSGDVFRRGDDLEGGGGGDESGPHPAFCYSLGYLGLSDLLVVERVCKSLHSTVHDDPLLWRSIHVDQPLNERITDDVLFRLANRAQGNLQCLSLVECTRITDDGLRRVLESNPKLTKLSVPGCTRLSIEGIVGMLKAYNSVGPQGVKHLYIGGLYGVTLKHFEELRFLLGADSRQQMRQSHKPHFYRRGNLYLSCNDDRAMDIEVCPRCQNLRLVYDCPAESCQGTGHTTQMCRACTLCIPRCSQCGHCINDSEYEETFCLELLCSCCSKQLVKCSDGKAGPAKSVIIHEQS 452
            MALNFSHRPIFSEDNLVSSMRMGIPEKSGVDNCYDYGRDRCDRGGGGATHDDIVDLLPSDPFGMDISTTFTAITGWLEDLEVDYGGYRRDELGASDDNYQLFAGLNFIWNNAMRFHACVEEKMGFGECSSLSDDGAAAA SSNFGVGSASDAD+SGLPATSGSGDVFRRGD+LEGGGG DES PHPA  YSLGYLGLSDLLVVERVCKSLHSTVHDDPLLWRSIHVDQPLNERITDDVLFRLANRAQGNLQCLSLVECTRITDDGLRRVLESNPKLTKLSVPGCTRLSIEGIVGMLKAYNSVGPQGVKHLYIGGLYGVT KHFEELRFLLGADSRQQM+QSHKPHFYRRGNLYLSCNDDRAMDIEVCPRCQNLRLVYDCPAESCQGTGHTTQMCRACTLCIPRCSQCGHCINDSEYEETFCLELLCS CSKQLVKCSDGKAGPAKSVIIHEQS
Sbjct:    1 MALNFSHRPIFSEDNLVSSMRMGIPEKSGVDNCYDYGRDRCDRGGGGATHDDIVDLLPSDPFGMDISTTFTAITGWLEDLEVDYGGYRRDELGASDDNYQLFAGLNFIWNNAMRFHACVEEKMGFGECSSLSDDGAAAAASSNFGVGSASDADISGLPATSGSGDVFRRGDELEGGGGRDESCPHPALSYSLGYLGLSDLLVVERVCKSLHSTVHDDPLLWRSIHVDQPLNERITDDVLFRLANRAQGNLQCLSLVECTRITDDGLRRVLESNPKLTKLSVPGCTRLSIEGIVGMLKAYNSVGPQGVKHLYIGGLYGVTQKHFEELRFLLGADSRQQMQQSHKPHFYRRGNLYLSCNDDRAMDIEVCPRCQNLRLVYDCPAESCQGTGHTTQMCRACTLCIPRCSQCGHCINDSEYEETFCLELLCSSCSKQLVKCSDGKAGPAKSVIIHEQS 453

[Close]

BLAST of rna-XM_022783240.1 vs. UniProtKB/TrEMBL
Match: tr|V7CKS9|V7CKS9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G176800g PE=4 SV=1)

HSP 1 Score: 813.142 bits (2099), Expect = 0.000e+0
Identity = 414/462 (89.61%), Postives = 430/462 (93.07%), Query Frame = 0

Query:    1 MALNFSHRPIFSEDNLVSSMRMGIPEKSGVDNCYDYGRDRCDRGGGGATHDDIVDLLPSDPFGMDISTTFTAITGWLEDLEVDYGGYRRDELGASDDNYQLFAGLNFIWNNAMRFHACVEEKM----GFGECSSLSDDGAAAASSNFGVGSASDADLSGLPATSGSGDVFRRGD------DLEGGGGGDESGPHPAFCYSLGYLGLSDLLVVERVCKSLHSTVHDDPLLWRSIHVDQPLNERITDDVLFRLANRAQGNLQCLSLVECTRITDDGLRRVLESNPKLTKLSVPGCTRLSIEGIVGMLKAYNSVGPQGVKHLYIGGLYGVTLKHFEELRFLLGADSRQQMRQSHKPHFYRRGNLYLSCNDDRAMDIEVCPRCQNLRLVYDCPAESCQGTGHTTQMCRACTLCIPRCSQCGHCINDSEYEETFCLELLCSCCSKQLVKCSDGKAGPAKSVIIHEQS 452
            MALNFSHRPIFS+D LVSSMRMGIPEKSGV+NC+DYGRDR    GGGA+HDDIVDLLPSDPFGMDISTTFTAITGWLEDLEVDYGGYRRDELGASD+NYQLFAGLNFIWNNA RF ACVEEK+    GFGECSSLSDDG AAAS+NFGVGSASDAD+SG PATSGSGDV RRGD      +L GGGGGDE GPHPA  +SLGYLGLSDLLVVERVCKSLH+TVHDDPLLWRSIHVDQPLNERITDDVLFRLANRAQGNLQCLSLVECTRITDDGLRRVLE+N KLTKLSVPGCTRLSIEGIVGMLKAYNSVG QGV HL+IGGLYGVT KHFEELRFLLGAD++QQM+QSHKPHFYRRGNLYLSC DDRAMDIEVCPRCQNLRLVYDCPAESCQG GHT QMCRACTLCIPRCSQCGHCINDSEYEETFCLELLCS CSKQLVKCSDGKAGPAKSVIIHEQS
Sbjct:    1 MALNFSHRPIFSKDKLVSSMRMGIPEKSGVENCFDYGRDR---AGGGASHDDIVDLLPSDPFGMDISTTFTAITGWLEDLEVDYGGYRRDELGASDENYQLFAGLNFIWNNAFRFRACVEEKIEENIGFGECSSLSDDGTAAASNNFGVGSASDADMSGFPATSGSGDVVRRGDVVRRDDELGGGGGGDECGPHPALSFSLGYLGLSDLLVVERVCKSLHATVHDDPLLWRSIHVDQPLNERITDDVLFRLANRAQGNLQCLSLVECTRITDDGLRRVLETNTKLTKLSVPGCTRLSIEGIVGMLKAYNSVGAQGVNHLHIGGLYGVTQKHFEELRFLLGADNQQQMQQSHKPHFYRRGNLYLSCYDDRAMDIEVCPRCQNLRLVYDCPAESCQGMGHTPQMCRACTLCIPRCSQCGHCINDSEYEETFCLELLCSSCSKQLVKCSDGKAGPAKSVIIHEQS 459

