Ca_00968, Ca_00968_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_00968
Unique NameCa_00968_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length726
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca3chromosomeCa3:36512886..36516351 -Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR198Pisum sativum Cameor genome v1aPisum sativum
capsR205Pisum sativum Cameor genome v1aPisum sativum
capsR216Pisum sativum Cameor genome v1aPisum sativum
capsR229Pisum sativum Cameor genome v1aPisum sativum
capsR235Pisum sativum Cameor genome v1aPisum sativum
cavuR164Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR181Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR211Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR193Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR245Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR279Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0284Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0294Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0308Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0342Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0434Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0622Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0816Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0823Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL030Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL371Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL379Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL484Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR173Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR198Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR210Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR207Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR216Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR222Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR207Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR216Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR223Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR193Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR232Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR247Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR260Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR267Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR155Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR200Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR220Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR081Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR088Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR089Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR111Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL134Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL250Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL344Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL354Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL457Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL536Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR184Cicer arietinum
cacarR209Cicer arietinum
cacarR210Cicer arietinum
cacarR230Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Psat3g021800.1Pisum sativum Cameor genome v1aPisum sativum
jg31444.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.5g163040.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.5g130200.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat03G0097500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_012714111.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_00968-CDS1Ca_00968-CDS1Cicer arietinumCDS
Ca_00968-CDS2Ca_00968-CDS2Cicer arietinumCDS
Ca_00968-CDS3Ca_00968-CDS3Cicer arietinumCDS
Ca_00968-CDS4Ca_00968-CDS4Cicer arietinumCDS
Ca_00968-CDS5Ca_00968-CDS5Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_00968_v1.0_kabuliCa_00968_v1.0_kabuliCicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_00968 vs. SwissProt
Match: RU1A_ARATH (U1 small nuclear ribonucleoprotein A OS=Arabidopsis thaliana GN=U1A PE=1 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 1.109e-75
Identity = 147/240 (61.25%), Postives = 167/240 (69.58%), Query Frame = 1 
Query:   22 SETPQNMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXX---ANLAGMGLNPSYPGAYGATPA---IPYPGGAKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            SE   N TIY                 +AVFSQFGKILE+LAFKT KHKGQAWV+F++  SAS A+ +M  FPFYDK MRIQYA+TKSD++AKADGTFVP                      +   GM +N +YPG YGA P    +PYPGG K  +PEAPAPPNNILF+QNLP+ETTPM+LQMLF QY GFKEVRM+E KPGIAFVE+ DEMQSTVAMQ LQGFKI  QN MLITYAKK
Sbjct:   12 SEVSPNQTIYINNLNEKVKLDELKKSLNAVFSQFGKILEILAFKTFKHKGQAWVVFDNTESASTAIAKMNNFPFYDKEMRIQYAKTKSDVVAKADGTFVPREKRKRHEEKGGGKKKKDQHHDSTQMGMPMNSAYPGVYGAAPPLSQVPYPGGMKPNMPEAPAPPNNILFVQNLPHETTPMVLQMLFCQYQGFKEVRMIEAKPGIAFVEFADEMQSTVAMQGLQGFKI-QQNQMLITYAKK 250
[Close]
BLAST of Ca_00968 vs. SwissProt
Match: RU1A_ORYSJ (U1 small nuclear ribonucleoprotein A OS=Oryza sativa subsp. japonica GN=Os05g0154800 PE=2 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 2.556e-72
Identity = 146/236 (61.86%), Postives = 166/236 (70.34%), Query Frame = 1 
