Ca_03754, Ca_03754_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_03754
Unique NameCa_03754_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length408
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca4chromosomeCa4:5016151..5017266 -Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR253Pisum sativum Cameor genome v1aPisum sativum
capsR277Pisum sativum Cameor genome v1aPisum sativum
capsR300Pisum sativum Cameor genome v1aPisum sativum
cavuR298Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR318Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR360Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR385Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0475Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0507Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0697Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0827Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1121Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL277Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL278Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR247Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR279Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR289Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR309Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR286Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
catifR345Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR353Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR307Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR349Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR355Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR262Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR361Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR332Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR380Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR394Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR280Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR282Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR125Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR131Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL136Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL377Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR278Cicer arietinum
cacarR286Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.5g185240.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
LR48_mrnaVigan10g153000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Psat06G0394300-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-TanjilR_15537Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_014662347.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-TanjilR_31708Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-KK1_011071Cajanus cajan Asha genome v1.0Cajanus cajan
jg30860.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.3g068640.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigun06g112800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Psat3g007120.1Pisum sativum Cameor genome v1aPisum sativum
Vfaba.Tiffany.R1.5g145560.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vfaba.Hedin2.R1.3g082320.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Psat03G0032800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-TanjilR_10123Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
jg3118.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Va09G047680.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
evm.model.Chr06.1238Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Phvul.006G101800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004495744.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_004494642.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_03754-CDS1Ca_03754-CDS1Cicer arietinumCDS
Ca_03754-CDS2Ca_03754-CDS2Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_03754_v1.0_kabuliCa_03754_v1.0_kabuliCicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_03754 vs. SwissProt
Match: TATA_PEA (Sec-independent protein translocase protein TATA, chloroplastic OS=Pisum sativum GN=TATA PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 3.018e-42
Identity = 88/105 (83.81%), Postives = 97/105 (92.38%), Query Frame = 1 
Query:   88 NYNTS-VVLKKARISSRRTKGFTCKAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEEIPVTSDQEEQDIKVSSTKED 399
            N NTS ++LKKARI +R TKGFTC AFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIG+TVKSFQQAAKEFETELKKEPN TEEI V S+QE+Q+IKVSSTK++
Sbjct:   32 NSNTSSLLLKKARIKTRTTKGFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKEPNPTEEISVASEQEKQEIKVSSTKDN 136
[Close]
BLAST of Ca_03754 vs. SwissProt
Match: TATA_MAIZE (Sec-independent protein translocase protein TATA, chloroplastic OS=Zea mays GN=TATA PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.961e-26
Identity = 64/107 (59.81%), Postives = 73/107 (68.22%), Query Frame = 1 
Query:  100 SVVLKKARISSRRTKGFTCKAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEEIP------VTSDQEEQDIKVSSTKEDS 402
            SV  +  R  S       CK  FGLGVPEL VIAGVAALVFGPK+LPE+GRSIGKTVKSFQQAAKEFETELKKEP    + P        S  EE+ ++ SS+KE +
Sbjct:   64 SVAARPRRAGSGGGGALGCKCLFGLGVPELAVIAGVAALVFGPKQLPEIGRSIGKTVKSFQQAAKEFETELKKEPGEGGDQPPPATPTAVSGGEEKGLEASSSKESA 170
[Close]
BLAST of Ca_03754 vs. SwissProt
Match: TATA_ORYSJ (Sec-independent protein translocase protein TATA, chloroplastic OS=Oryza sativa subsp. japonica GN=TATA PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 5.173e-26
Identity = 63/98 (64.29%), Postives = 72/98 (73.47%), Query Frame = 1 
Query:  130 SRRTKGFTCKAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKE-------PNSTEEIPVTSDQEEQDIKVSSTKEDS 402
            SR      CK  FGLGVPELVVIAGVAALVFGPK+LPE+GRSIGKTVKSFQQAAKEFETELKKE       P    E  V+   EE++++ SS+KE +
Sbjct:   73 SRGGGAMGCKCLFGLGVPELVVIAGVAALVFGPKQLPEIGRSIGKTVKSFQQAAKEFETELKKESDDGGDQPPPPTETAVSDGGEEKELEASSSKEST 170
[Close]
BLAST of Ca_03754 vs. SwissProt
Match: TATA_ARATH (Sec-independent protein translocase protein TATA, chloroplastic OS=Arabidopsis thaliana GN=TATA PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.353e-25
Identity = 61/106 (57.55%), Postives = 78/106 (73.58%), Query Frame = 1 
Query:  100 SVVLKKARISSRRT-KGFTCKAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPN----STEEIPVTSDQEEQDIKVSSTKEDS 402
            S+V    RI    T K  TC A FGLGVPEL VIAGVAAL+FGPKKLPE+G+SIGKTVKSFQQAAKEFE+ELK EP      + ++  ++ +EE+  +VSS+ +++
Sbjct:   41 SLVAIGRRIRQEPTRKPLTCNALFGLGVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFESELKTEPEESVAESSQVATSNKEEEKKTEVSSSSKEN 146
[Close]
BLAST of Ca_03754 vs. SwissProt
Match: TATA_SYNP6 (Sec-independent protein translocase protein TatA OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=tatA PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.853e-16
Identity = 36/67 (53.73%), Postives = 52/67 (77.61%), Query Frame = 1 
Query:  163 FFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEEIPVTSDQE 363
            FFG+G+PE++VI  +A LVFGPKKLPE+GRS+GK ++ FQ A++EFE+E+K+E + T   P  +  E
Sbjct:    3 FFGIGLPEMLVILAIALLVFGPKKLPEIGRSLGKALRGFQDASREFESEIKREIDRTPATPAEATVE 69
[Close]
BLAST of Ca_03754 vs. SwissProt