[Close]

BLAST of rna-XM_022783240.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445KNY9|A0A445KNY9_GLYSO (F-box protein SKIP14 OS=Glycine soja OX=3848 GN=D0Y65_012302 PE=4 SV=1)

HSP 1 Score: 731.095 bits (1886), Expect = 0.000e+0
Identity = 377/467 (80.73%), Postives = 402/467 (86.08%), Query Frame = 0

Query:    1 MALNFSHRPIFSEDNLVSSMRMGIPEKSGVDNCYDYGRDRCDRGGGGATHDDIVDLLPSDPFGMDISTTFTAITGWLEDLE-VDYGGYRRDELGASDDNYQLFAGLNFIWNNAMRFHA-CVEEKMGFGECSSLSDDGAAAASSNFGVGSASDAD-LSGLPATSGSGDVFRR------GDDLE---GGGGGDESGPHPAFCYSLGYLGLSDLLVVERVCKSLHSTVHDDPLLWRSIHVDQPLNERITDDVLFRLANRAQGNLQCLSLVECTRITDDGLRRVLESNPKLTKLSVPGCTRLSIEGIVGMLKAYNSVGPQGVKHLYIGGLYGVTLKHFEELRFLLGADSRQQMRQSHKPHFYRRGNLYLSCNDDRAMDIEVCPRCQNLRLVYDCPAESCQGTGHTTQMCRACTLCIPRCSQCGHCINDSEYEETFCLELLCSCCSKQLVKCS---DGKAGPAKSVIIHEQS 452
            MALNFSHRPIFSEDNLVS MRMGIPEKS VDNC+DYGR+R   GGGGA HDDI+DLLPSDPFGMDISTT TAITGWLEDLE VDYGGYRRDELGASD NYQLFAGLNFIWNNAMRFHA CVEEK GFGE  S+ +DGAAAASSNFG GS ++ D +SGLPA S SGDV RR      GD      GG GG+E  PHPA  +SLGYLGLSDLLVVERVCKSLHSTV  DPLLWRSIHVD PLNERITDDVLF+L NRAQG+LQCLSLVECTRITDDGL+RVL+SNPKLTKLSVPGCTRLSIEGIVG+LKAYNS+G QG+KHL+IGGLYGVT KHFEEL FLLGAD    ++ SHKPH+Y RGNLYLSC+DDR +DIEVCP CQNLRLVYDCPAESCQG  HTTQ+CRACTLCIPRCSQCG CINDSEYEETFCLELLCS CSKQLVKCS   D K G  KS +IHEQS
Sbjct:    1 MALNFSHRPIFSEDNLVSPMRMGIPEKSVVDNCFDYGRER---GGGGANHDDILDLLPSDPFGMDISTTVTAITGWLEDLEIVDYGGYRRDELGASDGNYQLFAGLNFIWNNAMRFHASCVEEKRGFGESCSVRNDGAAAASSNFGFGSVNNYDEVSGLPAISRSGDVVRRVGGAGRGDVARPDGGGSGGEELAPHPALSFSLGYLGLSDLLVVERVCKSLHSTVCGDPLLWRSIHVDPPLNERITDDVLFQLTNRAQGHLQCLSLVECTRITDDGLKRVLQSNPKLTKLSVPGCTRLSIEGIVGILKAYNSMGTQGLKHLHIGGLYGVTQKHFEELSFLLGADG-PLLQHSHKPHYYCRGNLYLSCDDDRVIDIEVCPLCQNLRLVYDCPAESCQGVEHTTQICRACTLCIPRCSQCGCCINDSEYEETFCLELLCSSCSKQLVKCSEREDRKIGSDKSAVIHEQS 463

[Close]

BLAST of rna-XM_022783240.1 vs. UniProtKB/TrEMBL
Match: tr|I1K3J1|I1K3J1_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100778863 PE=4 SV=1)

HSP 1 Score: 731.095 bits (1886), Expect = 0.000e+0
Identity = 377/467 (80.73%), Postives = 402/467 (86.08%), Query Frame = 0

