Ca_03763, Ca_03763_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_03763
Unique NameCa_03763_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length576
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca4chromosomeCa4:4953366..4954060 -Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR253Pisum sativum Cameor genome v1aPisum sativum
capsR277Pisum sativum Cameor genome v1aPisum sativum
capsR300Pisum sativum Cameor genome v1aPisum sativum
cavuR298Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR318Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR360Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR385Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0475Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0507Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0697Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0827Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1121Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL278Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR247Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR279Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR289Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR309Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR286Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
catifR345Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR353Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR307Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR331Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR349Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR355Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR361Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR332Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR380Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR394Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR280Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR282Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR125Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR131Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL136Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL377Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR278Cicer arietinum
cacarR286Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Phvul.007G188400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-XM_014656626.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-TanjilR_15530Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Tiffany.R1.5g098720.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vfaba.Tiffany.R1.3g067840.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-KK1_007166Cajanus cajan Asha genome v1.0Cajanus cajan
Vfaba.Hedin2.R1.3g061480.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
jg1887.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.model.Chr07.1266Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Tiffany.R1.3g051040.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vfaba.Hedin2.R1.3g081040.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-TanjilR_10128Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun07g156200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Hedin2.R1.5g122600.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Va02G053650.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Psat6g144760.1Pisum sativum Cameor genome v1aPisum sativum
jg3097.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Psat06G0392000-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-NM_001309688.1Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_03763-CDS1Ca_03763-CDS1Cicer arietinumCDS
Ca_03763-CDS2Ca_03763-CDS2Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_03763_v1.0_kabuliCa_03763_v1.0_kabuliCicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_03763 vs. TrEMBL
Match: O65758_CICAR (Histone H1 OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 7.307e-30
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1 
Query:   58 LSHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHKDLSPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            LSHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHKDLSPTFRKLILLHLKKSVAAGKLVKVKGSFKL
Sbjct:   20 LSHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHKDLSPTFRKLILLHLKKSVAAGKLVKVKGSFKL 88
[Close]
BLAST of Ca_03763 vs. TrEMBL
Match: Q4A197_PEA (Histone H1 subtype 7 OS=Pisum sativum GN=his7 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.753e-26
Identity = 61/69 (88.41%), Postives = 66/69 (95.65%), Query Frame = 1 
Query:   58 LSHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHKDLSPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            LSHPT+AEMITEAI SLKERTGSSQ+AITKFIEEKHKDL PT+RKL+LLHLKKSVA+GKLVKVK SFKL
Sbjct:   19 LSHPTFAEMITEAITSLKERTGSSQYAITKFIEEKHKDLPPTYRKLVLLHLKKSVASGKLVKVKSSFKL 87
[Close]
BLAST of Ca_03763 vs. TrEMBL
Match: Q41025_PEA (Histone H1 OS=Pisum sativum GN=H1-41 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.361e-26
Identity = 60/69 (86.96%), Postives = 66/69 (95.65%), Query Frame = 1 
Query:   58 LSHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHKDLSPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            LSHPT+AEMITEAI SLKERTGSSQ+AITKFIEEKHKDL PT+RKL+LLHLKKSVA+GKLV+VK SFKL
Sbjct:   19 LSHPTFAEMITEAITSLKERTGSSQYAITKFIEEKHKDLPPTYRKLVLLHLKKSVASGKLVRVKSSFKL 87
[Close]
BLAST of Ca_03763 vs. TrEMBL
Match: Q4A196_PEA (Histone H1 subtype 7 OS=Pisum sativum GN=his7 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.863e-25
Identity = 60/69 (86.96%), Postives = 66/69 (95.65%), Query Frame = 1 
Query:   58 LSHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHKDLSPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            LSHPT+AEMITEAI SLKERTGSSQ+AITKFIEEK+KDL PT+RKL+LLHLKKSVA+GKLVKVK SFKL
Sbjct:   19 LSHPTFAEMITEAITSLKERTGSSQYAITKFIEEKYKDLPPTYRKLVLLHLKKSVASGKLVKVKSSFKL 87
[Close]
BLAST of Ca_03763 vs. TrEMBL
Match: Q4A195_PEA (Histone H1 subtype 7 OS=Pisum sativum GN=his7 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.863e-25
Identity = 60/69 (86.96%), Postives = 66/69 (95.65%), Query Frame = 1 
Query:   58 LSHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHKDLSPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            LSHPT+AEMITEAI SLKERTGSSQ+AITKFIEEK+KDL PT+RKL+LLHLKKSVA+GKLVKVK SFKL
Sbjct:   19 LSHPTFAEMITEAITSLKERTGSSQYAITKFIEEKYKDLPPTYRKLVLLHLKKSVASGKLVKVKSSFKL 87
[Close]
BLAST of Ca_03763 vs. TrEMBL
Match: C6TI08_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 3.884e-23
Identity = 56/69 (81.16%), Postives = 63/69 (91.30%), Query Frame = 1 