Query:   31 PQNMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXX---ANLAGMGLNPSYPGAYGATPA--IPYPGGAKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            P N+TIY                  AVFSQFGKIL+VLAFKTLKHKGQAWV+FEDV+SA+ AL+ MQ FPF++KPMRIQYA+TKSDIIAKADGTFVP                       +  G+G+N +YPG YGA P   +P+ G  K M+PE   P NNILF+QNLP+ETTPMMLQMLF QYPGFKEVRMVE KPGIAFVEYGDE Q+T AM  LQGFKIT  N MLI+YAKK
Sbjct:   20 PPNVTIYINNLNEKIKLEELKKSLRAVFSQFGKILDVLAFKTLKHKGQAWVVFEDVASATEALKSMQDFPFHNKPMRIQYAKTKSDIIAKADGTFVPRERRKRNDEKPEKKQKREQHHDVSQVGLGVN-AYPGVYGAPPLSQLPFAGAQKVMMPEIIVP-NNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAKPGIAFVEYGDEGQATAAMNHLQGFKITKDNQMLISYAKK 253
[Close]
BLAST of Ca_00968 vs. SwissProt
Match: RU1A_ORYSI (U1 small nuclear ribonucleoprotein A OS=Oryza sativa subsp. indica GN=OsI_18512 PE=2 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 2.556e-72
Identity = 146/236 (61.86%), Postives = 166/236 (70.34%), Query Frame = 1 
Query:   31 PQNMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXX---ANLAGMGLNPSYPGAYGATPA--IPYPGGAKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            P N+TIY                  AVFSQFGKIL+VLAFKTLKHKGQAWV+FEDV+SA+ AL+ MQ FPF++KPMRIQYA+TKSDIIAKADGTFVP                       +  G+G+N +YPG YGA P   +P+ G  K M+PE   P NNILF+QNLP+ETTPMMLQMLF QYPGFKEVRMVE KPGIAFVEYGDE Q+T AM  LQGFKIT  N MLI+YAKK
Sbjct:   20 PPNVTIYINNLNEKIKLEELKKSLRAVFSQFGKILDVLAFKTLKHKGQAWVVFEDVASATEALKSMQDFPFHNKPMRIQYAKTKSDIIAKADGTFVPRERRKRNDEKPEKKQKREQHHDVSQVGLGVN-AYPGVYGAPPLSQLPFAGAQKVMMPEIIVP-NNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAKPGIAFVEYGDEGQATAAMNHLQGFKITKDNQMLISYAKK 253
[Close]
BLAST of Ca_00968 vs. SwissProt
Match: RU2B1_ARATH (U2 small nuclear ribonucleoprotein B'' OS=Arabidopsis thaliana GN=U2B'' PE=1 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.008e-60
Identity = 120/235 (51.06%), Postives = 156/235 (66.38%), Query Frame = 1 
Query:   22 SETPQNMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXXANLAGMGLNPSYPGAYGATPAIPY-PGGAKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            ++ P N +IY                 + +FSQFG+IL+V+A KT K +GQAWV F +V++A +A+RQMQ FPFYDKPMR+QYA+ KSD +AKA+GTFVP                         G + + P A    PA  + P G ++M      PPNNILFIQNLP+ETT MMLQ+LF QYPGFKE+RM++ KPGIAFVEY D++Q+++AMQ LQGFKITPQNPM+I++AKK
Sbjct:    4 ADIPPNQSIYIQNLNERIKKEELKRSLYCLFSQFGRILDVVALKTPKLRGQAWVTFSEVTAAGHAVRQMQNFPFYDKPMRLQYAKAKSDCLAKAEGTFVPKDKKRKQEEKVERKREDSQRPNTANGPSANGPSANNGVPAPSFQPSGQETM------PPNNILFIQNLPHETTSMMLQLLFEQYPGFKEIRMIDAKPGIAFVEYEDDVQASIAMQPLQGFKITPQNPMVISFAKK 232
[Close]
BLAST of Ca_00968 vs. SwissProt
Match: RU2B2_ARATH (U2 small nuclear ribonucleoprotein B'' 2 OS=Arabidopsis thaliana GN=At1g06960 PE=1 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.482e-59
Identity = 119/235 (50.64%), Postives = 153/235 (65.11%), Query Frame = 1 
Query:   22 SETPQNMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXXANLAGMGLNPSYPGAYGATPAIPY-PGGAKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            ++ P N +IY                 + +FSQFG++L+V+A KT K +GQAWV+F +V++ASNA+RQMQ FPFYDKPMRIQYA++KSD + KA+G+FVP                        M   P+        P  P+ P G  +M      PPNNILFI NLP ET  MMLQ+LF QYPGFKE+RM+E KPGIAFVEY D++QS++AMQALQGFKITPQNPM++++AKK
Sbjct:    4 ADIPPNQSIYIKHINEKIKKEELKRSLYCLFSQFGRLLDVVALKTPKLRGQAWVVFTEVTAASNAVRQMQNFPFYDKPMRIQYAKSKSDYVTKAEGSFVPKEKKMKQEEKVERKRHAEETQQPSM---PNGATTQNGMPVPPFQPSGQDTM------PPNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAKPGIAFVEYEDDVQSSMAMQALQGFKITPQNPMVVSFAKK 229
[Close]
BLAST of Ca_00968 vs. SwissProt
Match: RU2B_ORYSI (U2 small nuclear ribonucleoprotein B'' OS=Oryza sativa subsp. indica GN=OsI_11177 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.657e-53
Identity = 114/234 (48.72%), Postives = 140/234 (59.83%), Query Frame = 1 
Query:   25 ETPQNMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXXANLAGMGLNPSYPGAYGATPAIPYPGGAKSMVP-EAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            + P N T+Y                 +A+ SQ+G+IL+V+A KT K +GQAWV+F ++++A+NA R +Q F FY K MR+QYA+TKSD +A  DG+  P                             S P A   +    Y          E PAPPNNILFIQNLP ETT MMLQ+LF QYPGF+EVRM+E KPGIAFVEY D+ QS VAMQALQGFKITP NPM I+YAKK
Sbjct:    5 DIPPNQTVYLRNLNEKVKKEELKRSLYALCSQYGRILDVVALKTPKLRGQAWVVFSEITAATNAFRGLQEFDFYGKRMRVQYAKTKSDCLATEDGSTAPKEKRKKQEEKAAEKKRRAEE------AQQSGPNAAAQSNGTGYQASRLGKTSQEPPAPPNNILFIQNLPAETTSMMLQILFQQYPGFREVRMIEAKPGIAFVEYEDDSQSMVAMQALQGFKITPYNPMAISYAKK 232
[Close]
BLAST of Ca_00968 vs. SwissProt
Match: RU2B_ORYSJ (U2 small nuclear ribonucleoprotein B'' OS=Oryza sativa subsp. japonica GN=Os03g0298800 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.920e-53
Identity = 113/234 (48.29%), Postives = 140/234 (59.83%), Query Frame = 1 
Query:   25 ETPQNMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXXANLAGMGLNPSYPGAYGATPAIPYPGGAKSMVP-EAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            + P N T+Y                 +A+ SQ+G+IL+V+A KT K +GQAWV+F ++++A+NA R +Q F FY K MR+QYA+T+SD +A  DG+  P                             S P A   +    Y          E PAPPNNILFIQNLP ETT MMLQ+LF QYPGF+EVRM+E KPGIAFVEY D+ QS VAMQALQGFKITP NPM I+YAKK
Sbjct:    5 DIPPNQTVYLRNLNEKVKKEELKRSLYALCSQYGRILDVVALKTPKLRGQAWVVFSEITAATNAFRGLQEFDFYGKRMRVQYAKTRSDCLATEDGSTAPKEKRKKQEEKAAEKKRRAEE------AQQSGPNAAAQSNGTGYQASRLGKTSQEPPAPPNNILFIQNLPAETTSMMLQILFQQYPGFREVRMIEAKPGIAFVEYEDDSQSMVAMQALQGFKITPYNPMAISYAKK 232
[Close]
BLAST of Ca_00968 vs. SwissProt
Match: SNRPA_HUMAN (U1 small nuclear ribonucleoprotein A OS=Homo sapiens GN=SNRPA PE=1 SV=3)

HSP 1 Score: 194.126 bits (492), Expect = 6.774e-49
