Ca_09494, Ca_09494_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_09494 vs. TrEMBL
Match: G7KY63_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_7g073370 PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 1.402e-72 Identity = 142/221 (64.25%), Postives = 153/221 (69.23%), Query Frame = 1 Query: 1 MGEAIYLDTILVPLSLFITIGYHTFLCYTIKNKPSRTTFGIDKSRRTTWGLNLNQGNDQKAMLSVQSLRNXXXXXXXXXXXXXXVXXXXXXXXXXXXXXSHLFSSGIFGSKSDKIFLLKYGXXXXXXXXXXXXXXMAIGFLIDANFLMNAYGECLNGGYTQSILEKGFTLAFVGNRVFCVAIPLMLWMLGPXXXXXXXXXXXXXXHEFDFVPKFPHSHKQC 663 MGE IYLDTILVPLSLFITI YH FLCYTIKNKPSRTT+GIDK RRTTWGLN+NQG+D+KAML VQ++RN V SHLFSSG FGSKSD IFLLKY MAIGFLIDANFLMNAYG+ L+GGYTQS+LEKGFTLAFVGNRVFCVAIPLMLWMLGP HEFD+VPKFP K+C Sbjct: 1 MGEGIYLDTILVPLSLFITIVYHAFLCYTIKNKPSRTTYGIDKLRRTTWGLNVNQGDDKKAMLCVQTMRNTLMTTILTATITILVNMALAALNNNAFNASHLFSSGFFGSKSDTIFLLKYASASICLLISFLCSSMAIGFLIDANFLMNAYGDFLSGGYTQSVLEKGFTLAFVGNRVFCVAIPLMLWMLGPVLVFLASIALVCLLHEFDYVPKFPQGQKRC 221
BLAST of Ca_09494 vs. TrEMBL
Match: C6T4M8_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 1.228e-68 Identity = 135/223 (60.54%), Postives = 151/223 (67.71%), Query Frame = 1 Query: 1 MGEAIYLDTILVPLSLFITIGYHTFLCYTIKNKPSRTTFGIDKSRRTTWGLNLNQGNDQKAMLSVQSLRNXXXXXXXXXXXXXXVXXXXXXXXXXXXXXSHLFSSGIFGSKSDKIFLLKYGXXXXXXXXXXXXXXMAIGFLIDANFLMNAYGECLNGGYTQSILEKGFTLAFVGNRVFCVAIPLMLWMLGPXXXXXXXXXXXXXXHEFDFVPKFPHSHKQCNI 669 MG A+YLDTI VPLSLFIT+GYH +LC+TIKNKPSRTT+GI K RRT W LNLNQG+ KAML+VQSLRN + SHLFSSG FGSKSDKIF+LKYG MAIG+LIDANFLMNAYGE L+GGYTQ+ILE+GFTLA VGNRV CVA+PLMLWMLGP HEFDFV KFP ++KQC I Sbjct: 1 MGVAVYLDTIFVPLSLFITVGYHVYLCHTIKNKPSRTTYGISKKRRTDWSLNLNQGDASKAMLTVQSLRNTLMSTILTATITILINLGLAALTNNTYNASHLFSSGFFGSKSDKIFVLKYGSASICLVMSFMFSSMAIGYLIDANFLMNAYGEFLSGGYTQTILERGFTLALVGNRVLCVAVPLMLWMLGPVLVLLATLVLVFVLHEFDFVCKFPDNNKQCII 223
BLAST of Ca_09494 vs. TrEMBL
Match: I1N382_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 6.739e-67 Identity = 134/225 (59.56%), Postives = 149/225 (66.22%), Query Frame = 1 Query: 1 MGEAIYLDTILVPLSLFITIGYHTFLCYTIKNKPSRTTFGIDKSRRTTWGLNLNQGNDQKAMLSVQSLRNXXXXXXXXXXXXXXVXXXXXXXXXXXXXXSHLFSSGIFGSKSDKIFLLKYGXXXXXXXXXXXXXXMAIGFLIDANFLMNAYGECLNGGYTQSILEKGFTLAFVGNRVFCVAIPLMLWMLGPXXXXXXXXXXXXXXHEFDFVPKFPHSHKQCNIGK 675 MG A YLDTI+VPLSLFIT+GYH +LC+TIKNKPSRTT+GI K RRT W LNLNQG+ KAML+VQSLRN V SHLFSS FGSKSDKIF+LKYG MAIG+LIDANFLMNAYGE L+GGYTQ+ILE+GFTLA VGNRV CVA+PLMLWMLGP HEFDFV KFP ++K C K Sbjct: 1 MGVAFYLDTIVVPLSLFITVGYHAYLCHTIKNKPSRTTYGISKHRRTDWSLNLNQGDASKAMLTVQSLRNTLMSTILTATITILVNLGLAALTNNTYNASHLFSSEFFGSKSDKIFVLKYGSASICLVMSFMFSSMAIGYLIDANFLMNAYGEFLSGGYTQTILERGFTLALVGNRVLCVAVPLMLWMLGPVLVLLASLVLVFVLHEFDFVCKFPDNNKHCTTVK 225