Query:   58 LSHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHKDLSPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            LSHPT+A MI EAI SLKERTGSSQ+AITKFIE KHK+L PT++KL+L+HLKKSVAAGKLVKVK SFKL
Sbjct:   19 LSHPTFAVMIAEAIASLKERTGSSQYAITKFIEGKHKELPPTYKKLVLVHLKKSVAAGKLVKVKNSFKL 87
[Close]
BLAST of Ca_03763 vs. TrEMBL
Match: C6THD3_SOYBN (Putative uncharacterized protein (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.476e-22
Identity = 55/68 (80.88%), Postives = 59/68 (86.76%), Query Frame = 1 
Query:   61 SHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHKDLSPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            +HP+Y EMI +AI SLKERTGSSQHAI KFIEEKHK L P FRKL+L HLKK VAAGKLVKVKGSFKL
Sbjct:   54 THPSYEEMIKDAITSLKERTGSSQHAIAKFIEEKHKQLPPNFRKLLLYHLKKLVAAGKLVKVKGSFKL 121
[Close]
BLAST of Ca_03763 vs. TrEMBL
Match: L7V3I7_9FABA (Histone H1 subtype 6 OS=Lathyrus gmelinii PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.517e-22
Identity = 55/68 (80.88%), Postives = 61/68 (89.71%), Query Frame = 1 
Query:   61 SHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHKDLSPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            SHPTY EMI EAIV LKERTGSSQ+AI KFIEEKHK L PTF+KL+L +LKK+VA+GKLVKVKGSFKL
Sbjct:   11 SHPTYEEMIKEAIVGLKERTGSSQYAIAKFIEEKHKQLPPTFKKLLLQNLKKNVASGKLVKVKGSFKL 78
[Close]
BLAST of Ca_03763 vs. TrEMBL
Match: L7V3I0_9FABA (Histone H1 subtype 6 OS=Vicia unijuga PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.517e-22
Identity = 55/68 (80.88%), Postives = 61/68 (89.71%), Query Frame = 1 
Query:   61 SHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHKDLSPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            SHPTY EMI EAIV LKERTGSSQ+AI KFIEEKHK L PTF+KL+L +LKK+VA+GKLVKVKGSFKL
Sbjct:   11 SHPTYEEMIKEAIVGLKERTGSSQYAIAKFIEEKHKQLPPTFKKLLLQNLKKNVASGKLVKVKGSFKL 78
[Close]
BLAST of Ca_03763 vs. TrEMBL
Match: L7V3H7_PEA (Histone H1 subtype 6 OS=Pisum sativum GN=His6 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.517e-22
Identity = 55/68 (80.88%), Postives = 61/68 (89.71%), Query Frame = 1 
Query:   61 SHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHKDLSPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            SHPTY EMI EAIV LKERTGSSQ+AI KFIEEKHK L PTF+KL+L +LKK+VA+GKLVKVKGSFKL
Sbjct:   11 SHPTYEEMIKEAIVGLKERTGSSQYAIAKFIEEKHKQLPPTFKKLLLQNLKKNVASGKLVKVKGSFKL 78
[Close]
BLAST of Ca_03763 vs. SwissProt
Match: H11_ARATH (Histone H1.1 OS=Arabidopsis thaliana GN=At1g06760 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.554e-22
Identity = 53/68 (77.94%), Postives = 61/68 (89.71%), Query Frame = 1 
Query:   61 SHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHKDLSPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            SHPTY EMI +AIV+LKERTGSSQ+AI KFIEEK K+L PTFRKL+LL+LK+ VA+GKLVKVK SFKL
Sbjct:   61 SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVKASFKL 128
[Close]
BLAST of Ca_03763 vs. SwissProt
Match: H12_ARATH (Histone H1.2 OS=Arabidopsis thaliana GN=At2g30620 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.007e-21
Identity = 51/68 (75.00%), Postives = 60/68 (88.24%), Query Frame = 1 
Query:   61 SHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHKDLSPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            SHPTY EMI +AIV+LKERTGSSQ+AI KFIEEKHK L PTFRKL+L++LK+ VA+ KLVKVK SFK+