Identity = 120/281 (42.70%), Postives = 147/281 (52.31%), Query Frame = 1 
Query:   16 AVSETPQNMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXXANLAGMGLNPSYPGAYGATPA--------------------------IPYPGGAKSMVPEA-------------PA------PPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            AV ET  N TIY                 +A+FSQFG+IL++L  ++LK +GQA+VIF++VSSA+NALR MQGFPFYDKPMRIQYA+T SDIIAK  GTFV                      + G G  P      G  P                           IP PG A   +P               PA      PPN+ILF+ NLP ET  +ML MLF Q+PGFKEVR+V  +  IAFVE+ +E+Q+  A  ALQGFKIT  N M I++AKK
Sbjct:    2 AVPETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRKREKRKPKSQETPATKKAVQGGGATPVVGAVQGPVPGMPPMTQAPRIMHHMPGQPPYMPPPGMIPPPGLAPGQIPPGAMPPQQLMPGQMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGAARDALQGFKITQNNAMKISFAKK 282
[Close]
BLAST of Ca_00968 vs. SwissProt
Match: SNRPA_PIG (U1 small nuclear ribonucleoprotein A OS=Sus scrofa GN=SNRPA PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.734e-48
Identity = 119/281 (42.35%), Postives = 146/281 (51.96%), Query Frame = 1 
Query:   16 AVSETPQNMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXXANLAGMGLNPSYPGAYGATPA--------------------------IPYPGGAKSMVPEA-------------PA------PPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            AV ET  N TIY                 +A+FSQFG+IL++L  ++LK +GQA+VIF++VSSA+NALR MQGFPFYDKPMRIQYA+T SDIIAK  GTFV                      + G    P      G  P                           IP PG A   +P               PA      PPN+ILF+ NLP ET  +ML MLF Q+PGFKEVR+V  +  IAFVE+ +E+Q+  A  ALQGFKIT  N M I++AKK
Sbjct:    2 AVPETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRKREKRKPKSQETPASKKAVQGGAAAPVVGAVQGPVPGMPPMTQTPRIMHHMPGQPPYMPPPGMIPPPGLAPGQIPPGAMPPQQLMPGQMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGAARDALQGFKITQNNAMKISFAKK 282
[Close]
BLAST of Ca_00968 vs. SwissProt
Match: SNRPA_BOVIN (U1 small nuclear ribonucleoprotein A OS=Bos taurus GN=SNRPA PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.668e-47
Identity = 119/281 (42.35%), Postives = 146/281 (51.96%), Query Frame = 1 
Query:   16 AVSETPQNMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXXANLAGMGLNPSYPGAYGATPA--------------------------IPYPGGAKSMVPEA-------------PA------PPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            AV ET  N TIY                 +A+FSQFG+IL++L  ++LK +GQA+VIF++VSSA+NALR MQGFPFYDKPMRIQYA+T SDIIAK  GTFV                      + G    P      G  P                           IP PG A   +P               PA      PPN+ILF+ NLP ET  +ML MLF Q+PGFKEVR+V  +  IAFVE+ +E+Q+  A  ALQGFKIT  N M I++AKK
Sbjct:    2 AVPETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRKREKRKPKSQETPAAKKAVQGGAAAPVVGTVQGPVPGMPPMTQAPRIMHHMPGQPPYMPPPGMIPPPGLAPGQLPPGAMPPQQLMPGQMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGAARDALQGFKITQNNAMKISFAKK 282
[Close]
BLAST of Ca_00968 vs. TrEMBL
Match: I1NCF8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 369.777 bits (948), Expect = 4.134e-100
Identity = 187/241 (77.59%), Postives = 195/241 (80.91%), Query Frame = 1 
Query:    1 MSETNAVSETPQNMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXXANLAGMGLNPSYPGAYGATPAIPYPGGAKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            MSE NA  E PQN TIY                 +AVF+QFGKILEVLAFKTLKHKGQAWV+FED SSASNALRQMQGFPFYDKPMRIQYA+TKSDIIAKADGTFVP                   +NLAGMGLNP+Y GAYGA PAI YPGGAKSMVPEAPAPPNNILFIQNLPN++TPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQ LQGFKITPQNPMLITYAKK
Sbjct:    1 MSEVNATPEIPQNNTIYINNLNEKIKIDELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDASSASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPREKRKRHDEKAKKRKDQHDSNLAGMGLNPAYAGAYGAAPAIAYPGGAKSMVPEAPAPPNNILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQTLQGFKITPQNPMLITYAKK 241
[Close]
BLAST of Ca_00968 vs. TrEMBL
Match: I1JRV0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 7.052e-100
Identity = 187/241 (77.59%), Postives = 195/241 (80.91%), Query Frame = 1 
Query:    1 MSETNAVSETPQNMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXXANLAGMGLNPSYPGAYGATPAIPYPGGAKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            MSE NA  E PQ+ TIY                 +AVF+QFGKILEVLAFKTLKHKGQAWV+FED SSASNALRQMQGFPFYDKPMRIQYA+TKSDIIAKADGTFVP                   ANLAGMGLNP+Y GAYGA PAI YPGGAKSMVPEAPAPPNNILFIQNLPN++TPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQ LQGFKITPQNPMLITYAKK
Sbjct:    1 MSEVNATPEIPQSNTIYINNLNEKIKIDELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDASSASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPREKRKRHDDKAKKRKDQHDANLAGMGLNPAYAGAYGAAPAIAYPGGAKSMVPEAPAPPNNILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQTLQGFKITPQNPMLITYAKK 241
[Close]
BLAST of Ca_00968 vs. TrEMBL
Match: C6TMN2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 367.851 bits (943), Expect = 1.571e-99
Identity = 186/241 (77.18%), Postives = 194/241 (80.50%), Query Frame = 1 
Query:    1 MSETNAVSETPQNMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXXANLAGMGLNPSYPGAYGATPAIPYPGGAKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            MSE NA  E PQN  IY                 +AVF+QFGKILEVLAFKTLKHKGQAWV+FED SSASNALRQMQGFPFYDKPMRIQYA+TKSDIIAKADGTFVP                   +NLAGMGLNP+Y GAYGA PAI YPGGAKSMVPEAPAPPNNILFIQNLPN++TPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQ LQGFKITPQNPMLITYAKK
