rna-XM_004497559.3

Transcript Overview
Namerna-XM_004497559.3
Unique Namerna-XM_004497559.3_CaCDCfrontier-NCBI_v1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length711
Productputative homeobox-leucine zipper protein ATHB-51
References
External references for this mRNA
DatabaseAccession
GeneID101490599
GenBankXM_004497559.3
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr4chromosomechr4:21829582..21831695 -Cicer arietinum CDC Frontier NCBI RefSeq v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
cacanL085Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cacanL131Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascanL346Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ancanL0639Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0648Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0838Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cancanL087Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
caicanL0322Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancanL1094Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caicanL0465Cicer arietinum ICC 4958 genome v2Cicer arietinum
canccR0449Cajanus cajan Asha genome v1.0Cajanus cajan
canccR0516Cajanus cajan Asha genome v1.0Cajanus cajan
cancrR324Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cancrR415Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
canvrvR257Vigna radiata cv. VC1973A genome v6.0Vigna radiata
canpvR265Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cantifR238Vicia faba cv. Tiffany genome v1.0Vicia faba
canvfhR247Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cantifR282Vicia faba cv. Tiffany genome v1.0Vicia faba
canvrvR341Vigna radiata cv. VC1973A genome v6.0Vigna radiata
canpvR358Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvfhR296Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canvssR325Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR360Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvuaR199Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR213Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canzwsR214Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuaR251Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR270Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canzwsR242Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canzwsR253Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canpsR267Pisum sativum Cameor genome v1aPisum sativum
canpsR295Pisum sativum Cameor genome v1aPisum sativum
canpsR369Pisum sativum Cameor genome v1aPisum sativum
avjcanL314Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL407Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cancarR195Cicer arietinum
cancarR212Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
LR48_mrnaVigan02g076300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-XM_014657746.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Tiffany.R1.5g116480.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vfaba.Hedin2.R1.5g144640.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-XM_014640211.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg1213.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.3g045240.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.3g036640.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Phvul.001G184800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-KK1_010195Cajanus cajan Asha genome v1.0Cajanus cajan
Vigun01g167900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Va03G074040.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Va02G019020.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Psat06G0211600-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Cr_08542.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Psat03G0145500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigun07g065100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Phvul.007G224800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Psat3g036880.1Pisum sativum Cameor genome v1aPisum sativum
jg31870.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.model.Chr01.1607Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Cr_05353.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
evm.model.Chr07.2168Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Ca_00750Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Ca_07812.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_11764.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_20151Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-XM_004494069.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC101490599gene-LOC101490599_CaCDCfrontier-NCBI_v1Cicer arietinumgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_004497559.3_CaCDCfrontier-NCBI_v1rna-XM_004497559.3_CaCDCfrontier-NCBI_v1Cicer arietinumpolypeptide
rna-XM_004497559.3_CaCDCfrontier-NCBI_v1rna-XM_004497559.3_CaCDCfrontier-NCBI_v1-proteinCicer arietinumpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_004497559.3-3exon-XM_004497559.3-3_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004497559.3-2exon-XM_004497559.3-2_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004497559.3-1exon-XM_004497559.3-1_CaCDCfrontier-NCBI_v1Cicer arietinumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_004497616.1cds-XP_004497616.1_CaCDCfrontier-NCBI_v1_3Cicer arietinumCDS
cds-XP_004497616.1cds-XP_004497616.1_CaCDCfrontier-NCBI_v1_2Cicer arietinumCDS
cds-XP_004497616.1cds-XP_004497616.1_CaCDCfrontier-NCBI_v1Cicer arietinumCDS


Homology
[Close]
BLAST of rna-XM_004497559.3 vs. Araport11
Match: | (Symbols: ATHB51, LMI1, HB51 | homeobox 51, LATE MERISTEM IDENTITY1 | chr5:1004985-1006373 FORWARD LENGTH=235)

HSP 1 Score: 160.229 bits (404), Expect = 1.184e-48
Identity = 109/254 (42.91%), Postives = 147/254 (57.87%), Query Frame = 0 
Query:    1 MEWNCNT------THFLHPP---DSSLSFLYNYNQTSFQGMEVK----QQGSTETVLEMEKMM---KYGNQD----KKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQFDVVSKEKQQLQDEVMKLKGMLKEQGSSSSCGKTQVSAVDYHYREMSGEETETIESTSEAALFGSNRVREKIHHHLNNAGGNFCFNMENNYNMNNTVPVLPY---WPAVP 231
            MEW+  +        F+ PP    SS + L+++N   + G        Q G   +V E EK+M   ++ N +    KKKRLTS QL +LE SFQ+EIKLD  RK+KLS+ELGLQPRQIAVWFQNRR+RWK K LEQLYD L+ ++DVVS+EKQ L DEV KL+ +L++QG      K Q+SA      ++SGEE +T+E +S   +    R      + +   GGN  +   NN       P+L     WP+ P
Sbjct:    1 MEWSTTSNVENVRVAFMPPPWPESSSFNSLHSFNFDPYAGNSYTPGDTQTGPVISVPESEKIMNAYRFPNNNNEMIKKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQLYDSLRQEYDVVSREKQMLHDEVKKLRALLRDQG----LIKKQISAGTI---KVSGEE-DTVEISS--VVVAHPRTENMNANQI--TGGNQVYGQYNN-------PMLVASSGWPSYP 235
[Close]
BLAST of rna-XM_004497559.3 vs. Araport11
Match: | (Symbols: ATHB51, LMI1, HB51 | homeobox 51, LATE MERISTEM IDENTITY1 | chr5:1004985-1006118 FORWARD LENGTH=193)

HSP 1 Score: 141.739 bits (356), Expect = 7.231e-42
Identity = 83/162 (51.23%), Postives = 105/162 (64.81%), Query Frame = 0 
Query:    1 MEWNCNT------THFLHPP---DSSLSFLYNYNQTSFQGMEVK----QQGSTETVLEMEKMM---KYGNQD----KKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQFDVVSKEKQQLQDEVMKL 142
            MEW+  +        F+ PP    SS + L+++N   + G        Q G   +V E EK+M   ++ N +    KKKRLTS QL +LE SFQ+EIKLD  RK+KLS+ELGLQPRQIAVWFQNRR+RWK K LEQLYD L+ ++DVVS+EKQ L DEV  L
Sbjct:    1 MEWSTTSNVENVRVAFMPPPWPESSSFNSLHSFNFDPYAGNSYTPGDTQTGPVISVPESEKIMNAYRFPNNNNEMIKKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQLYDSLRQEYDVVSREKQMLHDEVCVL 162
[Close]
BLAST of rna-XM_004497559.3 vs. Araport11
Match: | (Symbols: HB22, ATHB22 | homeobox protein 22, ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 22 | chr2:15349327-15350088 FORWARD LENGTH=185)