Query:    1 MALNFSHRPIFSEDNLVSSMRMGIPEKSGVDNCYDYGRDRCDRGGGGATHDDIVDLLPSDPFGMDISTTFTAITGWLEDLE-VDYGGYRRDELGASDDNYQLFAGLNFIWNNAMRFHA-CVEEKMGFGECSSLSDDGAAAASSNFGVGSASDAD-LSGLPATSGSGDVFRR------GDDLE---GGGGGDESGPHPAFCYSLGYLGLSDLLVVERVCKSLHSTVHDDPLLWRSIHVDQPLNERITDDVLFRLANRAQGNLQCLSLVECTRITDDGLRRVLESNPKLTKLSVPGCTRLSIEGIVGMLKAYNSVGPQGVKHLYIGGLYGVTLKHFEELRFLLGADSRQQMRQSHKPHFYRRGNLYLSCNDDRAMDIEVCPRCQNLRLVYDCPAESCQGTGHTTQMCRACTLCIPRCSQCGHCINDSEYEETFCLELLCSCCSKQLVKCS---DGKAGPAKSVIIHEQS 452
            MALNFSHRPIFSEDNLVS MRMGIPEKS VDNC+DYGR+R   GGGGA HDDI+DLLPSDPFGMDISTT TAITGWLEDLE VDYGGYRRDELGASD NYQLFAGLNFIWNNAMRFHA CVEEK GFGE  S+ +DGAAAASSNFG GS ++ D +SGLPA S SGDV RR      GD      GG GG+E  PHPA  +SLGYLGLSDLLVVERVCKSLHSTV  DPLLWRSIHVD PLNERITDDVLF+L NRAQG+LQCLSLVECTRITDDGL+RVL+SNPKLTKLSVPGCTRLSIEGIVG+LKAYNS+G QG+KHL+IGGLYGVT KHFEEL FLLGAD    ++ SHKPH+Y RGNLYLSC+DDR +DIEVCP CQNLRLVYDCPAESCQG  HTTQ+CRACTLCIPRCSQCG CINDSEYEETFCLELLCS CSKQLVKCS   D K G  KS +IHEQS
Sbjct:    1 MALNFSHRPIFSEDNLVSPMRMGIPEKSVVDNCFDYGRER---GGGGANHDDILDLLPSDPFGMDISTTVTAITGWLEDLEIVDYGGYRRDELGASDGNYQLFAGLNFIWNNAMRFHASCVEEKRGFGESCSVRNDGAAAASSNFGFGSVNNYDEVSGLPAISRSGDVVRRVGGAGRGDVARPDGGGSGGEELAPHPALSFSLGYLGLSDLLVVERVCKSLHSTVCGDPLLWRSIHVDPPLNERITDDVLFQLTNRAQGHLQCLSLVECTRITDDGLKRVLQSNPKLTKLSVPGCTRLSIEGIVGILKAYNSMGTQGLKHLHIGGLYGVTQKHFEELSFLLGADG-PLLQHSHKPHYYCRGNLYLSCDDDRVIDIEVCPLCQNLRLVYDCPAESCQGVEHTTQICRACTLCIPRCSQCGCCINDSEYEETFCLELLCSSCSKQLVKCSEREDRKIGSDKSAVIHEQS 463

[Close]

BLAST of rna-XM_022783240.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151SDW0|A0A151SDW0_CAJCA (F-box protein SKIP14 OS=Cajanus cajan OX=3821 GN=KK1_025185 PE=4 SV=1)

HSP 1 Score: 723.776 bits (1867), Expect = 0.000e+0
Identity = 376/458 (82.10%), Postives = 400/458 (87.34%), Query Frame = 0

Query:    1 MALNFSHRPIFSEDNLVSSMRMGIPEKSGVDNCYDYGRDRCDRGGGGATHDDIVDLLPSDPFGMDISTTFTAITGWLEDLEVDYGGYRRDELGASDDNYQLFAGLNFIWNNAMRFHACVEEKMGFGECSSLSDDGAAAASSNFGVGSASDADLSGLPATSG-SGDV-FRRGDDLEGGGGGDESGPHPAFCYSLGYLGLSDLLVVERVCKSLHSTVHDDPLLWRSIHVDQPLNERITDDVLFRLANRAQGNLQCLSLVECTRITDDGLRRVLESNPKLTKLSVPGCTRLSIEGIVGMLKAYNSVGPQGVKHLYIGGLYGVTLKHFEELRFLLGADSRQQMRQ-SHKPHFYRRGNLYLSCNDDRAMDIEVCPRCQNLRLVYDCPAESCQGTGHTTQMCRACTLCIPRCSQCGHCINDSEYEETFCLELLCSCCSKQLVKCS---DGKAGPAKSVIIHEQS 452
            MALNFSHRPIFSEDNLVS MRMGIPEKSGV+NC+DYGRDR   GGGGA+HDDI+DLLPSDPFGMDISTTFTAITGWLEDLEVDYGGYRRDELGASDDNYQLFAGLNFIWNNAMRFHACVEE  GFGEC S+  DGAAA SSNFG  SA D DLSGLPA +  SGDV    GDD  GG G +E  PH A  +SLGYLGLSDLL VER CKSLHSTV  DPLLWR+IHVDQPLNERITDDVL +L NRA+GNLQCLSLVECTRITDDGL+RVLE NPKL KLSVPGCTRLSI+GIVG+LKA+NSV  QGVKHL+IGGLYGVT KHFEEL+ LLGADS  Q+RQ SHKPH+YRRGN YL CND+R +DIEVCPRCQNLRLVYDCPAESCQ   HTTQ+CRACTLCIPRCSQCG CINDSEYEETFCLELLCS CSKQLVKCS   D K GPAKSV+IHEQ+
Sbjct:    1 MALNFSHRPIFSEDNLVSPMRMGIPEKSGVENCFDYGRDR--GGGGGASHDDILDLLPSDPFGMDISTTFTAITGWLEDLEVDYGGYRRDELGASDDNYQLFAGLNFIWNNAMRFHACVEENRGFGECCSVRGDGAAA-SSNFGFRSAGDGDLSGLPAAANVSGDVETESGDD--GGEGCEEQAPHLALSFSLGYLGLSDLLAVERACKSLHSTVRGDPLLWRTIHVDQPLNERITDDVLLQLTNRAEGNLQCLSLVECTRITDDGLKRVLEGNPKLIKLSVPGCTRLSIDGIVGILKAFNSVDTQGVKHLHIGGLYGVTQKHFEELKHLLGADS--QLRQHSHKPHYYRRGNFYLPCNDNRTIDIEVCPRCQNLRLVYDCPAESCQRVEHTTQVCRACTLCIPRCSQCGRCINDSEYEETFCLELLCSSCSKQLVKCSESTDRKVGPAKSVVIHEQN 451