Sbjct:    1 MSEVNATPEIPQNNAIYINNLNEKIKIDELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDASSASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPREKRKRHDEKAKKRKDQHDSNLAGMGLNPAYAGAYGAAPAIAYPGGAKSMVPEAPAPPNNILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQTLQGFKITPQNPMLITYAKK 241
[Close]
BLAST of Ca_00968 vs. TrEMBL
Match: C6SZ90_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 365.54 bits (937), Expect = 7.797e-99
Identity = 186/241 (77.18%), Postives = 194/241 (80.50%), Query Frame = 1 
Query:    1 MSETNAVSETPQNMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXXANLAGMGLNPSYPGAYGATPAIPYPGGAKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            MSE NA  E PQ+ TIY                 +AVF+QFGKILEVLAFKTLKHKGQAWV+FED SSASNALRQMQGFPFYDKPMRIQYA+TKSDIIAKADGTFVP                   ANLAGMGLNP+Y GAYGA PAI YPGGAKSMVPEAPAPPNNILFIQNLPN++TPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQ LQ FKITPQNPMLITYAKK
Sbjct:    1 MSEVNATPEIPQSNTIYINNLNEKIKIDELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDASSASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPREKRKRHDDKAKKRKDQHDANLAGMGLNPAYAGAYGAAPAIAYPGGAKSMVPEAPAPPNNILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQTLQCFKITPQNPMLITYAKK 241
[Close]
BLAST of Ca_00968 vs. TrEMBL
Match: B7FJ52_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 364.77 bits (935), Expect = 1.330e-98
Identity = 189/245 (77.14%), Postives = 197/245 (80.41%), Query Frame = 1 
Query:    1 MSETNAVSETPQNMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXX-ANLAGMGLNPSYPGAYGATPA---IPYPGGAKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            M+E NA  E PQNMTIY                 HAVFSQFGKILEVLAFKTLKHKGQAWVIFEDV+SASNALRQMQGFPFYDKPMRIQYARTKSD+IAKA+GTFVP                    ANLAG GLNP+Y GAYGATPA   IPYPGGAKS++PEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVE KPGIAFVEYGDEMQST+AMQALQGFKI PQNPMLITYAKK
Sbjct:    1 MAEVNANPEPPQNMTIYINNLNEKIKIDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVTSASNALRQMQGFPFYDKPMRIQYARTKSDVIAKAEGTFVPREKRKRHDDKAGKKRKDQNDANLAGTGLNPAYAGAYGATPALSQIPYPGGAKSLLPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVEAKPGIAFVEYGDEMQSTMAMQALQGFKIAPQNPMLITYAKK 245
[Close]
BLAST of Ca_00968 vs. TrEMBL
Match: I1NCF9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 353.599 bits (906), Expect = 3.066e-95
Identity = 175/207 (84.54%), Postives = 183/207 (88.41%), Query Frame = 1 
Query:  103 HAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXXANLAGMGLNPSYPGAYGATPAIPYPGGAKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            +AVF+QFGKILEVLAFKTLKHKGQAWV+FED SSASNALRQMQGFPFYDKPMRIQYA+TKSDIIAKADGTFVP                   +NLAGMGLNP+Y GAYGA PAI YPGGAKSMVPEAPAPPNNILFIQNLPN++TPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQ LQGFKITPQNPMLITYAKK
Sbjct:   12 NAVFTQFGKILEVLAFKTLKHKGQAWVVFEDASSASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPREKRKRHDEKAKKRKDQHDSNLAGMGLNPAYAGAYGAAPAIAYPGGAKSMVPEAPAPPNNILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQTLQGFKITPQNPMLITYAKK 218
[Close]
BLAST of Ca_00968 vs. TrEMBL
Match: I3S8R6_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 349.747 bits (896), Expect = 4.427e-94
Identity = 181/232 (78.02%), Postives = 188/232 (81.03%), Query Frame = 1 
Query:   40 MTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXX-ANLAGMGLNPSYPGAYGATPA---IPYPGGAKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            MTIY                 HAVFSQFGKILEVLAFKTLKHKGQAWVIFEDV+SASNALRQMQGFPFYDKPMRIQYARTKSD+IAKA+GTFVP                    ANLAG GLNP+Y GAYGATPA   IPYPGGAKS++PEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVE KPGIAFVEYGDEMQST+AMQALQGFKI PQNPMLITYAKK
Sbjct:    1 MTIYINNLNEKIKIDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVTSASNALRQMQGFPFYDKPMRIQYARTKSDVIAKAEGTFVPREKRKRHDDKAGKKRKDQNDANLAGTGLNPAYAGAYGATPALSQIPYPGGAKSLLPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVEAKPGIAFVEYGDEMQSTMAMQALQGFKIAPQNPMLITYAKK 232
[Close]
BLAST of Ca_00968 vs. TrEMBL
Match: Q41498_SOLTU (U1snRNP-specific protein, U1A OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 340.117 bits (871), Expect = 3.508e-91
Identity = 170/236 (72.03%), Postives = 187/236 (79.24%), Query Frame = 1 
Query:   25 ETPQNMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXXANLAGMGLNPSYPGAYGATPA---IPYPGGAKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            ETP N+TIY                 HAVFSQFGKILEVLAFKTLKHKGQAWV+FE+VSSASNALRQMQGFPFYDKPMRIQYA+TKSD++AKADGTFVP                   +N AGMGLNP+Y GAYGA P    IPY GGAK+ VPEAPAPPN+ILF+QNLP+++TPMMLQMLF QYPGFKEVRM+E KPGIAF+EYGDEMQSTVAMQALQGFKIT +NPMLITYAKK
Sbjct:   18 ETPPNVTIYINNLNEKIKLEELKKSMHAVFSQFGKILEVLAFKTLKHKGQAWVVFEEVSSASNALRQMQGFPFYDKPMRIQYAKTKSDVVAKADGTFVPREKRKRHEDKGRKKKDQQDSNQAGMGLNPAYAGAYGAAPPFSQIPYMGGAKAAVPEAPAPPNSILFVQNLPHQSTPMMLQMLFCQYPGFKEVRMIEAKPGIAFIEYGDEMQSTVAMQALQGFKITAENPMLITYAKK 253
[Close]
BLAST of Ca_00968 vs. TrEMBL
Match: M1D4N8_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400031814 PE=4 SV=1)

HSP 1 Score: 338.576 bits (867), Expect = 1.021e-90
Identity = 170/236 (72.03%), Postives = 186/236 (78.81%), Query Frame = 1 
Query:   25 ETPQNMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXXANLAGMGLNPSYPGAYGATPA---IPYPGGAKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            E P N+TIY                 HAVFSQFGKILEVLAFKTLKHKGQAWV+FE+VSSASNALRQMQGFPFYDKPMRIQYA+TKSD++AKADGTFVP                   +N AGMGLNP+Y GAYGA P    IPY GGAK+ VPEAPAPPN+ILF+QNLP+++TPMMLQMLF QYPGFKEVRMVE KPGIAF+EYGDEMQSTVAMQALQGFKIT +NPMLITYAKK