HSP 1 Score: 133.265 bits (334), Expect = 1.049e-38
Identity = 69/116 (59.48%), Postives = 89/116 (76.72%), Query Frame = 0 
Query:   53 GNQDKKKRLTSEQLETLESSFQKEIKLDPQRKMKL--------SKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQFDVVSKEKQQLQDEVMKLKGMLKEQGSSSSCGKTQV 160
            G + KKK++TSEQL+ LE SFQ+EIKL+P RKMKL        SKELGLQPRQIAVWFQNR++RWK K LE LY+ L+ +FD+VS+EK+ LQ+E+++LK M++E    SSC K Q 
Sbjct:   67 GQEKKKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKELGLQPRQIAVWFQNRKARWKNKQLEHLYESLRQEFDIVSREKELLQEELIQLKSMIRE---DSSCKKKQT 179
[Close]
BLAST of rna-XM_004497559.3 vs. Araport11
Match: | (Symbols: ATHB13 | | chr1:26259166-26260465 FORWARD LENGTH=294)

HSP 1 Score: 109.768 bits (273), Expect = 1.389e-28
Identity = 54/95 (56.84%), Postives = 71/95 (74.74%), Query Frame = 0 
Query:   56 DKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQFDVVSKE-------KQQLQDEVMKLK 143
            +KK+RL  EQ++TLE +F+   KL+P+RKM+L++ LGLQPRQIA+WFQNRR+RWKTK LE+ YD LK QFD +  E        Q+LQ E+M LK
Sbjct:   84 EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLK 178
[Close]
BLAST of rna-XM_004497559.3 vs. Araport11
Match: | (Symbols: HB5, ATHB-5, ATHB5 | homeobox protein 5 | chr5:26102457-26104217 REVERSE LENGTH=312)

HSP 1 Score: 108.227 bits (269), Expect = 9.324e-28
Identity = 60/142 (42.25%), Postives = 90/142 (63.38%), Query Frame = 0 
Query:   11 LHPPDSSLSFLY----NYNQTSFQGMEVKQQGSTETVLEMEKMMKYGNQDKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQFDVVSKEKQQLQDEVMKLKGMLKE 148
            + P  ++  FLY    +Y+Q  F  +E    GS E +  +         +KK+RL  EQ++ LE +F+ + KL+P+RK+KL++ELGLQPRQ+A+WFQNRR+RWKTK LE+ Y +LK  FD + + +  LQ +   L G +KE
Sbjct:   26 ISPRPTTTGFLYSGAGDYSQM-FDALE--DDGSLEDLGGVGHASSTA-AEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKE 163
[Close]
BLAST of rna-XM_004497559.3 vs. Araport11
Match: | (Symbols: HB5, ATHB-5, ATHB5 | homeobox protein 5 | chr5:26102457-26103854 REVERSE LENGTH=294)

HSP 1 Score: 107.457 bits (267), Expect = 1.148e-27
Identity = 60/142 (42.25%), Postives = 90/142 (63.38%), Query Frame = 0 
Query:   11 LHPPDSSLSFLY----NYNQTSFQGMEVKQQGSTETVLEMEKMMKYGNQDKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQFDVVSKEKQQLQDEVMKLKGMLKE 148
            + P  ++  FLY    +Y+Q  F  +E    GS E +  +         +KK+RL  EQ++ LE +F+ + KL+P+RK+KL++ELGLQPRQ+A+WFQNRR+RWKTK LE+ Y +LK  FD + + +  LQ +   L G +KE
Sbjct:    8 ISPRPTTTGFLYSGAGDYSQM-FDALE--DDGSLEDLGGVGHASSTA-AEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKE 145
[Close]
BLAST of rna-XM_004497559.3 vs. Araport11
Match: | (Symbols: HB-7, ATHB7, ATHB-7 | ARABIDOPSIS THALIANA HOMEOBOX 7, homeobox 7 | chr2:19165777-19166773 REVERSE LENGTH=256)

HSP 1 Score: 105.145 bits (261), Expect = 3.977e-27
Identity = 61/145 (42.07%), Postives = 89/145 (61.38%), Query Frame = 0 
Query:   39 STETVLEMEKMMKYG-NQDKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLE-------QLYDLLKHQFDVVSKEKQQLQDEVMKLKGMLKEQGSSSSC-GKTQVSAVDYHYREMSGEE 174
            S E  L M+KM K   N++ ++R + EQ+++LE  F+ E +L+P++K++L++ELGLQPRQ+A+WFQN+R+RWK+K LE       Q YD L  QF+ + KEKQ L  E +K     K Q     C G   V A+   + E   EE
Sbjct:   13 SAEPFLTMKKMKKSNHNKNNQRRFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLETEYNILRQNYDNLASQFESLKKEKQALVSERLKEATQKKTQEEERQCSGDQAVVALSSTHHESENEE 157
[Close]
BLAST of rna-XM_004497559.3 vs. Araport11
Match: | (Symbols: ATHB3, ATHB-3, HB-3, HAT7 | homeobox 3, HOMEOBOX FROM ARABIDOPSIS THALIANA 7 | chr5:4913951-4915609 REVERSE LENGTH=314)

HSP 1 Score: 105.916 bits (263), Expect = 5.357e-27
Identity = 53/91 (58.24%), Postives = 65/91 (71.43%), Query Frame = 0 
Query:   56 DKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQFDVVSKEKQQLQDEVMKLKGML 146
            +KKKRL  EQ+  LE SF+   KL+P+RKM+L+K LGLQPRQIA+WFQNRR+RWKTK LE+ YD LK QFDV+  +   L     KL   L
Sbjct:  114 EKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYDSLKKQFDVLKSDNDSLLAHNKKLHAEL 204
[Close]
BLAST of rna-XM_004497559.3 vs. Araport11
Match: | (Symbols: HB-7, ATHB7, ATHB-7 | ARABIDOPSIS THALIANA HOMEOBOX 7, homeobox 7 | chr2:19165777-19166773 REVERSE LENGTH=258)

HSP 1 Score: 104.375 bits (259), Expect = 7.463e-27
Identity = 62/147 (42.18%), Postives = 91/147 (61.90%), Query Frame = 0 
Query:   39 STETVLEMEKMMKYG-NQDKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLE-------QLYDLLKHQFDVVSKEKQQLQDEVMKLKGML--KEQGSSSSC-GKTQVSAVDYHYREMSGEE 174
            S E  L M+KM K   N++ ++R + EQ+++LE  F+ E +L+P++K++L++ELGLQPRQ+A+WFQN+R+RWK+K LE       Q YD L  QF+ + KEKQ L  E+ +LK     K Q     C G   V A+   + E   EE
Sbjct:   13 SAEPFLTMKKMKKSNHNKNNQRRFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLETEYNILRQNYDNLASQFESLKKEKQALVSELQRLKEATQKKTQEEERQCSGDQAVVALSSTHHESENEE 159
[Close]
BLAST of rna-XM_004497559.3 vs. Araport11
Match: | (Symbols: AT3G01472.1, HD-ZIP-1, CPuORF33, HAT5, ATHB-1, ATHB1, HB-1 | homeobox 1, conserved peptide upstream open reading frame 33, HOMEODOMAIN PROTEIN FROM ARABIDOIPSIS THALIANA 5, ARABIDOPSIS THALIANA HOMEOBOX 1 | chr3:182648-184034 REVERSE LENGTH=272)