[Close]

BLAST of rna-XM_022783240.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445JCP3|A0A445JCP3_GLYSO (F-box protein SKIP14 OS=Glycine soja OX=3848 GN=D0Y65_020131 PE=4 SV=1)

HSP 1 Score: 719.539 bits (1856), Expect = 0.000e+0
Identity = 375/458 (81.88%), Postives = 401/458 (87.55%), Query Frame = 0

Query:    1 MALNFSHRPIFSEDNLVSSMRMGIPEKSGVDNCYDYGRDRCDRGGGGATHDDIVDLLPSDPFGMDISTTFTAITGWLEDLE-VDYGGYRRDELGASDDNYQLFAGLNFIWNNAMRFHA-CVEEKMGFGECSSLSDDGAAAASSNFGVGSASDAD-LSGLPATSGSGDVFRRGDDLEGGGGGDESGPHPAFCYSLGYLGLSDLLVVERVCKSLHSTVHDDPLLWRSIHVDQPLNERITDDVLFRLANRAQGNLQCLSLVECTRITDDGLRRVLESNPKLTKLSVPGCTRLSIEGIVGMLKAYNSVGPQGVKHLYIGGLYGVTLKHFEELRFLLGADSRQQMRQSHKPHFYRRGNLYLSCNDDRAMDIEVCPRCQNLRLVYDCPAESCQGTGHTTQMCRACTLCIPRCSQCGHCINDSEYEETFCLELLCSCCSKQLVKCS---DGKAGPAKSVIIHEQS 452
            MALNFSHRPIFSEDNLVS MRMGIPEKS V+NC+DYGRDR    GGGA+HDDI+DLLPSDPFGMDISTT TAITGWLEDLE VDYGGYRRDELGASD NYQLFAGLNFIWNNAMRFHA CVEEK GFGE  S+ +DGAAAAS+NFG GS ++ D +SGLPATSGSGDV RRG    GG    E  PHPA  +SLGYLGLSDLLVVERVCKSLHSTV  DPLLWRSIHVDQPLNERITDDVL +L NRAQG+LQCLSLVECTRITDDGL+R+LE NPKLTKLSVPGCTRLSIEGIV +LKAYNS+  QGVKHL+IGGLYGVT KHFEELRFLLGADS   +  SHK H+YRRGNLYLSC+DD+A+DIEVCPRCQNLRLVYDCPAESCQG  HTTQ+CRACTLCIPRCSQCG CINDSEYEETFCLELLCS CSKQLVKCS   D K G  KSV+IHEQ+
Sbjct:    1 MALNFSHRPIFSEDNLVSPMRMGIPEKSVVENCFDYGRDR---SGGGASHDDILDLLPSDPFGMDISTTVTAITGWLEDLEIVDYGGYRRDELGASDGNYQLFAGLNFIWNNAMRFHASCVEEKRGFGESCSVRNDGAAAASNNFGFGSVNNYDEVSGLPATSGSGDVVRRGGGGGGGD---ELAPHPALSFSLGYLGLSDLLVVERVCKSLHSTVRGDPLLWRSIHVDQPLNERITDDVLLQLTNRAQGHLQCLSLVECTRITDDGLKRILEGNPKLTKLSVPGCTRLSIEGIVTILKAYNSMDTQGVKHLHIGGLYGVTQKHFEELRFLLGADS-PLLPHSHKSHYYRRGNLYLSCDDDQAIDIEVCPRCQNLRLVYDCPAESCQGVEHTTQVCRACTLCIPRCSQCGRCINDSEYEETFCLELLCSSCSKQLVKCSERGDRKIGSDKSVVIHEQN 451

[Close]

BLAST of rna-XM_022783240.1 vs. UniProtKB/TrEMBL
Match: tr|I1KRY5|I1KRY5_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100807460 PE=4 SV=1)

HSP 1 Score: 719.539 bits (1856), Expect = 0.000e+0
Identity = 375/458 (81.88%), Postives = 401/458 (87.55%), Query Frame = 0

