rna-XM_014661303.2

Transcript Overview
Namerna-XM_014661303.2
Unique Namerna-XM_014661303.2_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length738
ProductRPM1-interacting protein 4
References
External references for this mRNA
DatabaseAccession
GeneID106774344
GenbankXM_014661303.2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr09chromosomechr09:13862293..13868322 +Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anvrvL0003Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0010Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0128Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvrvL263Vigna angularis Jingnong 6 genome v1.1Vigna angularis
caivrvL726Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavrvL599Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
crvrvL677Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvrvL241Pisum sativum Cameor genome v1aPisum sativum
pvvrvL079Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvrvL621Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvrvL441Vicia faba cv. Tiffany genome v1.0Vicia faba
vrvvrvR008Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvssR019Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR040Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvrvL454Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuR015Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuR029Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuaR013Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvzwsR011Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvzwsR014Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuaR029Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvrvL561Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvrvL122Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL331Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvrvL159Cicer arietinum
carvrvL547Cicer arietinum
ccavrvL011Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL548Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vrvvumR017Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR038Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvvaR034Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR039Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvstR018Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR036Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvrvL334Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL614Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvrvL073Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL576Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vrvvunR015Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR034Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vigun05g134100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigst.04G113600.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
LR48_mrnaVigan11g136000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vfaba.Hedin2.R1.4g070040.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Ca_19099.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Psat04G0607800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-TanjilR_10450Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
jg6831.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
XM_058883587.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigun05g134100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Psat03G0464700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vum_09G00312.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vum_04G01180.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Cr_18040.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Va11G052730.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vfaba.Tiffany.R1.4g054800.1Vicia faba cv. Tiffany genome v1.0Vicia faba
XM_058887653.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigan.09G048700.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigun10g046200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigan.04G163900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-XM_004510201.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Phvul.008G130600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
jg16523.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Va03G040410.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
PvulFLAVERTChr10.245Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Ca_11699Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
evm.model.Chr10.333.1.62113169.1.62122bf7Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun10g046200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Cc_v2.0_01252.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
evm.model.Chr05.1187Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
PvulFLAVERTChr08.798Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigst.09G026500.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-TanjilR_25313Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_014642656.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106774344gene-LOC106774344_VrVC1973A-SNU_v1Vigna radiatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_014661303.2-1exon-XM_014661303.2-1_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014661303.2-2exon-XM_014661303.2-2_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014661303.2-3exon-XM_014661303.2-3_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014661303.2-4exon-XM_014661303.2-4_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014661303.2-5exon-XM_014661303.2-5_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_014516789.1cds-XP_014516789.1_VrVC1973A-SNU_v1Vigna radiataCDS
cds-XP_014516789.1cds-XP_014516789.1_VrVC1973A-SNU_v1_2Vigna radiataCDS
cds-XP_014516789.1cds-XP_014516789.1_VrVC1973A-SNU_v1_3Vigna radiataCDS
cds-XP_014516789.1cds-XP_014516789.1_VrVC1973A-SNU_v1_4Vigna radiataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_014661303.2_VrVC1973A-SNU_v1rna-XM_014661303.2_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_014661303.2_VrVC1973A-SNU_v1rna-XM_014661303.2_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


Homology
[Close]
BLAST of rna-XM_014661303.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q8GYN5|RIN4_ARATH (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.131e-45
Identity = 108/252 (42.86%), Postives = 137/252 (54.37%), Query Frame = 0 
Query:    4 RSHVPKFGNWDSGENVPYTAYFDKARKGRT-GARIINPNDPEENSDLGLDNPSSEQLPPSKPRVSSE----DPSGKGSLPL----EDDPKHFIDSPARHDNVSNRTSSRSHGVTSADNRRRHSTQSVGSDHSIERSPLHRQARPPGRDSPQWEPKNSYDNIQGTPGRSRLRQAN-RGDETPDKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPAQVPGTPNDRPQHNKGQFTDDKVQCCCFAWGKK 245
            RS+VPKFGNW++ ENVPYTAYFDKARK R  G++I+NPNDPE NSD      S  Q PP  P   ++    D   +    +    E + K F D+    +  +N+   R+    S DN+                SPLH               KNSYD   GT G+SR +  N R DE+P+K   VPKFGDWD NNP+SADG+THIFNKVREER  G A V G+ +  P H   +  ++   CCCF +G K
Sbjct:    3 RSNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSD------SQSQAPPHPPSSRTKPEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQNNSYDNK----------------SPLH---------------KNSYD---GT-GKSRPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSG-ANVSGS-SRTPTHQSSRNPNNTSSCCCFGFGGK 211
[Close]
BLAST of rna-XM_014661303.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q8S3M3|NOIL_ELAOL (NOI-like protein OS=Elaeis oleifera OX=80265 PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 4.788e-11
Identity = 29/47 (61.70%), Postives = 36/47 (76.60%), Query Frame = 0 
Query:    1 MAQRSHVPKFGNWDSGENVPYTAYFDKARKGR-TGARIINPNDPEEN 46
            MAQ +HVPKFGNWD GEN+ YT YF+   + +  G++I NPNDPEEN
Sbjct:    1 MAQPAHVPKFGNWD-GENISYTTYFETVHRDKGDGSKIFNPNDPEEN 46
[Close]
BLAST of rna-XM_014661303.2 vs. UniProtKB/Swiss-Prot
Match: sp|O22633|NOI4_ARATH (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 3.062e-10
Identity = 28/46 (60.87%), Postives = 36/46 (78.26%), Query Frame = 0 
Query:  175 DKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPAQVPGTPN 220
            DKG  +PKFG+WDVN+PASA+GFT IFNK R+E++ G    PG+P 
Sbjct:    3 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTG--GKPGSPG 46
[Close]
BLAST of rna-XM_014661303.2 vs. Araport11
Match: AT3G25070.2 (| RPM1 interacting protein 4 | Chr3:9132891-9133747 FORWARD LENGTH=224 | 201606)

