Ca_01115, Ca_01115_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_01115
Unique NameCa_01115_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length402
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca3chromosomeCa3:37767099..37767988 +Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
cavuR164Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR211Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR193Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR247Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0298Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0338Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0022Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0433Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0437Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0622Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0670Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0817Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0818Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1109Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL029Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL363Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL484Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR173Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR194Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR210Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR207Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR219Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR222Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR207Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR219Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR223Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR193Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR231Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR247Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR265Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR272Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR155Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR210Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR081Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR089Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR106Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL247Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL336Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL457Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR184Cicer arietinum
cacarR210Cicer arietinum
cacarR226Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Vigun01g211300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
jg31092.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.5g176240.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Psat04G0090300-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
jg19989.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-XM_014640120.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Tiffany.R1.5g138280.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Phvul.001G226500.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
LR48_mrnaVigan01g301400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Va01G097320.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Psat03G0062300-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_012714122.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_004508111.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_01115-CDS1Ca_01115-CDS1Cicer arietinumCDS
Ca_01115-CDS2Ca_01115-CDS2Cicer arietinumCDS
Ca_01115-CDS3Ca_01115-CDS3Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_01115_v1.0_kabuliCa_01115_v1.0_kabuliCicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_01115 vs. SwissProt
Match: GAT16_ARATH (GATA transcription factor 16 OS=Arabidopsis thaliana GN=GATA16 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.349e-15
Identity = 50/101 (49.50%), Postives = 59/101 (58.42%), Query Frame = 1 
Query:   97 PLWRGGPNGPKTLCNACGIRYRKRRGCCNXXXXXXXXXXXXXXNGVGGNDDLRVCLKMKLVALGEEVLLNSVMKKQRMIKLGEEEQAAVCLMAISCGFVFA 399
            PLWRGGP GPK+LCNACGIR RK+R                  +  GGN      LK  L+ LG  +   S ++KQR  KLGEEEQAAV LMA+S G V+A
Sbjct:   47 PLWRGGPVGPKSLCNACGIRNRKKR-----RGGTEDNKKLKKSSSGGGNRKFGESLKQSLMDLG--IRKRSTVEKQRQ-KLGEEEQAAVLLMALSYGSVYA 139
[Close]
BLAST of Ca_01115 vs. SwissProt
Match: GAT15_ARATH (GATA transcription factor 15 OS=Arabidopsis thaliana GN=GATA15 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 5.232e-15
Identity = 47/96 (48.96%), Postives = 56/96 (58.33%), Query Frame = 1 
Query:   97 PLWRGGPNGPKTLCNACGIRYRKRRGCCNXXXXXXXXXXXXXXNGVGGNDDLRVCLKMKLVALGEEVLL-NSVMKKQRMIKLGEEEQAAVCLMAIS 381
            PLWRGGP GPK+LCNACGIR RK+R                  N   G+      LK +L+ LG EV++  S  + QR  KLGEEEQAAV LMA+S
Sbjct:   52 PLWRGGPAGPKSLCNACGIRNRKKRRTLISNRSEDKKKKSHNRNPKFGDS-----LKQRLMELGREVMMQRSTAENQRRNKLGEEEQAAVLLMALS 142
[Close]
BLAST of Ca_01115 vs. SwissProt
Match: GAT17_ARATH (GATA transcription factor 17 OS=Arabidopsis thaliana GN=GATA17 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.575e-11
Identity = 50/138 (36.23%), Postives = 65/138 (47.10%), Query Frame = 1 
Query:   97 PLWRGGPNGPKTLCNACGIRYRKRR-----------------GCCNXXXXXXXXXXXXXXNGVGG-----NDDLRVCLKM------------KLVALGEEVLL---NSVMKKQRMIKLGEEEQAAVCLMAISCGFVFA 399
            PLWRGGP GPK+LCNACGI+ RK+R                  C N              N V       +DD ++C               K + LG +V +   ++V KK+   KLGEEE+AAV LMA+SC  V+A
Sbjct:   53 PLWRGGPAGPKSLCNACGIKSRKKRQAALGMRSEEKKKNRKSNCNNDLNLDHRNAKKYKINIVDDGKIDIDDDPKICNNKRSSSSSSNKGVSKFLDLGFKVPVMKRSAVEKKRLWRKLGEEERAAVLLMALSCSSVYA 190
[Close]
BLAST of Ca_01115 vs. SwissProt
Match: GAT23_ARATH (GATA transcription factor 23 OS=Arabidopsis thaliana GN=GATA23 PE=2 SV=2)

HSP 1 Score: 65.0846 bits (157), Expect = 1.334e-10
Identity = 42/106 (39.62%), Postives = 58/106 (54.72%), Query Frame = 1 
Query:   97 PLWRGGPNGPKTLCNACGIRYRKRRGCCNXXXXXXXXXXXXXXNGVGGNDDLRVCLKMKLVALGEEVLLNS-----VMKKQRMIKLGEEEQAAVCLMAISCGFVFA 399