Sbjct:   18 EAPPNVTIYINNLNEKIKLEELKKSMHAVFSQFGKILEVLAFKTLKHKGQAWVVFEEVSSASNALRQMQGFPFYDKPMRIQYAKTKSDVVAKADGTFVPREKRKRHEDKGRKKKDQQDSNQAGMGLNPAYAGAYGAAPPFSQIPYMGGAKAAVPEAPAPPNSILFVQNLPHQSTPMMLQMLFCQYPGFKEVRMVEAKPGIAFIEYGDEMQSTVAMQALQGFKITAENPMLITYAKK 253
[Close]
BLAST of Ca_00968 vs. TrEMBL
Match: K4CV97_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc09g075200.2 PE=4 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 8.640e-90
Identity = 169/236 (71.61%), Postives = 184/236 (77.97%), Query Frame = 1 
Query:   25 ETPQNMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXXANLAGMGLNPSYPGAYGATPA---IPYPGGAKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            E P N+TIY                 HAVFSQFGKILEVLAFKTLKHKGQAWV+F++VSSASNALRQMQGFPFYDKPMRIQYA+TKSD++AKADGTFVP                   AN AGMG NP+Y GAYGA P    IPY GGAK+ VPEAPAPPN+ILF+QNLP+++TPMMLQMLF QYPGFKEVRMVE KPGIAF+EYGDEMQSTVAMQALQGFKIT  NPMLITYAKK
Sbjct:   18 EVPPNVTIYINNLNEKIKLEELKKSMHAVFSQFGKILEVLAFKTLKHKGQAWVVFDEVSSASNALRQMQGFPFYDKPMRIQYAKTKSDVVAKADGTFVPREKRKRHEDKGRKKKDQQDANQAGMGRNPAYAGAYGAAPPFSQIPYMGGAKAAVPEAPAPPNSILFVQNLPHQSTPMMLQMLFCQYPGFKEVRMVEAKPGIAFIEYGDEMQSTVAMQALQGFKITADNPMLITYAKK 253
[Close]
BLAST of Ca_00968 vs. DB:Swiss
Match: RU1A_ARATH (U1 small nuclear ribonucleoprotein A OS=Arabidopsis thaliana OX=3702 GN=U1A PE=1 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 2.402e-97
Identity = 171/240 (71.25%), Postives = 199/240 (82.92%), Query Frame = 1 
Query:   22 SETPQNMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXXANLA---GMGLNPSYPGAYGATP---AIPYPGGAKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            SE   N TIYINNLNEK+K++ELKKSL+AVFSQFGKILE+LAFKT KHKGQAWV+F++  SAS A+ +M  FPFYDK MRIQYA+TKSD++AKADGTFVPREKRKRH++KG  +K +   + +   GM +N +YPG YGA P    +PYPGG K  +PEAPAPPNNILF+QNLP+ETTPM+LQMLF QY GFKEVRM+E KPGIAFVE+ DEMQSTVAMQ LQGFKI  QN MLITYAKK
Sbjct:   12 SEVSPNQTIYINNLNEKVKLDELKKSLNAVFSQFGKILEILAFKTFKHKGQAWVVFDNTESASTAIAKMNNFPFYDKEMRIQYAKTKSDVVAKADGTFVPREKRKRHEEKGGGKKKKDQHHDSTQMGMPMNSAYPGVYGAAPPLSQVPYPGGMKPNMPEAPAPPNNILFVQNLPHETTPMVLQMLFCQYQGFKEVRMIEAKPGIAFVEFADEMQSTVAMQGLQGFKIQ-QNQMLITYAKK 250
[Close]
BLAST of Ca_00968 vs. DB:Swiss
Match: RU1A_ORYSJ (U1 small nuclear ribonucleoprotein A OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0154800 PE=3 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 1.060e-94
Identity = 173/236 (73.31%), Postives = 199/236 (84.32%), Query Frame = 1 
Query:   31 PQNMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXX---XXXXXXXXXANLAGMGLNPSYPGAYGATP--AIPYPGGAKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            P N+TIYINNLNEKIK+EELKKSL AVFSQFGKIL+VLAFKTLKHKGQAWV+FEDV+SA+ AL+ MQ FPF++KPMRIQYA+TKSDIIAKADGTFVPRE+RKR+D+K    +KR+  HD +  G+G+N +YPG YGA P   +P+ G  K M+PE   P NNILF+QNLP+ETTPMMLQMLF QYPGFKEVRMVE KPGIAFVEYGDE Q+T AM  LQGFKIT  N MLI+YAKK
Sbjct:   20 PPNVTIYINNLNEKIKLEELKKSLRAVFSQFGKILDVLAFKTLKHKGQAWVVFEDVASATEALKSMQDFPFHNKPMRIQYAKTKSDIIAKADGTFVPRERRKRNDEKPEKKQKREQHHDVSQVGLGVN-AYPGVYGAPPLSQLPFAGAQKVMMPEIIVP-NNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAKPGIAFVEYGDEGQATAAMNHLQGFKITKDNQMLISYAKK 253
[Close]
BLAST of Ca_00968 vs. DB:Swiss
Match: RU1A_ORYSI (U1 small nuclear ribonucleoprotein A OS=Oryza sativa subsp. indica OX=39946 GN=OsI_18512 PE=3 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 1.060e-94
Identity = 173/236 (73.31%), Postives = 199/236 (84.32%), Query Frame = 1 
Query:   31 PQNMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXX---XXXXXXXXXANLAGMGLNPSYPGAYGATP--AIPYPGGAKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            P N+TIYINNLNEKIK+EELKKSL AVFSQFGKIL+VLAFKTLKHKGQAWV+FEDV+SA+ AL+ MQ FPF++KPMRIQYA+TKSDIIAKADGTFVPRE+RKR+D+K    +KR+  HD +  G+G+N +YPG YGA P   +P+ G  K M+PE   P NNILF+QNLP+ETTPMMLQMLF QYPGFKEVRMVE KPGIAFVEYGDE Q+T AM  LQGFKIT  N MLI+YAKK
Sbjct:   20 PPNVTIYINNLNEKIKLEELKKSLRAVFSQFGKILDVLAFKTLKHKGQAWVVFEDVASATEALKSMQDFPFHNKPMRIQYAKTKSDIIAKADGTFVPRERRKRNDEKPEKKQKREQHHDVSQVGLGVN-AYPGVYGAPPLSQLPFAGAQKVMMPEIIVP-NNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAKPGIAFVEYGDEGQATAAMNHLQGFKITKDNQMLISYAKK 253
[Close]
BLAST of Ca_00968 vs. DB:Swiss
Match: RU2B1_ARATH (U2 small nuclear ribonucleoprotein B'' OS=Arabidopsis thaliana OX=3702 GN=U2B'' PE=1 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 3.496e-79
Identity = 135/236 (57.20%), Postives = 185/236 (78.39%), Query Frame = 1 
Query:   19 VSETPQNMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXXANLAGMGLNPSYPGAYGATPAIPY-PGGAKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
             ++ P N +IYI NLNE+IK EELK+SL+ +FSQFG+IL+V+A KT K +GQAWV F +V++A +A+RQMQ FPFYDKPMR+QYA+ KSD +AKA+GTFVP++K+++ ++K +++++         G + + P A    PA  + P G ++M      PPNNILFIQNLP+ETT MMLQ+LF QYPGFKE+RM++ KPGIAFVEY D++Q+++AMQ LQGFKITPQNPM+I++AKK
Sbjct:    3 TADIPPNQSIYIQNLNERIKKEELKRSLYCLFSQFGRILDVVALKTPKLRGQAWVTFSEVTAAGHAVRQMQNFPFYDKPMRLQYAKAKSDCLAKAEGTFVPKDKKRKQEEKVERKREDSQRPNTANGPSANGPSANNGVPAPSFQPSGQETM------PPNNILFIQNLPHETTSMMLQLLFEQYPGFKEIRMIDAKPGIAFVEYEDDVQASIAMQPLQGFKITPQNPMVISFAKK 232
[Close]
BLAST of Ca_00968 vs. DB:Swiss
Match: RU2B2_ARATH (U2 small nuclear ribonucleoprotein B'' 2 OS=Arabidopsis thaliana OX=3702 GN=At1g06960 PE=1 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 1.185e-76