Query:    1 MALNFSHRPIFSEDNLVSSMRMGIPEKSGVDNCYDYGRDRCDRGGGGATHDDIVDLLPSDPFGMDISTTFTAITGWLEDLE-VDYGGYRRDELGASDDNYQLFAGLNFIWNNAMRFHA-CVEEKMGFGECSSLSDDGAAAASSNFGVGSASDAD-LSGLPATSGSGDVFRRGDDLEGGGGGDESGPHPAFCYSLGYLGLSDLLVVERVCKSLHSTVHDDPLLWRSIHVDQPLNERITDDVLFRLANRAQGNLQCLSLVECTRITDDGLRRVLESNPKLTKLSVPGCTRLSIEGIVGMLKAYNSVGPQGVKHLYIGGLYGVTLKHFEELRFLLGADSRQQMRQSHKPHFYRRGNLYLSCNDDRAMDIEVCPRCQNLRLVYDCPAESCQGTGHTTQMCRACTLCIPRCSQCGHCINDSEYEETFCLELLCSCCSKQLVKCS---DGKAGPAKSVIIHEQS 452
            MALNFSHRPIFSEDNLVS MRMGIPEKS V+NC+DYGRDR    GGGA+HDDI+DLLPSDPFGMDISTT TAITGWLEDLE VDYGGYRRDELGASD NYQLFAGLNFIWNNAMRFHA CVEEK GFGE  S+ +DGAAAAS+NFG GS ++ D +SGLPATSGSGDV RRG    GG    E  PHPA  +SLGYLGLSDLLVVERVCKSLHSTV  DPLLWRSIHVDQPLNERITDDVL +L NRAQG+LQCLSLVECTRITDDGL+R+LE NPKLTKLSVPGCTRLSIEGIV +LKAYNS+  QGVKHL+IGGLYGVT KHFEELRFLLGADS   +  SHK H+YRRGNLYLSC+DD+A+DIEVCPRCQNLRLVYDCPAESCQG  HTTQ+CRACTLCIPRCSQCG CINDSEYEETFCLELLCS CSKQLVKCS   D K G  KSV+IHEQ+
Sbjct:    1 MALNFSHRPIFSEDNLVSPMRMGIPEKSVVENCFDYGRDR---SGGGASHDDILDLLPSDPFGMDISTTVTAITGWLEDLEIVDYGGYRRDELGASDGNYQLFAGLNFIWNNAMRFHASCVEEKRGFGESCSVRNDGAAAASNNFGFGSVNNYDEVSGLPATSGSGDVVRRGGGGGGGD---ELAPHPALSFSLGYLGLSDLLVVERVCKSLHSTVRGDPLLWRSIHVDQPLNERITDDVLLQLTNRAQGHLQCLSLVECTRITDDGLKRILEGNPKLTKLSVPGCTRLSIEGIVTILKAYNSMDTQGVKHLHIGGLYGVTQKHFEELRFLLGADS-PLLPHSHKSHYYRRGNLYLSCDDDQAIDIEVCPRCQNLRLVYDCPAESCQGVEHTTQVCRACTLCIPRCSQCGRCINDSEYEETFCLELLCSSCSKQLVKCSERGDRKIGSDKSVVIHEQN 451

The following BLAST results are available for this feature:

BLAST of rna-XM_022783240.1 vs. UniProtKB/Swiss-Prot
BLAST of rna-XM_022783240.1 vs. Araport11
BLAST of rna-XM_022783240.1 vs. UniProtKB/TrEMBL

BLAST of rna-XM_022783240.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 3

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
sp\|Q9LU91\|SKI14_ARATH	3.270e-128	47.40	F-box protein SKIP14 OS=Arabidopsis thaliana OX=37...	[more]
sp\|Q9LK24\|FB327_ARATH	6.274e-61	35.26	F-box protein At3g27290 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9ZU90\|SKI28_ARATH	1.323e-36	33.07	F-box protein SKIP28 OS=Arabidopsis thaliana OX=37...	[more]

BLAST of rna-XM_022783240.1 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 3

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT3G26000.1	3.346e-129	47.40	\| Ribonuclease inhibitor \| Chr3:9507042-9508542 RE...	[more]
AT3G27290.1	6.419e-62	35.26	\| RNI-like superfamily protein \| Chr3:10080038-100...	[more]
AT2G01620.1	1.353e-37	33.07	\| RNI-like superfamily protein \| Chr2:278204-27922...	[more]

BLAST of rna-XM_022783240.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
tr\|A0A3Q0F613\|A0A3Q0F613_VIGRR	0.000e+0	100.00	F-box protein SKIP14 OS=Vigna radiata var. radiata...	[more]
tr\|A0A0L9TLA5\|A0A0L9TLA5_PHAAN	0.000e+0	98.45	Uncharacterized protein OS=Phaseolus angularis OX=...	[more]
tr\|A0A0S3R170\|A0A0S3R170_PHAAN	0.000e+0	98.45	Uncharacterized protein OS=Vigna angularis var. an...	[more]
tr\|A0A4D6L4H1\|A0A4D6L4H1_VIGUN	0.000e+0	97.79	F-box domain-containing protein OS=Vigna unguicula...	[more]
tr\|V7CKS9\|V7CKS9_PHAVU	0.000e+0	89.61	Uncharacterized protein OS=Phaseolus vulgaris OX=3...	[more]
tr\|A0A445KNY9\|A0A445KNY9_GLYSO	0.000e+0	80.73	F-box protein SKIP14 OS=Glycine soja OX=3848 GN=D0...	[more]
tr\|I1K3J1\|I1K3J1_SOYBN	0.000e+0	80.73	Uncharacterized protein OS=Glycine max OX=3847 GN=...	[more]
tr\|A0A151SDW0\|A0A151SDW0_CAJCA	0.000e+0	82.10	F-box protein SKIP14 OS=Cajanus cajan OX=3821 GN=K...	[more]
tr\|A0A445JCP3\|A0A445JCP3_GLYSO	0.000e+0	81.88	F-box protein SKIP14 OS=Glycine soja OX=3848 GN=D0...	[more]
tr\|I1KRY5\|I1KRY5_SOYBN	0.000e+0	81.88	Uncharacterized protein OS=Glycine max OX=3847 GN=...	[more]

InterPro

Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 188..408 e-value: 6.3E-12 score: 47.1
None	No IPR available	PANTHER	PTHR13382	MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B	coord: 99..429
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 231..320
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 191..224

