Cc_v2.0_19489.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Cc_v2.0_19489.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151T6Q3|A0A151T6Q3_CAJCA (Stigma-specific STIG1-like protein 1 OS=Cajanus cajan OX=3821 GN=KK1_017286 PE=3 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 6.785e-83 Identity = 125/132 (94.70%), Postives = 128/132 (96.97%), Query Frame = 0 Query: 2 MKSFKTLFLVAMLMALATTLSATSSETEEPKSVRGRSRFLSQNGRVALTCDKNPKICLIKGSAGPDCC-TKKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVYGMCSYA 132
MKSF T FL+AMLMALA TLSAT+SETEEPKS+RGRSRFLSQNGRVALTCDKNPKICLIKGSAGPDCC TKKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVYGMCSYA
Sbjct: 1 MKSFTTFFLLAMLMALAITLSATTSETEEPKSLRGRSRFLSQNGRVALTCDKNPKICLIKGSAGPDCCCTKKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVYGMCSYA 132
BLAST of Cc_v2.0_19489.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151T6R1|A0A151T6R1_CAJCA (Stigma-specific STIG1-like protein 1 OS=Cajanus cajan OX=3821 GN=KK1_017287 PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 2.409e-78 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0 Query: 15 MALATTLSATSSETEEPKSVRGRSRFLSQNGRVALTCDKNPKICLIKGSAGPDCCTKKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVYGMCSYA 132
MALATTLSATSSETEEPKSVRGRSRFLSQNGRVALTCDKNPKICLIKGSAGPDCCTKKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVYGMCSYA
Sbjct: 1 MALATTLSATSSETEEPKSVRGRSRFLSQNGRVALTCDKNPKICLIKGSAGPDCCTKKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVYGMCSYA 118
BLAST of Cc_v2.0_19489.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445GS19|A0A445GS19_GLYSO (Stigma-specific STIG1-like protein 1 OS=Glycine soja OX=3848 GN=D0Y65_040575 PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.318e-76 Identity = 118/132 (89.39%), Postives = 125/132 (94.70%), Query Frame = 0 Query: 2 MKSFKTLFLVAML-MALATTLSATSSETEEPKSVRGRSRFLSQNGRVALTCDKNPKICLIKGSAGPDCCTKKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVYGMCSYA 132
MKS KTLFLVA+L MALA TLSATSS+TEEPKS+RG SRFLSQ RVALTCDKNPKICL+KGSAGP+CC+ KCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCV+GMCSYA
Sbjct: 1 MKSLKTLFLVALLIMALAITLSATSSQTEEPKSLRGTSRFLSQK-RVALTCDKNPKICLVKGSAGPNCCSNKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVFGMCSYA 131
BLAST of Cc_v2.0_19489.1 vs. ExPASy TrEMBL (2024)
Match: tr|C6T234|C6T234_SOYBN (Stigma-specific STIG1-like protein 1 OS=Glycine max OX=3847 GN=100500553 PE=2 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.318e-76 Identity = 118/132 (89.39%), Postives = 125/132 (94.70%), Query Frame = 0 Query: 2 MKSFKTLFLVAML-MALATTLSATSSETEEPKSVRGRSRFLSQNGRVALTCDKNPKICLIKGSAGPDCCTKKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVYGMCSYA 132
MKS KTLFLVA+L MALA TLSATSS+TEEPKS+RG SRFLSQ RVALTCDKNPKICL+KGSAGP+CC+ KCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCV+GMCSYA
Sbjct: 1 MKSLKTLFLVALLIMALAITLSATSSQTEEPKSLRGTSRFLSQK-RVALTCDKNPKICLVKGSAGPNCCSNKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVFGMCSYA 131
BLAST of Cc_v2.0_19489.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445IV04|A0A445IV04_GLYSO (Stigma-specific STIG1-like protein 1 OS=Glycine soja OX=3848 GN=D0Y65_022797 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 1.691e-74 Identity = 117/132 (88.64%), Postives = 123/132 (93.18%), Query Frame = 0 Query: 2 MKSFKTLFLVAMLMALATT-LSATSSETEEPKSVRGRSRFLSQNGRVALTCDKNPKICLIKGSAGPDCCTKKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVYGMCSYA 132
