Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
drPhaVulg.Flavert.1.0five_prime_UTR:PvulFLAVERTChr11.618.0 drPhaVulg.Flavert.1.0five_prime_UTR:PvulFLAVERTChr11.618.0 Phaseolus vulgaris five_prime_UTR drPhaVulg.Flavert.1.0five_prime_UTR:PvulFLAVERTChr11.618.2 drPhaVulg.Flavert.1.0five_prime_UTR:PvulFLAVERTChr11.618.2 Phaseolus vulgaris five_prime_UTR
The following exon feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.618.utr0 drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.618.utr0 Phaseolus vulgaris exon drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.618.1 drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.618.1 Phaseolus vulgaris exon
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.618.1 drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.618.1 Phaseolus vulgaris CDS
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
drPhaVulg.Flavert.1.0three_prime_UTR:PvulFLAVERTChr11.618.4 drPhaVulg.Flavert.1.0three_prime_UTR:PvulFLAVERTChr11.618.4 Phaseolus vulgaris three_prime_UTR
The following polypeptide feature(s) derives from this mRNA:
Feature Name Unique Name Species Type
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.618 drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.618 Phaseolus vulgaris polypeptide drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.618 drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.618-protein Phaseolus vulgaris polypeptide
Homology
BLAST of PvulFLAVERTChr11.618 vs. ExPASy TrEMBL (2024)
Match:
tr|V7AI36|V7AI36_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G103100g PE=4 SV=1)
HSP 1 Score: 171.014 bits (432), Expect = 1.218e-53
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
Query: 1 MGSKAPSWSDQWGNGGLGSGHYDEEDEKVKKSSGSSKKMSAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 89
MGSKAPSWSDQWGNGGLGSGHYDEEDEKVKKSSGSSKKMSAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK
Sbjct: 1 MGSKAPSWSDQWGNGGLGSGHYDEEDEKVKKSSGSSKKMSAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 89
BLAST of PvulFLAVERTChr11.618 vs. ExPASy TrEMBL (2024)
Match:
tr|V7AG48|V7AG48_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G103200g PE=4 SV=1)
HSP 1 Score: 165.622 bits (418), Expect = 2.336e-51
Identity = 85/87 (97.70%), Postives = 86/87 (98.85%), Query Frame = 0
Query: 1 MGSKAPSWSDQWGNGGLGSGHYDEEDEKVKKSSGSSKKMSAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRT 87
MGSKAPSWSDQWGNGGLGSGHYDEEDEKVKKSSGSSKKMSAGMDKAKAAAIVG+DKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKR
Sbjct: 1 MGSKAPSWSDQWGNGGLGSGHYDEEDEKVKKSSGSSKKMSAGMDKAKAAAIVGSDKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRL 87
BLAST of PvulFLAVERTChr11.618 vs. ExPASy TrEMBL (2024)
Match:
tr|A0AA86W6G9|A0AA86W6G9_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS31267 PE=4 SV=1)
HSP 1 Score: 157.918 bits (398), Expect = 2.165e-48
Identity = 81/89 (91.01%), Postives = 85/89 (95.51%), Query Frame = 0