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr07:20608795..20612566+
coding sequence from alignment at chr07:20608795..20612566+

mRNA sequence

>rna-XM_022783240.1_VrVC1973A-SNU_v1 ID=rna-XM_022783240.1_VrVC1973A-SNU_v1; Name=rna-XM_022783240.1; organism=Vigna radiata; type=mRNA; length=1359bp
ATGGCGTTGAATTTCTCGCATCGACCGATTTTTTCTGAGGATAATTTGGT
TTCGTCGATGAGGATGGGGATTCCGGAGAAGAGCGGTGTTGATAATTGCT
ATGATTACGGAAGAGATAGGTGTGATAGGGGTGGTGGTGGTGCGACTCAC
GATGACATTGTCGATCTTTTGCCTTCGGATCCTTTCGGCATGGACATCAG
CACCACCTTCACGGCCATCACCGGGTGGCTTGAGGATTTGGAGGTTGATT
ATGGTGGTTATAGAAGGGATGAGCTTGGGGCGAGTGATGACAATTACCAG
CTTTTTGCTGGGTTGAATTTCATTTGGAACAATGCTATGAGGTTCCATGC
GTGTGTTGAGGAGAAGATGGGGTTTGGCGAGTGTAGTTCTCTGAGTGACG
ATGGAGCTGCTGCTGCATCGAGCAATTTTGGGGTTGGATCTGCTTCTGAT
GCTGATTTATCGGGTTTGCCTGCCACTAGCGGGTCGGGTGATGTTTTTAG
ACGGGGTGATGACCTTGAAGGAGGAGGTGGGGGTGATGAATCTGGTCCTC
ACCCTGCCTTTTGTTATTCTCTTGGTTATCTGGGATTGTCTGATCTTCTT
GTTGTCGAAAGAGTTTGTAAGTCTCTGCATTCCACGGTTCATGATGATCC
GCTTTTGTGGAGGAGTATCCACGTCGATCAGCCTTTGAATGAGAGGATAA
CTGACGATGTTCTTTTCCGATTGGCTAACAGGGCTCAAGGTAATCTTCAG
TGCTTGAGCCTTGTTGAATGTACCAGGATAACTGATGATGGTTTGAGGCG
GGTTCTTGAAAGCAATCCCAAATTAACCAAGTTGAGTGTACCTGGATGTA
CAAGACTCAGTATTGAGGGTATTGTGGGTATGCTAAAAGCCTACAACTCT
GTGGGTCCCCAAGGGGTGAAGCATTTATACATAGGAGGTCTTTATGGTGT
TACACTAAAGCATTTTGAAGAGTTGAGGTTCTTGTTGGGTGCTGATAGCC
GGCAGCAGATGCGGCAGTCCCATAAACCTCACTTCTATCGCAGGGGAAAT
TTGTATCTGTCTTGTAATGATGATCGAGCCATGGATATTGAAGTTTGTCC
ACGGTGCCAGAATTTGAGGCTTGTATATGATTGTCCGGCAGAGAGTTGTC
AAGGGACGGGACACACCACTCAGATGTGCAGGGCATGCACTCTATGCATA
CCCCGGTGTAGTCAGTGTGGCCACTGTATCAATGACAGTGAATATGAGGA
AACATTTTGTTTGGAATTGCTTTGCTCTTGTTGTTCTAAGCAGCTAGTCA
AATGTTCAGATGGAAAGGCTGGACCAGCTAAGTCAGTTATTATTCATGAA
CAAAGCTAG

protein sequence of rna-XM_022783240.1_VrVC1973A-SNU_v1

>rna-XM_022783240.1_VrVC1973A-SNU_v1 ID=rna-XM_022783240.1_VrVC1973A-SNU_v1; Name=rna-XM_022783240.1_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=452bp
MALNFSHRPIFSEDNLVSSMRMGIPEKSGVDNCYDYGRDRCDRGGGGATH
DDIVDLLPSDPFGMDISTTFTAITGWLEDLEVDYGGYRRDELGASDDNYQ
LFAGLNFIWNNAMRFHACVEEKMGFGECSSLSDDGAAAASSNFGVGSASD
ADLSGLPATSGSGDVFRRGDDLEGGGGGDESGPHPAFCYSLGYLGLSDLL
VVERVCKSLHSTVHDDPLLWRSIHVDQPLNERITDDVLFRLANRAQGNLQ
CLSLVECTRITDDGLRRVLESNPKLTKLSVPGCTRLSIEGIVGMLKAYNS
VGPQGVKHLYIGGLYGVTLKHFEELRFLLGADSRQQMRQSHKPHFYRRGN
LYLSCNDDRAMDIEVCPRCQNLRLVYDCPAESCQGTGHTTQMCRACTLCI
PRCSQCGHCINDSEYEETFCLELLCSCCSKQLVKCSDGKAGPAKSVIIHE
QS