Match: TATA_SYNE7 (Sec-independent protein translocase protein TatA OS=Synechococcus elongatus (strain PCC 7942) GN=tatA PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.853e-16
Identity = 36/67 (53.73%), Postives = 52/67 (77.61%), Query Frame = 1 
Query:  163 FFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEEIPVTSDQE 363
            FFG+G+PE++VI  +A LVFGPKKLPE+GRS+GK ++ FQ A++EFE+E+K+E + T   P  +  E
Sbjct:    3 FFGIGLPEMLVILAIALLVFGPKKLPEIGRSLGKALRGFQDASREFESEIKREIDRTPATPAEATVE 69
[Close]
BLAST of Ca_03754 vs. SwissProt
Match: TATA_THEEB (Sec-independent protein translocase protein TatA OS=Thermosynechococcus elongatus (strain BP-1) GN=tatA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 7.007e-15
Identity = 35/73 (47.95%), Postives = 55/73 (75.34%), Query Frame = 1 
Query:  166 FGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEEIPVTSDQEEQDIKVS 384
            FG+G+PEL+VI  VA L+FGPKKLPE+GRS+GKT ++F++A++EF+ E+K++  + EE      + E   ++S
Sbjct:    4 FGIGLPELIVILVVALLIFGPKKLPEIGRSLGKTKRAFEEASREFQDEIKRQTAALEEEQQAKAEAESPREIS 76
[Close]
BLAST of Ca_03754 vs. SwissProt
Match: TATA_TRIEI (Sec-independent protein translocase protein TatA OS=Trichodesmium erythraeum (strain IMS101) GN=tatA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.195e-14
Identity = 36/77 (46.75%), Postives = 55/77 (71.43%), Query Frame = 1 
Query:  166 FGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEE---IPVTSDQEEQDIKVSS 387
            FG+G+PE++VI  VA L+FGPKKLPE+GRS+G+ + SF+  A++FE E K+E    EE   +  ++ + E+ + VSS
Sbjct:    4 FGIGLPEMIVILVVALLIFGPKKLPEIGRSLGQAINSFKAGARDFENEFKREAKHLEEGVKVSTSASEPEKVVDVSS 80
[Close]
BLAST of Ca_03754 vs. SwissProt
Match: TATA_PROM2 (Sec-independent protein translocase protein TatA OS=Prochlorococcus marinus (strain MIT 9215) GN=tatA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.566e-13
Identity = 35/79 (44.30%), Postives = 55/79 (69.62%), Query Frame = 1 
Query:  166 FGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEEIPVTSDQEEQDIKVSSTKEDS 402
            FG+G+PE+ VI  +A L+FGPKKLPE+G+ +GKT+KS ++A+ EF+ E+ +  N  +E P  S +  Q  +++  K DS
Sbjct:    4 FGVGLPEVTVILILALLIFGPKKLPELGKQLGKTLKSLKKASNEFQNEIDQVMNEEDESP-KSIESNQTNEINQEKIDS 81
[Close]
BLAST of Ca_03754 vs. SwissProt
Match: TATA_PROMS (Sec-independent protein translocase protein TatA OS=Prochlorococcus marinus (strain AS9601) GN=tatA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 9.471e-12
Identity = 35/81 (43.21%), Postives = 56/81 (69.14%), Query Frame = 1 
Query:  166 FGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPN--STEEIPVTSDQEEQDIKVSSTKEDS 402
            FG+G+PE+ VI  +A L+FGPKKLPE+G+ +GKT+KS ++A+ EF+ E+ +  N    +E P+ S +  Q  +++  K DS
Sbjct:    4 FGVGLPEVTVILILALLIFGPKKLPELGKQLGKTLKSLKKASNEFQNEIDQVMNEQDKDESPI-SIESNQTNEINQEKIDS 83
[Close]
BLAST of Ca_03754 vs. TrEMBL
Match: B7FMF0_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 2.110e-40
Identity = 87/100 (87.00%), Postives = 93/100 (93.00%), Query Frame = 1 
Query:   97 TSVVLKKARISSRRTKGFTCKAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEEIPVTSDQEEQDIKVSSTKE 396
            TS++LKKAR  +R TK FTC AFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEEI VT+DQE+QD KVSSTK+
Sbjct:   38 TSLLLKKARTRTRSTKRFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEEISVTNDQEDQDNKVSSTKD 137
[Close]
BLAST of Ca_03754 vs. TrEMBL
Match: I1NIQ4_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 4.711e-32
Identity = 72/106 (67.92%), Postives = 85/106 (80.19%), Query Frame = 1 
Query:  100 SVVLKKARISSRRTKGFTCKAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEEIP-------VTSDQEEQDIKVSSTKE 396