MKS KTLFLVA+LMALA T LSATS ETEEPKS+RG SRFLS+ RVALTCDKNPKICLIKGSAGP+CC+ KCVNFSTDRLNCGRCGKKCSFGKICC+GKCVNPKTNEKHCGKCGNKCNAKGSCV GMCSYA
Sbjct: 1 MKSLKTLFLVALLMALAITQLSATSLETEEPKSLRGTSRFLSKK-RVALTCDKNPKICLIKGSAGPNCCSNKCVNFSTDRLNCGRCGKKCSFGKICCQGKCVNPKTNEKHCGKCGNKCNAKGSCVLGMCSYA 131
BLAST of Cc_v2.0_19489.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1KZV1|I1KZV1_SOYBN (Stigma-specific STIG1-like protein 1 OS=Glycine max OX=3847 GN=100800556 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 1.691e-74 Identity = 117/132 (88.64%), Postives = 123/132 (93.18%), Query Frame = 0 Query: 2 MKSFKTLFLVAMLMALATT-LSATSSETEEPKSVRGRSRFLSQNGRVALTCDKNPKICLIKGSAGPDCCTKKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVYGMCSYA 132
MKS KTLFLVA+LMALA T LSATS ETEEPKS+RG SRFLS+ RVALTCDKNPKICLIKGSAGP+CC+ KCVNFSTDRLNCGRCGKKCSFGKICC+GKCVNPKTNEKHCGKCGNKCNAKGSCV GMCSYA
Sbjct: 1 MKSLKTLFLVALLMALAITQLSATSLETEEPKSLRGTSRFLSKK-RVALTCDKNPKICLIKGSAGPNCCSNKCVNFSTDRLNCGRCGKKCSFGKICCQGKCVNPKTNEKHCGKCGNKCNAKGSCVLGMCSYA 131
BLAST of Cc_v2.0_19489.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86SNA9|A0AA86SNA9_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS19304 PE=4 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 4.303e-73 Identity = 115/133 (86.47%), Postives = 121/133 (90.98%), Query Frame = 0 Query: 2 MKSFKTLFLVAMLMALATT-LSATSSE-TEEPKSVRGRSRFLSQNGRVALTCDKNPKICLIKGSAGPDCCTKKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVYGMCSYA 132
MK KTLFLVA+LMALA T LSATSS+ EEPKS+RG SRFLSQ+GRVALTC+KNPKICL+KGSAGPDCC KCV FSTDRLNCGRCGKKCSFGKICCEGKCVNP TNEKHCGKCGNKCNAKGSCV GMCSYA
Sbjct: 1 MKLLKTLFLVALLMALAITDLSATSSDFDEEPKSLRGTSRFLSQSGRVALTCEKNPKICLVKGSAGPDCCNNKCVKFSTDRLNCGRCGKKCSFGKICCEGKCVNPNTNEKHCGKCGNKCNAKGSCVLGMCSYA 133
BLAST of Cc_v2.0_19489.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6KTN4|A0A4D6KTN4_VIGUN (Stigma-specific protein Stig1 OS=Vigna unguiculata OX=3917 GN=DEO72_LG1g786 PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 6.130e-70 Identity = 105/131 (80.15%), Postives = 114/131 (87.02%), Query Frame = 0 Query: 2 MKSFKTLFLVAMLMALATTLSATSSETEEPKSVRGRSRFLSQNGRVALTCDKNPKICLIKGSAGPDCCTKKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVYGMCSYA 132
MK KTLFLV +MALA T++ +S EE KS+RG SRFLSQNGRVALTC+KNPKICL+KGSAGPDCC KCV F TDR NCGRCGKKCSFGKICCEGKCVNP TN+KHCGKCGNKCNAKGSCV+GMCSYA
Sbjct: 1 MKLLKTLFLVLFIMALAITVATSSEWNEETKSLRGTSRFLSQNGRVALTCEKNPKICLVKGSAGPDCCNNKCVKFLTDRQNCGRCGKKCSFGKICCEGKCVNPNTNKKHCGKCGNKCNAKGSCVFGMCSYA 131
BLAST of Cc_v2.0_19489.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7BP07|V7BP07_PHAVU (Stigma-specific STIG1-like protein 1 OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G147200g PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 4.981e-69 Identity = 112/132 (84.85%), Postives = 119/132 (90.15%), Query Frame = 0 Query: 2 MKSFKTLFLVAMLMALA-TTLSATSSET-EEPKSVRGRSRFLSQNGRVALTCDKNPKICLIKGSAGPDCCTKKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVYGMCSY 131
MK KTLFLVA+LMALA T LSATS+++ EEPKS+RG SRFLSQ RVALTC+KNPKICL KGSAGPDCC KKCV FSTDRLNCGRCGKKCSFGKICCEGKCVNP TNEKHCGKCG KCNAKGSCV+GMCSY
Sbjct: 1 MKLLKTLFLVALLMALAITALSATSADSNEEPKSLRGTSRFLSQ--RVALTCEKNPKICLAKGSAGPDCCNKKCVKFSTDRLNCGRCGKKCSFGKICCEGKCVNPNTNEKHCGKCGIKCNAKGSCVFGMCSY 130