Identity = 134/235 (57.02%), Postives = 181/235 (77.02%), Query Frame = 1 
Query:   22 SETPQNMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXXANLAGMGLNPSYPGAYGATPAIPY-PGGAKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            ++ P N +IYI ++NEKIK EELK+SL+ +FSQFG++L+V+A KT K +GQAWV+F +V++ASNA+RQMQ FPFYDKPMRIQYA++KSD + KA+G+FVP+EK+ + ++K ++++   +     M   P+        P  P+ P G  +M      PPNNILFI NLP ET  MMLQ+LF QYPGFKE+RM+E KPGIAFVEY D++QS++AMQALQGFKITPQNPM++++AKK
Sbjct:    4 ADIPPNQSIYIKHINEKIKKEELKRSLYCLFSQFGRLLDVVALKTPKLRGQAWVVFTEVTAASNAVRQMQNFPFYDKPMRIQYAKSKSDYVTKAEGSFVPKEKKMKQEEKVERKRHAEETQQPSM---PNGATTQNGMPVPPFQPSGQDTM------PPNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAKPGIAFVEYEDDVQSSMAMQALQGFKITPQNPMVVSFAKK 229
[Close]
BLAST of Ca_00968 vs. DB:Swiss
Match: RU2B_ORYSI (U2 small nuclear ribonucleoprotein B'' OS=Oryza sativa subsp. indica OX=39946 GN=OsI_11177 PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 9.239e-70
Identity = 134/236 (56.78%), Postives = 171/236 (72.46%), Query Frame = 1 
Query:   25 ETPQNMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXXANLAGMGLNPSYPGAYGATPAIPYPG---GAKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            + P N T+Y+ NLNEK+K EELK+SL+A+ SQ+G+IL+V+A KT K +GQAWV+F ++++A+NA R +Q F FY K MR+QYA+TKSD +A  DG+  P+EKRK+ ++K  ++K + +          S P A   +    Y     G  S  P  PAPPNNILFIQNLP ETT MMLQ+LF QYPGF+EVRM+E KPGIAFVEY D+ QS VAMQALQGFKITP NPM I+YAKK
Sbjct:    5 DIPPNQTVYLRNLNEKVKKEELKRSLYALCSQYGRILDVVALKTPKLRGQAWVVFSEITAATNAFRGLQEFDFYGKRMRVQYAKTKSDCLATEDGSTAPKEKRKKQEEKAAEKKRRAEE------AQQSGPNAAAQSNGTGYQASRLGKTSQEP--PAPPNNILFIQNLPAETTSMMLQILFQQYPGFREVRMIEAKPGIAFVEYEDDSQSMVAMQALQGFKITPYNPMAISYAKK 232
[Close]
BLAST of Ca_00968 vs. DB:Swiss
Match: RU2B_ORYSJ (U2 small nuclear ribonucleoprotein B'' OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0298800 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.776e-69
Identity = 133/236 (56.36%), Postives = 171/236 (72.46%), Query Frame = 1 
Query:   25 ETPQNMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXXANLAGMGLNPSYPGAYGATPAIPYPG---GAKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            + P N T+Y+ NLNEK+K EELK+SL+A+ SQ+G+IL+V+A KT K +GQAWV+F ++++A+NA R +Q F FY K MR+QYA+T+SD +A  DG+  P+EKRK+ ++K  ++K + +          S P A   +    Y     G  S  P  PAPPNNILFIQNLP ETT MMLQ+LF QYPGF+EVRM+E KPGIAFVEY D+ QS VAMQALQGFKITP NPM I+YAKK
Sbjct:    5 DIPPNQTVYLRNLNEKVKKEELKRSLYALCSQYGRILDVVALKTPKLRGQAWVVFSEITAATNAFRGLQEFDFYGKRMRVQYAKTRSDCLATEDGSTAPKEKRKKQEEKAAEKKRRAEE------AQQSGPNAAAQSNGTGYQASRLGKTSQEP--PAPPNNILFIQNLPAETTSMMLQILFQQYPGFREVRMIEAKPGIAFVEYEDDSQSMVAMQALQGFKITPYNPMAISYAKK 232
[Close]
BLAST of Ca_00968 vs. DB:Swiss
Match: SNRPA_HUMAN (U1 small nuclear ribonucleoprotein A OS=Homo sapiens OX=9606 GN=SNRPA PE=1 SV=3)

HSP 1 Score: 196.823 bits (499), Expect = 3.750e-61
Identity = 132/281 (46.98%), Postives = 166/281 (59.07%), Query Frame = 1 
Query:   16 AVSETPQNMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXXANLAGMGLNPSYPGAYGATPAIP---------------------------------------------YPGGAKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            AV ET  N TIYINNLNEKIK +ELKKSL+A+FSQFG+IL++L  ++LK +GQA+VIF++VSSA+NALR MQGFPFYDKPMRIQYA+T SDIIAK  GTFV R++++       +        + G G  P      G  P +P                                              PG      P +  PPN+ILF+ NLP ET  +ML MLF Q+PGFKEVR+V  +  IAFVE+ +E+Q+  A  ALQGFKIT  N M I++AKK
Sbjct:    2 AVPETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRKREKRKPKSQETPATKKAVQGGGATPVVGAVQGPVPGMPPMTQAPRIMHHMPGQPPYMPPPGMIPPPGLAPGQIPPGAMPPQQLMPGQMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGAARDALQGFKITQNNAMKISFAKK 282
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BLAST of Ca_00968 vs. DB:Swiss
Match: SNRPA_DROME (U1 small nuclear ribonucleoprotein A OS=Drosophila melanogaster OX=7227 GN=snf PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.124e-60
Identity = 125/231 (54.11%), Postives = 154/231 (66.67%), Query Frame = 1 
Query:   37 NMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXXANLAGMGLNPSYPGAYGATPAIPYPGGAKSMVPEAPA--PPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            N TIYINNLNEKIK EELKKSL+A+FSQFG+IL+++A KTLK +GQA+VIF+++ SASNALR MQGFPFYDKPM+I Y+++ SDI+AK  GTF  R K+ +                         PG          P  A++  P A    PPN ILF+ NLP ET  MML MLF Q+PGFKEVR+V  +  IAFVE+  E+QS  A +ALQGFKITP + M IT+AKK
Sbjct:    6 NQTIYINNLNEKIKKEELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIGSASNALRTMQGFPFYDKPMQIAYSKSDSDIVAKIKGTFKERPKKVKPPK--------------------PAPGTDEKKDKKKKPSSAENSNPNAQTEQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFTTELQSNAAKEALQGFKITPTHAMKITFAKK 216
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BLAST of Ca_00968 vs. DB:Swiss
Match: RU2B_MOUSE (U2 small nuclear ribonucleoprotein B'' OS=Mus musculus OX=10090 GN=Snrpb2 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.568e-60
Identity = 123/230 (53.48%), Postives = 158/230 (68.70%), Query Frame = 1 
Query:   37 NMTIYXXXXXXXXXXXXXXXXXHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPXXXXXXXXXXXXXXXXXXXANLAGMGLNPSYPGAYGATPAIPYPGGAKSMVPEAPA-PPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 723
            N TIYINN+N+KIK EELK+SL+A+FSQFG +++++A KT+K +GQA+VIF+++ S++NALRQ+QGFPFY KPMRIQYA+T SDII+K  GTF  +EK+K         +    AN          PG    TP      G  +  P+ P  PPN ILF+ NLP ET  MML MLF Q+PGFKEVR+V  +  IAFVE+ ++ Q+  A  ALQGFKITP + M ITYAKK