            P+WRGGP GPK+LCNACGIR+RK+R                    +G    + +    K +A  +  LL+S      +KK+R +K  EEEQAA+CL+ +SC  V A
Sbjct:   37 PMWRGGPTGPKSLCNACGIRHRKQR----------------RSELLG----IHIIRSHKSLASKKINLLSSSHGGVAVKKRRSLK--EEEQAALCLLLLSCSSVLA 120
[Close]
BLAST of Ca_01115 vs. TrEMBL
Match: G7KWI0_MEDTR (GATA transcription factor OS=Medicago truncatula GN=MTR_7g112330 PE=4 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 5.068e-42
Identity = 91/133 (68.42%), Postives = 93/133 (69.92%), Query Frame = 1 
Query:    1 MGIMDQMDKECCSYKEMSVIXXXXXXXXXXXXPLWRGGPNGPKTLCNACGIRYRKRRGCCNXXXXXXXXXXXXXXNGVGGNDDLRVCLKMKLVALGEEVLLNSVMKKQRMIKLGEEEQAAVCLMAISCGFVFA 399
            MGIMDQMDKECCSY EM VI            PLWRGGPNGPKTLCNACGIRYRKRRGCC+                   NDDL  CLKMKLVALGEE LL    KKQRMIKLGEEEQAAVCLMA+SCGFVFA
Sbjct:    1 MGIMDQMDKECCSYDEMGVIKKFCADCKTTKTPLWRGGPNGPKTLCNACGIRYRKRRGCCSKGQERERKREKAEATS-SDNDDLSECLKMKLVALGEEFLL---QKKQRMIKLGEEEQAAVCLMALSCGFVFA 129
[Close]
BLAST of Ca_01115 vs. TrEMBL
Match: A5BCR3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042395 PE=4 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 4.175e-20
Identity = 66/134 (49.25%), Postives = 76/134 (56.72%), Query Frame = 1 
Query:    7 IMDQMDKECCSYKEMSVIXXXXXXXXXXXXPLWRGGPNGPKTLCNACGIRYRKRRGCCNXXXXXXXXXXXXXXNGVGGNDDLRVCLKMKLVALGEEVLL---NSVMKKQRMIKLGEEEQAAVCLMAISCGFVFA 399
            +MD   KE  S +EM+ I            PLWRGGP GPK+LCNACGIRYRKRR                      G+ DL   LK  L+ALG EV++    S +KKQR  KLGEEEQAAV LMA+SCG VFA
Sbjct:    1 MMDLSKKESLS-EEMNEIKKCCTDCKTTKTPLWRGGPAGPKSLCNACGIRYRKRRSSMVGVNKKKERMN-------SGSHDLSETLKQSLMALGNEVMMQRQRSSVKKQRR-KLGEEEQAAVLLMALSCGSVFA 125
[Close]
BLAST of Ca_01115 vs. TrEMBL
Match: F6I4R1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g01520 PE=4 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 5.452e-20
Identity = 66/133 (49.62%), Postives = 75/133 (56.39%), Query Frame = 1 
Query:   10 MDQMDKECCSYKEMSVIXXXXXXXXXXXXPLWRGGPNGPKTLCNACGIRYRKRRGCCNXXXXXXXXXXXXXXNGVGGNDDLRVCLKMKLVALGEEVLL---NSVMKKQRMIKLGEEEQAAVCLMAISCGFVFA 399
            MD   KE  S +EM+ I            PLWRGGP GPK+LCNACGIRYRKRR                      G+ DL   LK  L+ALG EV++    S +KKQR  KLGEEEQAAV LMA+SCG VFA
Sbjct:    1 MDLSKKESLS-EEMNEIKKCCTDCKTTKTPLWRGGPAGPKSLCNACGIRYRKRRSSMVGVNKKKERMN-------SGSHDLSETLKQSLMALGNEVMMQRQRSSVKKQRR-KLGEEEQAAVLLMALSCGSVFA 124
[Close]
BLAST of Ca_01115 vs. TrEMBL
Match: D7SY67_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01450 PE=4 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.485e-17
Identity = 57/110 (51.82%), Postives = 67/110 (60.91%), Query Frame = 1 
Query:   97 PLWRGGPNGPKTLCNACGIRYRKRR--------GCCNXXXXXXXXXXXXXXNGVGGNDDLRVCLKMKLVALGEEVLLN-SVMKKQRMIKLGEEEQAAVCLMAISCGFVFA 399
            PLWRGGP GPK+LCNACGIR RK+R        G  +               G  GN+ L   LK +L ALG EVLL  S ++KQR  KLGEEEQAAV LMA+S G+V+A
Sbjct:   45 PLWRGGPAGPKSLCNACGIRSRKKRRAFLGLNKGSTDDRKAKRSSNHSHNNGGGNGNNKLGDSLKRRLFALGREVLLQRSTVEKQRR-KLGEEEQAAVLLMALSYGYVYA 153
[Close]
BLAST of Ca_01115 vs. TrEMBL
