PvulFLAVERTChr11.618
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of PvulFLAVERTChr11.618 vs. ExPASy TrEMBL (2024)
Match: tr|V7AI36|V7AI36_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G103100g PE=4 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 1.218e-53 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0 Query: 1 MGSKAPSWSDQWGNGGLGSGHYDEEDEKVKKSSGSSKKMSAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 89 MGSKAPSWSDQWGNGGLGSGHYDEEDEKVKKSSGSSKKMSAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK Sbjct: 1 MGSKAPSWSDQWGNGGLGSGHYDEEDEKVKKSSGSSKKMSAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 89
BLAST of PvulFLAVERTChr11.618 vs. ExPASy TrEMBL (2024)
Match: tr|V7AG48|V7AG48_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G103200g PE=4 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.336e-51 Identity = 85/87 (97.70%), Postives = 86/87 (98.85%), Query Frame = 0 Query: 1 MGSKAPSWSDQWGNGGLGSGHYDEEDEKVKKSSGSSKKMSAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRT 87 MGSKAPSWSDQWGNGGLGSGHYDEEDEKVKKSSGSSKKMSAGMDKAKAAAIVG+DKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKR Sbjct: 1 MGSKAPSWSDQWGNGGLGSGHYDEEDEKVKKSSGSSKKMSAGMDKAKAAAIVGSDKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRL 87
BLAST of PvulFLAVERTChr11.618 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86W6G9|A0AA86W6G9_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS31267 PE=4 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 2.165e-48 Identity = 81/89 (91.01%), Postives = 85/89 (95.51%), Query Frame = 0 Query: 1 MGSKAPSWSDQWGNGGLGSGHYDEEDEKVKKSSGSSKKMSAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 89 MGSKAPSWSDQWGNGG GS HYD EDEK+KKSSGS+KKM+AGMDKAKAAAIVGADKAKTAAVVGAQK+K GTSAGIKWVKNQYQKRTSK Sbjct: 1 MGSKAPSWSDQWGNGGFGSEHYDLEDEKMKKSSGSNKKMAAGMDKAKAAAIVGADKAKTAAVVGAQKLKGGTSAGIKWVKNQYQKRTSK 89
BLAST of PvulFLAVERTChr11.618 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SC22|A0A0S3SC22_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G151600 PE=4 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 5.184e-45 Identity = 80/87 (91.95%), Postives = 82/87 (94.25%), Query Frame = 0 Query: 3 SKAPSWSDQWGNGGLGSGHYDEEDEKVKKSSGSSKKMSAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 89 SK PSWSDQWGNGG GS HY EDEKVKKSSGS+KKM+AGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK Sbjct: 2 SKGPSWSDQWGNGGFGSDHY--EDEKVKKSSGSNKKMAAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 86
BLAST of PvulFLAVERTChr11.618 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9V5W0|A0A0L9V5W0_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan08g120500 PE=4 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 5.184e-45 Identity = 80/87 (91.95%), Postives = 82/87 (94.25%), Query Frame = 0 Query: 3 SKAPSWSDQWGNGGLGSGHYDEEDEKVKKSSGSSKKMSAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 89 SK PSWSDQWGNGG GS HY EDEKVKKSSGS+KKM+AGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK Sbjct: 2 SKGPSWSDQWGNGGFGSDHY--EDEKVKKSSGSNKKMAAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 86
BLAST of PvulFLAVERTChr11.618 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6LH74|A0A4D6LH74_VIGUN (CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase OS=Vigna unguiculata OX=3917 GN=DEO72_LG3g2477 PE=4 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 2.416e-40 Identity = 82/87 (94.25%), Postives = 84/87 (96.55%), Query Frame = 0 Query: 3 SKAPSWSDQWGNGGLGSGHYDEEDEKVKKSSGSSKKMSAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 89 SKAPSWSDQWGNGG GS HY+ EDEKVKKSSGSSKKM+AGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK Sbjct: 2 SKAPSWSDQWGNGGFGSDHYEVEDEKVKKSSGSSKKMAAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 88
BLAST of PvulFLAVERTChr11.618 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151S0K2|A0A151S0K2_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_030052 PE=4 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.040e-39 Identity = 74/92 (80.43%), Postives = 80/92 (86.96%), Query Frame = 0 Query: 1 MGSKAPSWSDQWGNGGLGSGHYDEEDEKVKKSSGSSKK---MSAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 89 MGSKAP+WSDQWG+ GS HYDE +EK+KKS GSSK SAG+DKAKAAAIVGADKAKTAAVVGAQKVKSGTSAG+KW KNQYQKRTSK Sbjct: 1 MGSKAPNWSDQWGSEAFGSDHYDE-NEKLKKSGGSSKAKAVASAGVDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGLKWFKNQYQKRTSK 91
BLAST of PvulFLAVERTChr11.618 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3TIL2|A0A1S3TIL2_VIGRR (Uncharacterized protein LOC106755902 OS=Vigna radiata var. radiata OX=3916 GN=LOC106755902 PE=4 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.294e-37 Identity = 81/87 (93.10%), Postives = 82/87 (94.25%), Query Frame = 0 Query: 3 SKAPSWSDQWGNGGLGSGHYDEEDEKVKKSSGSSKKMSAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 89 SK PSWSDQWGNGG GS HY EDEKVKKSSGSSKKM+AGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK Sbjct: 2 SKGPSWSDQWGNGGFGSDHY--EDEKVKKSSGSSKKMAAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 86
BLAST of PvulFLAVERTChr11.618 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2Z6MJR9|A0A2Z6MJR9_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_270860 PE=4 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 5.858e-37 Identity = 73/97 (75.26%), Postives = 79/97 (81.44%), Query Frame = 0 Query: 1 MGSKAPSWSDQWGNGGLGSGHY-DEEDEKVKKSSGSSKKMS-------AGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 89 MGSKAP+WSDQWG GGLGS Y DE K KSSGS KKM+ A MDKAK+AAIVGADKAKTAAVVGAQKVKSGTSAG+KW+KNQYQK+TSK Sbjct: 1 MGSKAPTWSDQWGTGGLGSDEYEDEAVNKNTKSSGSGKKMTDAKLMATASMDKAKSAAIVGADKAKTAAVVGAQKVKSGTSAGLKWIKNQYQKKTSK 97
BLAST of PvulFLAVERTChr11.618 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8KVB2|A0A8B8KVB2_ABRPR (Uncharacterized protein LOC113859189 OS=Abrus precatorius OX=3816 GN=LOC113859189 PE=4 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 2.289e-36 Identity = 82/95 (86.32%), Postives = 84/95 (88.42%), Query Frame = 0 Query: 1 MGSKAPSWSDQWGNGGLGSGHYDEEDEKVKKSSGSSKKM-------SAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTS 88 MGSKAPSWSDQWG GG GS HY EEDEKVKKSSGSSKKM SAGMDKAKAAAIVGADKAK+AAVVGAQKVKSGTSAG+KWVKNQYQKRTS Sbjct: 1 MGSKAPSWSDQWGTGGFGSEHY-EEDEKVKKSSGSSKKMADAKAMASAGMDKAKAAAIVGADKAKSAAVVGAQKVKSGTSAGLKWVKNQYQKRTS 94
BLAST of PvulFLAVERTChr11.618 vs. Araport11
Match: | (Symbols: HUP35, SDA1 | SMALL DEFENSE-ASSOCIATED PROTEIN 1, HYPOXIA RESPONSE UNKNOWN PROTEIN 35 | chr1:6568142-6568402 FORWARD LENGTH=86) HSP 1 Score: 44.669 bits (104), Expect = 2.760e-7 Identity = 34/91 (37.36%), Postives = 47/91 (51.65%), Query Frame = 0 Query: 6 PSWSDQWGNGG-------LGSGHYDEEDEKVKKSSGSSKKMSAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 89 SW+DQW N G +GSG V +SSGS ++ K K G DK K A G +K+K+G++ G +WVK++Y K T K Sbjct: 4 TSWADQWDNSGDSAKGGRIGSG-------AVVRSSGSG--ATSNTTKYKEKMGQGLDKTKAVASSGFKKLKTGSAIGFRWVKDKYHKTTHK 85 The following BLAST results are available for this feature:
BLAST of PvulFLAVERTChr11.618 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of PvulFLAVERTChr11.618 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of PvulFLAVERTChr11.618 vs. Araport11
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs arabidopsis Araport11) Total hits: 1
InterPro
Analysis Name: Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL
Date Performed: 2024-08-19
Analysis Name: InterProScan Analysis for Phaseolus vulgaris cv. Flavert genome v1.0 Date Performed: 2024-08-19
Sequences
The
following sequences are available for this feature:
mRNA sequence >drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.618 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.618; Name=PvulFLAVERTChr11.618; organism=Phaseolus vulgaris; type=mRNA; length=1434bpback to top protein sequence of drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.618 >drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.618 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.618; Name=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.618; organism=Phaseolus vulgaris; type=polypeptide; length=89bpback to top mRNA from alignment at Chr11:11893151..11894663+ Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.618 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.618; Name=PvulFLAVERTChr11.618; organism=Phaseolus vulgaris; type=mRNA; length=1513bp; location=Sequence derived from: Chr11:11893151..11894663+ (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr11:11893151..11894663+ >drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.618 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.618; Name=PvulFLAVERTChr11.618; organism=Phaseolus vulgaris; type=CDS; length=270bp; location=Sequence derived from: Chr11:11893151..11894663+ (Phaseolus vulgarisback to top |