Query: 1 MGSKAPSWSDQWGNGGLGSGHYDEEDEKVKKSSGSSKKMSAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 89
MGSKAPSWSDQWGNGG GS HYD EDEK+KKSSGS+KKM+AGMDKAKAAAIVGADKAKTAAVVGAQK+K GTSAGIKWVKNQYQKRTSK
Sbjct: 1 MGSKAPSWSDQWGNGGFGSEHYDLEDEKMKKSSGSNKKMAAGMDKAKAAAIVGADKAKTAAVVGAQKLKGGTSAGIKWVKNQYQKRTSK 89
BLAST of PvulFLAVERTChr11.618 vs. ExPASy TrEMBL (2024)
Match:
tr|A0A0S3SC22|A0A0S3SC22_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G151600 PE=4 SV=1)
HSP 1 Score: 149.443 bits (376), Expect = 5.184e-45
Identity = 80/87 (91.95%), Postives = 82/87 (94.25%), Query Frame = 0
Query: 3 SKAPSWSDQWGNGGLGSGHYDEEDEKVKKSSGSSKKMSAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 89
SK PSWSDQWGNGG GS HY EDEKVKKSSGS+KKM+AGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK
Sbjct: 2 SKGPSWSDQWGNGGFGSDHY--EDEKVKKSSGSNKKMAAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 86
BLAST of PvulFLAVERTChr11.618 vs. ExPASy TrEMBL (2024)
Match:
tr|A0A0L9V5W0|A0A0L9V5W0_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan08g120500 PE=4 SV=1)
HSP 1 Score: 149.443 bits (376), Expect = 5.184e-45
Identity = 80/87 (91.95%), Postives = 82/87 (94.25%), Query Frame = 0
Query: 3 SKAPSWSDQWGNGGLGSGHYDEEDEKVKKSSGSSKKMSAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 89
SK PSWSDQWGNGG GS HY EDEKVKKSSGS+KKM+AGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK
Sbjct: 2 SKGPSWSDQWGNGGFGSDHY--EDEKVKKSSGSNKKMAAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 86
BLAST of PvulFLAVERTChr11.618 vs. ExPASy TrEMBL (2024)
Match:
tr|A0A4D6LH74|A0A4D6LH74_VIGUN (CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase OS=Vigna unguiculata OX=3917 GN=DEO72_LG3g2477 PE=4 SV=1)
HSP 1 Score: 137.502 bits (345), Expect = 2.416e-40
Identity = 82/87 (94.25%), Postives = 84/87 (96.55%), Query Frame = 0
Query: 3 SKAPSWSDQWGNGGLGSGHYDEEDEKVKKSSGSSKKMSAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 89
SKAPSWSDQWGNGG GS HY+ EDEKVKKSSGSSKKM+AGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK
Sbjct: 2 SKAPSWSDQWGNGGFGSDHYEVEDEKVKKSSGSSKKMAAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 88
BLAST of PvulFLAVERTChr11.618 vs. ExPASy TrEMBL (2024)
Match:
tr|A0A151S0K2|A0A151S0K2_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_030052 PE=4 SV=1)
HSP 1 Score: 133.65 bits (335), Expect = 9.040e-39
Identity = 74/92 (80.43%), Postives = 80/92 (86.96%), Query Frame = 0
Query: 1 MGSKAPSWSDQWGNGGLGSGHYDEEDEKVKKSSGSSKK---MSAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 89
MGSKAP+WSDQWG+ GS HYDE +EK+KKS GSSK SAG+DKAKAAAIVGADKAKTAAVVGAQKVKSGTSAG+KW KNQYQKRTSK
Sbjct: 1 MGSKAPNWSDQWGSEAFGSDHYDE-NEKLKKSGGSSKAKAVASAGVDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGLKWFKNQYQKRTSK 91
BLAST of PvulFLAVERTChr11.618 vs. ExPASy TrEMBL (2024)
Match:
tr|A0A1S3TIL2|A0A1S3TIL2_VIGRR (Uncharacterized protein LOC106755902 OS=Vigna radiata var. radiata OX=3916 GN=LOC106755902 PE=4 SV=1)
HSP 1 Score: 130.568 bits (327), Expect = 1.294e-37