Sbjct:   61 SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASFKI 128
[Close]
BLAST of Ca_03763 vs. SwissProt
Match: H1_PEA (Histone H1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.455e-20
Identity = 49/68 (72.06%), Postives = 58/68 (85.29%), Query Frame = 1 
Query:   61 SHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHKDLSPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            SHPTY EMI +AIVSLKE+ GSSQ+AI KFIEEK K L   F+KL+L +LKK+VA+GKL+KVKGSFKL
Sbjct:   61 SHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPANFKKLLLQNLKKNVASGKLIKVKGSFKL 128
[Close]
BLAST of Ca_03763 vs. SwissProt
Match: H1_EUPES (Histone H1 OS=Euphorbia esula PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.455e-20
Identity = 48/68 (70.59%), Postives = 58/68 (85.29%), Query Frame = 1 
Query:   61 SHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHKDLSPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            SHP++ EMI++AI +LKERTGSSQ+AI KF+E+KHK L   FRKL+L HLKK VA+GKLVKVK SFKL
Sbjct:   50 SHPSFFEMISDAISTLKERTGSSQYAINKFVEDKHKQLPSNFRKLLLFHLKKLVASGKLVKVKNSFKL 117
[Close]
BLAST of Ca_03763 vs. SwissProt
Match: H1_SOLLC (Histone H1 OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.680e-19
Identity = 48/68 (70.59%), Postives = 55/68 (80.88%), Query Frame = 1 
Query:   61 SHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHKDLSPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            +HP Y EMI +AIV+LKERTGSSQHAITKFIEEK K L   F+KL+L  LKK VA+ KLVKVK S+KL
Sbjct:   55 THPPYFEMIKDAIVTLKERTGSSQHAITKFIEEKQKSLPSNFKKLLLTQLKKFVASEKLVKVKNSYKL 122
[Close]
BLAST of Ca_03763 vs. SwissProt
Match: H1_WHEAT (Histone H1 OS=Triticum aestivum PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 3.354e-17
Identity = 45/69 (65.22%), Postives = 56/69 (81.16%), Query Frame = 1 
Query:   61 SHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHK-DLSPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            +HP+YAEM++EAI +LKER+GSS  AI KFIE+KHK  L   FRK++L  +KK VAAGKL KVKGS+KL
Sbjct:   54 AHPSYAEMVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAAGKLTKVKGSYKL 122
[Close]
BLAST of Ca_03763 vs. SwissProt
Match: H1_MAIZE (Histone H1 OS=Zea mays PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 4.380e-17
Identity = 45/69 (65.22%), Postives = 54/69 (78.26%), Query Frame = 1 
Query:   61 SHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHK-DLSPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            +H  YAEM++EAI SLKERTGSS +AI KF+E+KHK  L P FRKL+ + LKK VA GKL KVK S+KL
Sbjct:   49 THLPYAEMVSEAITSLKERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKVKNSYKL 117
[Close]
BLAST of Ca_03763 vs. SwissProt
Match: H1_SOLPN (Histone H1 OS=Solanum pennellii PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.732e-14
Identity = 36/70 (51.43%), Postives = 53/70 (75.71%), Query Frame = 1 
Query:   58 LSHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHKD-LSPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            ++HP Y +MI EA+++L E+ GSS +A+ K++E+KHKD L   FRK++ L LK S A GKL+K+K S+KL
Sbjct:   47 VTHPPYFQMIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASYKL 116
[Close]
BLAST of Ca_03763 vs. SwissProt