HSP 1 Score: 157.532 bits (397), Expect = 1.318e-47
Identity = 109/255 (42.75%), Postives = 139/255 (54.51%), Query Frame = 0 
Query:    1 MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRT-GARIINPNDPEENSDLGLDNPSSEQLPPSKPRVSSE----DPSGKGSLPL----EDDPKHFIDSPARHDNVSNRTSSRSHGVTSADNRRRHSTQSVGSDHSIERSPLHRQARPPGRDSPQWEPKNSYDNIQGTPGRSRLRQAN-RGDETPDKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPAQVPGTPNDRPQHNKGQFTDDKVQCCCFAWGKK 245
            + QRS+VPKFGNW++ ENVPYTAYFDKARK R  G++I+NPNDPE NSD      S  Q PP  P   ++    D   +    +    E + K F D+    +  +N+   R+    S DN+                SPLH               KNSYD   GT G+SR +  N R DE+P+K   VPKFGDWD NNP+SADG+THIFNKVREER  G A V G+ +  P H   +  ++   CCCF +G K
Sbjct:   13 LQQRSNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSD------SQSQAPPHPPSSRTKPEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQNNSYDNK----------------SPLH---------------KNSYD---GT-GKSRPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSG-ANVSGS-SRTPTHQSSRNPNNTSSCCCFGFGGK 224
[Close]
BLAST of rna-XM_014661303.2 vs. Araport11
Match: AT3G25070.1 (| RPM1 interacting protein 4 | Chr3:9132458-9133747 FORWARD LENGTH=211 | 201606)

HSP 1 Score: 154.836 bits (390), Expect = 1.157e-46
Identity = 108/252 (42.86%), Postives = 137/252 (54.37%), Query Frame = 0 
Query:    4 RSHVPKFGNWDSGENVPYTAYFDKARKGRT-GARIINPNDPEENSDLGLDNPSSEQLPPSKPRVSSE----DPSGKGSLPL----EDDPKHFIDSPARHDNVSNRTSSRSHGVTSADNRRRHSTQSVGSDHSIERSPLHRQARPPGRDSPQWEPKNSYDNIQGTPGRSRLRQAN-RGDETPDKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPAQVPGTPNDRPQHNKGQFTDDKVQCCCFAWGKK 245
            RS+VPKFGNW++ ENVPYTAYFDKARK R  G++I+NPNDPE NSD      S  Q PP  P   ++    D   +    +    E + K F D+    +  +N+   R+    S DN+                SPLH               KNSYD   GT G+SR +  N R DE+P+K   VPKFGDWD NNP+SADG+THIFNKVREER  G A V G+ +  P H   +  ++   CCCF +G K
Sbjct:    3 RSNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSD------SQSQAPPHPPSSRTKPEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQNNSYDNK----------------SPLH---------------KNSYD---GT-GKSRPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSG-ANVSGS-SRTPTHQSSRNPNNTSSCCCFGFGGK 211
[Close]
BLAST of rna-XM_014661303.2 vs. Araport11
Match: AT2G04410.1 (| RPM1-interacting protein 4 (RIN4) family protein | Chr2:1534012-1535040 REVERSE LENGTH=73 | 201606)

HSP 1 Score: 60.4622 bits (145), Expect = 4.395e-12
Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 0 
Query:  175 DKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQ-GGPAQVPGTPNDRPQHNK-GQFTDD--KVQCCCF 240
            DKG  +PKFG+WDVN+P+SA+GFT IFNK R E++ GG +  PG   D P +NK G+  +   K   CC 
Sbjct:    3 DKGRPLPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPG--KDEPGYNKNGEVLEKPAKKWFCCI 70
[Close]
BLAST of rna-XM_014661303.2 vs. Araport11
Match: AT5G55850.1 (| RPM1-interacting protein 4 (RIN4) family protein | Chr5:22603617-22604951 FORWARD LENGTH=114 | 201606)

HSP 1 Score: 60.077 bits (144), Expect = 1.971e-11
Identity = 28/45 (62.22%), Postives = 36/45 (80.00%), Query Frame = 0 
Query:  175 DKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPAQVPGTP 219
            DKG  +PKFG+WDVN+PASA+GFT IFNK R+E++ G    PG+P
Sbjct:    3 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGK--PGSP 45
[Close]
BLAST of rna-XM_014661303.2 vs. Araport11
Match: AT5G55850.3 (| RPM1-interacting protein 4 (RIN4) family protein | Chr5:22603617-22604850 FORWARD LENGTH=79 | 201606)

HSP 1 Score: 58.5362 bits (140), Expect = 3.133e-11
Identity = 28/46 (60.87%), Postives = 36/46 (78.26%), Query Frame = 0 
Query:  175 DKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPAQVPGTPN 220
            DKG  +PKFG+WDVN+PASA+GFT IFNK R+E++ G    PG+P 
Sbjct:    3 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTG--GKPGSPG 46
[Close]
BLAST of rna-XM_014661303.2 vs. Araport11
Match: AT5G55850.2 (| RPM1-interacting protein 4 (RIN4) family protein | Chr5:22603617-22604951 FORWARD LENGTH=130 | 201606)

HSP 1 Score: 59.3066 bits (142), Expect = 4.921e-11
Identity = 28/45 (62.22%), Postives = 36/45 (80.00%), Query Frame = 0 
Query:  175 DKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPAQVPGTP 219
            DKG  +PKFG+WDVN+PASA+GFT IFNK R+E++ G    PG+P
Sbjct:   19 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGK--PGSP 61
[Close]
BLAST of rna-XM_014661303.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3VF94|A0A1S3VF94_VIGRR (RPM1-interacting protein 4 OS=Vigna radiata var. radiata OX=3916 GN=LOC106774344 PE=4 SV=1)

HSP 1 Score: 502.671 bits (1293), Expect = 7.821e-180
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0 
Query:    1 MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENSDLGLDNPSSEQLPPSKPRVSSEDPSGKGSLPLEDDPKHFIDSPARHDNVSNRTSSRSHGVTSADNRRRHSTQSVGSDHSIERSPLHRQARPPGRDSPQWEPKNSYDNIQGTPGRSRLRQANRGDETPDKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPAQVPGTPNDRPQHNKGQFTDDKVQCCCFAWGKK 245
            MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENSDLGLDNPSSEQLPPSKPRVSSEDPSGKGSLPLEDDPKHFIDSPARHDNVSNRTSSRSHGVTSADNRRRHSTQSVGSDHSIERSPLHRQARPPGRDSPQWEPKNSYDNIQGTPGRSRLRQANRGDETPDKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPAQVPGTPNDRPQHNKGQFTDDKVQCCCFAWGKK
Sbjct:    1 MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENSDLGLDNPSSEQLPPSKPRVSSEDPSGKGSLPLEDDPKHFIDSPARHDNVSNRTSSRSHGVTSADNRRRHSTQSVGSDHSIERSPLHRQARPPGRDSPQWEPKNSYDNIQGTPGRSRLRQANRGDETPDKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPAQVPGTPNDRPQHNKGQFTDDKVQCCCFAWGKK 245
[Close]
BLAST of rna-XM_014661303.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SW63|A0A0S3SW63_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.09G048700 PE=4 SV=1)