HSP 1 Score: 103.99 bits (258), Expect = 1.738e-26
Identity = 47/71 (66.20%), Postives = 61/71 (85.92%), Query Frame = 0 
Query:   56 DKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQFD 126
            +KK+RLT+EQ+  LE SF+ E KL+P+RK +L+K+LGLQPRQ+AVWFQNRR+RWKTK LE+ YDLLK  +D
Sbjct:   67 EKKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSTYD 137
[Close]
BLAST of rna-XM_004497559.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LZR0|ATB51_ARATH (Putative homeobox-leucine zipper protein ATHB-51 OS=Arabidopsis thaliana OX=3702 GN=ATHB-51 PE=2 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 1.135e-47
Identity = 109/254 (42.91%), Postives = 147/254 (57.87%), Query Frame = 0 
Query:    1 MEWNCNT------THFLHPP---DSSLSFLYNYNQTSFQGMEVK----QQGSTETVLEMEKMM---KYGNQD----KKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQFDVVSKEKQQLQDEVMKLKGMLKEQGSSSSCGKTQVSAVDYHYREMSGEETETIESTSEAALFGSNRVREKIHHHLNNAGGNFCFNMENNYNMNNTVPVLPY---WPAVP 231
            MEW+  +        F+ PP    SS + L+++N   + G        Q G   +V E EK+M   ++ N +    KKKRLTS QL +LE SFQ+EIKLD  RK+KLS+ELGLQPRQIAVWFQNRR+RWK K LEQLYD L+ ++DVVS+EKQ L DEV KL+ +L++QG      K Q+SA      ++SGEE +T+E +S   +    R      + +   GGN  +   NN       P+L     WP+ P
Sbjct:    1 MEWSTTSNVENVRVAFMPPPWPESSSFNSLHSFNFDPYAGNSYTPGDTQTGPVISVPESEKIMNAYRFPNNNNEMIKKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQLYDSLRQEYDVVSREKQMLHDEVKKLRALLRDQG----LIKKQISAGTI---KVSGEE-DTVEISS--VVVAHPRTENMNANQI--TGGNQVYGQYNN-------PMLVASSGWPSYP 235
[Close]
BLAST of rna-XM_004497559.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q4PSR7|ATB22_ARATH (Homeobox-leucine zipper protein ATHB-22 OS=Arabidopsis thaliana OX=3702 GN=ATHB-22 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.005e-37
Identity = 69/116 (59.48%), Postives = 89/116 (76.72%), Query Frame = 0 
Query:   53 GNQDKKKRLTSEQLETLESSFQKEIKLDPQRKMKL--------SKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQFDVVSKEKQQLQDEVMKLKGMLKEQGSSSSCGKTQV 160
            G + KKK++TSEQL+ LE SFQ+EIKL+P RKMKL        SKELGLQPRQIAVWFQNR++RWK K LE LY+ L+ +FD+VS+EK+ LQ+E+++LK M++E    SSC K Q 
Sbjct:   67 GQEKKKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKELGLQPRQIAVWFQNRKARWKNKQLEHLYESLRQEFDIVSREKELLQEELIQLKSMIRE---DSSCKKKQT 179
[Close]
BLAST of rna-XM_004497559.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q6K498|HOX4_ORYSJ (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX4 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 7.658e-30
Identity = 59/145 (40.69%), Postives = 92/145 (63.45%), Query Frame = 0 
Query:   17 SLSFLYNYNQTSFQGMEVKQQGSTETVLEMEKMMKYGNQDKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQF-------DVVSKEKQQLQDEVMKLKGMLKEQGSSSS 154
            SL  + N +   + G+ ++ +G  E     E M   G  +KK+RL+ EQ+  LE SF+ E KL+P+RK +L+++LGLQPRQ+AVWFQNRR+RWKTK LE+ Y  L+H +       D + ++K  L  E+ +LK  L ++ +++S
Sbjct:   15 SLVTMANSSDDGYGGVGMEAEGDVEE----EMMACGGGGEKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAKLGDEEAAAS 155
[Close]
BLAST of rna-XM_004497559.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9XH37|HOX4_ORYSI (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica OX=39946 GN=HOX4 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 7.658e-30
Identity = 59/145 (40.69%), Postives = 92/145 (63.45%), Query Frame = 0 
Query:   17 SLSFLYNYNQTSFQGMEVKQQGSTETVLEMEKMMKYGNQDKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQF-------DVVSKEKQQLQDEVMKLKGMLKEQGSSSS 154
            SL  + N +   + G+ ++ +G  E     E M   G  +KK+RL+ EQ+  LE SF+ E KL+P+RK +L+++LGLQPRQ+AVWFQNRR+RWKTK LE+ Y  L+H +       D + ++K  L  E+ +LK  L ++ +++S
Sbjct:   15 SLVTMANSSDDGYGGVGMEAEGDVEE----EMMACGGGGEKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAKLGDEEAAAS 155
[Close]
BLAST of rna-XM_004497559.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q6Z248|HOX20_ORYSJ (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX20 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 7.267e-28
Identity = 52/106 (49.06%), Postives = 76/106 (71.70%), Query Frame = 0 
Query:   56 DKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLE-------QLYDLLKHQFDVVSKEKQQLQDEVMKLKGMLKEQGSSSS 154
            +KK+RL+ EQ+  LE SF+ E KL+P+RK +L+++LGLQPRQ+AVWFQNRR+RWKTK LE       Q YD L+   D + ++K  L  E+ +LKG L ++ +++S
Sbjct:   42 EKKRRLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDALRRDKDALLAEIKELKGKLGDEDAAAS 147
[Close]
BLAST of rna-XM_004497559.3 vs. UniProtKB/Swiss-Prot
Match: sp|A2YWC0|HOX20_ORYSI (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. indica OX=39946 GN=HOX20 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 7.267e-28
Identity = 52/106 (49.06%), Postives = 76/106 (71.70%), Query Frame = 0 
Query:   56 DKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLE-------QLYDLLKHQFDVVSKEKQQLQDEVMKLKGMLKEQGSSSS 154
            +KK+RL+ EQ+  LE SF+ E KL+P+RK +L+++LGLQPRQ+AVWFQNRR+RWKTK LE       Q YD L+   D + ++K  L  E+ +LKG L ++ +++S
Sbjct:   42 EKKRRLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDALRRDKDALLAEIKELKGKLGDEDAAAS 147
[Close]
BLAST of rna-XM_004497559.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q8LC03|ATB13_ARATH (Homeobox-leucine zipper protein ATHB-13 OS=Arabidopsis thaliana OX=3702 GN=ATHB-13 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.344e-27
Identity = 54/95 (56.84%), Postives = 71/95 (74.74%), Query Frame = 0 
Query:   56 DKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQFDVVSKE-------KQQLQDEVMKLK 143
            +KK+RL  EQ++TLE +F+   KL+P+RKM+L++ LGLQPRQIA+WFQNRR+RWKTK LE+ YD LK QFD +  E        Q+LQ E+M LK
Sbjct:   84 EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLK 178
[Close]
BLAST of rna-XM_004497559.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q8S7W9|HOX21_ORYSJ (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX21 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 6.001e-27
Identity = 52/96 (54.17%), Postives = 70/96 (72.92%), Query Frame = 0 
Query:   56 DKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQFDVVSKE-------KQQLQDEVMKLKG 144
            +KK+RL  EQ+ TLE +F+   KL+P+RKM+L++ LGLQPRQ+A+WFQNRR+RWKTK LE+ YD LK Q D V  E        ++LQ E++ LKG
Sbjct:  129 EKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDALKRQLDAVKAENDALLNHNKKLQAEIVALKG 224
[Close]
BLAST of rna-XM_004497559.3 vs. UniProtKB/Swiss-Prot
Match: sp|A2XD08|HOX21_ORYSI (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. indica OX=39946 GN=HOX21 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 7.735e-27
Identity = 52/96 (54.17%), Postives = 70/96 (72.92%), Query Frame = 0 
Query:   56 DKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQFDVVSKE-------KQQLQDEVMKLKG 144
            +KK+RL  EQ+ TLE +F+   KL+P+RKM+L++ LGLQPRQ+A+WFQNRR+RWKTK LE+ YD LK Q D V  E        ++LQ E++ LKG
Sbjct:  123 EKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDALKRQLDAVKAENDALLNHNKKLQAEIVALKG 218
[Close]
BLAST of rna-XM_004497559.3 vs. UniProtKB/Swiss-Prot
Match: sp|P46667|ATHB5_ARATH (Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana OX=3702 GN=ATHB-5 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 9.036e-27
Identity = 60/142 (42.25%), Postives = 90/142 (63.38%), Query Frame = 0 
Query:   11 LHPPDSSLSFLY----NYNQTSFQGMEVKQQGSTETVLEMEKMMKYGNQDKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQFDVVSKEKQQLQDEVMKLKGMLKE 148
            + P  ++  FLY    +Y+Q  F  +E    GS E +  +         +KK+RL  EQ++ LE +F+ + KL+P+RK+KL++ELGLQPRQ+A+WFQNRR+RWKTK LE+ Y +LK  FD + + +  LQ +   L G +KE
Sbjct:   26 ISPRPTTTGFLYSGAGDYSQM-FDALE--DDGSLEDLGGVGHASSTA-AEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKE 163
[Close]
BLAST of rna-XM_004497559.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y136|A0A1S2Y136_CICAR (Homeobox-leucine zipper protein OS=Cicer arietinum OX=3827 GN=LOC101490599 PE=3 SV=1)