Match: H12_VOLCA (Histone H1-II OS=Volvox carteri GN=H1-II PE=2 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 6.126e-11
Identity = 39/70 (55.71%), Postives = 49/70 (70.00%), Query Frame = 1 
Query:   61 SHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKH-KDL-SPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            +HP Y +M+T+AI+SLKER GSS  A+ KFIE K+ KD+    F K + L LK  V  GKLVKVK S+KL
Sbjct:   24 THPPYIQMVTDAILSLKERDGSSLPALKKFIEAKYGKDIHDKKFPKTLSLALKTFVKNGKLVKVKNSYKL 93
[Close]
BLAST of Ca_03763 vs. SwissProt
Match: H11_VOLCA (Histone H1-I OS=Volvox carteri GN=H1-I PE=2 SV=3)

HSP 1 Score: 66.6254 bits (161), Expect = 1.045e-10
Identity = 38/70 (54.29%), Postives = 47/70 (67.14%), Query Frame = 1 
Query:   61 SHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKH-KDL-SPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            +HP Y EM+ +AI +LKER GSS  A+ KFIE K+ KD+    F K +   +K  V  GKLVKVKGSFKL
Sbjct:   58 THPPYIEMVKDAITTLKERNGSSLPALKKFIENKYGKDIHDKNFAKTLSQVVKTFVKGGKLVKVKGSFKL 127
[Close]
BLAST of Ca_03763 vs. DB:Swiss
Match: H12_ARATH (Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At2g30620 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.328e-27
Identity = 51/68 (75.00%), Postives = 60/68 (88.24%), Query Frame = 1 
Query:   61 SHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHKDLSPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            SHPTY EMI +AIV+LKERTGSSQ+AI KFIEEKHK L PTFRKL+L++LK+ VA+ KLVKVK SFK+
Sbjct:   61 SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASFKI 128
[Close]
BLAST of Ca_03763 vs. DB:Swiss
Match: H11_ARATH (Histone H1.1 OS=Arabidopsis thaliana OX=3702 GN=At1g06760 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 4.381e-22
Identity = 53/68 (77.94%), Postives = 61/68 (89.71%), Query Frame = 1 
Query:   61 SHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHKDLSPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            SHPTY EMI +AIV+LKERTGSSQ+AI KFIEEK K+L PTFRKL+LL+LK+ VA+GKLVKVK SFKL
Sbjct:   61 SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVKASFKL 128
[Close]
BLAST of Ca_03763 vs. DB:Swiss
Match: H1_WHEAT (Histone H1 OS=Triticum aestivum OX=4565 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 4.979e-21
Identity = 45/69 (65.22%), Postives = 56/69 (81.16%), Query Frame = 1 
Query:   61 SHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHKD-LSPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            +HP+YAEM++EAI +LKER+GSS  AI KFIE+KHK  L   FRK++L  +KK VAAGKL KVKGS+KL
Sbjct:   54 AHPSYAEMVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAAGKLTKVKGSYKL 122
[Close]
BLAST of Ca_03763 vs. DB:Swiss
Match: H1_MAIZE (Histone H1 OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.073e-20
Identity = 45/69 (65.22%), Postives = 54/69 (78.26%), Query Frame = 1 
Query:   61 SHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHK-DLSPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            +H  YAEM++EAI SLKERTGSS +AI KF+E+KHK  L P FRKL+ + LKK VA GKL KVK S+KL
Sbjct:   49 THLPYAEMVSEAITSLKERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKVKNSYKL 117
[Close]
BLAST of Ca_03763 vs. DB:Swiss
Match: H1_PEA (Histone H1 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.647e-19
Identity = 49/68 (72.06%), Postives = 58/68 (85.29%), Query Frame = 1 