HSP 1 Score: 498.434 bits (1282), Expect = 3.887e-178
Identity = 242/245 (98.78%), Postives = 245/245 (100.00%), Query Frame = 0 
Query:    1 MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENSDLGLDNPSSEQLPPSKPRVSSEDPSGKGSLPLEDDPKHFIDSPARHDNVSNRTSSRSHGVTSADNRRRHSTQSVGSDHSIERSPLHRQARPPGRDSPQWEPKNSYDNIQGTPGRSRLRQANRGDETPDKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPAQVPGTPNDRPQHNKGQFTDDKVQCCCFAWGKK 245
            MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENSDLGLDNPSSEQLPPSKPRVSSEDPSGKGSLPLEDDPKHFIDSPARHDNVSNRTSSRSHGVTSADNRRRHSTQSVGSDHSI+RSPLHRQARPPGRDSPQWEPKNSYDNIQGTPGRSRLRQANRGDETPDKGAAVPKFGDWDVNNPA+ADGFTHIFNKVREERQGGPAQVPGTPNDRPQH+KGQFTDDKVQCCCFAWGKK
Sbjct:    1 MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENSDLGLDNPSSEQLPPSKPRVSSEDPSGKGSLPLEDDPKHFIDSPARHDNVSNRTSSRSHGVTSADNRRRHSTQSVGSDHSIDRSPLHRQARPPGRDSPQWEPKNSYDNIQGTPGRSRLRQANRGDETPDKGAAVPKFGDWDVNNPATADGFTHIFNKVREERQGGPAQVPGTPNDRPQHSKGQFTDDKVQCCCFAWGKK 245
[Close]
BLAST of rna-XM_014661303.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9VTB2|A0A0L9VTB2_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan11g136000 PE=4 SV=1)

HSP 1 Score: 498.434 bits (1282), Expect = 3.887e-178
Identity = 242/245 (98.78%), Postives = 245/245 (100.00%), Query Frame = 0 
Query:    1 MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENSDLGLDNPSSEQLPPSKPRVSSEDPSGKGSLPLEDDPKHFIDSPARHDNVSNRTSSRSHGVTSADNRRRHSTQSVGSDHSIERSPLHRQARPPGRDSPQWEPKNSYDNIQGTPGRSRLRQANRGDETPDKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPAQVPGTPNDRPQHNKGQFTDDKVQCCCFAWGKK 245
            MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENSDLGLDNPSSEQLPPSKPRVSSEDPSGKGSLPLEDDPKHFIDSPARHDNVSNRTSSRSHGVTSADNRRRHSTQSVGSDHSI+RSPLHRQARPPGRDSPQWEPKNSYDNIQGTPGRSRLRQANRGDETPDKGAAVPKFGDWDVNNPA+ADGFTHIFNKVREERQGGPAQVPGTPNDRPQH+KGQFTDDKVQCCCFAWGKK
Sbjct:    1 MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENSDLGLDNPSSEQLPPSKPRVSSEDPSGKGSLPLEDDPKHFIDSPARHDNVSNRTSSRSHGVTSADNRRRHSTQSVGSDHSIDRSPLHRQARPPGRDSPQWEPKNSYDNIQGTPGRSRLRQANRGDETPDKGAAVPKFGDWDVNNPATADGFTHIFNKVREERQGGPAQVPGTPNDRPQHSKGQFTDDKVQCCCFAWGKK 245
[Close]
BLAST of rna-XM_014661303.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MXL2|A0A4D6MXL2_VIGUN (RPM1-interacting protein 4 OS=Vigna unguiculata OX=3917 GN=DEO72_LG8g2930 PE=4 SV=1)

HSP 1 Score: 473.396 bits (1217), Expect = 4.380e-167
Identity = 231/236 (97.88%), Postives = 236/236 (100.00%), Query Frame = 0 
Query:    1 MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENSDLGLDNPSSEQLPPSKPRVSSEDPSGKGSLPLEDDPKHFIDSPARHDNVSNRTSSRSHGVTSADNRRRHSTQSVGSDHSIERSPLHRQARPPGRDSPQWEPKNSYDNIQGTPGRSRLRQANRGDETPDKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPAQVPGTPNDRPQHNKGQFTDDKVQ 236
            MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENSDLGLDNPSSEQLPPSKPRVSSEDPSGKGSLPLEDDPKHFIDSPARHDNVSNRTSSRSHGV+SA+NRRRHSTQSVGS+HSIERSPLHRQARPPGRDSPQWEPKNSYDN+QGTPGRSRLRQANRGDETPDKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPAQVPGTPNDRPQHNKGQF+DDKVQ
Sbjct:    1 MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENSDLGLDNPSSEQLPPSKPRVSSEDPSGKGSLPLEDDPKHFIDSPARHDNVSNRTSSRSHGVSSAENRRRHSTQSVGSEHSIERSPLHRQARPPGRDSPQWEPKNSYDNLQGTPGRSRLRQANRGDETPDKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPAQVPGTPNDRPQHNKGQFSDDKVQ 236
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BLAST of rna-XM_014661303.2 vs. UniProtKB/TrEMBL
Match: tr|V7AKN6|V7AKN6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_010G021200g PE=4 SV=1)