HSP 1 Score: 495.352 bits (1274), Expect = 3.033e-177
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0 
Query:    1 MEWNCNTTHFLHPPDSSLSFLYNYNQTSFQGMEVKQQGSTETVLEMEKMMKYGNQDKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQFDVVSKEKQQLQDEVMKLKGMLKEQGSSSSCGKTQVSAVDYHYREMSGEETETIESTSEAALFGSNRVREKIHHHLNNAGGNFCFNMENNYNMNNTVPVLPYWPAVPYNYRS 236
            MEWNCNTTHFLHPPDSSLSFLYNYNQTSFQGMEVKQQGSTETVLEMEKMMKYGNQDKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQFDVVSKEKQQLQDEVMKLKGMLKEQGSSSSCGKTQVSAVDYHYREMSGEETETIESTSEAALFGSNRVREKIHHHLNNAGGNFCFNMENNYNMNNTVPVLPYWPAVPYNYRS
Sbjct:    1 MEWNCNTTHFLHPPDSSLSFLYNYNQTSFQGMEVKQQGSTETVLEMEKMMKYGNQDKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQFDVVSKEKQQLQDEVMKLKGMLKEQGSSSSCGKTQVSAVDYHYREMSGEETETIESTSEAALFGSNRVREKIHHHLNNAGGNFCFNMENNYNMNNTVPVLPYWPAVPYNYRS 236
[Close]
BLAST of rna-XM_004497559.3 vs. UniProtKB/TrEMBL
Match: tr|G7I9C4|G7I9C4_MEDTR (Homeobox-leucine zipper protein OS=Medicago truncatula OX=3880 GN=11420785 PE=3 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 6.848e-111
Identity = 175/238 (73.53%), Postives = 197/238 (82.77%), Query Frame = 0 
Query:    1 MEWNCNTTHFLHPPDSSLSFLYNYNQTSFQGM-EVKQQGSTETVL-EMEKMMKYGNQDKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQFDVVSKEKQQLQDEVMKLKGMLKEQGSSSSCGKTQVSAVDYHYREMSGEETETIESTSEAALFGSNR-VREKIHHHLNNAGGNFCFNMENNYNMNNTVPVLPYWP-AVPYNY 234
            MEWN NT  F+  P+SSLSFLYNYNQ S+QGM EVK Q  T+T+  EMEKMMKYGNQ+KKKRLTSEQ+E+LESSFQ+EIKLDPQRKMKLSKELGLQPRQIA+WFQNRR+RWKTK LE LYD L+HQF+VVSKEKQQLQDEVMKLK MLKEQG  +SCG+ Q      +Y EMS EETET+ESTSEAAL  SNR V+ KIH  LN   GN  FN+E +YN+NN VP+LPYWP AVPYNY
Sbjct:    1 MEWNGNTRSFVPQPESSLSFLYNYNQCSYQGMMEVKHQDWTDTMFPEMEKMMKYGNQEKKKRLTSEQMESLESSFQEEIKLDPQRKMKLSKELGLQPRQIAIWFQNRRARWKTKQLEHLYDSLRHQFEVVSKEKQQLQDEVMKLKAMLKEQG--NSCGRMQG-----YYTEMSVEETETVESTSEAALRCSNREVKGKIHQQLNIDEGNCSFNLE-DYNINNNVPLLPYWPAAVPYNY 230
[Close]
BLAST of rna-XM_004497559.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3MQC8|A0A2K3MQC8_TRIPR (Homeobox-leucine zipper protein OS=Trifolium pratense OX=57577 GN=L195_g016161 PE=3 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 6.286e-106
Identity = 170/239 (71.13%), Postives = 192/239 (80.33%), Query Frame = 0 
Query:    1 MEWNCNTTHFLHPPDSSLSFLYNYNQTSFQGM-EVKQQGSTETVL-EMEKMMKYGNQDKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQFDVVSKEKQQLQDEVMKLKGMLKEQGSSSSCGKTQVSAVDYHYREMSGEETETIESTSEAALFGSNR-VREKIHHHLNNAGGNFCFNMENNYNMNNTVPVLPYWPAVP-YNYR 235
            MEWN N   F+  P+SSLSFLYNYNQT +QGM EVKQQ  TET+  EMEKMMKYGNQ+KKKRLT+EQ+E+LESSFQ+EIKLDPQRKMKLSKELGLQPRQIAVWFQNRR+RWKTK LE LYD LKHQF+VVSKEKQQLQDEVMKLK MLKEQG               +Y E+SGEETET+ESTSEAAL  SNR V+ K H+  N A GN CFN+  +YN NN+VP+LPYWP VP +NY+
Sbjct:    1 MEWNGNQRSFVPQPESSLSFLYNYNQTPYQGMVEVKQQEWTETMFPEMEKMMKYGNQEKKKRLTNEQMESLESSFQEEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRARWKTKQLEHLYDSLKHQFNVVSKEKQQLQDEVMKLKAMLKEQGC--------------YYSEISGEETETVESTSEAALLCSNREVKGKDHNQFNIAEGN-CFNL-GDYNFNNSVPLLPYWPNVPHHNYQ 223
[Close]
BLAST of rna-XM_004497559.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4W6T4|A0A9D4W6T4_PEA (Homeobox-leucine zipper protein (Fragment) OS=Pisum sativum OX=3888 GN=KIW84_062116 PE=3 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 4.452e-96
Identity = 159/237 (67.09%), Postives = 182/237 (76.79%), Query Frame = 0 
Query:    1 MEWNCNTTHFL-HPPDSSLSFLYNYNQTSFQGMEVKQQGSTETVLEMEKMMKYGNQDKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQFDVVSKEKQQLQDEVMKLKGMLKEQGSSSSCGKTQVSAVDYHYREMSGEETETIESTSEAALFGSNRVREKIHHHLNNAGGNFCFNMENNYNMNNT--VPVLPYWPAVPYNY 234
            M+WN NT  FL    DSSL+FL NYNQTS+QGMEVKQ+  TET  EM++M    NQ+KKKRLTSEQ+E+LESSFQ EIKLDP RKMKLSKELGLQPRQIA+WFQNRR+RWKTK LE LYD LKHQF+VVSKEKQQLQDEVMKLKGMLKEQG  S  G+ Q       Y E+S EETET+ESTSE         + KIHH  N   GN CFN+E +YN++N+  VP+LPYWP+V YNY
Sbjct:    7 MDWNGNTASFLPQHADSSLNFLSNYNQTSYQGMEVKQREWTETFPEMDRMTM--NQEKKKRLTSEQMESLESSFQMEIKLDPHRKMKLSKELGLQPRQIAIWFQNRRARWKTKQLEHLYDSLKHQFEVVSKEKQQLQDEVMKLKGMLKEQGCCS--GRVQGC-----YTEVSVEETETVESTSER--------KGKIHHEFNIGEGNCCFNLE-DYNIHNSTVVPLLPYWPSVSYNY 225
[Close]
BLAST of rna-XM_004497559.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6MFK5|A0A2Z6MFK5_TRISU (Homeobox-leucine zipper protein OS=Trifolium subterraneum OX=3900 GN=TSUD_392920 PE=3 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 2.223e-94
Identity = 150/205 (73.17%), Postives = 168/205 (81.95%), Query Frame = 0 
Query:   32 MEVKQQGSTETVLEMEKMMKYGNQDKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQFDVVSKEKQQLQDEVMKLKGMLKEQGSSSSCGKTQVSAVDYHYREMSGEETETIESTSEAALFGSN-RVREKIHHHLNNAGGNFCFNMENNYNMNNTVPVLPYWPAVPYNYR 235
            +EVKQQ  TET  EMEKMM Y NQ+KKKRLTSEQ+E+LESSFQ+EIKLDPQRKMKLSKELGLQPRQIAVWFQNRR+RWKTK LE LYD LKHQF+VVSKEKQQLQDEVMKLK MLKEQG SS       S +  +Y EMSGEETET+ESTSEAAL  SN  ++ K H+  N A GN CFN+E  YN NN+VP+LPYWP VP+NY+
Sbjct:    2 VEVKQQEWTETFPEMEKMMNYKNQEKKKRLTSEQMESLESSFQEEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRARWKTKQLEHLYDSLKHQFNVVSKEKQQLQDEVMKLKAMLKEQGCSS-------SRMQCYYSEMSGEETETVESTSEAALLCSNMEIKGKNHNQFNIAEGN-CFNLE-GYNFNNSVPLLPYWPNVPHNYQ 197
[Close]
BLAST of rna-XM_004497559.3 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8M8Y3|A0A8B8M8Y3_ABRPR (Homeobox-leucine zipper protein OS=Abrus precatorius OX=3816 GN=LOC113872024 PE=3 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 1.527e-87
Identity = 145/232 (62.50%), Postives = 170/232 (73.28%), Query Frame = 0 
Query:    1 MEWNCNTTHFLHPPDSSLSFLYNYNQTSFQGMEVKQQGSTETVLEMEKMMKYGNQDKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQFDVVSKEKQQLQDEVMKLKGMLKEQGSSSSCGKTQVSAVDYHYREMSGEETETIESTSEAALFGSNRVREKIHHHLNNAGGNFCFNMENNYNMNNTVPVLPYWPAVPY 232
            MEWN +T  ++  P+SSLSFLYNY+ T + GMEVKQQ   ET   MEKM   GNQ+KKKRLTS+QL++LESSFQKEIKLDP RKMKLSKELGLQPRQIA+WFQNRR+RWKTK LE LYD LK +FDV+ KEKQ+L++EVMKLK ML++Q S     +TQVS     Y E+SGE  ET+ESTSEA        R  +HHH N   GN  F +E   + NNTVPVLPYWP   Y
Sbjct:    1 MEWNGSTRRYVPRPESSLSFLYNYSYTPYPGMEVKQQALAETPPSMEKM-NCGNQEKKKRLTSDQLDSLESSFQKEIKLDPDRKMKLSKELGLQPRQIAIWFQNRRARWKTKQLESLYDTLKQEFDVIFKEKQKLEEEVMKLKAMLRDQAS-----RTQVST---GYTEISGE--ETVESTSEALRCSK---RGTLHHHQNIGEGNCSFILE---DYNNTVPVLPYWPGATY 215
[Close]
BLAST of rna-XM_004497559.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3ST76|A0A0S3ST76_PHAAN (Homeobox-leucine zipper protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G288000 PE=3 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.313e-85
Identity = 147/236 (62.29%), Postives = 171/236 (72.46%), Query Frame = 0 
Query:    1 MEWNCNTTHFLHPPDSSLSFLYNYNQTSFQGMEVKQQGSTETVLEMEKMMKYGNQDKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQFDVVSKEKQQLQDEVMKLKGMLKEQGSSSSCGKTQVSAVDYHYREMSGEETETIESTSEAALFGSNRV----REKIHHHLNNAGGNFCFNMENNYNMNNTVPVLPYWPAVPY 232
            MEWN +T  ++  PDSS  FLYNYN T + G+EVKQQ   E+   MEKM   GNQDKKKRLT++QL++LESSFQKEIKLDP RKMKLSKELGLQPRQIAVWFQNRR+RWK K LE LYD LK +FDV+SKEKQ+L++EVMKLKGML+EQ S     +TQVS     Y E+SGE  ET+ESTSEA      R     ++  HHH N   GN  F +E+     NTVPVLPYWP VPY
Sbjct:    1 MEWNGSTRRYVPRPDSSFGFLYNYNYTPYPGIEVKQQSIAESSSSMEKM-NCGNQDKKKRLTTDQLDSLESSFQKEIKLDPDRKMKLSKELGLQPRQIAVWFQNRRARWKNKQLEHLYDSLKQEFDVISKEKQKLEEEVMKLKGMLREQAS-----RTQVST---GYTEISGE--ETVESTSEALRCSKRRTLQQQQQHHHHHQNIGEGNCSFTLED----YNTVPVLPYWPGVPY 221