BLAST of Cc_v2.0_19489.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8K7E2|A0A8B8K7E2_ABRPR (Stigma-specific STIG1-like protein 1 OS=Abrus precatorius OX=3816 GN=LOC113853314 PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 1.984e-68 Identity = 105/132 (79.55%), Postives = 114/132 (86.36%), Query Frame = 0 Query: 2 MKSFKTLFLVAMLMALATTLSATSSETEEPKSVRGRSRFLSQN-GRVALTCDKNPKICLIKGSAGPDCCTKKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVYGMCSYA 132
MKS TLF++A+LMALA TLSATSSE EEP +RG SRFLSQ GRVAL CDK P IC IKGSAGP+CC KCVNF TD NCGRCGKKCSFGK+CC+GKCVNP+TNEKHCGKCGNKCNAKGSCVYG+CSYA
Sbjct: 1 MKSLNTLFILALLMALAITLSATSSENEEPNFLRGTSRFLSQKKGRVALACDKYPNICHIKGSAGPNCCNNKCVNFFTDSFNCGRCGKKCSFGKMCCDGKCVNPRTNEKHCGKCGNKCNAKGSCVYGICSYA 132
BLAST of Cc_v2.0_19489.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SZ28|STGL1_ARATH (Stigma-specific STIG1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At4g26880 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.884e-22 Identity = 44/118 (37.29%), Postives = 65/118 (55.08%), Query Frame = 0 Query: 19 TTLSATSSETEEPKSVRGRSRFLSQNGRVALTCDKNPKICLIKGSAGPD----CCTKKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVYGMCSYA 132
T+ A S+ T P + + +N A C++NP+IC G G + CC KC++ S+D NCG C KC F + CC G+CV +++HCG+C + C CVYG+C+YA
Sbjct: 35 TSFDAPSTPTIRPNRLLAQKEVGERNPNAADHCNRNPEICTPYGGGGSNSTMTCCNNKCIDVSSDDNNCGACKNKCKFSQTCCRGQCVYVAYDKRHCGQCNHPCELGEFCVYGLCNYA 152
BLAST of Cc_v2.0_19489.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9C6T5|STGL3_ARATH (Stigma-specific STIG1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At1g50720 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.320e-20 Identity = 48/139 (34.53%), Postives = 77/139 (55.40%), Query Frame = 0 Query: 11 VAMLMALAT---------TLSATSSETEEPKSVRGRSRFLSQNGR------VALTCDKNPKICLIKG--SAGPDCCTKKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVYGMCSYA 132
+A+++ +AT TL T ++T+ + SRFL+QN + A C+K +IC +G ++ CC+ KCV+ + D NCG C +C F + CC G+CV +++HCG+C + C CVYG+C+YA
Sbjct: 16 IAIMVLIATVFVSNNKTETLLQTHTQTQTLITTGRVSRFLAQNAKNGRNLNAADHCNKEEEICKSQGMYNSTMACCSNKCVDLAYDNDNCGACKNQCKFTQTCCRGECVYLAYDKRHCGECNHSCLVGEFCVYGLCNYA 154
BLAST of Cc_v2.0_19489.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FLQ0|STGL2_ARATH (Stigma-specific STIG1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g55110 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.064e-18 Identity = 46/129 (35.66%), Postives = 69/129 (53.49%), Query Frame = 0 Query: 21 LSATSSETEEPKSVRGR-SRFLSQ-----------NGRVALTCDKNPKICL-----IKGSAGPDCCTKKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVYGMCSYA 132
L + P +++ R SRFL++ N A C+K+ +IC +A CC KC++ STD NCG C KC FG+ CC G+CV +++HCG+C ++C+ CVYG+C+YA
Sbjct: 35 LEDPFKDLTPPGTIKIRPSRFLAEKVDKGKEPKARNPNAADHCNKDNEICSSSDYSTGANATMACCNNKCMDLSTDDKNCGLCKNKCKFGQTCCRGQCVYVAYDKRHCGECNHRCDLGEFCVYGLCNYA 163
BLAST of Cc_v2.0_19489.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LNN7|GRI_ARATH (Protein GRIM REAPER OS=Arabidopsis thaliana OX=3702 GN=GRI PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.591e-15 Identity = 37/72 (51.39%), Postives = 41/72 (56.94%), Query Frame = 0 Query: 61 KGSAGPDCCTKKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVYGMCSYA 132
KG++ CC K C N DR NCGRCG KC FG+ CC G C N HCGKC KC + C YG C YA
Sbjct: 97 KGTSLLHCCKKHCRNVLGDRNNCGRCGHKCGFGQRCCGGVCTYVNFNPNHCGKCTRKCASGVKCEYGYCGYA 168