            S++ +KARIS+RR+K  TC A FGLGVPELVVIAGVA L FGPK  P+VGRSIGKT+KSFQQAAKEFE+E+KKEP+STEE P         S+QEEQ+ KVS TK+
Sbjct:   35 SILSRKARISTRRSKALTCNALFGLGVPELVVIAGVAVLAFGPKNFPQVGRSIGKTIKSFQQAAKEFESEIKKEPDSTEENPAAAEKSIAVSEQEEQETKVSGTKD 140
[Close]
BLAST of Ca_03754 vs. TrEMBL
Match: K7N519_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.585e-30
Identity = 69/102 (67.65%), Postives = 82/102 (80.39%), Query Frame = 1 
Query:  100 SVVLKKARISSRRTKGFTCKAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEEIP-------VTSDQEEQDIKVS 384
            S++ +KARIS+RR+K  TC A FGLGVPELVVIAGVA L FGPK  P+VGRSIGKT+KSFQQAAKEFE+E+KKEP+STEE P         S+QEEQ+ K+S
Sbjct:   35 SILSRKARISTRRSKALTCNALFGLGVPELVVIAGVAVLAFGPKNFPQVGRSIGKTIKSFQQAAKEFESEIKKEPDSTEENPAAAEKSIAVSEQEEQETKLS 136
[Close]
BLAST of Ca_03754 vs. TrEMBL
Match: B9SZ75_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0484630 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 3.376e-30
Identity = 74/107 (69.16%), Postives = 86/107 (80.37%), Query Frame = 1 
Query:   94 NTSVVLKKARISSRRT-KGFTCKAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEEIP-----VTSDQEEQDIKVSSTKE 396
            N ++VL K R  + RT KG TC A FGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQ+AAKEFE+ELKKEP+S  E P       S++++QD +VSS+KE
Sbjct:   41 NKTLVLGKTRSRTERTRKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQEAAKEFESELKKEPDSALESPGETPTAISEEKKQDAEVSSSKE 147
[Close]
BLAST of Ca_03754 vs. TrEMBL
Match: K7LJR9_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 5.759e-30
Identity = 69/105 (65.71%), Postives = 83/105 (79.05%), Query Frame = 1 
Query:   94 NTSVVLKKARISSRRTKGFTCKAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEEIP-------VTSDQEEQDIKVSS 387
            N++   +KARIS+RR+K  TC A FGLG+PEL VIAGVAAL FGPK LP+VGRS+GKT+KSFQQAAKEFE+E+KKEP+STEE P         S QEEQ+ KVS+
Sbjct:   28 NSNANSRKARISTRRSKALTCNALFGLGLPELAVIAGVAALAFGPKNLPQVGRSLGKTIKSFQQAAKEFESEIKKEPDSTEENPTAAEKPIAASKQEEQETKVST 132
[Close]
BLAST of Ca_03754 vs. TrEMBL
Match: A9PB96_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_571038 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 9.823e-30
Identity = 72/108 (66.67%), Postives = 83/108 (76.85%), Query Frame = 1 
Query:   94 NTSVVLKKARISSRRTKGFTCKAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEEIP-----VTSDQEEQDIKVSSTKEDS 402
            N+ V+ K    S R  KG TC A FGLGVPELVVIAGVAALVFGPKKLPEVG+SIGKTV+SFQQAAKEFE+ELKKEP S  E P        ++++QD++VSSTKE S
Sbjct:   42 NSLVLGKTTSGSQRAKKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVRSFQQAAKEFESELKKEPESEPETPGEQPKAIIEEKKQDVEVSSTKEKS 149
[Close]
BLAST of Ca_03754 vs. TrEMBL
Match: M5WDC7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012899mg PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.676e-29
Identity = 70/105 (66.67%), Postives = 86/105 (81.90%), Query Frame = 1 
Query:  100 SVVLKKARISSRRT---KGFTCKAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEEIP-VTSDQEEQDIKVSSTKEDS 402
            ++VL + R  +R     KG TC A FGLG+PELVVIAGVAALVFGPKKLPEVG+SIGKTVKSFQQAAKEFETELKKEP +  E P   S++E+Q++KVSS++E++
Sbjct:   46 ALVLGRTRTRTRTERVKKGLTCNALFGLGMPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFETELKKEPEALTETPTAVSEEEKQEVKVSSSQENA 150
[Close]
BLAST of Ca_03754 vs. TrEMBL
Match: D7TUI4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0030g02220 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.676e-29
Identity = 71/104 (68.27%), Postives = 82/104 (78.85%), Query Frame = 1 
Query:  100 SVVLKKARISSRRTKGFTCKAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEEIPV-----TSDQEEQDIKVSSTKE 396