BLAST of Ca_09494 vs. TrEMBL
Match: I3SKX7_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 1.961e-66 Identity = 130/219 (59.36%), Postives = 149/219 (68.04%), Query Frame = 1 Query: 1 MGEAIYLDTILVPLSLFITIGYHTFLCYTIKNKPSRTTFGIDKSRRTTWGLNLNQGNDQKAMLSVQSLRNXXXXXXXXXXXXXXVXXXXXXXXXXXXXXSHLFSSGIFGSKSDKIFLLKYGXXXXXXXXXXXXXXMAIGFLIDANFLMNAYGECLNGGYTQSILEKGFTLAFVGNRVFCVAIPLMLWMLGPXXXXXXXXXXXXXXHEFDFVPKFPHSHK 657 MG A+YLD ILVPLSLFITIGYH +LC+ IKNKPSRTT+GID+ RRT WG NLNQG D+KAML+VQSLRN V SHLF+S FGSKSDK+F+LKYG MAIGFLID+N+LMNAYGE L+GGYTQ+ILE+GFTLA VGNR+ CVA+PLMLWMLGP EFDFVP+FPHS+K Sbjct: 1 MGVAVYLDIILVPLSLFITIGYHVYLCHAIKNKPSRTTYGIDRLRRTAWGENLNQGEDKKAMLTVQSLRNTLMTTILTATITILVNLALAALTNNTYKASHLFNSEFFGSKSDKVFVLKYGSASFCLLFSFLCSSMAIGFLIDSNYLMNAYGEFLSGGYTQNILERGFTLALVGNRMLCVAVPLMLWMLGPFAAFLASLALVWVLREFDFVPQFPHSNK 219
BLAST of Ca_09494 vs. TrEMBL
Match: I3STU0_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.215e-51 Identity = 79/119 (66.39%), Postives = 84/119 (70.59%), Query Frame = 1 Query: 307 FSSGIFGSKSDKIFLLKYGXXXXXXXXXXXXXXMAIGFLIDANFLMNAYGECLNGGYTQSILEKGFTLAFVGNRVFCVAIPLMLWMLGPXXXXXXXXXXXXXXHEFDFVPKFPHSHKQC 663 FSSG FGSKSD IFLLKY MAIGFLIDANFLMNAYG+ L+GGYTQS+LEKGFTLAFVGNRVFCVAIPLMLWMLGP HEFD+VPKFP K+C Sbjct: 40 FSSGFFGSKSDTIFLLKYASASICLLISFLCSSMAIGFLIDANFLMNAYGDFLSGGYTQSVLEKGFTLAFVGNRVFCVAIPLMLWMLGPVLVFLASIALVCLLHEFDYVPKFPQGQKRC 158 HSP 2 Score: 70.8626 bits (172), Expect = 1.215e-51 Identity = 31/39 (79.49%), Postives = 32/39 (82.05%), Query Frame = 3 Query: 192 CTKLEEHSYGHNTHSYNNNSSKHGFGSSKQQCIQC*PSF 308 CT EEH+Y HNTHS NNS KHGFGSSKQQCIQC PSF Sbjct: 2 CTNHEEHTYDHNTHSNYNNSCKHGFGSSKQQCIQCKPSF 40
BLAST of Ca_09494 vs. TrEMBL
Match: M5W4W9_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa018775mg PE=4 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 2.851e-41 Identity = 92/193 (47.67%), Postives = 114/193 (59.07%), Query Frame = 1 Query: 1 MGEAIYLDTILVPLSLFITIGYHTFLCYTIKNKPSRTTFGIDKSRRTTWGLNLNQGNDQKAMLSVQSLRNXXXXXXXXXXXXXXVXXXXXXXXXXXXXXSHLFSSGIFGSKSDKIFLLKYGXXXXXXXXXXXXXXMAIGFLIDANFLMNAYG--ECLNGGYTQSILEKGFTLAFVGNRVFCVAIPLMLWMLGP 573 MG +YLDTILVPLSLF+T+GYH +L + KNKPS TT GI+ +R W L LN G+D+K ML+VQSLRN + +HLFS FGS+S IF LKYG MAIGFLIDANFL+NA G E + G ++I EKGF LAFV +R+ C+ ++LWMLGP Sbjct: 1 MGVVVYLDTILVPLSLFVTVGYHAYLWHNFKNKPSHTTIGINMLKRRAWFLELNGGDDKKGMLAVQSLRNTLMGTTLTASIAILIEVSLAAFINNSYSATHLFSHAFFGSQSTMIFALKYGSAALSLAVSFLCSSMAIGFLIDANFLINASGDHEFTSSGNIRTIFEKGFILAFVSSRMLCITFLMLLWMLGP 193