mRNA from alignment at chr07:20608795..20612566+

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>rna-XM_022783240.1_VrVC1973A-SNU_v1 ID=rna-XM_022783240.1_VrVC1973A-SNU_v1; Name=rna-XM_022783240.1; organism=Vigna radiata; type=mRNA; length=3772bp; location=Sequence derived from: chr07:20608795..20612566+ (Vigna radiata
taataattcgATGAGaagttttctctctctttctctctcgcTCGTTACCG
CGAACTCGATCGGCATCGGCACCCACACGAGGGGAAACGCGATTTCCTTT
TCCCTTCgctaaacaaacaaacaaactctTTCTCTTCAGGATTCCAAATC
CATCCCTGTAAGATTTCTATTTTCTCCAATTTAGGGtttctctctcattc
ctctcttcaatttcttcttctttcttctatCTTCTTTCTGACGCCACTTT
GCGAATTCGTTTCTTCCTATCCTTTCTTCTACGATTATATTAACTCAATC
TTCCCTTCCCCTTCCTATCCTCAGGCCTATCTGTTGACgagacaaaaaaa
ttaaaaaagaaaaaaaaaaaagaaagagagagtagGGAtttccttttgta
ttttttgttctgTGGATAAATTCGATTCTGTTATTCGTCCTCTCATCATA
TTCTAGCTGTTGTTTTTTAGAGAGATTAATGTCAATTGGGTTATTATGCA
AGAAACTCTGTGAAGTTTTTGGTGCTTTGTTTTAGTTTGCCATCCGAAAT
CGAGGGTTTTCTTGTTAGATCTCAGCCAGGGCcacagtttttttattttt
tttcatttttttttgtggttttcatatttttttttctttttcttcttgtt
ctggTGTCCTTCCTTTTCtgggaaggaaaagaaaaagaaaggacctcgag
aaaaaaattagggtttggtTATTGGTTTAGGGTTGTGTACATACATAGGT
AGATAGATACATGCGATGGCGTTGAATTTCTCGCATCGACCGATTTTTTC
TGAGGATAATTTGGTTTCGTCGATGAGGATGGGGATTCCGGAGAAGAGCG
GTGTTGATAATTGCTATGATTACGGAAGAGATAGGTGTGATAGGGGTGGT
GGTGGTGCGACTCACGATGACATTGTCGATCTTTTGCCTTCGGATCCTTT
CGGCATGGACATCAGCACCACCTTCACGGCCATCACCGGGTGGCTTGAGG
ATTTGGAGGTTGATTATGGTGGTTATAGAAGGGATGAGCTTGGGGCGAGT
GATGACAATTACCAGCTTTTTGCTGGGTTGAATTTCATTTGGAACAATGC
TATGAGGTTCCATGCGTGTGTTGAGGAGAAGATGGGGTTTGGCGAGTGTA
GTTCTCTGAGTGACGATGGAGCTGCTGCTGCATCGAGCAATTTTGGGGTT
GGATCTGCTTCTGATGCTGATTTATCGGGTTTGCCTGCCACTAGCGGGTC
GGGTGATGTTTTTAGACGGGGTGATGACCTTGAAGGAGGAGGTGGGGGTG
ATGAATCTGGTCCTCACCCTGCCTTTTGTTATTCTCTTGGTTATCTGGGA
TTGTCTGATCTTCTTGTTGTCGAAAGAGTTTGTAAGTCTCTGCATTCCAC
GGTTCATGATGATCCGCTTTTGTGGAGGAGTATCCACGTCGATCAGCCTT
TGAATGAGAGGATAACTGACGATGTTCTTTTCCGATTGGCTAACAGGGCT
CAAGGTAATCTTCAGTGCTTGAGCCTTGTTGAATGTACCAGGATAACTGA
TGATGGTTTGAGGCGGGTTCTTGAAAGCAATCCCAAATTAACCAAGGTAA
ACACGCGTTGCCATACTGTGTTTGTGAATTTCacattgaaactaaaattc
ATCTTAAGCATGTGTATGTGGTTTTACgtgtaaaattaatttggatAATG
TCAGATggtgttgttttattttagttattcgTTGAATGTTCCTTTTATAC
AGCAAGATGGTTAAAAGTGTCTTTTGGGAACTGGTGAAGTAATCATCAGA
TAAAAAGTCTCTTTTATTCTCATTAAAGAACCTTGGCCGTGTTTTCTGTA
CACTTTGGATGTGGTTCTCgggaattttatttattggaaTCTTTTGCCCA
AGTTAGCAtgcctcttttctttttttaatattttattttcctgtATATCG
TGCGTGAAACATTTGACCTTTTCATTATTTTGCTTATTGTTTTTAATCTC
GTTTTCAGTCCTCCATTACAGAAAATCAATTTGGGGTTCTTTTAGAATTG
TCTCTATACTTTATCAGTTATTGATAGAGGAATATATGGATTCATTTAGG
TGTGGGAAATGctttatttttgtccaaaacaATTAAGCAGTTTTTCCTTT
TGACCACAACTGTATATTTGTGCTGGTAATTTGCTGACCTAACCGTCCTG
TCATTATTTTCTGTTGCTAtttatatccattaatggaTGAATTGGTAGAA
AATGCGCTATATACACCCTTATTTTGAAGGGAAGACGTGAAATAATAGTG
AATCATATATCTAGTTGGGgcaatttaattgtttaattgtCCCTCATTCA
AGCTTATTTTAATGTTGAGATGCAATCAGTTTGAATAATTCTCATGAATT
TATTACATATCTTGTCTTTTGTCATTGTTGATGTCGTTGTTTCATGTATC
ATATGATTTATTGTTGGTCTGCTTTATAATCCCTTCTTGTCAACTGTTAT
TGATCTAATTACCCTAAGCGTTAAAATACCTGTTGGTCAGCcgtattttt
cttttgtccatattatattataaaccaAGTAAAATTTTCTCCAAAATCTG
TGCAGTTGAGTGTACCTGGATGTACAAGACTCAGTATTGAGGGTATTGTG
GGTATGCTAAAAGCCTACAACTCTGTGGGTCCCCAAGGGGTGAAGCATTT
ATACATAGGAGGTCTTTATGGTGTTACACTAAAGCATTTTGAAGAGTTGA
GGTTCTTGTTGGGTGCTGATAGCCGGCAGCAGATGCGGCAGTCCCATAAA
CCTCACTTCTATCGCAGGGGAAATTTGTATCTGTCTTGTAATGATGATCG
AGCCATGGATATTGAAGTTTGTCCACGGTGCCAGAATTTGAGGCTTGTAT
ATGATTGTCCGGCAGAGAGTTGTCAAGGGACGGGACACACCACTCAGATG
TGCAGGGCATGCACTCTATGCATACCCCGGTGTAGTCAGTGTGGCCACTG
TATCAATGACAGTGAATATGAGGAAACATTTTGTTTGGAATTGCTTTGCT
CTTGTTGTTCTAAGCAGCTAGTCAAATGTTCAGATGGAAAGGCTGGACCA
GCTAAGTCAGTTATTATTCATGAACAAAGCTAGAGTTGTTGTCAAAGTAT
CCTGTGAAAAGTCTGAGAAAAAGTTTTATATGGAAGTCATATGAAGCGTT
CGTTGAATGCTGTTAGAGTTCTTTGGCGTTCTTTGTAATTGGTCTTGGAG
GTGGGATGCATTTGATGGGTATTTTCCTTTCCTAGAGAAAGTGGAAAATG
ACTCCATTTTTGTGTTTCCGCAGCTACCGGAGTGCAACCTGCAGGAATGA
ACTTGATTGCCATGATTATTGAACACGTATTGCACACTATGGATTTTCAA
TTATATTGTGATTAAGAGGTTATGAGGGCTGCAGTTGGGTGTTGTGCTTT
GCAACGTTGCATTCGGATAACATTTGTGATTGGCTCGGATGCATAATCGG
TGGGAACACTCTGATCTTTAGACTTTGGTTATTTTTTCATTTGCTGTATT
GAATAATTGACTCTTGCTAGGTTGTGGTGTTCGTAccctgttttattttc
tttttttgccaTCCTTGGAggagaaaaataaggaaaatggTATTATGTTG
TCATTAAATCCACGCTTATGTCACTTTCAGCATTAGCTTGTATCAAATGA
AATGCATTTACGGTGGACTTGGACTTGAAAATGAATGCTATTTATTATGT
ACTTGAGCATTTCCCGGGAAAA