Query:   61 SHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHKDLSPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            SHPTY EMI +AIVSLKE+ GSSQ+AI KFIEEK K L   F+KL+L +LKK+VA+GKL+KVKGSFKL
Sbjct:   61 SHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPANFKKLLLQNLKKNVASGKLIKVKGSFKL 128
[Close]
BLAST of Ca_03763 vs. DB:Swiss
Match: H1_EUPES (Histone H1 OS=Euphorbia esula OX=3993 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.501e-18
Identity = 47/67 (70.15%), Postives = 57/67 (85.07%), Query Frame = 1 
Query:   61 SHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHKDLSPTFRKLILLHLKKSVAAGKLVKVKGSFK 261
            SHP++ EMI++AI +LKERTGSSQ+AI KF+E+KHK L   FRKL+L HLKK VA+GKLVKVK SFK
Sbjct:   50 SHPSFFEMISDAISTLKERTGSSQYAINKFVEDKHKQLPSNFRKLLLFHLKKLVASGKLVKVKNSFK 116
[Close]
BLAST of Ca_03763 vs. DB:Swiss
Match: H1_SOLLC (Histone H1 OS=Solanum lycopersicum OX=4081 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.814e-17
Identity = 48/68 (70.59%), Postives = 55/68 (80.88%), Query Frame = 1 
Query:   61 SHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHKDLSPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            +HP Y EMI +AIV+LKERTGSSQHAITKFIEEK K L   F+KL+L  LKK VA+ KLVKVK S+KL
Sbjct:   55 THPPYFEMIKDAIVTLKERTGSSQHAITKFIEEKQKSLPSNFKKLLLTQLKKFVASEKLVKVKNSYKL 122
[Close]
BLAST of Ca_03763 vs. DB:Swiss
Match: H1_SOLPN (Histone H1 OS=Solanum pennellii OX=28526 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.025e-17
Identity = 36/70 (51.43%), Postives = 53/70 (75.71%), Query Frame = 1 
Query:   58 LSHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKHKD-LSPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            ++HP Y +MI EA+++L E+ GSS +A+ K++E+KHKD L   FRK++ L LK S A GKL+K+K S+KL
Sbjct:   47 VTHPPYFQMIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASYKL 116
[Close]
BLAST of Ca_03763 vs. DB:Swiss
Match: H12_VOLCA (Histone H1-II OS=Volvox carteri OX=3067 GN=H1-II PE=2 SV=3)

HSP 1 Score: 66.2402 bits (160), Expect = 3.670e-12
Identity = 39/70 (55.71%), Postives = 49/70 (70.00%), Query Frame = 1 
Query:   61 SHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKH-KDL-SPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            +HP Y +M+T+AI+SLKER GSS  A+ KFIE K+ KD+    F K + L LK  V  GKLVKVK S+KL
Sbjct:   24 THPPYIQMVTDAILSLKERDGSSLPALKKFIEAKYGKDIHDKKFPKTLSLALKTFVKNGKLVKVKNSYKL 93
[Close]
BLAST of Ca_03763 vs. DB:Swiss
Match: H11_VOLCA (Histone H1-I OS=Volvox carteri OX=3067 GN=H1-I PE=2 SV=3)

HSP 1 Score: 64.6994 bits (156), Expect = 1.424e-11
Identity = 38/70 (54.29%), Postives = 47/70 (67.14%), Query Frame = 1 
Query:   61 SHPTYAEMITEAIVSLKERTGSSQHAITKFIEEKH-KDL-SPTFRKLILLHLKKSVAAGKLVKVKGSFKL 264
            +HP Y EM+ +AI +LKER GSS  A+ KFIE K+ KD+    F K +   +K  V  GKLVKVKGSFKL
Sbjct:   58 THPPYIEMVKDAITTLKERNGSSLPALKKFIENKYGKDIHDKNFAKTLSQVVKTFVKGGKLVKVKGSFKL 127
The following BLAST results are available for this feature:
BLAST of Ca_03763 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
O65758_CICAR7.307e-30100.00Histone H1 OS=Cicer arietinum PE=2 SV=1[more]
Q4A197_PEA3.753e-2688.41Histone H1 subtype 7 OS=Pisum sativum GN=his7 PE=3... [more]
Q41025_PEA8.361e-2686.96Histone H1 OS=Pisum sativum GN=H1-41 PE=2 SV=1[more]
Q4A196_PEA1.863e-2586.96Histone H1 subtype 7 OS=Pisum sativum GN=his7 PE=3... [more]