Match: M5XTT2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013171mg PE=4 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 9.008e-15
Identity = 49/101 (48.51%), Postives = 60/101 (59.41%), Query Frame = 1 
Query:   97 PLWRGGPNGPKTLCNACGIRYRKRRGCCNXXXXXXXXXXXXXXNGVGGNDDLRVCLKMKLVALGEEVLLNSVMKKQRMIKLGEEEQAAVCLMAISCGFVFA 399
            PLWRGGP GPK+LCNACGIR RK+R                  N   G+      LK +L+ALG EVL+     +++  KLGEEEQAAV LMA+S G V+A
Sbjct:   41 PLWRGGPAGPKSLCNACGIRSRKKRRAILGLNKENPNDKKGKRNKQLGDG-----LKQRLLALGREVLMQRSTVERQRRKLGEEEQAAVLLMALSYGSVYA 136
[Close]
BLAST of Ca_01115 vs. TrEMBL
Match: B9HX95_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_880193 PE=4 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 9.008e-15
Identity = 48/101 (47.52%), Postives = 59/101 (58.42%), Query Frame = 1 
Query:   97 PLWRGGPNGPKTLCNACGIRYRKRRGCCNXXXXXXXXXXXXXXNGVGGNDDLRVCLKMKLVALGEEVLLNSVMKKQRMIKLGEEEQAAVCLMAISCGFVFA 399
            PLWRGGP GPK+LCNACGIR RK++                       N+     LK +L+ALG EVL+     ++R  KLGEEEQAAV LMA+S G V+A
Sbjct:   25 PLWRGGPAGPKSLCNACGIRSRKKKRDILGLNKGGAAANDKRAKKGSTNNGSSDGLKQRLLALGREVLVQGSTVERRRRKLGEEEQAAVLLMALSYGSVYA 125
[Close]
BLAST of Ca_01115 vs. TrEMBL
Match: Q850Z5_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=OSJNBb0027B08.10 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.537e-14
Identity = 42/101 (41.58%), Postives = 60/101 (59.41%), Query Frame = 1 
Query:   97 PLWRGGPNGPKTLCNACGIRYRKRRGCCNXXXXXXXXXXXXXXNGVGGNDDLRVCLKMKLVALGEEVLLNSVMKKQRMIKLGEEEQAAVCLMAISCGFVFA 399
            PLWRGGP+GPK+LCNACGIRYRK+R                            V +++++V  G+EV+L    + +R  +LGEEE+AA+ LMA+S G ++A
Sbjct:   36 PLWRGGPSGPKSLCNACGIRYRKKRREALGLDAGEGGAERQEKKKSKRERGEEVTMELRMVGFGKEVVLKQRRRMRRRRRLGEEEKAAILLMALSSGVIYA 136
[Close]
BLAST of Ca_01115 vs. TrEMBL
Match: A2XNM3_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14166 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.537e-14
Identity = 42/101 (41.58%), Postives = 60/101 (59.41%), Query Frame = 1 
Query:   97 PLWRGGPNGPKTLCNACGIRYRKRRGCCNXXXXXXXXXXXXXXNGVGGNDDLRVCLKMKLVALGEEVLLNSVMKKQRMIKLGEEEQAAVCLMAISCGFVFA 399
            PLWRGGP+GPK+LCNACGIRYRK+R                            V +++++V  G+EV+L    + +R  +LGEEE+AA+ LMA+S G ++A
Sbjct:   36 PLWRGGPSGPKSLCNACGIRYRKKRREALGLDAGEGGAERQEKKKSKRERGEEVTMELRMVGFGKEVVLKQRRRMRRRRRLGEEEKAAILLMALSSGVIYA 136
[Close]
BLAST of Ca_01115 vs. TrEMBL
Match: R0EY23_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10027332mg PE=4 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.621e-14
Identity = 49/102 (48.04%), Postives = 61/102 (59.80%), Query Frame = 1 
Query:   97 PLWRGGPNGPKTLCNACGIRYR-KRRGCCNXXXXXXXXXXXXXXNGVGGNDDLRVCLKMKLVALGEEVLLNSVMKKQRMIKLGEEEQAAVCLMAISCGFVFA 399
            PLWRGGP GPK+LCNACGIR R KRRG                 +  GGN      LK +L+ LG +   ++V K++R  KL EEEQAAV LMA++ G V+A
Sbjct:   43 PLWRGGPAGPKSLCNACGIRNRKKRRGTTEDDDDDKNKKLKNKSSSGGGNPKFGESLKQRLIDLGMKKSQSTVEKQRR--KLDEEEQAAVLLMALAYGSVYA 142
[Close]
BLAST of Ca_01115 vs. TrEMBL