            ++V+ ++R   R  K  TC   FGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEP S  E PV      S+++E+D++VSS KE
Sbjct:   31 TLVVARSRTRIRTQKRLTCTCLFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPASVTEAPVETPATLSEEKEKDVEVSSKKE 134
[Close]
BLAST of Ca_03754 vs. TrEMBL
Match: A9P9F0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_742022 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.188e-29
Identity = 70/108 (64.81%), Postives = 84/108 (77.78%), Query Frame = 1 
Query:   88 NYNTSVVLKKARISSRRTKGFTCKAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEEIP-----VTSDQEEQDIKVSSTKE 396
            +YN+ V+ K    S R  KG TC A FGLGVPELVVIAGVA L+FGPK+LPEVGRSIGKTVKSFQQAAKEFE+ELKKEP+ST + P       S++++ D +VSS+KE
Sbjct:   39 SYNSLVLGKTRSRSQRAKKGLTCNALFGLGVPELVVIAGVATLLFGPKQLPEVGRSIGKTVKSFQQAAKEFESELKKEPDSTSDTPGEQPTTISEEKKHDSEVSSSKE 146
[Close]
BLAST of Ca_03754 vs. TrEMBL
Match: C6SZ58_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 4.875e-29
Identity = 72/109 (66.06%), Postives = 85/109 (77.98%), Query Frame = 1 
Query:   91 YNTSVVLKKARISSR-RTKGFTCKAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTE------EIPVTSDQEEQDIKVSSTKE 396
            +N+  V     ++ R R KG +C A FGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFE+ELKKEP+STE       I V+  Q++QD +VS++KE
Sbjct:   32 FNSVSVRVAVNVNGRGRNKGLSCNAMFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFESELKKEPDSTEGDSSEKSIVVSEKQQQQDNEVSTSKE 140
[Close]
BLAST of Ca_03754 vs. DB:Swiss
Match: TATA_PEA (Sec-independent protein translocase protein TATA, chloroplastic OS=Pisum sativum OX=3888 GN=TATA PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 4.605e-53
Identity = 83/96 (86.46%), Postives = 90/96 (93.75%), Query Frame = 1 
Query:  112 KKARISSRRTKGFTCKAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEEIPVTSDQEEQDIKVSSTKED 399
            KKARI +R TKGFTC AFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIG+TVKSFQQAAKEFETELKKEPN TEEI V S+QE+Q+IKVSSTK++
Sbjct:   41 KKARIKTRTTKGFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKEPNPTEEISVASEQEKQEIKVSSTKDN 136
[Close]
BLAST of Ca_03754 vs. DB:Swiss
Match: TATA_MAIZE (Sec-independent protein translocase protein TATA, chloroplastic OS=Zea mays OX=4577 GN=TATA PE=1 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 6.521e-33
Identity = 60/89 (67.42%), Postives = 68/89 (76.40%), Query Frame = 1 
Query:  154 CKAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEEIP------VTSDQEEQDIKVSSTKEDS 402
            CK  FGLGVPEL VIAGVAALVFGPK+LPE+GRSIGKTVKSFQQAAKEFETELKKEP    + P        S  EE+ ++ SS+KE +
Sbjct:   82 CKCLFGLGVPELAVIAGVAALVFGPKQLPEIGRSIGKTVKSFQQAAKEFETELKKEPGEGGDQPPPATPTAVSGGEEKGLEASSSKESA 170
[Close]
BLAST of Ca_03754 vs. DB:Swiss
Match: TATA_ORYSJ (Sec-independent protein translocase protein TATA, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TATA PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.473e-32
Identity = 61/90 (67.78%), Postives = 70/90 (77.78%), Query Frame = 1 
Query:  154 CKAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKE-------PNSTEEIPVTSDQEEQDIKVSSTKEDS 402
            CK  FGLGVPELVVIAGVAALVFGPK+LPE+GRSIGKTVKSFQQAAKEFETELKKE       P    E  V+   EE++++ SS+KE +
Sbjct:   81 CKCLFGLGVPELVVIAGVAALVFGPKQLPEIGRSIGKTVKSFQQAAKEFETELKKESDDGGDQPPPPTETAVSDGGEEKELEASSSKEST 170
[Close]
BLAST of Ca_03754 vs. DB:Swiss
Match: TATA_ARATH (Sec-independent protein translocase protein TATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TATA PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.845e-32
Identity = 56/91 (61.54%), Postives = 72/91 (79.12%), Query Frame = 1 