BLAST of Ca_09494 vs. TrEMBL
Match: K4D1T7_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc10g074950.1 PE=4 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 2.413e-40 Identity = 89/187 (47.59%), Postives = 117/187 (62.57%), Query Frame = 1 Query: 16 YLDTILVPLSLFITIGYHTFLCYTIKNKPSRTTFGIDKSRRTTWGLNLNQGNDQKAMLSVQSLRNXXXXXXXXXXXXXXVXXXXXXXXXXXXXXSHLFSSGIFGSKSDKIFLLKYGXXXXXXXXXXXXXXMAIGFLIDANFLMNAYGE-CLNGGYTQSILEKGFTLAFVGNRVFCVAIPLMLWMLGP 573 YLDTILVPLSLFITIGYH +L + +K+KPS TT G++ +R +W LNQG+++K L+VQSLRN + S+LF+S FGS++ K +LKYG MA+GFLIDANFL+NA GE +N +T++I E+GFTLAFVG+RV C+ PL+ WMLGP Sbjct: 8 YLDTILVPLSLFITIGYHLYLWHHLKHKPSHTTIGMNMLKRRSWLRELNQGSEKKGTLAVQSLRNALMETILTATITILITLAVAALTNNTLKVSNLFTSAFFGSQTGKTIVLKYGSATIFLVASFLCSSMALGFLIDANFLVNALGEFSINPTHTETIFERGFTLAFVGDRVLCMTFPLLFWMLGP 194
BLAST of Ca_09494 vs. TrEMBL
Match: M1D362_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400031231 PE=4 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 5.377e-40 Identity = 88/187 (47.06%), Postives = 116/187 (62.03%), Query Frame = 1 Query: 16 YLDTILVPLSLFITIGYHTFLCYTIKNKPSRTTFGIDKSRRTTWGLNLNQGNDQKAMLSVQSLRNXXXXXXXXXXXXXXVXXXXXXXXXXXXXXSHLFSSGIFGSKSDKIFLLKYGXXXXXXXXXXXXXXMAIGFLIDANFLMNAYGE-CLNGGYTQSILEKGFTLAFVGNRVFCVAIPLMLWMLGP 573 YLDTILVPLSLFITIGYH +L + +K+KPS TT G++ +R +W LNQG+++K L+VQSLRN + S+LF+S FGS++ K +LKYG MA+GFLIDANFL+NA GE +N +T++I E+GFTLAFVG+RV C+ PL+ WM GP Sbjct: 8 YLDTILVPLSLFITIGYHAYLWHYLKHKPSHTTIGMNMLKRRSWLRELNQGSEKKGTLAVQSLRNALMETILTATITILITLAMAALTNNTLKVSNLFTSAFFGSQTGKTIVLKYGSATIFLVASFLCSSMALGFLIDANFLVNALGEFSINPRHTETIFERGFTLAFVGDRVLCMTFPLLFWMFGP 194
BLAST of Ca_09494 vs. TrEMBL
Match: M5WLI5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019067mg PE=4 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.239e-36 Identity = 88/217 (40.55%), Postives = 114/217 (52.53%), Query Frame = 1 Query: 13 IYLDTILVPLSLFITIGYHTFLCYTIKNKPSRTTFGIDKSRRTTWGLNLNQGNDQKAMLSVQSLRNXXXXXXXXXXXXXXVXXXXXXXXXXXXXXSHLF-SSGIFGSKSDKIFLLKYGXXXXXXXXXXXXXXMAIGFLIDANFLMNAYGECLNGGYTQSILEKGFTLAFVGNRVFCVAIPLMLWMLGPXXXXXXXXXXXXXXHEFDFVPKFPHSHKQ 