Match: M1CB78_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400024783 PE=4 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.423e-14
Identity = 52/150 (34.67%), Postives = 73/150 (48.67%), Query Frame = 1 
Query:   10 MDQMDKECCSYKEMSVIXXXXXXXXXXXXPLWRGGPNGPKTLCNACGIRYRKRRGCCNXXXXXXXXXXXXXXNGVGGNDDLRVC----------------LKMKLVALGEEVLL-----NSVMKKQRMIKLGEEEQAAVCLMAISCGFVF 396
            MD   KE  S  E + I            PLWR GP+GPK+LCNACGI+YRK++                  +  G  +++  C                L++KL+ LG+EV++     +S+ K +   KL E E+AAV LMA+SCG VF
Sbjct:    1 MDPTQKEESSGSEATGISKSCSDCKTTKTPLWRSGPSGPKSLCNACGIKYRKKKSSPIGLTKGATKKKEKPLSNSGSTEEVEYCKKGKIGNGKDGKLSKVLRVKLMMLGKEVVILQRQRSSMKKPRNQRKLDEVERAAVLLMALSCGSVF 150
[Close]
BLAST of Ca_01115 vs. DB:Swiss
Match: GAT15_ARATH (GATA transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=GATA15 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 2.744e-20
Identity = 51/103 (49.51%), Postives = 64/103 (62.14%), Query Frame = 1 
Query:   97 PLWRGGPNGPKTLCNACGIRYRKRRGCCNXXXXXXXXXXXXXXNGVGGNDDLRVCLKMKLVALGEEVLLN-SVMKKQRMIKLGEEEQAAVCLMAIS-CGFVFA 399
            PLWRGGP GPK+LCNACGIR RK+R        E ++K+    N   G+      LK +L+ LG EV++  S  + QR  KLGEEEQAAV LMA+S    V+A
Sbjct:   52 PLWRGGPAGPKSLCNACGIRNRKKRRTLISNRSEDKKKKSHNRNPKFGD-----SLKQRLMELGREVMMQRSTAENQRRNKLGEEEQAAVLLMALSYASSVYA 149
[Close]
BLAST of Ca_01115 vs. DB:Swiss
Match: GAT16_ARATH (GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.292e-20
Identity = 53/102 (51.96%), Postives = 62/102 (60.78%), Query Frame = 1 
Query:   97 PLWRGGPNGPKTLCNACGIRYR-KRRGCCNXXXXXXXXXXXXXXNGVGGNDDLRVCLKMKLVALGEEVLLNSVMKKQRMIKLGEEEQAAVCLMAISCGFVFA 399
            PLWRGGP GPK+LCNACGIR R KRRG      + K+          GGN      LK  L+ LG  +   S ++KQR  KLGEEEQAAV LMA+S G V+A
Sbjct:   47 PLWRGGPVGPKSLCNACGIRNRKKRRGGTEDNKKLKKSSSG------GGNRKFGESLKQSLMDLG--IRKRSTVEKQRQ-KLGEEEQAAVLLMALSYGSVYA 139
[Close]
BLAST of Ca_01115 vs. DB:Swiss
Match: GAT17_ARATH (GATA transcription factor 17 OS=Arabidopsis thaliana OX=3702 GN=GATA17 PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 4.322e-11
Identity = 49/138 (35.51%), Postives = 67/138 (48.55%), Query Frame = 1 
Query:   97 PLWRGGPNGPKTLCNACGIRYRKRRGCCNXXXXXXXXXXXXXXNGVGGNDDLRVCLKMKL----------------------------------VALGEEVLL---NSVMKKQRMIKLGEEEQAAVCLMAISCGFVFA 399
            PLWRGGP GPK+LCNACGI+ RK+R        E+++K  ++      N D R   K K+                                  + LG +V +   ++V KK+   KLGEEE+AAV LMA+SC  V+A
Sbjct:   53 PLWRGGPAGPKSLCNACGIKSRKKRQAALGMRSEEKKKNRKSNCNNDLNLDHRNAKKYKINIVDDGKIDIDDDPKICNNKRSSSSSSNKGVSKFLDLGFKVPVMKRSAVEKKRLWRKLGEEERAAVLLMALSCSSVYA 190
[Close]
BLAST of Ca_01115 vs. DB:Swiss
Match: GAT23_ARATH (GATA transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=GATA23 PE=2 SV=2)

HSP 1 Score: 53.5286 bits (127), Expect = 6.623e-9
Identity = 20/25 (80.00%), Postives = 24/25 (96.00%), Query Frame = 1 
Query:   97 PLWRGGPNGPKTLCNACGIRYRKRR 171
            P+WRGGP GPK+LCNACGIR+RK+R
Sbjct:   37 PMWRGGPTGPKSLCNACGIRHRKQR 61