HSP 1 Score: 439.884 bits (1130), Expect = 5.133e-155
Identity = 220/246 (89.43%), Postives = 225/246 (91.46%), Query Frame = 0 
Query:    1 MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENSDLGLDNPSSEQLPPSKPRVSSEDPSGKGSLPLEDDPKHFIDSPARHDNVSNRTSSRSHGVTSADNRRRHSTQSVGSDHSIERSPLHRQARPPGRDSPQWEPKNSYDNIQGTPGRSRLRQANRGDETPDKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPAQ-VPGTPNDRPQHNKGQFTDDKVQCCCFAWGKK 245
            MAQRSHVPKFGNWDSG+NVPYTAYFDKARKGRTGA+IINPNDPEENSDLGLDNPSSE LPP KPRVSSEDPSGKGSL LEDDPK FIDSPARHDN SNR+ SRSHGV  ADNRRR S QS GS+HSI+RSPLHRQARPPGRDSP WEPKNSYDNIQGTPGRSRLRQANRGDETPDKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPAQ  PGT N R Q N  QF DDKVQCCCFAWGKK
Sbjct:    1 MAQRSHVPKFGNWDSGDNVPYTAYFDKARKGRTGAKIINPNDPEENSDLGLDNPSSEHLPPPKPRVSSEDPSGKGSLHLEDDPKPFIDSPARHDNASNRSGSRSHGVPPADNRRRPSMQSAGSEHSIDRSPLHRQARPPGRDSPLWEPKNSYDNIQGTPGRSRLRQANRGDETPDKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPAQDAPGTLNGRLQQNNRQFNDDKVQCCCFAWGKK 246
[Close]
BLAST of rna-XM_014661303.2 vs. UniProtKB/TrEMBL
Match: tr|D8WJ54|D8WJ54_SOYBN (RIN4a protein OS=Glycine max OX=3847 GN=RIN4a PE=2 SV=1)

HSP 1 Score: 425.246 bits (1092), Expect = 4.217e-149
Identity = 213/245 (86.94%), Postives = 227/245 (92.65%), Query Frame = 0 
Query:    1 MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENSDLGLDNPSSEQLPPSKPRVSSEDPSGKGSLPLEDDPKHFIDSPARHDNVSNRTSSRSHGVTSADNRRRHSTQSVGSDHSIERSPLHRQARPPGRDSPQWEPKNSYDNIQGTPGRSRLRQANRGDETPDKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPAQVPGTPNDRPQHNKGQFTDDKVQCCCFAWGKK 245
            MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEEN+DL LDNPSS+ LPP++PR +SED SGKGSLPLEDDPKHF+DSPARHDNVS+R+ SRSHGV SA+NRRRHSTQS GS++SIERSPLHRQAR PGRDSPQWEPKNSYDN QGTPGRSRLR  NRGDETPDKGAAVPKFGDWDVNNP+SADGFTHIFNKVREERQG P QVPGTPN+RPQ  +GQ  DDKVQCCCFAWG K
Sbjct:    1 MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENADLSLDNPSSDHLPPTRPRANSEDQSGKGSLPLEDDPKHFVDSPARHDNVSSRSGSRSHGVGSAENRRRHSTQSTGSEYSIERSPLHRQARAPGRDSPQWEPKNSYDNSQGTPGRSRLRPVNRGDETPDKGAAVPKFGDWDVNNPSSADGFTHIFNKVREERQGVPGQVPGTPNERPQAIRGQSNDDKVQCCCFAWGGK 245
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BLAST of rna-XM_014661303.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2RTN6|A0A0B2RTN6_GLYSO (RPM1-interacting protein 4 OS=Glycine soja OX=3848 GN=D0Y65_006531 PE=4 SV=1)

HSP 1 Score: 425.246 bits (1092), Expect = 4.217e-149
Identity = 213/245 (86.94%), Postives = 227/245 (92.65%), Query Frame = 0 
Query:    1 MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENSDLGLDNPSSEQLPPSKPRVSSEDPSGKGSLPLEDDPKHFIDSPARHDNVSNRTSSRSHGVTSADNRRRHSTQSVGSDHSIERSPLHRQARPPGRDSPQWEPKNSYDNIQGTPGRSRLRQANRGDETPDKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPAQVPGTPNDRPQHNKGQFTDDKVQCCCFAWGKK 245
            MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEEN+DL LDNPSS+ LPP++PR +SED SGKGSLPLEDDPKHF+DSPARHDNVS+R+ SRSHGV SA+NRRRHSTQS GS++SIERSPLHRQAR PGRDSPQWEPKNSYDN QGTPGRSRLR  NRGDETPDKGAAVPKFGDWDVNNP+SADGFTHIFNKVREERQG P QVPGTPN+RPQ  +GQ  DDKVQCCCFAWG K
Sbjct:    1 MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENADLSLDNPSSDHLPPTRPRANSEDQSGKGSLPLEDDPKHFVDSPARHDNVSSRSGSRSHGVGSAENRRRHSTQSTGSEYSIERSPLHRQARAPGRDSPQWEPKNSYDNSQGTPGRSRLRPVNRGDETPDKGAAVPKFGDWDVNNPSSADGFTHIFNKVREERQGVPGQVPGTPNERPQAIRGQSNDDKVQCCCFAWGGK 245
[Close]
BLAST of rna-XM_014661303.2 vs. UniProtKB/TrEMBL
Match: tr|C6TB99|C6TB99_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 422.55 bits (1085), Expect = 4.757e-148
Identity = 212/245 (86.53%), Postives = 227/245 (92.65%), Query Frame = 0 
Query:    1 MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENSDLGLDNPSSEQLPPSKPRVSSEDPSGKGSLPLEDDPKHFIDSPARHDNVSNRTSSRSHGVTSADNRRRHSTQSVGSDHSIERSPLHRQARPPGRDSPQWEPKNSYDNIQGTPGRSRLRQANRGDETPDKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPAQVPGTPNDRPQHNKGQFTDDKVQCCCFAWGKK 245
            MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEEN+DL LDNPSS+ LPP++PR +SED SGKGSLPLEDDPKHF+DSPARHDNVS+R+ SRSHGV SA+NRRRHSTQS GS++SIERSPLHRQAR PGRDSPQWEPKNS+DN QGTPGRSRLR  NRGDETPDKGAAVPKFGDWDVNNP+SADGFTHIFNKVREERQG P QVPGTPN+RPQ  +GQ  DDKVQCCCFAWG K
Sbjct:    1 MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENADLSLDNPSSDHLPPTRPRANSEDQSGKGSLPLEDDPKHFVDSPARHDNVSSRSGSRSHGVGSAENRRRHSTQSTGSEYSIERSPLHRQARAPGRDSPQWEPKNSHDNSQGTPGRSRLRPVNRGDETPDKGAAVPKFGDWDVNNPSSADGFTHIFNKVREERQGVPGQVPGTPNERPQAIRGQSNDDKVQCCCFAWGGK 245
[Close]
BLAST of rna-XM_014661303.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2PWS5|A0A0B2PWS5_GLYSO (RPM1-interacting protein 4 OS=Glycine soja OX=3848 GN=glysoja_049893 PE=4 SV=1)