660 +YLDTILV LSLF+ I YH +L +T K KPS TT GID RR TW L + + + KAML+VQSLRN SHL S +FGS+S ++F LKYG MA F ID FL+NA E + G TQ++ E+G+ LA +G+R+ C++ PLMLW+ GP E DFV KF S++Q Sbjct: 5 VYLDTILVTLSLFLLISYHAYLWHTFKTKPSHTTIGIDSIRRRTWFLEIKESDGLKAMLAVQSLRNTQMVAIFTASIAIAFSLALAALTNNAYNASHLLIESPLFGSQSGRMFALKYGFASVILLFSSLCSSMATVFFIDTIFLINASAEFSSSGITQTLFERGYMLALIGHRLLCISFPLMLWLFGPVPVALSSLALVWWLSELDFVGKFNKSNRQ 221
BLAST of Ca_09494 vs. TrEMBL
Match: B9IGU4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_825418 PE=4 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 8.883e-35 Identity = 85/216 (39.35%), Postives = 112/216 (51.85%), Query Frame = 1 Query: 1 MGEAIYLDTILVPLSLFITIGYHTFLCYTIKNKPSRTTFGIDKSRRTTWGLNLNQGNDQKAMLSVQSLRNXXXXXXXXXXXXXXVXXXXXXXXXXXXXXSHLFS-SGIFGSKSDKIFLLKYGXXXXXXXXXXXXXXMAIGFLIDANFLMNAYGECLNGG--YTQSILEKGFTLAFVGNRVFCVAIPLMLWMLGPXXXXXXXXXXXXXXHEFDFVPK 639 MG YLDTIL PLSLF+ +GYH +L + KNKPS+ T GI +R TW + L +G+++ ML+VQSLRN + SHL S S FGS+S K+++LK+G M + FLIDANFL+NA + YTQ++ E+GF LA +GNRV C+ PL+ WM GP H DF K Sbjct: 1 MGVIDYLDTILAPLSLFLMVGYHAYLWHCFKNKPSQITEGIAALKRKTWFVQLKEGDNRTGMLAVQSLRNAQMTTILTAATAIIINLALAALTNNNYKASHLLSGSAFFGSQSGKLYVLKFGSASLFLLVSFLCSSMGLAFLIDANFLINAASREFSPSPTYTQTVFERGFMLALMGNRVLCITFPLLAWMFGPVPVALSSVALVWVLHGLDFPGK 216 The following BLAST results are available for this feature:
BLAST of Ca_09494 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_09494 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_09494_v1.0_kabuli ID=Ca_09494_v1.0_kabuli; Name=Ca_09494; organism=Cicer arietinum; type=mRNA; length=678bpback to top protein sequence of Ca_09494_v1.0_kabuli >Ca_09494_v1.0_kabuli ID=Ca_09494_v1.0_kabuli; Name=Ca_09494_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=225bpback to top mRNA from alignment at Ca3:21334539..21336240+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_09494_v1.0_kabuli ID=Ca_09494_v1.0_kabuli; Name=Ca_09494; organism=Cicer arietinum; type=mRNA; length=1702bp; location=Sequence derived from: Ca3:21334539..21336240+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca3:21334539..21336240+ >Ca_09494_v1.0_kabuli ID=Ca_09494_v1.0_kabuli; Name=Ca_09494; organism=Cicer arietinum; type=CDS; length=678bp; location=Sequence derived from: Ca3:21334539..21336240+ (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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