BLAST of Cc_v2.0_19489.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9C6P6|STGL4_ARATH (Stigma-specific STIG1-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=KRS PE=2 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 3.033e-12 Identity = 33/80 (41.25%), Postives = 45/80 (56.25%), Query Frame = 0 Query: 55 PKICLIKG--SAGPDCCTKKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVYGMCSYA 132
P IC G A CC +CV+ +D +C C K C F CC+G CV+ T+ +CG+CGN+C + C +GMC YA
Sbjct: 59 PWICKRSGPSEARMRCCRNQCVDVLSDPNHCRFCFKSCRFALSCCDGDCVDTNTDPSNCGQCGNECESGAPCEFGMCGYA 138
BLAST of Cc_v2.0_19489.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q40579|STIG1_TOBAC (Protein STIG1 OS=Nicotiana tabacum OX=4097 GN=STIG1 PE=1 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 6.430e-11 Identity = 29/65 (44.62%), Postives = 38/65 (58.46%), Query Frame = 0 Query: 68 CCTKKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVYGMCSYA 132
C CV+ ST+R NCG CG C+ G CC G CV+ + + +CGKC N C+ C +G C YA
Sbjct: 82 CFNYSCVDVSTNRFNCGSCGLVCNLGTRCCGGICVDIQKDNGNCGKCSNVCSPGQKCSFGFCDYA 146
BLAST of Cc_v2.0_19489.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q6EEH1|STIG1_SOLLC (Protein STIG1 OS=Solanum lycopersicum OX=4081 GN=STIG1 PE=1 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 4.902e-9 Identity = 27/60 (45.00%), Postives = 36/60 (60.00%), Query Frame = 0 Query: 73 CVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVYGMCSYA 132
CV+ T+R NCG CG C G CC G CV+ K + +CGKC N C+ +C +G+C A
Sbjct: 84 CVDLFTNRFNCGSCGLVCIVGTRCCGGICVDIKKDNGNCGKCNNVCSPGQNCSFGLCVSA 143
BLAST of Cc_v2.0_19489.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:4026195-4026617 REVERSE LENGTH=140) HSP 1 Score: 118.627 bits (296), Expect = 4.193e-35 Identity = 60/140 (42.86%), Postives = 84/140 (60.00%), Query Frame = 0 Query: 2 MKSFK-TLFLVAMLMALATTLSATSSETEEPKSVRGRSRFLSQNGR--------VALTCDKNPKICLIKGSAGPDCCTKKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVYGMCSYA 132
M +FK + F++ ++M LA ++ + T E K ++ + R LTCDK+ K+C +KGS G +CC KKCV+ T++LNCGRCGK C + ++CC G CVNP + +HCG C KC SC YGMCSYA
Sbjct: 1 MNTFKISYFIMVLIMVLAIAITFSEPLTVEAKHQHKYGWGIAASARNKGRKHLGATLTCDKSSKVCRLKGSPGRNCCRKKCVDLRTNKLNCGRCGKSCQYSEVCCNGYCVNPMFDRRHCGGCFKKCKKGRSCAYGMCSYA 140
BLAST of Cc_v2.0_19489.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:13508265-13508723 REVERSE LENGTH=152) HSP 1 Score: 88.5817 bits (218), Expect = 4.026e-23 Identity = 44/118 (37.29%), Postives = 65/118 (55.08%), Query Frame = 0 Query: 19 TTLSATSSETEEPKSVRGRSRFLSQNGRVALTCDKNPKICLIKGSAGPD----CCTKKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVYGMCSYA 132
T+ A S+ T P + + +N A C++NP+IC G G + CC KC++ S+D NCG C KC F + CC G+CV +++HCG+C + C CVYG+C+YA
Sbjct: 35 TSFDAPSTPTIRPNRLLAQKEVGERNPNAADHCNRNPEICTPYGGGGSNSTMTCCNNKCIDVSSDDNNCGACKNKCKFSQTCCRGQCVYVAYDKRHCGQCNHPCELGEFCVYGLCNYA 152
BLAST of Cc_v2.0_19489.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:18789180-18789644 REVERSE LENGTH=154) HSP 1 Score: 84.7297 bits (208), Expect = 1.367e-21 Identity = 48/139 (34.53%), Postives = 77/139 (55.40%), Query Frame = 0 Query: 11 VAMLMALAT---------TLSATSSETEEPKSVRGRSRFLSQNGR------VALTCDKNPKICLIKG--SAGPDCCTKKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVYGMCSYA 132
+A+++ +AT TL T ++T+ + SRFL+QN + A C+K +IC +G ++ CC+ KCV+ + D NCG C +C F + CC G+CV +++HCG+C + C CVYG+C+YA