[Close]
BLAST of rna-XM_004497559.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3V4W6|A0A1S3V4W6_VIGRR (Homeobox-leucine zipper protein OS=Vigna radiata var. radiata OX=3916 GN=LOC106771749 PE=3 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.313e-85
Identity = 147/236 (62.29%), Postives = 172/236 (72.88%), Query Frame = 0 
Query:    1 MEWNCNTTHFLHPPDSSLSFLYNYNQTSFQGMEVKQQGSTETVLEMEKMMKYGNQDKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQFDVVSKEKQQLQDEVMKLKGMLKEQGSSSSCGKTQVSAVDYHYREMSGEETETIESTSEAALFGSNRV----REKIHHHLNNAGGNFCFNMENNYNMNNTVPVLPYWPAVPY 232
            MEWN +T  ++  PDSS  FLYNYN T + G+EVKQQ   E+   MEKM   GNQDKKKRLT++QL++LESSFQKEIKLDP RKMKLSKELGLQPRQIAVWFQNRR+RWK K LE LYD LK +FDV+SKEKQ+L++EVMKLKGML+EQ S     +TQVS     Y E+SGE  ET+ESTSEA      R     +++ HHH N   GN  F +E+     NTVPVLPYWP VPY
Sbjct:    1 MEWNGSTRRYVPRPDSSFGFLYNYNYTPYPGIEVKQQSIAESSSSMEKM-NCGNQDKKKRLTTDQLDSLESSFQKEIKLDPDRKMKLSKELGLQPRQIAVWFQNRRARWKNKQLEHLYDSLKQEFDVISKEKQKLEEEVMKLKGMLREQAS-----RTQVST---GYTEISGE--ETVESTSEALRCSKRRTLQQQQQQHHHHQNIGEGNCSFTLED----YNTVPVLPYWPGVPY 221
[Close]
BLAST of rna-XM_004497559.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445HGH1|A0A445HGH1_GLYSO (Homeobox-leucine zipper protein OS=Glycine soja OX=3848 GN=D0Y65_036740 PE=3 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 4.409e-85
Identity = 148/235 (62.98%), Postives = 170/235 (72.34%), Query Frame = 0 
Query:    1 MEWNCNTTHFLHPPDSSLSFLYNYNQTSFQGMEVKQQGSTETVLEMEKMMKYGNQDKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQFDVVSKEKQQLQDEVMKLKGMLKEQGSSSSCGKTQVSAVDYHYREMSGEETETIESTSEAALFGSNRVREKIHH--HLNNAG-GNFCFNMENNYNMNNTVPVLPYWPAVPY 232
            MEWN +T  ++   DSSLSFLYNYN T + GMEVKQQ   ET   MEKM   GNQ+KKKRLTS+QL++LE+SFQKEIKLDP RKMKLSKELGLQPRQIAVWFQNRR+RWK K LE LYD LK +FDV+SKEKQ+L++EVMKLK ML+EQ S +     QVS     Y E+SGE  ET+ESTSEA        R  +HH    NN G GN  F +E+     NTVPVLPYWP VPY
Sbjct:    1 MEWNGSTRRYVPRADSSLSFLYNYNYTPYPGMEVKQQALAETSSPMEKM-NCGNQEKKKRLTSDQLDSLENSFQKEIKLDPDRKMKLSKELGLQPRQIAVWFQNRRARWKNKQLEHLYDSLKQEFDVISKEKQKLEEEVMKLKTMLREQASRTQ----QVST---GYTEISGE--ETVESTSEALRCSK---RGTLHHQQQQNNIGEGNCSFTLED----YNTVPVLPYWPGVPY 218
[Close]
BLAST of rna-XM_004497559.3 vs. UniProtKB/TrEMBL
Match: tr|I1LZD7|I1LZD7_SOYBN (Homeobox-leucine zipper protein OS=Glycine max OX=3847 GN=100778007 PE=3 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 4.409e-85
Identity = 148/235 (62.98%), Postives = 170/235 (72.34%), Query Frame = 0 
Query:    1 MEWNCNTTHFLHPPDSSLSFLYNYNQTSFQGMEVKQQGSTETVLEMEKMMKYGNQDKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAVWFQNRRSRWKTKNLEQLYDLLKHQFDVVSKEKQQLQDEVMKLKGMLKEQGSSSSCGKTQVSAVDYHYREMSGEETETIESTSEAALFGSNRVREKIHH--HLNNAG-GNFCFNMENNYNMNNTVPVLPYWPAVPY 232
            MEWN +T  ++   DSSLSFLYNYN T + GMEVKQQ   ET   MEKM   GNQ+KKKRLTS+QL++LE+SFQKEIKLDP RKMKLSKELGLQPRQIAVWFQNRR+RWK K LE LYD LK +FDV+SKEKQ+L++EVMKLK ML+EQ S +     QVS     Y E+SGE  ET+ESTSEA        R  +HH    NN G GN  F +E+     NTVPVLPYWP VPY
Sbjct:    1 MEWNGSTRRYVPRADSSLSFLYNYNYTPYPGMEVKQQALAETSSPMEKM-NCGNQEKKKRLTSDQLDSLENSFQKEIKLDPDRKMKLSKELGLQPRQIAVWFQNRRARWKNKQLEHLYDSLKQEFDVISKEKQKLEEEVMKLKTMLREQASRTQ----QVST---GYTEISGE--ETVESTSEALRCSK---RGTLHHQQQQNNIGEGNCSFTLED----YNTVPVLPYWPGVPY 218
The following BLAST results are available for this feature:
BLAST of rna-XM_004497559.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
|1.184e-4842.91Symbols: ATHB51, LMI1, HB51 | homeobox 51, LATE ME... [more]
|7.231e-4251.23Symbols: ATHB51, LMI1, HB51 | homeobox 51, LATE ME... [more]
|1.049e-3859.48Symbols: HB22, ATHB22 | homeobox protein 22, ARABI... [more]
|1.389e-2856.84Symbols: ATHB13 | | chr1:26259166-26260465 FORWAR... [more]
|9.324e-2842.25Symbols: HB5, ATHB-5, ATHB5 | homeobox protein 5 |... [more]
|1.148e-2742.25Symbols: HB5, ATHB-5, ATHB5 | homeobox protein 5 |... [more]
|3.977e-2742.07Symbols: HB-7, ATHB7, ATHB-7 | ARABIDOPSIS THALIAN... [more]
|5.357e-2758.24Symbols: ATHB3, ATHB-3, HB-3, HAT7 | homeobox 3, H... [more]
|7.463e-2742.18Symbols: HB-7, ATHB7, ATHB-7 | ARABIDOPSIS THALIAN... [more]
|1.738e-2666.20Symbols: AT3G01472.1, HD-ZIP-1, CPuORF33, HAT5, AT... [more]
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BLAST of rna-XM_004497559.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q9LZR0|ATB51_ARATH1.135e-4742.91Putative homeobox-leucine zipper protein ATHB-51 O... [more]
sp|Q4PSR7|ATB22_ARATH1.005e-3759.48Homeobox-leucine zipper protein ATHB-22 OS=Arabido... [more]
sp|Q6K498|HOX4_ORYSJ7.658e-3040.69Homeobox-leucine zipper protein HOX4 OS=Oryza sati... [more]
sp|Q9XH37|HOX4_ORYSI7.658e-3040.69Homeobox-leucine zipper protein HOX4 OS=Oryza sati... [more]
sp|Q6Z248|HOX20_ORYSJ7.267e-2849.06Homeobox-leucine zipper protein HOX20 OS=Oryza sat... [more]
sp|A2YWC0|HOX20_ORYSI7.267e-2849.06Homeobox-leucine zipper protein HOX20 OS=Oryza sat... [more]
sp|Q8LC03|ATB13_ARATH1.344e-2756.84Homeobox-leucine zipper protein ATHB-13 OS=Arabido... [more]
sp|Q8S7W9|HOX21_ORYSJ6.001e-2754.17Homeobox-leucine zipper protein HOX21 OS=Oryza sat... [more]
sp|A2XD08|HOX21_ORYSI7.735e-2754.17Homeobox-leucine zipper protein HOX21 OS=Oryza sat... [more]
sp|P46667|ATHB5_ARATH9.036e-2742.25Homeobox-leucine zipper protein ATHB-5 OS=Arabidop... [more]
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BLAST of rna-XM_004497559.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2Y136|A0A1S2Y136_CICAR3.033e-177100.00Homeobox-leucine zipper protein OS=Cicer arietinum... [more]
tr|G7I9C4|G7I9C4_MEDTR6.848e-11173.53Homeobox-leucine zipper protein OS=Medicago trunca... [more]
tr|A0A2K3MQC8|A0A2K3MQC8_TRIPR6.286e-10671.13Homeobox-leucine zipper protein OS=Trifolium prate... [more]
tr|A0A9D4W6T4|A0A9D4W6T4_PEA4.452e-9667.09Homeobox-leucine zipper protein (Fragment) OS=Pisu... [more]
tr|A0A2Z6MFK5|A0A2Z6MFK5_TRISU2.223e-9473.17Homeobox-leucine zipper protein OS=Trifolium subte... [more]
tr|A0A8B8M8Y3|A0A8B8M8Y3_ABRPR1.527e-8762.50Homeobox-leucine zipper protein OS=Abrus precatori... [more]
tr|A0A0S3ST76|A0A0S3ST76_PHAAN1.313e-8562.29Homeobox-leucine zipper protein OS=Vigna angularis... [more]
tr|A0A1S3V4W6|A0A1S3V4W6_VIGRR1.313e-8562.29Homeobox-leucine zipper protein OS=Vigna radiata v... [more]
tr|A0A445HGH1|A0A445HGH1_GLYSO4.409e-8562.98Homeobox-leucine zipper protein OS=Glycine soja OX... [more]
tr|I1LZD7|I1LZD7_SOYBN4.409e-8562.98Homeobox-leucine zipper protein OS=Glycine max OX=... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000047Helix-turn-helix motifPRINTSPR00031HTHREPRESSRcoord: 83..92
score: 37.96
coord: 92..108
score: 54.77
NoneNo IPR availableGENE3D1.10.10.60coord: 50..119
e-value: 1.4E-20
score: 74.5
IPR003106Leucine zipper, homeobox-associatedPFAMPF02183HALZcoord: 112..146
e-value: 0.005
score: 28.3
IPR001356Homeobox domainPFAMPF00046Homeodomaincoord: 57..110
e-value: 3.8E-14
score: 63.6
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 52..112
score: 17.264614
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 57..113
e-value: 3.64081E-16
score: 68.424
IPR045224Homeobox-leucine zipper protein, class I, plantPANTHERPTHR24326HOMEOBOX-LEUCINE ZIPPER PROTEINcoord: 47..174
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 49..114