The following BLAST results are available for this feature:
BLAST of Ca_01115 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 4
Match NameE-valueIdentityDescription
GAT16_ARATH2.349e-1549.50GATA transcription factor 16 OS=Arabidopsis thalia... [more]
GAT15_ARATH5.232e-1548.96GATA transcription factor 15 OS=Arabidopsis thalia... [more]
GAT17_ARATH1.575e-1136.23GATA transcription factor 17 OS=Arabidopsis thalia... [more]
GAT23_ARATH1.334e-1039.62GATA transcription factor 23 OS=Arabidopsis thalia... [more]
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BLAST of Ca_01115 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7KWI0_MEDTR5.068e-4268.42GATA transcription factor OS=Medicago truncatula G... [more]
A5BCR3_VITVI4.175e-2049.25Putative uncharacterized protein OS=Vitis vinifera... [more]
F6I4R1_VITVI5.452e-2049.62Putative uncharacterized protein OS=Vitis vinifera... [more]
D7SY67_VITVI1.485e-1751.82Putative uncharacterized protein OS=Vitis vinifera... [more]
M5XTT2_PRUPE9.008e-1548.51Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
B9HX95_POPTR9.008e-1547.52Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q850Z5_ORYSJ1.537e-1441.58Expressed protein OS=Oryza sativa subsp. japonica ... [more]
A2XNM3_ORYSI1.537e-1441.58Putative uncharacterized protein OS=Oryza sativa s... [more]
R0EY23_9BRAS2.621e-1448.04Uncharacterized protein OS=Capsella rubella GN=CAR... [more]
M1CB78_SOLTU3.423e-1434.67Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]

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BLAST of Ca_01115 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 4
Match NameE-valueIdentityDescription
GAT15_ARATH2.744e-2049.51GATA transcription factor 15 OS=Arabidopsis thalia... [more]
GAT16_ARATH3.292e-2051.96GATA transcription factor 16 OS=Arabidopsis thalia... [more]
GAT17_ARATH4.322e-1135.51GATA transcription factor 17 OS=Arabidopsis thalia... [more]
GAT23_ARATH6.623e-980.00GATA transcription factor 23 OS=Arabidopsis thalia... [more]
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InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000679Zinc finger, GATA-typePFAMPF00320GATAcoord: 24..57
score: 1.1
IPR000679Zinc finger, GATA-typeSMARTSM00401zinc finger binding to DNA consensus sequenccoord: 18..70
score: 1.4
IPR000679Zinc finger, GATA-typePROSITEPS00344GATA_ZN_FINGER_1coord: 24..49
score
IPR000679Zinc finger, GATA-typePROFILEPS50114GATA_ZN_FINGER_2coord: 24..54
score: 12
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10no descriptioncoord: 20..72
score: 4.4
NoneNo IPR availablePANTHERPTHR10071TRANSCRIPTION FACTOR GATA (GATA BINDING FACTOR)coord: 23..57
score: 2.5
NoneNo IPR availableSEGsegsegcoord: 21..32
score: NAcoord: 62..75
score
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 18..84
score: 5
NoneNo IPR availableSEGsegsegcoord: 43..56
score
NoneNo IPR availableSEGsegsegcoord: 16..37
score
NoneNo IPR availableSEGsegsegcoord: 29..42
score
NoneNo IPR availableSEGsegsegcoord: 52..81