Sbjct: 16 IAIMVLIATVFVSNNKTETLLQTHTQTQTLITTGRVSRFLAQNAKNGRNLNAADHCNKEEEICKSQGMYNSTMACCSNKCVDLAYDNDNCGACKNQCKFTQTCCRGECVYLAYDKRHCGECNHSCLVGEFCVYGLCNYA 154
BLAST of Cc_v2.0_19489.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:22367870-22368361 FORWARD LENGTH=163) HSP 1 Score: 78.5666 bits (192), Expect = 4.201e-19 Identity = 46/129 (35.66%), Postives = 69/129 (53.49%), Query Frame = 0 Query: 21 LSATSSETEEPKSVRGR-SRFLSQ-----------NGRVALTCDKNPKICL-----IKGSAGPDCCTKKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVYGMCSYA 132
L + P +++ R SRFL++ N A C+K+ +IC +A CC KC++ STD NCG C KC FG+ CC G+CV +++HCG+C ++C+ CVYG+C+YA
Sbjct: 35 LEDPFKDLTPPGTIKIRPSRFLAEKVDKGKEPKARNPNAADHCNKDNEICSSSDYSTGANATMACCNNKCMDLSTDDKNCGLCKNKCKFGQTCCRGQCVYVAYDKRHCGECNHRCDLGEFCVYGLCNYA 163
BLAST of Cc_v2.0_19489.1 vs. Araport11
Match: | (Symbols: GRI | GRIM REAPER | chr1:19794947-19795453 REVERSE LENGTH=168) HSP 1 Score: 71.2478 bits (173), Expect = 2.673e-16 Identity = 37/72 (51.39%), Postives = 41/72 (56.94%), Query Frame = 0 Query: 61 KGSAGPDCCTKKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVYGMCSYA 132
KG++ CC K C N DR NCGRCG KC FG+ CC G C N HCGKC KC + C YG C YA
Sbjct: 97 KGTSLLHCCKKHCRNVLGDRNNCGRCGHKCGFGQRCCGGVCTYVNFNPNHCGKCTRKCASGVKCEYGYCGYA 168
BLAST of Cc_v2.0_19489.1 vs. Araport11
Match: | (Symbols: KRS | KERBEROS | chr1:18763773-18764297 REVERSE LENGTH=174) HSP 1 Score: 63.5438 bits (153), Expect = 3.120e-13 Identity = 33/80 (41.25%), Postives = 45/80 (56.25%), Query Frame = 0 Query: 55 PKICLIKG--SAGPDCCTKKCVNFSTDRLNCGRCGKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVYGMCSYA 132
P IC G A CC +CV+ +D +C C K C F CC+G CV+ T+ +CG+CGN+C + C +GMC YA
Sbjct: 59 PWICKRSGPSEARMRCCRNQCVDVLSDPNHCRFCFKSCRFALSCCDGDCVDTNTDPSNCGQCGNECESGAPCEFGMCGYA 138 The following BLAST results are available for this feature:
BLAST of Cc_v2.0_19489.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Cc_v2.0_19489.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot ) Total hits: 7 Position : 0 Zoom : x 1
BLAST of Cc_v2.0_19489.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11) Total hits: 6 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >drCajCajn.Asha.2.0.Cc_v2.0_19489.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19489.1; Name=Cc_v2.0_19489.1; organism=Cajanus cajan; type=mRNA; length=399bpback to top protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_19489.1 >drCajCajn.Asha.2.0.Cc_v2.0_19489.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19489.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_19489.1; organism=Cajanus cajan; type=polypeptide; length=132bpback to top mRNA from alignment at CcLG08_v2.0:53643094..53643764+ Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>drCajCajn.Asha.2.0.Cc_v2.0_19489.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19489.1; Name=Cc_v2.0_19489.1; organism=Cajanus cajan; type=mRNA; length=671bp; location=Sequence derived from: CcLG08_v2.0:53643094..53643764+ (Cajanus cajanback to top Coding sequence (CDS) from alignment at CcLG08_v2.0:53643094..53643764+ >drCajCajn.Asha.2.0.Cc_v2.0_19489.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19489.1; Name=Cc_v2.0_19489.1; organism=Cajanus cajan; type=CDS; length=399bp; location=Sequence derived from: CcLG08_v2.0:53643094..53643764+ (Cajanus cajanback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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