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_004497559.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004497559.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004497559.3; organism=Cicer arietinum; type=mRNA; length=711bp
ATGGAGTGGAATTGCAACACAACACACTTTCTTCATCCACCAGACTCTTC
CTTAAGCTTCCTCTACAACTACAACCAAACCTCATTTCAAGGAATGGAAG
TGAAACAACAGGGGTCGACAGAGACAGTTCTAGAAATGGAAAAAATGATG
AAGTACGGAAACCAAGACAAGAAAAAGCGATTAACGAGTGAACAATTGGA
AACATTGGAGAGTAGTTTCCAAAAGGAGATAAAATTAGATCCTCAAAGGA
AGATGAAGCTTTCAAAAGAGTTAGGATTGCAGCCTCGCCAAATTGCTGTT
TGGTTCCAAAATAGGAGGTCAAGATGGAAGACCAAGAACCTTGAACAATT
GTATGATTTACTTAAACACCAATTTGATGTCGTCTCTAAAGAAAAACAGC
AGCTTCAAGATGAGGTAATGAAGTTGAAGGGTATGCTGAAAGAGCAAGGT
TCTTCATCTTCTTGTGGTAAAACGCAAGTATCAGCAGTAGATTATCATTA
TAGAGAAATGTCTGGAGAAGAAACAGAGACAATAGAAAGCACATCAGAGG
CAGCTCTATTTGGCTCCAACAGGGTGAGGGAAAAGATTCATCATCACTTG
AACAATGCAGGGGGAAACTTTTGTTTCAATATGGAGAATAATTATAACAT
GAATAACACTGTTCCAGTTTTACCCTACTGGCCTGCTGTTCCTTATAACT
ATCGGTCCTAA
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protein sequence of rna-XM_004497559.3_CaCDCfrontier-NCBI_v1