Query:  142 KGFTCKAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPN----STEEIPVTSDQEEQDIKVSSTKEDS 402
            K  TC A FGLGVPEL VIAGVAAL+FGPKKLPE+G+SIGKTVKSFQQAAKEFE+ELK EP      + ++  ++ +EE+  +VSS+ +++
Sbjct:   56 KPLTCNALFGLGVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFESELKTEPEESVAESSQVATSNKEEEKKTEVSSSSKEN 146
[Close]
BLAST of Ca_03754 vs. DB:Swiss
Match: TATA_SYNP6 (Sec-independent protein translocase protein TatA OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=tatA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.578e-20
Identity = 35/61 (57.38%), Postives = 50/61 (81.97%), Query Frame = 1 
Query:  163 FFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEEIP 345
            FFG+G+PE++VI  +A LVFGPKKLPE+GRS+GK ++ FQ A++EFE+E+K+E + T   P
Sbjct:    3 FFGIGLPEMLVILAIALLVFGPKKLPEIGRSLGKALRGFQDASREFESEIKREIDRTPATP 63
[Close]
BLAST of Ca_03754 vs. DB:Swiss
Match: TATA_SYNE7 (Sec-independent protein translocase protein TatA OS=Synechococcus elongatus (strain PCC 7942) OX=1140 GN=tatA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.578e-20
Identity = 35/61 (57.38%), Postives = 50/61 (81.97%), Query Frame = 1 
Query:  163 FFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEEIP 345
            FFG+G+PE++VI  +A LVFGPKKLPE+GRS+GK ++ FQ A++EFE+E+K+E + T   P
Sbjct:    3 FFGIGLPEMLVILAIALLVFGPKKLPEIGRSLGKALRGFQDASREFESEIKREIDRTPATP 63
[Close]
BLAST of Ca_03754 vs. DB:Swiss
Match: TATA_TRIEI (Sec-independent protein translocase protein TatA OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=tatA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.838e-19
Identity = 36/77 (46.75%), Postives = 55/77 (71.43%), Query Frame = 1 
Query:  166 FGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEE---IPVTSDQEEQDIKVSS 387
            FG+G+PE++VI  VA L+FGPKKLPE+GRS+G+ + SF+  A++FE E K+E    EE   +  ++ + E+ + VSS
Sbjct:    4 FGIGLPEMIVILVVALLIFGPKKLPEIGRSLGQAINSFKAGARDFENEFKREAKHLEEGVKVSTSASEPEKVVDVSS 80
[Close]
BLAST of Ca_03754 vs. DB:Swiss
Match: TATA_THEEB (Sec-independent protein translocase protein TatA OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=tatA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.351e-18
Identity = 33/58 (56.90%), Postives = 50/58 (86.21%), Query Frame = 1 
Query:  166 FGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEE 339
            FG+G+PEL+VI  VA L+FGPKKLPE+GRS+GKT ++F++A++EF+ E+K++  + EE
Sbjct:    4 FGIGLPELIVILVVALLIFGPKKLPEIGRSLGKTKRAFEEASREFQDEIKRQTAALEE 61
[Close]
BLAST of Ca_03754 vs. DB:Swiss
Match: TATA_PROM2 (Sec-independent protein translocase protein TatA OS=Prochlorococcus marinus (strain MIT 9215) OX=93060 GN=tatA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.144e-15
Identity = 30/61 (49.18%), Postives = 46/61 (75.41%), Query Frame = 1 
Query:  163 FFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEEIP 345
             FG+G+PE+ VI  +A L+FGPKKLPE+G+ +GKT+KS ++A+ EF+ E+ +  N  +E P
Sbjct:    3 IFGVGLPEVTVILILALLIFGPKKLPELGKQLGKTLKSLKKASNEFQNEIDQVMNEEDESP 63
[Close]
BLAST of Ca_03754 vs. DB:Swiss
Match: TATA_PROMS (Sec-independent protein translocase protein TatA OS=Prochlorococcus marinus (strain AS9601) OX=146891 GN=tatA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.154e-14
Identity = 32/77 (41.56%), Postives = 51/77 (66.23%), Query Frame = 1 
Query:  163 FFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEEIPVTSDQEEQDIKVSSTK 393
             FG+G+PE+ VI  +A L+FGPKKLPE+G+ +GKT+KS ++A+ EF+ E+ +  N         D++E  I + S +
Sbjct:    3 IFGVGLPEVTVILILALLIFGPKKLPELGKQLGKTLKSLKKASNEFQNEIDQVMNE-------QDKDESPISIESNQ 72
The following BLAST results are available for this feature:
BLAST of Ca_03754 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
TATA_PEA3.018e-4283.81Sec-independent protein translocase protein TATA, ... [more]
TATA_MAIZE3.961e-2659.81Sec-independent protein translocase protein TATA, ... [more]
TATA_ORYSJ5.173e-2664.29Sec-independent protein translocase protein TATA, ... [more]
TATA_ARATH3.353e-2557.55Sec-independent protein translocase protein TATA, ... [more]
TATA_SYNP64.853e-1653.73Sec-independent protein translocase protein TatA O... [more]
TATA_SYNE74.853e-1653.73Sec-independent protein translocase protein TatA O... [more]
TATA_THEEB7.007e-1547.95Sec-independent protein translocase protein TatA O... [more]
TATA_TRIEI1.195e-1446.75Sec-independent protein translocase protein TatA O... [more]
TATA_PROM28.566e-1344.30Sec-independent protein translocase protein TatA O... [more]
TATA_PROMS9.471e-1243.21Sec-independent protein translocase protein TatA O... [more]

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BLAST of Ca_03754 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
B7FMF0_MEDTR2.110e-4087.00Uncharacterized protein OS=Medicago truncatula PE=... [more]
I1NIQ4_SOYBN4.711e-3267.92Uncharacterized protein OS=Glycine max PE=3 SV=1[more]
K7N519_SOYBN2.585e-3067.65Uncharacterized protein OS=Glycine max PE=3 SV=1[more]
B9SZ75_RICCO3.376e-3069.16Putative uncharacterized protein OS=Ricinus commun... [more]
K7LJR9_SOYBN5.759e-3065.71Uncharacterized protein OS=Glycine max PE=3 SV=1[more]
A9PB96_POPTR9.823e-3066.67Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
M5WDC7_PRUPE1.676e-2966.67Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
D7TUI4_VITVI1.676e-2968.27Putative uncharacterized protein OS=Vitis vinifera... [more]
A9P9F0_POPTR2.188e-2964.81Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C6SZ58_SOYBN4.875e-2966.06Uncharacterized protein OS=Glycine max PE=2 SV=1[more]

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BLAST of Ca_03754 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
TATA_PEA4.605e-5386.46Sec-independent protein translocase protein TATA, ... [more]
TATA_MAIZE6.521e-3367.42Sec-independent protein translocase protein TATA, ... [more]
TATA_ORYSJ1.473e-3267.78Sec-independent protein translocase protein TATA, ... [more]
TATA_ARATH5.845e-3261.54Sec-independent protein translocase protein TATA, ... [more]
TATA_SYNP61.578e-2057.38Sec-independent protein translocase protein TatA O... [more]
TATA_SYNE71.578e-2057.38Sec-independent protein translocase protein TatA O... [more]
TATA_TRIEI4.838e-1946.75Sec-independent protein translocase protein TatA O... [more]
TATA_THEEB1.351e-1856.90Sec-independent protein translocase protein TatA O... [more]
TATA_PROM21.144e-1549.18Sec-independent protein translocase protein TatA O... [more]
TATA_PROMS1.154e-1441.56Sec-independent protein translocase protein TatA O... [more]
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InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003369Twin-arginine translocation protein TatA/B/EPFAMPF02416MttA_Hcf106coord: 58..107
score: 3.1
IPR003998Twin-arginine translocation protein TatB-likePRINTSPR01506TATBPROTEINcoord: 55..75
score: 3e-07coord: 75..94
score: 3e-07coord: 94..112
score: 3
IPR006312Twin-arginine translocation protein TatA/ETIGRFAMsTIGR01411tatAE: twin arginine-targeting protein translocasecoord: 57..103
score: 1.3
NoneNo IPR availableSEGsegsegcoord: 10..29
score
NoneNo IPR availableSEGsegsegcoord: 26..37
score
NoneNo IPR availableSEGsegsegcoord: 1..10
score
NoneNo IPR availableSEGsegsegcoord: 30..39