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_01115_v1.0_kabuli ID=Ca_01115_v1.0_kabuli; Name=Ca_01115; organism=Cicer arietinum; type=mRNA; length=402bp
ATGGGAATCATGGATCAAATGGATAAGGAATGTTGTTCATATAAGGAAAT
GAGTGTGATCAAGAAGTGTTGTTCTGATTGCAAAACCACCAAAACTCCAC
TTTGGAGAGGAGGACCAAATGGCCCCAAGACGTTGTGCAACGCTTGCGGA
ATTAGGTACAGGAAAAGAAGGGGTTGTTGTAATAAGAAAGGACAAGAAAA
GGAAAGGAAGAGAGAGAGAGCAGAAAATGGTGTTGGTGGTAACGATGATT
TGAGAGTGTGTTTGAAAATGAAGTTAGTGGCGTTGGGTGAAGAGGTTTTG
TTGAATTCGGTTATGAAGAAACAAAGGATGATCAAATTAGGGGAAGAGGA
ACAGGCTGCTGTGTGTTTGATGGCAATTTCCTGTGGCTTTGTTTTTGCTT
GA
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protein sequence of Ca_01115_v1.0_kabuli

>Ca_01115_v1.0_kabuli ID=Ca_01115_v1.0_kabuli; Name=Ca_01115_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=133bp
MGIMDQMDKECCSYKEMSVIKKCCSDCKTTKTPLWRGGPNGPKTLCNACG
IRYRKRRGCCNKKGQEKERKRERAENGVGGNDDLRVCLKMKLVALGEEVL
LNSVMKKQRMIKLGEEEQAAVCLMAISCGFVFA
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mRNA from alignment at Ca3:37767099..37767988+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_01115_v1.0_kabuli ID=Ca_01115_v1.0_kabuli; Name=Ca_01115; organism=Cicer arietinum; type=mRNA; length=890bp; location=Sequence derived from: Ca3:37767099..37767988+ (Cicer arietinum
ATGGGAATCATGGATCAAATGGATAAGGTATATTTGAAGTATTCTTAAAT
TATCATTAGCTAGCTTCTTCTACTTGCGTTGTTGTAATGAAATGGTAAAC
ATTTTTTTTTAATTGTTTAAAAATAATAGGAATGTTGTTCATATAAGGAA
ATGAGTGTGATCAAGAAGTGTTGTTCTGATTGCAAAACCACCAAAACTCC
ACTTTGGAGAGGAGGACCAAATGGCCCCAAGGTATTTTATTTACCCATTA
CAAATTTGTAATCTATTTCATCAATTTTGTTACTTCTAGTTGTTAATTTC
CATTTTTTTCCCTTTCAACCAACCACCACCTTGATACTGTTTCATTTCTT
TTCTTTTCAACTTTTCCCTCTTAGTCTTTTTGCTCTATGATTGTTTTATT
TTGTTTATCTTTTTGGTTGTCATATTTATTTTGCACTTTTTGTTCTATCC
TTTTAGACCAATTGATGTCATTGTTCGCTATTAATTTGTTTTGGGTGTGT
CAATTTGTTTAAAGGATCACTTTGATGAAATGGTTTTTTTTTTCAATCTA
AAAAAGGGATTTTCTTTTTTACTATTTGTAAAATTCTTTAATCTTTTTGC
TTTTTTGGGTGATGTAGACGTTGTGCAACGCTTGCGGAATTAGGTACAGG
AAAAGAAGGGGTTGTTGTAATAAGAAAGGACAAGAAAAGGAAAGGAAGAG
AGAGAGAGCAGAAAATGGTGTTGGTGGTAACGATGATTTGAGAGTGTGTT
TGAAAATGAAGTTAGTGGCGTTGGGTGAAGAGGTTTTGTTGAATTCGGTT
ATGAAGAAACAAAGGATGATCAAATTAGGGGAAGAGGAACAGGCTGCTGT
GTGTTTGATGGCAATTTCCTGTGGCTTTGTTTTTGCTTGA
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Coding sequence (CDS) from alignment at Ca3:37767099..37767988+

>Ca_01115_v1.0_kabuli ID=Ca_01115_v1.0_kabuli; Name=Ca_01115; organism=Cicer arietinum; type=CDS; length=402bp; location=Sequence derived from: Ca3:37767099..37767988+ (Cicer arietinum
ATGGGAATCATGGATCAAATGGATAAGGAATGTTGTTCATATAAGGAAAT
GAGTGTGATCAAGAAGTGTTGTTCTGATTGCAAAACCACCAAAACTCCAC
TTTGGAGAGGAGGACCAAATGGCCCCAAGACGTTGTGCAACGCTTGCGGA
ATTAGGTACAGGAAAAGAAGGGGTTGTTGTAATAAGAAAGGACAAGAAAA
GGAAAGGAAGAGAGAGAGAGCAGAAAATGGTGTTGGTGGTAACGATGATT
TGAGAGTGTGTTTGAAAATGAAGTTAGTGGCGTTGGGTGAAGAGGTTTTG
TTGAATTCGGTTATGAAGAAACAAAGGATGATCAAATTAGGGGAAGAGGA
ACAGGCTGCTGTGTGTTTGATGGCAATTTCCTGTGGCTTTGTTTTTGCTT
GA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000679Znf_GATA
IPR013088Znf_NHR/GATA
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
GO:0008270zinc ion binding
GO:0043565sequence-specific DNA binding