Identity = 81/87 (93.10%), Postives = 82/87 (94.25%), Query Frame = 0
Query: 3 SKAPSWSDQWGNGGLGSGHYDEEDEKVKKSSGSSKKMSAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 89
SK PSWSDQWGNGG GS HY EDEKVKKSSGSSKKM+AGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK
Sbjct: 2 SKGPSWSDQWGNGGFGSDHY--EDEKVKKSSGSSKKMAAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 86
BLAST of PvulFLAVERTChr11.618 vs. ExPASy TrEMBL (2024)
Match:
tr|A0A2Z6MJR9|A0A2Z6MJR9_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_270860 PE=4 SV=1)
HSP 1 Score: 129.413 bits (324), Expect = 5.858e-37
Identity = 73/97 (75.26%), Postives = 79/97 (81.44%), Query Frame = 0
Query: 1 MGSKAPSWSDQWGNGGLGSGHY-DEEDEKVKKSSGSSKKMS-------AGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 89
MGSKAP+WSDQWG GGLGS Y DE K KSSGS KKM+ A MDKAK+AAIVGADKAKTAAVVGAQKVKSGTSAG+KW+KNQYQK+TSK
Sbjct: 1 MGSKAPTWSDQWGTGGLGSDEYEDEAVNKNTKSSGSGKKMTDAKLMATASMDKAKSAAIVGADKAKTAAVVGAQKVKSGTSAGLKWIKNQYQKKTSK 97
BLAST of PvulFLAVERTChr11.618 vs. ExPASy TrEMBL (2024)
Match:
tr|A0A8B8KVB2|A0A8B8KVB2_ABRPR (Uncharacterized protein LOC113859189 OS=Abrus precatorius OX=3816 GN=LOC113859189 PE=4 SV=1)
HSP 1 Score: 127.872 bits (320), Expect = 2.289e-36
Identity = 82/95 (86.32%), Postives = 84/95 (88.42%), Query Frame = 0
Query: 1 MGSKAPSWSDQWGNGGLGSGHYDEEDEKVKKSSGSSKKM-------SAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTS 88
MGSKAPSWSDQWG GG GS HY EEDEKVKKSSGSSKKM SAGMDKAKAAAIVGADKAK+AAVVGAQKVKSGTSAG+KWVKNQYQKRTS
Sbjct: 1 MGSKAPSWSDQWGTGGFGSEHY-EEDEKVKKSSGSSKKMADAKAMASAGMDKAKAAAIVGADKAKSAAVVGAQKVKSGTSAGLKWVKNQYQKRTS 94
BLAST of PvulFLAVERTChr11.618 vs. Araport11
Match:
| (Symbols: HUP35, SDA1 | SMALL DEFENSE-ASSOCIATED PROTEIN 1, HYPOXIA RESPONSE UNKNOWN PROTEIN 35 | chr1:6568142-6568402 FORWARD LENGTH=86)
HSP 1 Score: 44.669 bits (104), Expect = 2.760e-7
Identity = 34/91 (37.36%), Postives = 47/91 (51.65%), Query Frame = 0
Query: 6 PSWSDQWGNGG-------LGSGHYDEEDEKVKKSSGSSKKMSAGMDKAKAAAIVGADKAKTAAVVGAQKVKSGTSAGIKWVKNQYQKRTSK 89
SW+DQW N G +GSG V +SSGS ++ K K G DK K A G +K+K+G++ G +WVK++Y K T K
Sbjct: 4 TSWADQWDNSGDSAKGGRIGSG-------AVVRSSGSG--ATSNTTKYKEKMGQGLDKTKAVASSGFKKLKTGSAIGFRWVKDKYHKTTHK 85
The following BLAST results are available for this feature:
BLAST of PvulFLAVERTChr11.618 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (
Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL )
Total hits: 10
200 400 600 800 1000 1200 1400 Expect = 1.22e-53 / Id = 100.00 Expect = 2.34e-51 / Id = 97.70 Expect = 2.16e-48 / Id = 91.01 Expect = 5.18e-45 / Id = 91.95 Expect = 5.18e-45 / Id = 91.95 Expect = 2.42e-40 / Id = 94.25 Expect = 9.04e-39 / Id = 80.43 Expect = 1.29e-37 / Id = 93.10 Expect = 5.86e-37 / Id = 75.26 Expect = 2.29e-36 / Id = 86.32 Sequence tr|V7AI36|V7AI36_PHAVU tr|V7AG48|V7AG48_PHAVU tr|A0AA86W6G9|A0AA86W6G9_9FABA tr|A0A0S3SC22|A0A0S3SC22_PHAAN tr|A0A0L9V5W0|A0A0L9V5W0_PHAAN tr|A0A4D6LH74|A0A4D6LH74_VIGUN tr|A0A151S0K2|A0A151S0K2_CAJCA tr|A0A1S3TIL2|A0A1S3TIL2_VIGRR tr|A0A2Z6MJR9|A0A2Z6MJR9_TRISU tr|A0A8B8KVB2|A0A8B8KVB2_ABRPR 200 400 600 800 1000 1200 1400 Score = Sequence PTHR33386 back to top