Sbjct:    6 NHTIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELGSSTNALRQLQGFPFYGKPMRIQYAKTDSDIISKMRGTFADKEKKKEKKKAKTMEQAAAAAN--------KKPGQ--GTPNAANTQGTAAPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHDIAFVEFENDGQAGAARDALQGFKITPSHAMKITYAKK 225
The following BLAST results are available for this feature:
BLAST of Ca_00968 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 18
Match NameE-valueIdentityDescription
RU1A_ARATH1.109e-7561.25U1 small nuclear ribonucleoprotein A OS=Arabidopsi... [more]
RU1A_ORYSJ2.556e-7261.86U1 small nuclear ribonucleoprotein A OS=Oryza sati... [more]
RU1A_ORYSI2.556e-7261.86U1 small nuclear ribonucleoprotein A OS=Oryza sati... [more]
RU2B1_ARATH1.008e-6051.06U2 small nuclear ribonucleoprotein B'' OS=Arabidop... [more]
RU2B2_ARATH2.482e-5950.64U2 small nuclear ribonucleoprotein B'' 2 OS=Arabid... [more]
RU2B_ORYSI2.657e-5348.72U2 small nuclear ribonucleoprotein B'' OS=Oryza sa... [more]
RU2B_ORYSJ5.920e-5348.29U2 small nuclear ribonucleoprotein B'' OS=Oryza sa... [more]
SNRPA_HUMAN6.774e-4942.70U1 small nuclear ribonucleoprotein A OS=Homo sapie... [more]
SNRPA_PIG5.734e-4842.35U1 small nuclear ribonucleoprotein A OS=Sus scrofa... [more]
SNRPA_BOVIN1.668e-4742.35U1 small nuclear ribonucleoprotein A OS=Bos taurus... [more]

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BLAST of Ca_00968 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
I1NCF8_SOYBN4.134e-10077.59Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I1JRV0_SOYBN7.052e-10077.59Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
C6TMN2_SOYBN1.571e-9977.18Putative uncharacterized protein OS=Glycine max PE... [more]
C6SZ90_SOYBN7.797e-9977.18Putative uncharacterized protein OS=Glycine max PE... [more]
B7FJ52_MEDTR1.330e-9877.14Putative uncharacterized protein OS=Medicago trunc... [more]
I1NCF9_SOYBN3.066e-9584.54Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I3S8R6_MEDTR4.427e-9478.02Uncharacterized protein OS=Medicago truncatula PE=... [more]
Q41498_SOLTU3.508e-9172.03U1snRNP-specific protein, U1A OS=Solanum tuberosum... [more]
M1D4N8_SOLTU1.021e-9072.03Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
K4CV97_SOLLC8.640e-9071.61Uncharacterized protein OS=Solanum lycopersicum GN... [more]

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BLAST of Ca_00968 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RU1A_ARATH2.402e-9771.25U1 small nuclear ribonucleoprotein A OS=Arabidopsi... [more]
RU1A_ORYSJ1.060e-9473.31U1 small nuclear ribonucleoprotein A OS=Oryza sati... [more]
RU1A_ORYSI1.060e-9473.31U1 small nuclear ribonucleoprotein A OS=Oryza sati... [more]
RU2B1_ARATH3.496e-7957.20U2 small nuclear ribonucleoprotein B'' OS=Arabidop... [more]
RU2B2_ARATH1.185e-7657.02U2 small nuclear ribonucleoprotein B'' 2 OS=Arabid... [more]
RU2B_ORYSI9.239e-7056.78U2 small nuclear ribonucleoprotein B'' OS=Oryza sa... [more]
RU2B_ORYSJ1.776e-6956.36U2 small nuclear ribonucleoprotein B'' OS=Oryza sa... [more]
SNRPA_HUMAN3.750e-6146.98U1 small nuclear ribonucleoprotein A OS=Homo sapie... [more]
SNRPA_DROME2.124e-6054.11U1 small nuclear ribonucleoprotein A OS=Drosophila... [more]
RU2B_MOUSE3.568e-6053.48U2 small nuclear ribonucleoprotein B'' OS=Mus musc... [more]
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InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 169..228
score: 1.9
IPR000504RNA recognition motif domainSMARTSM00360RNA recognition motifcoord: 15..89
score: 1e-13coord: 168..237
score: 2.4
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 14..93
score: 14.709coord: 167..241
score: 12
IPR012677Nucleotide-binding, alpha-beta plaitGENE3D3.30.70.330no descriptioncoord: 9..96
score: 1.4e-22coord: 160..240
score: 8.4
IPR024888U1 small nuclear ribonucleoprotein A/U2 small nuclear ribonucleoprotein B''PANTHERPTHR10501U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN Bcoord: 6..241
score: 2.8e
NoneNo IPR availablePFAMPF13893RRM_5coord: 34..91
score: 3.5
NoneNo IPR availableSEGsegsegcoord: 18..34
score: NAcoord: 108..126
score
NoneNo IPR availableSUPERFAMILY54928RNA-binding domain, RBDcoord: 11..241
score: 2.8

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_00968_v1.0_kabuli ID=Ca_00968_v1.0_kabuli; Name=Ca_00968; organism=Cicer arietinum; type=mRNA; length=726bp
ATGTCCGAAACAAATGCAGTCTCCGAAACCCCTCAAAACATGACCATCTA
CATCAACAACCTCAACGAAAAAATCAAGATTGAAGAGTTGAAGAAGTCCT
TGCACGCTGTTTTCAGCCAATTTGGGAAGATACTTGAGGTGTTGGCTTTC
AAAACTCTGAAACATAAGGGTCAAGCTTGGGTGATTTTTGAGGATGTATC
TTCTGCTTCTAATGCACTTAGGCAAATGCAAGGTTTCCCTTTCTACGATA
AGCCCATGAGAATACAGTATGCCAGGACTAAATCTGATATAATAGCAAAA
GCAGATGGTACTTTTGTTCCTCGGGAAAAACGGAAGAGGCACGATGACAA
AGGCAAAAAACGGAAGGACCAACACGATGCTAATTTAGCTGGAATGGGCT
TAAATCCTTCTTATCCCGGTGCTTATGGTGCAACACCTGCTATACCTTAT
CCAGGTGGTGCAAAATCCATGGTACCTGAGGCTCCGGCACCTCCCAATAA
TATTCTCTTTATTCAGAATCTTCCCAATGAAACCACTCCCATGATGCTTC
AAATGCTCTTTCTTCAATATCCTGGGTTCAAGGAAGTTAGAATGGTTGAA
ACGAAGCCAGGAATTGCTTTTGTGGAATATGGAGATGAGATGCAATCCAC
AGTGGCTATGCAGGCACTGCAAGGTTTCAAGATAACCCCACAAAACCCTA
TGTTGATAACTTATGCCAAGAAATAG
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protein sequence of Ca_00968_v1.0_kabuli

>Ca_00968_v1.0_kabuli ID=Ca_00968_v1.0_kabuli; Name=Ca_00968_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=241bp
MSETNAVSETPQNMTIYINNLNEKIKIEELKKSLHAVFSQFGKILEVLAF
KTLKHKGQAWVIFEDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAK
ADGTFVPREKRKRHDDKGKKRKDQHDANLAGMGLNPSYPGAYGATPAIPY
PGGAKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVE
TKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK
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mRNA from alignment at Ca3:36512886..36516351-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_00968_v1.0_kabuli ID=Ca_00968_v1.0_kabuli; Name=Ca_00968; organism=Cicer arietinum; type=mRNA; length=3466bp; location=Sequence derived from: Ca3:36512886..36516351- (Cicer arietinum
ATGTCCGAAACAAATGCAGTCTCCGAAACCCCTCAAAACATGACCATCTA
CATCAACAACCTCAACGAAAAAATCAAGATTGAAGGTTCATTAATCATTT
CAATTTTTCCGTTACAACAATTTCAATAGCTACATTTATATACTCTTTAT
TAATTATGTTAATGTGGATGCAGAGTTGAAGAAGTCCTTGCACGCTGTTT
TCAGCCAATTTGGGAAGATACTTGAGGTGTTGGCTTTCAAAACTCTGAAA
CATAAGGGTCAAGCTTGGGTGATTTTTGAGGATGTATCTTCTGCTTCTAA
TGCACTTAGGCAAATGCAAGGTTTCCCTTTCTACGATAAGCCCATGGTAC
ATATCTTCAATTTCACTTTTCAACTCTTCAATTTTTTGTTTTACATTTAC
TTTGTATTTTCATTTTAATTTGAGGTGTTTAGGTTTCGTTTTGATTAGGA
TTTAGTTTTCTAGTTAGAGTTTTTGGGTGTAATTTTGTTCTAATTGATTA
TAATGCTAGTTATTAAACATGGAATGGAATGTGTAACAATCTTTAACTTG
ACAGAAGTTTCTCTGGCAGAAACTTGTTTGGAAATTTAGCATAATTAACG
TCCATTAGATTAGAGAAAACAAAGAAGAATGTTATAGAGTAATGCTTATT
AATGGAAAAGTGCGGAAGGAAGAACCCAAAACATGTCAAATGTTGCATGG
AATTGCACTTGTCTTGTGACGGGAAGCAATAGTGGCTATCGTGTTTGCTA
TGTTGTTTGTGGAATAAATTCTTTATCATATATGCTCCGAGTCCCTCCTC
CCCTATCCTCGCTGAACAAAGTAGGAAAATCTTTATCTTGGAAGGATAAT
GGATATTAGAAAGAAATAGTCTAGGACACTAGGAAGTAGTAAAACTGATG
CCAAGGACTGGCCGAGTACAACTTGTCTTACAATGTCAAGGATTCATCAA
ATACAATTGTCAATTGTGATTAATTAAACACATTCTTGTCAGTGGTTTAC
CGTTTTGAGATAAGTTAACTACGTCATAGGCCTTCAGTATAAATGTAATT
TAATGGTATCCTGTAAGAATAGCCATGAGATTGGCTTCCTTCACTATAAT
TTAGTTGAATTAGCTTCTTGTTTTGTCTTTGATTGAGTATCCTGCAAGCA
TAGCCATGAGATCGACCATTGATCCAGAGGTGGATCTTCTCATGGACAGG
GAAATGTAATGTCCACCCCAATATATTTTTCTTCTCAGAGGTTTTGGGAT
CAATTCCAACATGCACTGACAAGGTTTGAACCCAGTACATGAGGGTCCAA
AATATCATAACAACCACTATGTCAAGAACCCATTAACATTATTATGTAGC
TTATTTATTTGACCTTCTCAATAATATCATCCAAGCTCCGGCATTGCACT
GACCCCTGATGGTAGTTGGGGGAAAACATACTAGAAGTTTCAACTCCAAG
ATTTAACTCTCTGACATTGTGGGTAAAATTTGCTTGAAGTCACAGTCCAC
TTCTGTTGTGAACAACCACTATTAGGTTCAATTGAGCTAGCTTTATCACA
AGTGTGTAAATGAAATTATATATTTTAGATTTATGTGACACACCAAAATA
AAACTATTTTCGGTGATGCATGGTCTGACTTCATGCGTGGCATGACAAAA
TTTGCAATTAGTTCTATCTGAATGTTTCCTGGCTATAAAAGGTGTTTTAT
ATCATTGTGTGCTGCAATGAAAGTTGTTTGTTATGTGCTGTTGGAGCTTT
ATTTTAATTGGTGATATACATGGTTGTCTTGCTAATCTGTGATATGGTTC
CTTATTTGGTCGTGCTGGATATATCTGTTAATTTTTGTTTCAAATCTCTA
GCATAATTTCATAAATTTCCACTCTTATATGTATCCATTTTTCTATTTTC
TAAATGGTAAAGTAGATGTATTTAATATACAGCTCAGTCAGTAAAAAAAT
AGAATATTTTTTGAGAAATGAATTTGATTATAATCACACATCTTGGGGTA
TAGTAAACAACTTGCTCATTGTTGTACCTCGTCTCCTTTCTCCTTGTTGT
TAGTTTATATCATTTCCATAGACAGAACATATTCTCTTGCAAGAAATTGA
ATTGGATATTGCAATAAATGCAGAGAATACAGTATGCCAGGACTAAATCT
GATATAATAGCAAAAGCAGATGGTACTTTTGTTCCTCGGGAAAAACGGAA
GAGGCACGATGACAAAGGTATAAATCTCTAAACTCTCTGTTCTTTTTTAA
GGATATTGCACTGTAAGTTTAAACCCATAGGGGATCATAAGCAAACTAAA
CTAAGCTCATTTCTTCTTGAAAATGAGGGCCCAAGTAACTGAATGTTTAG
TTATGGCAAAAAACGGCCCATAGATTTTCTCTTTTTTGGTGGTGGTGGTG
TTTTTTTCTGGTTTGGCAACGAGGAGGCTTTTGGGCCATGCATTCTGTAA
CTGATAATATTGAAGAAGAAAACTTCTAATAAATGTAATTTCCGACTCAT
GCCTGCCTCTAGGCACCTGAGGGCTAAGGGAATTAGGGAAGTGTGTTTAT
TGACCTTGAGAAAATTGTTATATTTTTTATGCACCCAATGGCAAAGAAAA
TACTTACACAGTCACACTATACTTTTCACTTTTTAGCATTTAGTATGGAT
GCAACTCTTTTAAAAATGAAAAGCTGCATAATATACGCCGTATAAATATA
CATAGTGAAATTACATTTTGTGGCAGGCAAAAAACGGAAGGACCAACACG
ATGCTAATTTAGCTGGAATGGGCTTAAATCCTTCTTATCCCGGTGCTTAT
GGTGCAACACCTGCTGTAAGTTTCTCTGCTGTTGTAATTGTTTTAGTCAA
TGGTCATGTTAGAGGCATCTTAATATGCTAGTATTTTGTTTCATTTTAAT
CTAGCACCTTCTTAATTCTTAGAGTTATGATATTTCTCGGACTGCAAAGT
TTTTTTTTTAATTCATCGGTTTGCCTTTGAAAAATATTTTTTGAATTTCT
AATAAAAGAAAATGTTTTTGTTCTAAAAAATGAGATAGTTGGAAGATATT
ATATCATCAACATAAAATTAAGATGAGATGACACTATCTGTTTCAAAGCA
AATTATTCAAATACACAGAAGCACAAACAATTTTGATTCTGCATTTGTTA
CACGCCCTTTCTAATAATGCAGCTATCCCAGATACCTTATCCAGGTGGTG
CAAAATCCATGGTACCTGAGGCTCCGGCACCTCCCAATAATATTCTCTTT
ATTCAGAATCTTCCCAATGAAACCACTCCCATGATGCTTCAAATGCTCTT
TCTTCAATATCCTGGGTTCAAGGAAGTTAGAATGGTTGAAACGAAGCCAG
GAATTGCTTTTGTGGAATATGGAGATGAGATGCAATCCACAGTGGCTATG
CAGGCACTGCAAGGTTTCAAGATAACCCCACAAAACCCTATGTTGATAAC
TTATGCCAAGAAATAG
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Coding sequence (CDS) from alignment at Ca3:36512886..36516351-

>Ca_00968_v1.0_kabuli ID=Ca_00968_v1.0_kabuli; Name=Ca_00968; organism=Cicer arietinum; type=CDS; length=726bp; location=Sequence derived from: Ca3:36512886..36516351- (Cicer arietinum
ATGTCCGAAACAAATGCAGTCTCCGAAACCCCTCAAAACATGACCATCTA
CATCAACAACCTCAACGAAAAAATCAAGATTGAAGAGTTGAAGAAGTCCT
TGCACGCTGTTTTCAGCCAATTTGGGAAGATACTTGAGGTGTTGGCTTTC
AAAACTCTGAAACATAAGGGTCAAGCTTGGGTGATTTTTGAGGATGTATC
TTCTGCTTCTAATGCACTTAGGCAAATGCAAGGTTTCCCTTTCTACGATA
AGCCCATGAGAATACAGTATGCCAGGACTAAATCTGATATAATAGCAAAA
GCAGATGGTACTTTTGTTCCTCGGGAAAAACGGAAGAGGCACGATGACAA
AGGCAAAAAACGGAAGGACCAACACGATGCTAATTTAGCTGGAATGGGCT
TAAATCCTTCTTATCCCGGTGCTTATGGTGCAACACCTGCTATACCTTAT
CCAGGTGGTGCAAAATCCATGGTACCTGAGGCTCCGGCACCTCCCAATAA
TATTCTCTTTATTCAGAATCTTCCCAATGAAACCACTCCCATGATGCTTC
AAATGCTCTTTCTTCAATATCCTGGGTTCAAGGAAGTTAGAATGGTTGAA
ACGAAGCCAGGAATTGCTTTTGTGGAATATGGAGATGAGATGCAATCCAC
AGTGGCTATGCAGGCACTGCAAGGTTTCAAGATAACCCCACAAAACCCTA
TGTTGATAACTTATGCCAAGAAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: KEGG ORTHOLOGY
TermDefinition
K11091SNRPA; U1 small nuclear ribonucleoprotein A
Vocabulary: KEGG PATHWAY
TermDefinition
ko03020RNA polymerase
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR024888RRM_U1_A/B''
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO:0017069snRNA binding