Q4A195_PEA1.863e-2586.96Histone H1 subtype 7 OS=Pisum sativum GN=his7 PE=3... [more]
C6TI08_SOYBN3.884e-2381.16Uncharacterized protein OS=Glycine max PE=2 SV=1[more]
C6THD3_SOYBN1.476e-2280.88Putative uncharacterized protein (Fragment) OS=Gly... [more]
L7V3I7_9FABA2.517e-2280.88Histone H1 subtype 6 OS=Lathyrus gmelinii PE=3 SV=... [more]
L7V3I0_9FABA2.517e-2280.88Histone H1 subtype 6 OS=Vicia unijuga PE=3 SV=1[more]
L7V3H7_PEA2.517e-2280.88Histone H1 subtype 6 OS=Pisum sativum GN=His6 PE=3... [more]

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BLAST of Ca_03763 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 11
Match NameE-valueIdentityDescription
H11_ARATH1.554e-2277.94Histone H1.1 OS=Arabidopsis thaliana GN=At1g06760 ... [more]
H12_ARATH1.007e-2175.00Histone H1.2 OS=Arabidopsis thaliana GN=At2g30620 ... [more]
H1_PEA1.455e-2072.06Histone H1 OS=Pisum sativum PE=2 SV=1[more]
H1_EUPES1.455e-2070.59Histone H1 OS=Euphorbia esula PE=2 SV=1[more]
H1_SOLLC4.680e-1970.59Histone H1 OS=Solanum lycopersicum PE=3 SV=1[more]
H1_WHEAT3.354e-1765.22Histone H1 OS=Triticum aestivum PE=2 SV=2[more]
H1_MAIZE4.380e-1765.22Histone H1 OS=Zea mays PE=2 SV=2[more]
H1_SOLPN7.732e-1451.43Histone H1 OS=Solanum pennellii PE=2 SV=1[more]
H12_VOLCA6.126e-1155.71Histone H1-II OS=Volvox carteri GN=H1-II PE=2 SV=3[more]
H11_VOLCA1.045e-1054.29Histone H1-I OS=Volvox carteri GN=H1-I PE=2 SV=3[more]

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BLAST of Ca_03763 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
H12_ARATH2.328e-2775.00Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At... [more]
H11_ARATH4.381e-2277.94Histone H1.1 OS=Arabidopsis thaliana OX=3702 GN=At... [more]
H1_WHEAT4.979e-2165.22Histone H1 OS=Triticum aestivum OX=4565 PE=2 SV=2[more]
H1_MAIZE1.073e-2065.22Histone H1 OS=Zea mays OX=4577 PE=2 SV=2[more]
H1_PEA1.647e-1972.06Histone H1 OS=Pisum sativum OX=3888 PE=2 SV=1[more]
H1_EUPES1.501e-1870.15Histone H1 OS=Euphorbia esula OX=3993 PE=2 SV=1[more]
H1_SOLLC2.814e-1770.59Histone H1 OS=Solanum lycopersicum OX=4081 PE=3 SV... [more]
H1_SOLPN5.025e-1751.43Histone H1 OS=Solanum pennellii OX=28526 PE=2 SV=1[more]
H12_VOLCA3.670e-1255.71Histone H1-II OS=Volvox carteri OX=3067 GN=H1-II P... [more]
H11_VOLCA1.424e-1154.29Histone H1-I OS=Volvox carteri OX=3067 GN=H1-I PE=... [more]
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InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005818Histone H1/H5PFAMPF00538Linker_histonecoord: 21..89
score: 3.2
IPR005818Histone H1/H5SMARTSM00526Domain in histone familiescoord: 19..85
score: 1.8
IPR005818Histone H1/H5PROFILEPS51504H15coord: 21..90
score: 32
IPR005819Histone H5PRINTSPR00624HISTONEH5coord: 8..29
score: 1.7e-11coord: 35..52
score: 1.7e-11coord: 113..127
score: 1.7e-11coord: 177..191
score: 1.7
IPR011991Winged helix-turn-helix transcription repressor DNA-bindingGENE3D1.10.10.10no descriptioncoord: 21..90
score: 1.9
NoneNo IPR availablePANTHERPTHR11467FAMILY NOT NAMEDcoord: 4..191
score: 8.3
NoneNo IPR availableSEGsegsegcoord: 2..19
score: NAcoord: 89..191
score
NoneNo IPR availableSUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 16..97
score: 1.1
NoneNo IPR availableSEGsegsegcoord: 21..92
score
NoneNo IPR availableSEGsegsegcoord: 13..104
score
NoneNo IPR availableSEGsegsegcoord: 2..98