Sequences
The
following sequences are available for this feature:
mRNA sequence
>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.618 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.618; Name=PvulFLAVERTChr11.618; organism=Phaseolus vulgaris; type=mRNA; length=1434bp back to top protein sequence of drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.618
>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.618 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.618; Name=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.618; organism=Phaseolus vulgaris; type=polypeptide; length=89bp back to top mRNA from alignment at Chr11:11893151..11894663+
Legend: five_prime_UTR exon CDS polypeptide three_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.618 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.618; Name=PvulFLAVERTChr11.618; organism=Phaseolus vulgaris; type=mRNA; length=1513bp; location=Sequence derived from: Chr11:11893151..11894663+ (Phaseolus vulgarisATCTCTGTATCATTTATCTGTCTCTCCATGTGTACATGGAAAAAAAACCT
TGTTTAACCTTAATTTGTTCATACATAAATTTCTTGAAAATTGTTTGTAC
CCAGTAAACAAGTTGTTGGgtgttttcttgttttttattcataacgattt
atgtaatatttgttGGACATCAGAATGAATTTGGGTTGATAAATTCTTCA
ATCTTGTGCTTGGAATTTCTGGAGAGATCTTGTGTGAAAGGAAGGTTTTG
TTGTACCCATGGTTTGATTCTTCTCACCAATTCATGACCcccaatttttt
tcttttatcgcGGTTAAAGGTTGAATAATCGCTTTGATTATCTGTCACCA
TCCGCAAACGCGTGGACTTAGCATTAATTTGACTGCGTGAGACTTGGATT
AAGATGCAATTTTGTTTTTGCCCCTTTTGATTTTTCATATTCTTCTCCTA
GTTCCCTTATCCAATTCAGTCTCTGGAGTGATTGTTGATTAGAATCAGAG
TGTTTTTGGGTGAGTATTgtcaattaattttgtaaattgttTCTAGCTAG
AATTGGTTCTGAAGGGAAGCTATTTATGTTTGTGCATTCGTATAAAAATC
ATGAATGAAACGGTAATCAAATTGATTCTAGAACACTGGGTCGAGTGTTT
ATGCATTAGTATAAAAAGTTATGAATGAAACGGTAATCTAAGTTCAGTTT
GAATTTTGTGGATAACAGAAACATAGTTAAGAGAGAAACTTTATCAGGta
acttttaaaatttccaaacggaaattatttatcattgagattgataaata
ttatgtattaatatcatataaattGATTCTAGACTCAAGTTAGCTGGATT
TATTTCAACCAATCAATTCTAGACCAGAATCAATTGTTCTATGTGATGAC
AAACATGTAAATATTTACTTAAAATCTGATGGCAAGTATCAG GCTAAAAGATA ATGGGCAGCAAGGCACCA
AGTTGGTCTGACCAATGGGGAAATGGAGGGCTTGGTAGTGGCCACTATGA
TGAGGAGGATGAGAAGGTGAAGAAGAGCAGTGGAAGCAGCAAGAAGATGT
CTGCTGGGATGGACAAGGCCAAAGCTGCAGCAATTGTGGGTGCTGACAAG
GCTAAAACTGCTGCTGTAGTGGGTGCCCAGAAGGTGAAGAGTGGAACCTC
TGCTGGAATCAAATGGGTCAAGAATCAGTACCAGAAAAGGACTTCCAAGT
GA AGTCTCACTCACAGGCCACTTGCTTCTTGGACAGTTTCAGTTCATAGC
TTTGGTAAATAATATACATGATGCTTCAGTCAAATATTTTGCTTGTTTGT
GTGCAATTTACAGTACAACAGTCCAGAttaacttgtttttatttttcatt
tgtttgtAGAAAATTGTTGGATGTTGATCATGTTATTAGTTTACCTGGAA
TCTTTCTTCCTGT back to top Coding sequence (CDS) from alignment at Chr11:11893151..11894663+
>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.618 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.618; Name=PvulFLAVERTChr11.618; organism=Phaseolus vulgaris; type=CDS; length=270bp; location=Sequence derived from: Chr11:11893151..11894663+ (Phaseolus vulgaris back to top