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_03754_v1.0_kabuli ID=Ca_03754_v1.0_kabuli; Name=Ca_03754; organism=Cicer arietinum; type=mRNA; length=408bp
ATGGAGGCAACACTTTCCCTTTGTTGTTCATCAGTAATTCGAAGGCTTCC
ACTCTCTTCCAGCTTATCCTTCTTAGCTTCGAAGTCTAATTACAATACAT
CAGTTGTGTTGAAGAAAGCCAGAATCAGCAGCAGAAGAACAAAGGGTTTC
ACCTGCAAGGCCTTCTTTGGACTTGGCGTGCCCGAACTTGTTGTCATTGC
AGGAGTTGCTGCCCTCGTTTTTGGTCCCAAGAAGTTGCCCGAAGTTGGTC
GCAGCATTGGCAAAACCGTCAAAAGCTTCCAACAGGCAGCAAAGGAGTTT
GAGACCGAGCTAAAAAAAGAACCTAATTCCACAGAAGAAATTCCTGTTAC
GAGTGACCAGGAGGAGCAAGACATTAAGGTTTCTAGTACAAAGGAAGATA
GTGCATGA
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protein sequence of Ca_03754_v1.0_kabuli

>Ca_03754_v1.0_kabuli ID=Ca_03754_v1.0_kabuli; Name=Ca_03754_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=135bp
MEATLSLCCSSVIRRLPLSSSLSFLASKSNYNTSVVLKKARISSRRTKGF
TCKAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEF
ETELKKEPNSTEEIPVTSDQEEQDIKVSSTKEDSA
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mRNA from alignment at Ca4:5016151..5017266-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_03754_v1.0_kabuli ID=Ca_03754_v1.0_kabuli; Name=Ca_03754; organism=Cicer arietinum; type=mRNA; length=1116bp; location=Sequence derived from: Ca4:5016151..5017266- (Cicer arietinum
ATGGAGGCAACACTTTCCCTTTGTTGTTCATCAGTAATTCGAAGGCTTCC
ACTCTCTTCCAGCTTATCCTTCTTAGCTTCGAAGTCTAATTACAATACAT
CAGTTGTGTTGAAGAAAGCCAGAATCAGCAGCAGAAGAACAAAGGGTTTC
ACCTGCAAGGCCTTCTTTGGACTTGGCGTGCCCGAACTTGTTGTCATTGC
AGGAGTTGCTGCCCTCGTTTTTGGTCCCAAGAAGTTGCCCGAAGTTGGTC
GCAGCATTGGCAAAACCGTCAAAAGCTTCCAACAGGTTCCATTTTTTTCT
CATTCATTTTCTTTTTAACTTTATTCAAATTCATAGCCACATATCCAATT
ACCGCTATTAGATTAGGTGGTTAATTAGTTTAACTCAAATACAAATCGAA
TTTAAACCCTAGTTGGAACAGCCAGATTGCCGCTCGGATAGATTAAGAAT
TTCATAAATTGTTTTCCAATACAAACTTATATTTTCTATAAAAATATATA
GCATGGTTGAAAATTATCTTACCGTCACACTTTATTTATCTTCTAGCAAA
ATTCTAAAATACCATCAAAAGAGGAAAATAATTATCTTCTCAGAGAGTTG
TTGCCTCAAAAACAATTATTTATAATATTTCACTAAAAAAAAAAGTTTTT
ATCTACGAAGCACATACTGACGGACACAGACACTTCGACACTCTTAATGT
AAAAAGTATAAGACACCAATGTCAAAAAACTAAATATGTTAGCAATTAAA
TTTCATATTTTTAATTCCCATCATTAGTCATAATCGTTTTTACATATCTT
TAACTCCTATAGTTGTGTTTGAGATGTGTCCAAGGGGTTTAGGGTGTGTG
GAAGTAGAGAAAAACAAGTCTTATTTTTGAAAGACTTATTTGAGGTGTCG
TATGGACGTCGGACGCACGCCGAATTCTAGAGTTGTCCGTAGTCTTTATT
GCATACTCGGTTATATATTTATTAGATTTTTGAAATCTTGTAGGCAGCAA
AGGAGTTTGAGACCGAGCTAAAAAAAGAACCTAATTCCACAGAAGAAATT
CCTGTTACGAGTGACCAGGAGGAGCAAGACATTAAGGTTTCTAGTACAAA
GGAAGATAGTGCATGA
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Coding sequence (CDS) from alignment at Ca4:5016151..5017266-

>Ca_03754_v1.0_kabuli ID=Ca_03754_v1.0_kabuli; Name=Ca_03754; organism=Cicer arietinum; type=CDS; length=408bp; location=Sequence derived from: Ca4:5016151..5017266- (Cicer arietinum
ATGGAGGCAACACTTTCCCTTTGTTGTTCATCAGTAATTCGAAGGCTTCC
ACTCTCTTCCAGCTTATCCTTCTTAGCTTCGAAGTCTAATTACAATACAT
CAGTTGTGTTGAAGAAAGCCAGAATCAGCAGCAGAAGAACAAAGGGTTTC
ACCTGCAAGGCCTTCTTTGGACTTGGCGTGCCCGAACTTGTTGTCATTGC
AGGAGTTGCTGCCCTCGTTTTTGGTCCCAAGAAGTTGCCCGAAGTTGGTC
GCAGCATTGGCAAAACCGTCAAAAGCTTCCAACAGGCAGCAAAGGAGTTT
GAGACCGAGCTAAAAAAAGAACCTAATTCCACAGAAGAAATTCCTGTTAC
GAGTGACCAGGAGGAGCAAGACATTAAGGTTTCTAGTACAAAGGAAGATA
GTGCATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: KEGG ORTHOLOGY
TermDefinition
K03116tatA; sec-independent protein translocase protein TatA
Vocabulary: INTERPRO
TermDefinition
IPR003369TatA/B/E
IPR003998TatB-like
IPR006312TatA/E
Vocabulary: Molecular Function
TermDefinition
GO:0008565obsolete protein transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0015031protein transport
GO:0009306protein secretion
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005886plasma membrane
GO:0016021integral component of membrane