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_03763_v1.0_kabuli ID=Ca_03763_v1.0_kabuli; Name=Ca_03763; organism=Cicer arietinum; type=mRNA; length=576bp
ATGTCGACCACAGCGGCTCAACCCAAGTCAAAGAAAACAGCTTCGACAAA
GAAGCCACTTTCTCATCCAACCTACGCTGAGATGATAACTGAGGCTATTG
TGAGTCTGAAAGAAAGAACTGGTTCAAGCCAACACGCGATAACCAAATTC
ATCGAAGAAAAGCACAAGGATCTATCTCCCACCTTCCGCAAATTAATCTT
GCTTCATCTCAAAAAGTCGGTGGCTGCAGGCAAGCTTGTTAAGGTTAAGG
GTTCATTCAAACTCGCTCCGGCTAAATCTTCTGTGGCTAAACCTAAAGCC
GCTACTGCTCCCGCTGCTACCAAGAAGGCTAAGGCTGTTACCAAGCCAGC
CGCCAAGGCTGCTACCAAGCCCAAGGCTAAAGCTGTTGCGAAGCCTAAAG
CAGCGGCAAAGCCCAAAGCTGCAACGAAGCCGAAAACGGCGGCGAAGCCA
AAAGCGAAGACGGTTAAGACAACACCGGTGAAGAAGGCTGTTGCTAAGAC
AACGAAGAAGGTTCCTGTGAAGGGTGTGAAGAAGCCTAAGAGCGTTAAAA
CGCCGGTGAAGAAGGCTAAGAAATGA
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protein sequence of Ca_03763_v1.0_kabuli

>Ca_03763_v1.0_kabuli ID=Ca_03763_v1.0_kabuli; Name=Ca_03763_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=191bp
MSTTAAQPKSKKTASTKKPLSHPTYAEMITEAIVSLKERTGSSQHAITKF
IEEKHKDLSPTFRKLILLHLKKSVAAGKLVKVKGSFKLAPAKSSVAKPKA
ATAPAATKKAKAVTKPAAKAATKPKAKAVAKPKAAAKPKAATKPKTAAKP
KAKTVKTTPVKKAVAKTTKKVPVKGVKKPKSVKTPVKKAKK
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mRNA from alignment at Ca4:4953366..4954060-

Legend: CDSmRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_03763_v1.0_kabuli ID=Ca_03763_v1.0_kabuli; Name=Ca_03763; organism=Cicer arietinum; type=mRNA; length=695bp; location=Sequence derived from: Ca4:4953366..4954060- (Cicer arietinum
ATGTCGACCACAGCGGCTCAACCCAAGTCAAAGAAAACAGCTTCGACAAA
GAAGCCACTTTCTCATCCAACCTACGCTGAGGTACAAATTTTAATAAGAT
TTATTTTTTTATTAATTAATTTCAATATTCTTCATTTTCTTTACTGTAAT
ATTCTTTATTTTTTTTATTAATTGTTCATTTTTTTCTTCCGAAATTGAAG
ATGATAACTGAGGCTATTGTGAGTCTGAAAGAAAGAACTGGTTCAAGCCA
ACACGCGATAACCAAATTCATCGAAGAAAAGCACAAGGATCTATCTCCCA
CCTTCCGCAAATTAATCTTGCTTCATCTCAAAAAGTCGGTGGCTGCAGGC
AAGCTTGTTAAGGTTAAGGGTTCATTCAAACTCGCTCCGGCTAAATCTTC
TGTGGCTAAACCTAAAGCCGCTACTGCTCCCGCTGCTACCAAGAAGGCTA
AGGCTGTTACCAAGCCAGCCGCCAAGGCTGCTACCAAGCCCAAGGCTAAA
GCTGTTGCGAAGCCTAAAGCAGCGGCAAAGCCCAAAGCTGCAACGAAGCC
GAAAACGGCGGCGAAGCCAAAAGCGAAGACGGTTAAGACAACACCGGTGA
AGAAGGCTGTTGCTAAGACAACGAAGAAGGTTCCTGTGAAGGGTGTGAAG
AAGCCTAAGAGCGTTAAAACGCCGGTGAAGAAGGCTAAGAAATGA
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Coding sequence (CDS) from alignment at Ca4:4953366..4954060-

>Ca_03763_v1.0_kabuli ID=Ca_03763_v1.0_kabuli; Name=Ca_03763; organism=Cicer arietinum; type=CDS; length=576bp; location=Sequence derived from: Ca4:4953366..4954060- (Cicer arietinum
ATGTCGACCACAGCGGCTCAACCCAAGTCAAAGAAAACAGCTTCGACAAA
GAAGCCACTTTCTCATCCAACCTACGCTGAGATGATAACTGAGGCTATTG
TGAGTCTGAAAGAAAGAACTGGTTCAAGCCAACACGCGATAACCAAATTC
ATCGAAGAAAAGCACAAGGATCTATCTCCCACCTTCCGCAAATTAATCTT
GCTTCATCTCAAAAAGTCGGTGGCTGCAGGCAAGCTTGTTAAGGTTAAGG
GTTCATTCAAACTCGCTCCGGCTAAATCTTCTGTGGCTAAACCTAAAGCC
GCTACTGCTCCCGCTGCTACCAAGAAGGCTAAGGCTGTTACCAAGCCAGC
CGCCAAGGCTGCTACCAAGCCCAAGGCTAAAGCTGTTGCGAAGCCTAAAG
CAGCGGCAAAGCCCAAAGCTGCAACGAAGCCGAAAACGGCGGCGAAGCCA
AAAGCGAAGACGGTTAAGACAACACCGGTGAAGAAGGCTGTTGCTAAGAC
AACGAAGAAGGTTCCTGTGAAGGGTGTGAAGAAGCCTAAGAGCGTTAAAA
CGCCGGTGAAGAAGGCTAAGAAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR005818Histone_H1/H5_H15
IPR005819H1/H5
IPR011991ArsR-like_HTH
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006334nucleosome assembly