HSP 1 Score: 416.001 bits (1068), Expect = 1.423e-145
Identity = 211/245 (86.12%), Postives = 224/245 (91.43%), Query Frame = 0 
Query:    1 MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENSDLGLDNPSSEQLPPSKPRVSSEDPSGKGSLPLEDDPKHFIDSPARHDNVSNRTSSRSHGVTSADNRRRHSTQSVGSDHSIERSPLHRQARPPGRDSPQWEPKNSYDNIQGTPGRSRLRQANRGDETPDKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPAQVPGTPNDRPQHNKGQFTDDKVQCCCFAWGKK 245
            MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTG RIINPNDPEEN+DL  DNPSS+ LPP++PR +SED SGKGSL LEDDPK+FI+SPARHDNVS+R+ SRSHGV SADNRRRHSTQS GS++SIERSPLHRQAR PGRDSPQWEPKNSYD+ QGTPGRSRLR ANRGDETPDKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGP QVPGTPN+RPQ   G   DDKVQCCCFAWG K
Sbjct:    1 MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGTRIINPNDPEENADLSFDNPSSDNLPPTRPRTNSEDQSGKGSLHLEDDPKNFIESPARHDNVSSRSGSRSHGVGSADNRRRHSTQSTGSEYSIERSPLHRQARAPGRDSPQWEPKNSYDSSQGTPGRSRLRPANRGDETPDKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPGQVPGTPNERPQPINGLSNDDKVQCCCFAWGGK 245
[Close]
BLAST of rna-XM_014661303.2 vs. UniProtKB/TrEMBL
Match: tr|C6TH04|C6TH04_SOYBN (RINb protein OS=Glycine max OX=3847 GN=100808509 PE=2 SV=1)

HSP 1 Score: 416.001 bits (1068), Expect = 1.423e-145
Identity = 211/245 (86.12%), Postives = 224/245 (91.43%), Query Frame = 0 
Query:    1 MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENSDLGLDNPSSEQLPPSKPRVSSEDPSGKGSLPLEDDPKHFIDSPARHDNVSNRTSSRSHGVTSADNRRRHSTQSVGSDHSIERSPLHRQARPPGRDSPQWEPKNSYDNIQGTPGRSRLRQANRGDETPDKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPAQVPGTPNDRPQHNKGQFTDDKVQCCCFAWGKK 245
            MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTG RIINPNDPEEN+DL  DNPSS+ LPP++PR +SED SGKGSL LEDDPK+FI+SPARHDNVS+R+ SRSHGV SADNRRRHSTQS GS++SIERSPLHRQAR PGRDSPQWEPKNSYD+ QGTPGRSRLR ANRGDETPDKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGP QVPGTPN+RPQ   G   DDKVQCCCFAWG K
Sbjct:    1 MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGTRIINPNDPEENADLSFDNPSSDNLPPTRPRTNSEDQSGKGSLHLEDDPKNFIESPARHDNVSSRSGSRSHGVGSADNRRRHSTQSTGSEYSIERSPLHRQARAPGRDSPQWEPKNSYDSSQGTPGRSRLRPANRGDETPDKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPGQVPGTPNERPQPINGLSNDDKVQCCCFAWGGK 245
The following BLAST results are available for this feature:
BLAST of rna-XM_014661303.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
sp|Q8GYN5|RIN4_ARATH1.131e-4542.86RPM1-interacting protein 4 OS=Arabidopsis thaliana... [more]
sp|Q8S3M3|NOIL_ELAOL4.788e-1161.70NOI-like protein OS=Elaeis oleifera OX=80265 PE=2 ... [more]
sp|O22633|NOI4_ARATH3.062e-1060.87Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NO... [more]
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BLAST of rna-XM_014661303.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 6
Match NameE-valueIdentityDescription
AT3G25070.21.318e-4742.75| RPM1 interacting protein 4 | Chr3:9132891-913374... [more]
AT3G25070.11.157e-4642.86| RPM1 interacting protein 4 | Chr3:9132458-913374... [more]
AT2G04410.14.395e-1250.00| RPM1-interacting protein 4 (RIN4) family protein... [more]
AT5G55850.11.971e-1162.22| RPM1-interacting protein 4 (RIN4) family protein... [more]
AT5G55850.33.133e-1160.87| RPM1-interacting protein 4 (RIN4) family protein... [more]
AT5G55850.24.921e-1162.22| RPM1-interacting protein 4 (RIN4) family protein... [more]
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BLAST of rna-XM_014661303.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3VF94|A0A1S3VF94_VIGRR7.821e-180100.00RPM1-interacting protein 4 OS=Vigna radiata var. r... [more]
tr|A0A0S3SW63|A0A0S3SW63_PHAAN3.887e-17898.78Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0L9VTB2|A0A0L9VTB2_PHAAN3.887e-17898.78Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A4D6MXL2|A0A4D6MXL2_VIGUN4.380e-16797.88RPM1-interacting protein 4 OS=Vigna unguiculata OX... [more]
tr|V7AKN6|V7AKN6_PHAVU5.133e-15589.43Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|D8WJ54|D8WJ54_SOYBN4.217e-14986.94RIN4a protein OS=Glycine max OX=3847 GN=RIN4a PE=2... [more]
tr|A0A0B2RTN6|A0A0B2RTN6_GLYSO4.217e-14986.94RPM1-interacting protein 4 OS=Glycine soja OX=3848... [more]
tr|C6TB99|C6TB99_SOYBN4.757e-14886.53Uncharacterized protein OS=Glycine max OX=3847 PE=... [more]
tr|A0A0B2PWS5|A0A0B2PWS5_GLYSO1.423e-14586.12RPM1-interacting protein 4 OS=Glycine soja OX=3848... [more]
tr|C6TH04|C6TH04_SOYBN1.423e-14586.12RINb protein OS=Glycine max OX=3847 GN=100808509 P... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008700RIN4, pathogenic type III effector avirulence factor Avr cleavage sitePFAMPF05627AvrRpt-cleavagecoord: 174..209
e-value: 2.8E-23
score: 81.0
coord: 3..32
e-value: 7.0E-5
score: 22.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..107
IPR040387RPM1-interacting protein 4/NOI4PANTHERPTHR33159RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEINcoord: 6..228