Coding sequence (CDS) from alignment at chr07:20608795..20612566+

>rna-XM_022783240.1_VrVC1973A-SNU_v1 ID=rna-XM_022783240.1_VrVC1973A-SNU_v1; Name=rna-XM_022783240.1; organism=Vigna radiata; type=CDS; length=1359bp; location=Sequence derived from: chr07:20608795..20612566+ (Vigna radiata
ATGGCGTTGAATTTCTCGCATCGACCGATTTTTTCTGAGGATAATTTGGT
TTCGTCGATGAGGATGGGGATTCCGGAGAAGAGCGGTGTTGATAATTGCT
ATGATTACGGAAGAGATAGGTGTGATAGGGGTGGTGGTGGTGCGACTCAC
GATGACATTGTCGATCTTTTGCCTTCGGATCCTTTCGGCATGGACATCAG
CACCACCTTCACGGCCATCACCGGGTGGCTTGAGGATTTGGAGGTTGATT
ATGGTGGTTATAGAAGGGATGAGCTTGGGGCGAGTGATGACAATTACCAG
CTTTTTGCTGGGTTGAATTTCATTTGGAACAATGCTATGAGGTTCCATGC
GTGTGTTGAGGAGAAGATGGGGTTTGGCGAGTGTAGTTCTCTGAGTGACG
ATGGAGCTGCTGCTGCATCGAGCAATTTTGGGGTTGGATCTGCTTCTGAT
GCTGATTTATCGGGTTTGCCTGCCACTAGCGGGTCGGGTGATGTTTTTAG
ACGGGGTGATGACCTTGAAGGAGGAGGTGGGGGTGATGAATCTGGTCCTC
ACCCTGCCTTTTGTTATTCTCTTGGTTATCTGGGATTGTCTGATCTTCTT
GTTGTCGAAAGAGTTTGTAAGTCTCTGCATTCCACGGTTCATGATGATCC
GCTTTTGTGGAGGAGTATCCACGTCGATCAGCCTTTGAATGAGAGGATAA
CTGACGATGTTCTTTTCCGATTGGCTAACAGGGCTCAAGGTAATCTTCAG
TGCTTGAGCCTTGTTGAATGTACCAGGATAACTGATGATGGTTTGAGGCG
GGTTCTTGAAAGCAATCCCAAATTAACCAAGTTGAGTGTACCTGGATGTA
CAAGACTCAGTATTGAGGGTATTGTGGGTATGCTAAAAGCCTACAACTCT
GTGGGTCCCCAAGGGGTGAAGCATTTATACATAGGAGGTCTTTATGGTGT
TACACTAAAGCATTTTGAAGAGTTGAGGTTCTTGTTGGGTGCTGATAGCC
GGCAGCAGATGCGGCAGTCCCATAAACCTCACTTCTATCGCAGGGGAAAT
TTGTATCTGTCTTGTAATGATGATCGAGCCATGGATATTGAAGTTTGTCC
ACGGTGCCAGAATTTGAGGCTTGTATATGATTGTCCGGCAGAGAGTTGTC
AAGGGACGGGACACACCACTCAGATGTGCAGGGCATGCACTCTATGCATA
CCCCGGTGTAGTCAGTGTGGCCACTGTATCAATGACAGTGAATATGAGGA
AACATTTTGTTTGGAATTGCTTTGCTCTTGTTGTTCTAAGCAGCTAGTCA
AATGTTCAGATGGAAAGGCTGGACCAGCTAAGTCAGTTATTATTCATGAA
CAAAGCTAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR032675	LRR_dom_sf
IPR036047	F-box-like_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Search form

rna-XM_022783240.1