>rna-XM_004497559.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004497559.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004497559.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=236bp
MEWNCNTTHFLHPPDSSLSFLYNYNQTSFQGMEVKQQGSTETVLEMEKMM
KYGNQDKKKRLTSEQLETLESSFQKEIKLDPQRKMKLSKELGLQPRQIAV
WFQNRRSRWKTKNLEQLYDLLKHQFDVVSKEKQQLQDEVMKLKGMLKEQG
SSSSCGKTQVSAVDYHYREMSGEETETIESTSEAALFGSNRVREKIHHHL
NNAGGNFCFNMENNYNMNNTVPVLPYWPAVPYNYRS
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mRNA from alignment at chr4:21829582..21831695-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_004497559.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004497559.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004497559.3; organism=Cicer arietinum; type=mRNA; length=2114bp; location=Sequence derived from: chr4:21829582..21831695- (Cicer arietinum
CATGCATGCTACATGTACTATTGACCTCTCACTATCCTGTCACAACTTCC
TTTGTGGTCCATCTCCATCCCATTACCAAACACAGATAAGTTATATACTT
AAATGCCATACTAGCAACTTCAGTTGAAGGGGTGAAAGAAATAGATAGAT
ATTATGGAGTGGAATTGCAACACAACACACTTTCTTCATCCACCAGACTC
TTCCTTAAGCTTCCTCTACAACTACAACCAAACCTCATTTCAAGGTACAA
TCATAAGAACAAGATCTTCAAAACACTATAGCTAGTTACTCTTCTAAAGC
ATAATAACATTGCACGTTCTAAGCATCTAACTTCTAGCATGTAATTTTCA
GTGTCCACACAACTTTAAGCCATTTTATGTCCCCACCCATATATAATATT
GCTTTTTCTATATAGCTTACTCACTATATTCATTCAAAATCTACGAAGCA
CTCTCGTAATTGAAAATCCTTTCAATACAACACGATACTGATTATGATTT
TAAATTGTGGTCGCAGTCAAATTACACCTACTTTTATTTTTTTTGTATTG
TGGTTCTTACAATACGTTTTGTAAACATTGTAGTGTGAATTTATTTTTAA
TTAACATCAAATACTATATAGTTTATCAGTGATATTAAAATTCAAATATC
TTCTTTCTTTTCTTTAAAATGTATCTTTACAAGGAAGATAATAGAAAGCA
ATTTTTGTGAGTACTATTGCAGTCATATTCCTAATGCAAACACGTGTAAC
TACATAAAATGGCATTTATTTTCTCAAATTATAATGAGTGTGAGTGATAG
TTGAAAATACATATATAGTGTCCATTAGAGTGTTGAGGTGGTAATTAAAT
AAAAGATGATGTGTTTTTGTTAAGGAATGGAAGTGAAACAACAGGGGTCG
ACAGAGACAGTTCTAGAAATGGAAAAAATGATGAAGTACGGAAACCAAGA
CAAGAAAAAGCGATTAACGAGTGAACAATTGGAAACATTGGAGAGTAGTT
TCCAAAAGGAGATAAAATTAGATCCTCAAAGGAAGATGAAGCTTTCAAAA
GAGTTAGGATTGCAGCCTCGCCAAATTGCTGTTTGGTTCCAAAATAGGAG
GTCAAGATGGAAGACCAAGAACCTTGAACAATTGTATGATTTACTTAAAC
ACCAATTTGATGTCGTCTCTAAAGAAAAACAGCAGCTTCAAGATGAGGTA
GGTTAATATTCCATTCTCATTTTCTTCTTTTTGTAATCCAAATGTGTATT
TAAAGTTGACATTTTATTTTGTTTTGCTTAAATTGATTTAGTGCATCTTA
TAATTATATTGTTTAAACATCTTATTATGTTATAAAAGAGAGATAGAAAT
CTTTTGGGATAGCTTACTATAAAACAACTTAATACTCGTTAAAAAACTGT
TTTTTCAGTTAATTTACATAAGCTTTCAAAGATAGTTTAGAAAAGTAATT
TATAATTTATATAAAAGTAATTTAACTTTATTTTATCTTGTTGCAGATAT
AATTTATACATAAACACTTCAGTGTTTGTAGCTTAATATACATTTCTGTC
ACTTCATCCCTCAATTATATTAAACAAAAATAAGTAGTAGTTATTAATAT
TTTGTCTCATCAATTCCACTAAAATAAAAATTGTGTCAAAATATAATGTA
ATAGTATATTATAAAAATTGGTTTGGCTTGTTCAGGTAATGAAGTTGAAG
GGTATGCTGAAAGAGCAAGGTTCTTCATCTTCTTGTGGTAAAACGCAAGT
ATCAGCAGTAGATTATCATTATAGAGAAATGTCTGGAGAAGAAACAGAGA
CAATAGAAAGCACATCAGAGGCAGCTCTATTTGGCTCCAACAGGGTGAGG
GAAAAGATTCATCATCACTTGAACAATGCAGGGGGAAACTTTTGTTTCAA
TATGGAGAATAATTATAACATGAATAACACTGTTCCAGTTTTACCCTACT
GGCCTGCTGTTCCTTATAACTATCGGTCCTAATTATATTATTAACTTAAT
CTGTTTTTAACAACAGCTTTATCTGAGTCAGATTAGTTTCCTTATGTGTT
GTCCATACCTTTTTTCACTTAAAATACAATTATGTGCCTAACTGTAAGTT
TTTTCATAAGTGTA
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Coding sequence (CDS) from alignment at chr4:21829582..21831695-