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_014661303.2_VrVC1973A-SNU_v1 ID=rna-XM_014661303.2_VrVC1973A-SNU_v1; Name=rna-XM_014661303.2; organism=Vigna radiata; type=mRNA; length=738bp
ATGGCACAACGTTCTCATGTACCCAAATTTGGCAATTGGGATAGTGGAGA
GAATGTTCCTTATACAGCATATTTTGACAAGGCCCGGAAAGGCCGAACTG
GTGCAAGAATAATAAATCCAAATGACCCTGAAGAAAATTCTGATTTAGGT
CTTGACAATCCATCATCTGAGCAACTACCTCCATCCAAACCCAGAGTTAG
TTCAGAGGATCCATCTGGAAAGGGATCACTGCCTTTGGAAGATGATCCTA
AGCATTTCATTGACTCTCCAGCTCGTCATGACAATGTAAGCAATAGGACT
AGCAGCAGAAGTCACGGAGTAACTTCTGCCGATAACCGTAGAAGACATTC
TACGCAAAGTGTTGGGTCTGACCACAGCATTGAGCGTTCACCACTTCATC
GCCAGGCCAGACCCCCTGGCAGAGACAGTCCCCAATGGGAACCAAAGAAT
TCATATGACAACATCCAGGGAACACCAGGGAGATCTCGGTTAAGACAGGC
TAACAGGGGAGATGAAACACCAGATAAAGGTGCAGCTGTTCCTAAGTTTG
GTGACTGGGATGTGAACAACCCAGCCTCAGCAGATGGCTTTACACACATT
TTCAACAAAGTGAGGGAGGAGAGACAGGGAGGGCCGGCACAAGTTCCGGG
CACGCCTAACGATAGACCACAACATAACAAGGGCCAATTCACTGATGACA
AAGTCCAGTGTTGCTGCTTTGCCTGGGGCAAAAAATGA
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protein sequence of rna-XM_014661303.2_VrVC1973A-SNU_v1

>rna-XM_014661303.2_VrVC1973A-SNU_v1 ID=rna-XM_014661303.2_VrVC1973A-SNU_v1; Name=rna-XM_014661303.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=245bp
MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENSDLG
LDNPSSEQLPPSKPRVSSEDPSGKGSLPLEDDPKHFIDSPARHDNVSNRT
SSRSHGVTSADNRRRHSTQSVGSDHSIERSPLHRQARPPGRDSPQWEPKN
SYDNIQGTPGRSRLRQANRGDETPDKGAAVPKFGDWDVNNPASADGFTHI
FNKVREERQGGPAQVPGTPNDRPQHNKGQFTDDKVQCCCFAWGKK
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mRNA from alignment at chr09:13862293..13868322+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_014661303.2_VrVC1973A-SNU_v1 ID=rna-XM_014661303.2_VrVC1973A-SNU_v1; Name=rna-XM_014661303.2; organism=Vigna radiata; type=mRNA; length=6030bp; location=Sequence derived from: chr09:13862293..13868322+ (Vigna radiata
CAtattttactttgaaaaaaTCTTAAAGCTGTGTACGACTTCGCGAGGTG
TAAGAGATTTGaaacagagaagaaaaacattgaaattACAGACAGGAAAA
TAATAGTCAAACATTACCGGTGGCGCCGGTCAACGGTTGATAAACCTCTC
TCTCTAAAGctctctccttctctctcttgCTGGGTCTTTGAATTCTGTGG
AGGAGCTTTTTGGGTTCTCTCAATTTTTACCTCATCTGGGTCTGACCGAA
AAggctgaatttttttttttggttttcagGGAAAAATTTCTGCTTTTCCA
TTTCTGGGTTTCCAAGCTTGGTTTAGAAAGAAATGGcagtaagtattttt
tttttctattatattttctttttcattttggtatGGTTTGGTTGTTTttc
atgtgtgtgtgtgattgcTGTGAAAATTGTGGAGAAGGGTAAGGGAATCT
CAGCttggtttcaatttcttccaATATTATGGTGTGTATCATCCTGTGTT
TGGTgaagtttttcttcttcactgtttATCTCTTTTGTTCATCTTCTCAA
GCTTTGATATATGGTTGACCAAACTTAGGGGCTTGCTCTTTTTGGTCAAC
TCTGTCTCTCCACACACAAATCAGCCATTAGCAGCTTTATCTTACTGCTT
CTTGGAAGCATATGAAGCAATAAAGTCGGGATCTTATTGagtggagtttt
ttttttttttttttgtttgtttgtttagtCCGGTAGTTTCGCAAATCATG
TTTCGTTAACAATTTGACAGCGTTGTGATTACTGAATGGAGGCTTGTTTC
AGTTCTGCCTTATTCTTTGTTCGGCGTGGATCATGTAACTATACAGTGAA
ATTTGCTGTTTGATGTGTTTGAGACTTGTTAGTATTGTTTTGGATGAATC
TAAATATGACAAATTGAGGTTCTTTTGCGATGATTCCAcgtttaatttat
agaaataaagcGTATGAATTGCAGTGTTCACTTCAGAATTTGTTGCATTG
GATTTGTACTCTTTGTTTTTCTGACTTAGAAGGGAATATGCACATGGGTT
TTGTTAACTATGGTTTTGGTGTCTAAATGTTTACATCAGTAAGTGTTACG
TATGAAATGCATATTTTTTTCTGGAGATAAGATCTGCAATGTTAAATGGT
ATTGTATGTTGAGCAGTTAAGCGCAAAAAAGAGTTGAAATGTCAGTTCTA
TGCTTGCCATTGAGTTGAGGTTGGTTAAAGGCCGGTCTTATATATGGCTA
GAAAGTGATTCTATAATAGTGGTTACTTCCTTCGGTAACCCTAATATTGT
TCCTTGGTGTTATAGAAGGAGATGGAAGCACTGCATAGCTATGAGTAAAT
GTTCAACTTTTAAAGTTTCAAGTATTGTTAGAGAAGGGAATAAATGTGTT
GATAGTCTTGCAAGCATTGAGGTGGATTTGAAGCAAGATTTCACTTGGTA
TGAAAATATACCTGATTGTATTAGGCATGACggttagaagtggattttaa
gtttaattcaaccttaaaaaatcggtttgtaaggtgaggtttacacctac
ttatatatactgaattggtcttatctctagtcgatgtcaGACTTCCAACA
ATGACTTTTTTAGGAACAAGTTTGGATTACTTGTTGTATAGAATTTTCTG
ATTCCATGGGTTTTGGTTTGGCTCTCCCATGCTTGTTTGTattctgtttc
tgttttttttacCCATCCTCAGCAAGCATATGATTGTTGAGGGATGAGGT
GCTAACCTAGTTGGATGTCATTCCCTTATAATGATGTTATTTTGTTgcct
tttatgaaaaaaaaaaggatgagtATACTATTGTTGCAAAACCAGTCCTA
attgttataattgattaattaattgtcactGCCTAATTGCATTTTGGTTC
TTAAATTTAGATTCAAGAGCCCATTTCCTCAAAGATCAACACGAACTCAA
TGTGGAGTTGGTCTACATGTTATGTTTAACATgtcacatttttaatttta
tacatttcaGATGTTAAAAAACAaggacaagatacacaacagcTTGTGTC
caatattttttcttgataGTTAAATGGTGCACAGAAATAGGATAATTTGA
TAGCTCTTACTAAAATATATCTGAACAATCTCGATTTTGGTGTGGTATGT
TAAGGGGGGCCAAATACTGATTTTATGACTTTTTAAGGAATTAAAATAGT
TGCGATTTTTATGGTCGAATACCATAAATTCCCTGCTAGAGTTTagcaaa
aagagtagaaaacattattttaagatttatttggAAAGAGAGAAATGAAT
TTCAGATATGGATTGACATTTATGAAGGCCAATTTTCCACTTTCAGCTGT
TCTATCATTTTCATGTTCCAAAGCCCTATGTAGCATACGCATTAGGAGGT
TATCAAGAAAGTTATTATAGAGCATTCTGGAAACAAGGATGTGTATGAAT
AAGTTGTCTTTTGATATGTGATGACATTTCTTGAGAAGTAGGAACTTGTC
TTTGACAATAGACAGAAAGGAATTCACCTTCTACATTTATATGACAAGCC
ATAATACGTGTTTGTATAACTTGTGAGTCCATAAACGGATAAGTGATTAC
AGTGACAAGGTTTTGATGATTTATGAGGAAGAAAGCAAATTGAACTTGTA
CATGTACAAgggagtttattttatttatcatctcATTGTTTTTCCCAACG
TGTTTCTCATCACAAAACATTTAGGTTTGGAGTTGCTTTTAATGTCTAGG
TCAGATCAAGATTTTTCCATATATTTTGTACTAAAATGTAAAAGATTGGA
AAATTGTGATAATCATGTATTGTAATTTGCAGTCAACAATGACTTATTTT
TTGTACAGTAACAGTTACTAACCTACAAAGAACTTTGGCAACAAAATTTT
CCGATTGCttctgtttctttatttttatttttcattaaaaacacATCTGA
AATCATGTTTGAGCCAAAATGGCCATACATGAAACGGATAATTACATAAA
CATTCCTTCATGGGCAGAGGAACAACTTTTGGCCTTAGCATTTGTTTATC
TAGAGTGCTACACGAATTTACACACTCTGTTTGGACAAGGAAAGTAATaa
ctaatatgaaaaaaaaagaagaaaatagatatcatgagaaaaaagagagt
agaTTTTTAAGTTGTctgcattaagaaaaaaagataaaggagaaaagtTG
TGTTCTTCCTTTGCTTGTTTAATTGGATGGAAGAGTGAATAAGAAGTTTC
TTTGCATATGATGACATTTataccctttctttttcatatttctaaaataa
tgtataatatgttatataaaattgtcatttcatttaatttaattagtatg
TGTAGATCGTTATTGTTGAAGATCTCACATCATTTAGagatataacaaaa
ttatagtatataaatgagtGCAAATCTTACCTTATAACATAATTTTGTGA
GATTAAGATAGAGTTAAAGTTCATTTTCTAAGAGTTATATTTGTcacatt
atttcttttcttgggCATTTGATGAGAAAATTATGCACAAAACCCAGTGT
TTTTTCCTTGTTTGCTTTGCTTTTTTCCTTACTAACAACCAGTGAAAAAC
ACTACTTTGCTATTTGGCTGTTTCTTTCCTGCTTTAGTGTATGCACTATT
GCATTCTATCAAATAAAGTTATGTGAATACCATAAGTTGGTCTTATTGGG
AATGCCTGACCTTACACAGTATTTCTTGAGGAAATGCAAAAGGAACTTCT
AAACTCAATTAGGTTGTTCCTTTTATTTAAGTTGTGAGTGCTTGTGCTGT
TACTTTGGTACCCGGTTGGAAGCTAGTGTCTGAGATTGAAGATTGCACTT
TATATTATAGTTGGACATAGCATATTTTGGAGTGTTATCCATTTAATTTT
GAGATTGAGTTTTCTTTGAGATTTTATCCCTTTATTCCATGATACTGGAA
GATTTGGTGTGATCTACACCAGCTTGCTAAAAGGGTAGCAGTTACCTGAC
GTTGCTGATATCTTTGATAATCAATTTTGTGGCCTTACCTGACAGTAACA
ATGTGTATCCCCTTTAGCATTGAAACAAAAGGAGCATTACTactttttgg
ttgttatttGCTTTGCTAATGATTCTGATTCTTGATTATGAGTAGGGATA
GGATATTTTCTGGTGTTTATTTATTCAAACTTTGCTTGACAAGCTTTTCT
GAATGTGACACTTCTGCAGCAACGTTCTCATGTACCCAAATTTGGCAATT
GGGATAGTGGAGAGAATGTTCCTTATACAGCATATTTTGACAAGGCCCGG
AAAGGCCGAACTGGTGCAAGAATAATAAATCCAAATGACCCTGAAGAAAA
TTCTGATTTAGGTCTTGACAATCCATCATCTGAGCAACTACCTCCATCCA
AACCCAGAGTTAGTTCAGAGGATCCATCTGGAAAGGGATCACTGCCTTTG
GAAGATGATCCTAAGCATTTCATTGACTCTCCAGCTCGTCATGACAATGT
AAGCAATAGGACTAGCAGCAGAAGTCACGGAGTAACTTCTGCCGATAACC
GTAGAAGACATTCTACGCAAAGTGTTGGGTCTGACCACAGCATTGAGCGT
TCACCACTTCATCGCCAGGCCAGACCCCCTGGCAGAGACAGTCCCCAATG
GGAACCAAAGAATTCATATGACAACATCCAGGGAACACCAGGGAGATCTC
GGTTAAGACAGGCTAACAGGGGAGATGAAACAGTTAGTTTCCTTTTCTAC
TTCCTTTGTTTTACCATGCATGGcttgataaaaagaaatagaaattttGT
ACATGTAGTAAGTAGGCCAAAATAGTATTCATAAAAATTTGGTCTTTAAC
TAGATCTATTGGCATTATGTGATTAATGTATCAATGTAGTCAACCTCAGG
GATTAGGATCTGTTATTGTTAAAAGGCAGCTCAATGTCTGAGGGTCCAAA
TTTTTTCagttactttttctttctgtaTTTGTGTCTGCAGAGAATCTGTT
TCCCACAAACTGACCTAGTTGGATAAGGCCTTTGTTGTTGTTTCTTCTAT
AGTACCAAAAATTTGACCTTGTTGGTGAGATTTTCTTTTGGTGAAACACC
ATCTTTATGATTTTGACATTCTGACAATGCAGCCAGATAAAGGTGCAGCT
GTTCCTAAGTTTGGTGACTGGGATGTGAACAACCCAGCCTCAGCAGATGG
CTTTACACACATTTTCAACAAAGTGAGGGAGGAGAGACAGGGAGGGCCGG
CACAAGTTCCGGGCACGCCTAACGATAGACCACAACATAACAAGGGCCAA
TTCACTGATGACAAAGTCCAGGTACTCCTGCTACACCTGACTTACAGTGA
GATATTAGAGATTTGTTTGAACGAGCTTCTCCATAAGTACTTCTagatga
gaaaaataagaagaaaaagtgaaatgATCTCTTTCAccagttaaaattag
tttatgtacatgttagaagtaaaaatatataagaatccATGAGAGAGTTT
CTACATATAAAAAGAAGatgattttaacttttgttCTTATTGTTCCGTTT
TAGAAGTACTTATTCCAAACAAACCTTAGATGTGTTAGTTTTGAGTTTCT
ACATACTAATGCTTATCTTCTGCCATTTCTTCCTTCTTCAGTGTTGCTGC
TTTGCCTGGGGCAAAAAATGATTTCTTGGACTTGAAGTGTGAATGATGTT
AAAGATACTTTTGTGAATGGTCATGAGGTGTGTGTAATTCTTGTACATAT
CCAAGGCTCTATCTCCGGAAGAAGACATCAATGAAGTAAATTTATTGCAG
CTACTTTGtgccatttcattttctttttgtttctttctaatATTCAACAA
GATTGTGTTACTCTTATGCAACTCTCTGCTCTCTGCATGCAAGattgtga
tttttctttgtcCTTTTTGCTCTTATTGAGCCTTCTGTTGTGCCACTGTT
ATGCTTTACAATTCAAATTAACTGTATGTACCTGAGATATAGAAGGAGAT
TGGTTATATAATTCTTTTCCATTGAATTCA
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Coding sequence (CDS) from alignment at chr09:13862293..13868322+

>rna-XM_014661303.2_VrVC1973A-SNU_v1 ID=rna-XM_014661303.2_VrVC1973A-SNU_v1; Name=rna-XM_014661303.2; organism=Vigna radiata; type=CDS; length=738bp; location=Sequence derived from: chr09:13862293..13868322+ (Vigna radiata
ATGGcaCAACGTTCTCATGTACCCAAATTTGGCAATTGGGATAGTGGAGA
GAATGTTCCTTATACAGCATATTTTGACAAGGCCCGGAAAGGCCGAACTG
GTGCAAGAATAATAAATCCAAATGACCCTGAAGAAAATTCTGATTTAGGT
CTTGACAATCCATCATCTGAGCAACTACCTCCATCCAAACCCAGAGTTAG
TTCAGAGGATCCATCTGGAAAGGGATCACTGCCTTTGGAAGATGATCCTA
AGCATTTCATTGACTCTCCAGCTCGTCATGACAATGTAAGCAATAGGACT
AGCAGCAGAAGTCACGGAGTAACTTCTGCCGATAACCGTAGAAGACATTC
TACGCAAAGTGTTGGGTCTGACCACAGCATTGAGCGTTCACCACTTCATC
GCCAGGCCAGACCCCCTGGCAGAGACAGTCCCCAATGGGAACCAAAGAAT
TCATATGACAACATCCAGGGAACACCAGGGAGATCTCGGTTAAGACAGGC
TAACAGGGGAGATGAAACACCAGATAAAGGTGCAGCTGTTCCTAAGTTTG
GTGACTGGGATGTGAACAACCCAGCCTCAGCAGATGGCTTTACACACATT
TTCAACAAAGTGAGGGAGGAGAGACAGGGAGGGCCGGCACAAGTTCCGGG
CACGCCTAACGATAGACCACAACATAACAAGGGCCAATTCACTGATGACA
AAGTCCAGTGTTGCTGCTTTGCCTGGGGCAAAAAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR008700TypeIII_avirulence_cleave
IPR040387RIN4/NOI4