>rna-XM_004497559.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004497559.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004497559.3; organism=Cicer arietinum; type=CDS; length=711bp; location=Sequence derived from: chr4:21829582..21831695- (Cicer arietinum
ATGGAGTGGAATTGCAACACAACACACTTTCTTCATCCACCAGACTCTTC
CTTAAGCTTCCTCTACAACTACAACCAAACCTCATTTCAAGGAATGGAAG
TGAAACAACAGGGGTCGACAGAGACAGTTCTAGAAATGGAAAAAATGATG
AAGTACGGAAACCAAGACAAGAAAAAGCGATTAACGAGTGAACAATTGGA
AACATTGGAGAGTAGTTTCCAAAAGGAGATAAAATTAGATCCTCAAAGGA
AGATGAAGCTTTCAAAAGAGTTAGGATTGCAGCCTCGCCAAATTGCTGTT
TGGTTCCAAAATAGGAGGTCAAGATGGAAGACCAAGAACCTTGAACAATT
GTATGATTTACTTAAACACCAATTTGATGTCGTCTCTAAAGAAAAACAGC
AGCTTCAAGATGAGGTAATGAAGTTGAAGGGTATGCTGAAAGAGCAAGGT
TCTTCATCTTCTTGTGGTAAAACGCAAGTATCAGCAGTAGATTATCATTA
TAGAGAAATGTCTGGAGAAGAAACAGAGACAATAGAAAGCACATCAGAGG
CAGCTCTATTTGGCTCCAACAGGGTGAGGGAAAAGATTCATCATCACTTG
AACAATGCAGGGGGAAACTTTTGTTTCAATATGGAGAATAATTATAACAT
GAATAACACTGTTCCAGTTTTACCCTACTGGCCTGCTGTTCCTTATAACT
ATCGGTCCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000047HTH_motif
IPR003106Leu_zip_homeo
IPR001356HD
IPR045224HDZip_class_I_plant
IPR009057Homeodomain-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
GO:0003700DNA-binding transcription factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription