Ca_03768, Ca_03768_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_03768
Unique NameCa_03768_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length633
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca4chromosomeCa4:4895783..4897854 -Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR253Pisum sativum Cameor genome v1aPisum sativum
capsR277Pisum sativum Cameor genome v1aPisum sativum
capsR300Pisum sativum Cameor genome v1aPisum sativum
cavuR298Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR318Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR360Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR385Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0397Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0475Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0441Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0697Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0827Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1121Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL278Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR247Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR279Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR289Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR309Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR286Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
catifR345Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR307Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR331Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR349Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR361Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR332Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR380Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR280Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR282Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR125Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR131Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL136Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL377Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR278Cicer arietinum
cacarR286Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
evm.model.Chr07.1260Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-KK1_035855Cajanus cajan Asha genome v1.0Cajanus cajan
rna-KK1_007172Cajanus cajan Asha genome v1.0Cajanus cajan
Va09G048060.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigun06g114600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Hedin2.R1.5g186200.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-XM_014656855.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Tiffany.R1.5g146240.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Phvul.006G103700.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Psat03G0030200-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-TanjilR_10133Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.007G189200.2Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
jg3090.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-TanjilR_31699Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun07g156800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.model.Chr06.1254Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Psat06G0390900-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-TanjilR_10847Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
jg30838.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.3g081240.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004495539.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_012714192.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_03768-CDS1Ca_03768-CDS1Cicer arietinumCDS
Ca_03768-CDS2Ca_03768-CDS2Cicer arietinumCDS
Ca_03768-CDS3Ca_03768-CDS3Cicer arietinumCDS
Ca_03768-CDS4Ca_03768-CDS4Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_03768_v1.0_kabuliCa_03768_v1.0_kabuliCicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_03768 vs. SwissProt
Match: GIF1_ARATH (GRF1-interacting factor 1 OS=Arabidopsis thaliana GN=GIF1 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.058e-37
Identity = 74/84 (88.10%), Postives = 81/84 (96.43%), Query Frame = 1 
Query:    1 MQQHLMQMQPIMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQPQPPTMSSQYTS 252
            MQQHLMQMQP+MA YYP+NVT+DHIQQYLDENKSLILKIVESQNSGKL+ECAENQ+RLQRNLMYLAAIADSQPQPP++ SQY S
Sbjct:    1 MQQHLMQMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADSQPQPPSVHSQYGS 84
[Close]
BLAST of Ca_03768 vs. SwissProt
Match: GIF2_ARATH (GRF1-interacting factor 2 OS=Arabidopsis thaliana GN=GIF2 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.148e-19
Identity = 48/77 (62.34%), Postives = 61/77 (79.22%), Query Frame = 1 
Query:    4 QQHLMQMQPIMAAYYP-NNVTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQPQPPT 231
            QQ   QM P++ +  P NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ Q+ LQ+NLMYLAAIAD+QP PPT
Sbjct:    3 QQQSPQMFPMVPSIPPANNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPT 79
[Close]
BLAST of Ca_03768 vs. SwissProt
Match: GIF3_ARATH (GRF1-interacting factor 3 OS=Arabidopsis thaliana GN=GIF3 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.958e-19
Identity = 47/76 (61.84%), Postives = 60/76 (78.95%), Query Frame = 1 
Query:    7 QHLMQMQPIMAAYYP--NNVTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQPQPP 228
            Q   QM P++   +P  NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ Q+ LQ+NLMYLAAIAD+QPQPP
Sbjct:    2 QQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQKNLMYLAAIADAQPQPP 77
[Close]
BLAST of Ca_03768 vs. SwissProt
Match: SSXT_PONAB (Protein SSXT OS=Pongo abelii GN=SS18 PE=2 SV=2)

HSP 1 Score: 58.151 bits (139), Expect = 4.524e-8
Identity = 31/67 (46.27%), Postives = 41/67 (61.19%), Query Frame = 1 
Query:   58 VTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQ-------PQPPTMS 237
            +T   IQ+ LD+N  LI  I++SQN GK +EC++ Q  L  NL+YLA IADS        P PPT +
Sbjct:   16 ITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLLPAPPTQN 82
[Close]
BLAST of Ca_03768 vs. SwissProt
Match: SSXT_HUMAN (Protein SSXT OS=Homo sapiens GN=SS18 PE=1 SV=3)

HSP 1 Score: 58.151 bits (139), Expect = 4.524e-8
Identity = 31/67 (46.27%), Postives = 41/67 (61.19%), Query Frame = 1 
Query:   58 VTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQ-------PQPPTMS 237
            +T   IQ+ LD+N  LI  I++SQN GK +EC++ Q  L  NL+YLA IADS        P PPT +
Sbjct:   16 ITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLLPAPPTQN 82
[Close]
BLAST of Ca_03768 vs. SwissProt
Match: CREST_HUMAN (Calcium-responsive transactivator OS=Homo sapiens GN=SS18L1 PE=1 SV=2)

HSP 1 Score: 57.7658 bits (138), Expect = 5.909e-8
Identity = 33/67 (49.25%), Postives = 39/67 (58.21%), Query Frame = 1 
Query:   58 VTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQ-------PQPPTMS 237
            VT   IQ+ LDEN  LI  I+E Q+ GK  EC + Q  L RNL+YLA IADS        P PPT +
Sbjct:   16 VTQQTIQKMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVYLATIADSNQNMQSLLPAPPTQN 82
[Close]
BLAST of Ca_03768 vs. SwissProt
Match: CREST_BOVIN (Calcium-responsive transactivator OS=Bos taurus GN=SS18L1 PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 5.909e-8
Identity = 33/67 (49.25%), Postives = 39/67 (58.21%), Query Frame = 1 
Query:   58 VTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQ-------PQPPTMS 237
            VT   IQ+ LDEN  LI  I++ Q+ GK  EC + Q  L RNL+YLA IADS        P PPT S
Sbjct:   16 VTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVYLATIADSNQNMQSLLPAPPTQS 82
[Close]
BLAST of Ca_03768 vs. SwissProt
Match: CREST_XENLA (Calcium-responsive transactivator OS=Xenopus laevis GN=ss18l1 PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 1.316e-7
Identity = 32/67 (47.76%), Postives = 39/67 (58.21%), Query Frame = 1 
Query:   58 VTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQ-------PQPPTMS 237
            VT   IQ+ LDEN  LI  I++ Q+ GK  EC + Q  L RNL+YLA IADS        P PPT +
Sbjct:   16 VTQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLVYLATIADSNQNMQSLLPAPPTQN 82
[Close]
BLAST of Ca_03768 vs. SwissProt
Match: CREST_RAT (Calcium-responsive transcription coactivator OS=Rattus norvegicus GN=Ss18l1 PE=1 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 1.316e-7
Identity = 32/67 (47.76%), Postives = 39/67 (58.21%), Query Frame = 1 
Query:   58 VTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQ-------PQPPTMS 237
            VT   IQ+ LDEN  LI  I++ Q+ GK  EC + Q  L RNL+YLA IADS        P PPT +
Sbjct:   16 VTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVYLATIADSNQNMQSLLPAPPTQN 82
[Close]
BLAST of Ca_03768 vs. SwissProt
Match: CREST_MOUSE (Calcium-responsive transactivator OS=Mus musculus GN=Ss18l1 PE=1 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 1.316e-7
Identity = 32/67 (47.76%), Postives = 39/67 (58.21%), Query Frame = 1 
Query:   58 VTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQ-------PQPPTMS 237
            VT   IQ+ LDEN  LI  I++ Q+ GK  EC + Q  L RNL+YLA IADS        P PPT +
Sbjct:   16 VTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVYLATIADSNQNMQSLLPAPPTQN 82
[Close]
BLAST of Ca_03768 vs. TrEMBL
Match: G7I6V2_MEDTR (Calcium-responsive transactivator OS=Medicago truncatula GN=MTR_1g080590 PE=4 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 2.648e-48
Identity = 116/213 (54.46%), Postives = 123/213 (57.75%), Query Frame = 1 
Query:    1 MQQHLMQMQPIMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQPQPPTMSSQYTSXXXXXXXXXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEG---GGNASIGTSGFPDFIRGSTGDGIHGTGKQDIXXXXXXXXXXXXXXXXXXXETLYLKSSGDGN 630
            MQQHLMQMQP+MAAYYPNNVTTDHIQQYLDENKSLILKIVESQN+GKLTECAENQSRLQRNLMYLAAIADSQPQPPTM  QY S                           R                                  EG   GGN+S+G +GFPDF R S GDG+HG+GKQDI                   ETLYLKSSGDGN
Sbjct:    1 MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNTGKLTECAENQSRLQRNLMYLAAIADSQPQPPTMPGQYPSSGMMQQGGHYMQAQQAQQMTQQQLMAARSSLMYAQQLQQQQALQSQLGMNSSGSQGLHMLHSEGANVGGNSSLG-AGFPDFGRSSAGDGLHGSGKQDI-GSTDGRGGSSSGHSGDGGETLYLKSSGDGN 211
[Close]
BLAST of Ca_03768 vs. TrEMBL
Match: I3SME7_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.453e-46
Identity = 114/213 (53.52%), Postives = 120/213 (56.34%), Query Frame = 1 
Query:    1 MQQHLMQMQPIMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQPQPPTMSSQYTSXXXXXXXXXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEG---GGNASIGTSGFPDFIRGSTGDGIHGTGKQDIXXXXXXXXXXXXXXXXXXXETLYLKSSGDGN 630
            MQQHLMQMQP+MAAYYPNNVTTDHIQQYLDENKSLILKIVESQN+GKLTECAENQSRLQRNLMYLAAIADSQPQPPTM  QY S                           R                                  EG   GGN+S+G +GFPDF R S GDG+HG GKQDI                   ETLYLK  GDGN
Sbjct:    1 MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNTGKLTECAENQSRLQRNLMYLAAIADSQPQPPTMPGQYPSSGMMQQGGHYMQAQQAQQMTQQQLMAARSSLMYAQQLQQQQALQSQLGMNSSGSQGLHMLHSEGANVGGNSSLG-AGFPDFGRSSAGDGLHGGGKQDI-GSTDGRGGSSSGHSGDGGETLYLKFFGDGN 211
[Close]
BLAST of Ca_03768 vs. TrEMBL
Match: I1NCB4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.233e-37
Identity = 78/82 (95.12%), Postives = 81/82 (98.78%), Query Frame = 1 
Query:    1 MQQHLMQMQPIMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQPQPPTMSSQY 246
            MQQHLMQMQP+MAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKL+ECAENQ+RLQRNLMYLAAIADSQPQPPTMS QY
Sbjct:    1 MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADSQPQPPTMSGQY 82
[Close]
BLAST of Ca_03768 vs. TrEMBL
Match: I1JRQ5_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 4.684e-37
Identity = 77/82 (93.90%), Postives = 80/82 (97.56%), Query Frame = 1 
Query:    1 MQQHLMQMQPIMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQPQPPTMSSQY 246
            MQQHLMQMQP+MAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKL+ECAENQ+RLQRNLMYLAAIADSQPQPPTM  QY
Sbjct:    1 MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADSQPQPPTMPGQY 82
[Close]
BLAST of Ca_03768 vs. TrEMBL
Match: B9S7I1_RICCO (Synovial sarcoma associated ss18 protein, putative OS=Ricinus communis GN=RCOM_0608010 PE=4 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 7.990e-37
Identity = 76/84 (90.48%), Postives = 82/84 (97.62%), Query Frame = 1 
Query:    1 MQQHLMQMQPIMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQPQPPTMSSQYTS 252
            MQQHLMQMQP+MAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGK++ECAENQ+RLQRNLMYLAAIADSQPQPP M SQ++S
Sbjct:    1 MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKISECAENQARLQRNLMYLAAIADSQPQPPNMHSQFSS 84
[Close]
BLAST of Ca_03768 vs. TrEMBL
Match: M5WCS6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011329mg PE=4 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.363e-36
Identity = 76/84 (90.48%), Postives = 81/84 (96.43%), Query Frame = 1 
Query:    1 MQQHLMQMQPIMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQPQPPTMSSQYTS 252
            MQQHLMQMQP+MAAYYPNNVTTDHIQQYLDENKSLILKIVESQN+GKL+ECAENQ++LQRNLMYLAAIADSQPQPPTM  QY S
Sbjct:    1 MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNTGKLSECAENQAKLQRNLMYLAAIADSQPQPPTMHPQYPS 84
[Close]
BLAST of Ca_03768 vs. TrEMBL
Match: F6HVK9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0081g00200 PE=4 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.363e-36
Identity = 76/82 (92.68%), Postives = 81/82 (98.78%), Query Frame = 1 
Query:    1 MQQHLMQMQPIMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQPQPPTMSSQY 246
            MQQHLMQMQP+MAAYYP+NVTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQ+RLQRNLMYLAAIADSQPQPPTM +Q+
Sbjct:    1 MQQHLMQMQPMMAAYYPSNVTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQARLQRNLMYLAAIADSQPQPPTMHAQF 82
[Close]
BLAST of Ca_03768 vs. TrEMBL
Match: I1NIS0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.780e-36
Identity = 78/84 (92.86%), Postives = 79/84 (94.05%), Query Frame = 1 
Query:    1 MQQHLMQMQPIMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQPQPPTMSSQYTS 252
            MQQHLMQMQPIMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKL+ECAENQSRLQRNLMYLAAIADSQPQP  M  QY S
Sbjct:    1 MQQHLMQMQPIMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADSQPQPSPMPGQYPS 84
[Close]
BLAST of Ca_03768 vs. TrEMBL
Match: C6TGJ5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.780e-36
Identity = 78/84 (92.86%), Postives = 79/84 (94.05%), Query Frame = 1 
Query:    1 MQQHLMQMQPIMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQPQPPTMSSQYTS 252
            MQQHLMQMQPIMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKL+ECAENQSRLQRNLMYLAAIADSQPQP  M  QY S
Sbjct:    1 MQQHLMQMQPIMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADSQPQPSPMPGQYPS 84
[Close]
BLAST of Ca_03768 vs. TrEMBL
Match: I1LBN5_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 5.179e-36
Identity = 76/84 (90.48%), Postives = 80/84 (95.24%), Query Frame = 1 
Query:    1 MQQHLMQMQPIMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQPQPPTMSSQYTS 252
            MQQHLMQMQP+MAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKL+ECAENQSRLQRNLMYLAAIADSQPQP  ++ QY S
Sbjct:    1 MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADSQPQPSPLAGQYPS 84
[Close]
BLAST of Ca_03768 vs. DB:Swiss
Match: GIF1_ARATH (GRF1-interacting factor 1 OS=Arabidopsis thaliana OX=3702 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 2.449e-47
Identity = 74/84 (88.10%), Postives = 81/84 (96.43%), Query Frame = 1 
Query:    1 MQQHLMQMQPIMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQPQPPTMSSQYTS 252
            MQQHLMQMQP+MA YYP+NVT+DHIQQYLDENKSLILKIVESQNSGKL+ECAENQ+RLQRNLMYLAAIADSQPQPP++ SQY S
Sbjct:    1 MQQHLMQMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADSQPQPPSVHSQYGS 84
[Close]
BLAST of Ca_03768 vs. DB:Swiss
Match: GIF1_ORYSJ (GRF-interacting factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.588e-26
Identity = 56/85 (65.88%), Postives = 64/85 (75.29%), Query Frame = 1 
Query:    4 QQHLMQM-QPIMAAYY-PNNVTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQPQPPTMSSQYTS 252
            QQHLMQM Q +M  Y  P  VTTD IQQYLDENK LIL I+++QN+GK+ ECA NQ++LQ NLMYLAAIADSQP      SQY S
Sbjct:    3 QQHLMQMNQGMMGGYASPTTVTTDLIQQYLDENKQLILAILDNQNNGKVEECARNQAKLQHNLMYLAAIADSQPPQTAAMSQYPS 87
[Close]
BLAST of Ca_03768 vs. DB:Swiss
Match: GIF3_ARATH (GRF1-interacting factor 3 OS=Arabidopsis thaliana OX=3702 GN=GIF3 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.972e-24
Identity = 46/73 (63.01%), Postives = 59/73 (80.82%), Query Frame = 1 
Query:   19 QMQPIMAAYYP--NNVTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQPQPPT 231
            QM P++   +P  NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ Q+ LQ+NLMYLAAIAD+QPQPP 
Sbjct:    6 QMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQKNLMYLAAIADAQPQPPA 78
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BLAST of Ca_03768 vs. DB:Swiss
Match: GIF1_MAIZE (GRF-interacting factor 1 OS=Zea mays OX=4577 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.650e-23
Identity = 54/85 (63.53%), Postives = 62/85 (72.94%), Query Frame = 1 
Query:    4 QQHLMQM-QPIMAAYY-PNNVTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQPQPPTMSSQYTS 252
            QQHLMQM Q +M  Y  P  VTTD IQQYLDENK LIL I+++QN+GK  EC  +Q++LQ NLMYLAAIADSQP      SQY S
Sbjct:    3 QQHLMQMNQNMMGGYTSPAAVTTDLIQQYLDENKQLILAILDNQNNGKAEECERHQAKLQHNLMYLAAIADSQPPQTAPLSQYPS 87
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BLAST of Ca_03768 vs. DB:Swiss
Match: GIF2_ARATH (GRF1-interacting factor 2 OS=Arabidopsis thaliana OX=3702 GN=GIF2 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.122e-20
Identity = 44/72 (61.11%), Postives = 57/72 (79.17%), Query Frame = 1 
Query:    4 QQHLMQMQPIMAAYYP-NNVTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQ 216
            QQ   QM P++ +  P NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ Q+ LQ+NLMYLAAIAD+Q
Sbjct:    3 QQQSPQMFPMVPSIPPANNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQ 74
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BLAST of Ca_03768 vs. DB:Swiss
Match: S18L2_HUMAN (SS18-like protein 2 OS=Homo sapiens OX=9606 GN=SS18L2 PE=3 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 1.724e-9
Identity = 28/54 (51.85%), Postives = 35/54 (64.81%), Query Frame = 1 
Query:   58 VTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQP 219
            V  + IQ+ L+EN  LI  IVE QN G+  EC + Q  L RNL+YLA IAD+ P
Sbjct:   16 VNQETIQRLLEENDQLIRCIVEYQNKGRGNECVQYQHVLHRNLIYLATIADASP 69
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BLAST of Ca_03768 vs. DB:Swiss
Match: CREST_HUMAN (Calcium-responsive transactivator OS=Homo sapiens OX=9606 GN=SS18L1 PE=1 SV=2)

HSP 1 Score: 59.3066 bits (142), Expect = 3.415e-9
Identity = 33/65 (50.77%), Postives = 38/65 (58.46%), Query Frame = 1 
Query:   58 VTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQ-------PQPPT 231
            VT   IQ+ LDEN  LI  I+E Q+ GK  EC + Q  L RNL+YLA IADS        P PPT
Sbjct:   16 VTQQTIQKMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVYLATIADSNQNMQSLLPAPPT 80
[Close]
BLAST of Ca_03768 vs. DB:Swiss
Match: S18L2_MOUSE (SS18-like protein 2 OS=Mus musculus OX=10090 GN=Ss18l2 PE=3 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 5.604e-9
Identity = 28/62 (45.16%), Postives = 37/62 (59.68%), Query Frame = 1 
Query:   58 VTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQPQPPTMSSQ 243
            V  + IQ+ L+EN  LI  IVE QN G+  EC + Q  L RNL+YLA IAD+     T + +
Sbjct:   16 VNQETIQRLLEENDQLIRCIVEYQNKGRANECVQYQHVLHRNLIYLATIADANTSSLTKAVE 77
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BLAST of Ca_03768 vs. DB:Swiss
Match: CREST_BOVIN (Calcium-responsive transactivator OS=Bos taurus OX=9913 GN=SS18L1 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 5.839e-9
Identity = 33/67 (49.25%), Postives = 39/67 (58.21%), Query Frame = 1 
Query:   58 VTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQ-------PQPPTMS 237
            VT   IQ+ LDEN  LI  I++ Q+ GK  EC + Q  L RNL+YLA IADS        P PPT S
Sbjct:   16 VTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVYLATIADSNQNMQSLLPAPPTQS 82
[Close]
BLAST of Ca_03768 vs. DB:Swiss
Match: SSXT_HUMAN (Protein SSXT OS=Homo sapiens OX=9606 GN=SS18 PE=1 SV=3)

HSP 1 Score: 58.151 bits (139), Expect = 7.259e-9
Identity = 31/65 (47.69%), Postives = 40/65 (61.54%), Query Frame = 1 
Query:   58 VTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQ-------PQPPT 231
            +T   IQ+ LD+N  LI  I++SQN GK +EC++ Q  L  NL+YLA IADS        P PPT
Sbjct:   16 ITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLLPAPPT 80
The following BLAST results are available for this feature:
BLAST of Ca_03768 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 12
Match NameE-valueIdentityDescription
GIF1_ARATH6.058e-3788.10GRF1-interacting factor 1 OS=Arabidopsis thaliana ... [more]
GIF2_ARATH1.148e-1962.34GRF1-interacting factor 2 OS=Arabidopsis thaliana ... [more]
GIF3_ARATH1.958e-1961.84GRF1-interacting factor 3 OS=Arabidopsis thaliana ... [more]
SSXT_PONAB4.524e-846.27Protein SSXT OS=Pongo abelii GN=SS18 PE=2 SV=2[more]
SSXT_HUMAN4.524e-846.27Protein SSXT OS=Homo sapiens GN=SS18 PE=1 SV=3[more]
CREST_HUMAN5.909e-849.25Calcium-responsive transactivator OS=Homo sapiens ... [more]
CREST_BOVIN5.909e-849.25Calcium-responsive transactivator OS=Bos taurus GN... [more]
CREST_XENLA1.316e-747.76Calcium-responsive transactivator OS=Xenopus laevi... [more]
CREST_RAT1.316e-747.76Calcium-responsive transcription coactivator OS=Ra... [more]
CREST_MOUSE1.316e-747.76Calcium-responsive transactivator OS=Mus musculus ... [more]

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BLAST of Ca_03768 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7I6V2_MEDTR2.648e-4854.46Calcium-responsive transactivator OS=Medicago trun... [more]
I3SME7_MEDTR1.453e-4653.52Uncharacterized protein OS=Medicago truncatula PE=... [more]
I1NCB4_SOYBN1.233e-3795.12Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I1JRQ5_SOYBN4.684e-3793.90Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
B9S7I1_RICCO7.990e-3790.48Synovial sarcoma associated ss18 protein, putative... [more]
M5WCS6_PRUPE1.363e-3690.48Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
F6HVK9_VITVI1.363e-3692.68Putative uncharacterized protein OS=Vitis vinifera... [more]
I1NIS0_SOYBN1.780e-3692.86Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
C6TGJ5_SOYBN1.780e-3692.86Putative uncharacterized protein OS=Glycine max PE... [more]
I1LBN5_SOYBN5.179e-3690.48Uncharacterized protein OS=Glycine max PE=4 SV=1[more]

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BLAST of Ca_03768 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
GIF1_ARATH2.449e-4788.10GRF1-interacting factor 1 OS=Arabidopsis thaliana ... [more]
GIF1_ORYSJ2.588e-2665.88GRF-interacting factor 1 OS=Oryza sativa subsp. ja... [more]
GIF3_ARATH5.972e-2463.01GRF1-interacting factor 3 OS=Arabidopsis thaliana ... [more]
GIF1_MAIZE1.650e-2363.53GRF-interacting factor 1 OS=Zea mays OX=4577 GN=GI... [more]
GIF2_ARATH1.122e-2061.11GRF1-interacting factor 2 OS=Arabidopsis thaliana ... [more]
S18L2_HUMAN1.724e-951.85SS18-like protein 2 OS=Homo sapiens OX=9606 GN=SS1... [more]
CREST_HUMAN3.415e-950.77Calcium-responsive transactivator OS=Homo sapiens ... [more]
S18L2_MOUSE5.604e-945.16SS18-like protein 2 OS=Mus musculus OX=10090 GN=Ss... [more]
CREST_BOVIN5.839e-949.25Calcium-responsive transactivator OS=Bos taurus OX... [more]
SSXT_HUMAN7.259e-947.69Protein SSXT OS=Homo sapiens OX=9606 GN=SS18 PE=1 ... [more]
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InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007726SSXTPANTHERPTHR23107FAMILY NOT NAMEDcoord: 2..135
score: 9.3
IPR007726SSXTPFAMPF05030SSXTcoord: 19..73
score: 8.9
NoneNo IPR availableSEGsegsegcoord: 85..111
score: NAcoord: 113..146
score: NAcoord: 180..198
score
NoneNo IPR availableSEGsegsegcoord: 18..28
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_03768_v1.0_kabuli ID=Ca_03768_v1.0_kabuli; Name=Ca_03768; organism=Cicer arietinum; type=mRNA; length=633bp
ATGCAACAGCACCTGATGCAGATGCAGCCCATCATGGCTGCTTACTATCC
CAACAACGTCACCACTGATCATATTCAACAGTACCTAGATGAGAACAAAT
CCTTAATTCTCAAGATTGTTGAAAGCCAGAATTCTGGCAAGCTCACCGAA
TGTGCTGAGAACCAATCAAGGCTGCAGAGAAATCTCATGTACCTAGCTGC
AATAGCTGATTCTCAACCTCAACCACCTACCATGTCTAGTCAGTATACTT
CCGGTGGAATGATGCAGCAAGGAGCACACTACATGCAAGGTCAACAAGCT
CAGCAGATGACACAACAACAACTAATGGCTGCACGCTCCTCCCTTTTGTA
TGCTCAACAACTTCAACAGCAGCAAGCTTTGCAAAGCCAACTTGGTATGA
GTTCAAGTGGAAGTCAAGGCCTTCACATGTTGCATAGTGAAGGAGGTGGC
AATGCATCTATAGGTACCAGTGGTTTTCCCGATTTCATACGCGGCTCCAC
GGGGGACGGTATTCATGGTACTGGTAAGCAAGACATTGGTGGCTCGGTTG
AAGGACGTGGAGGAAGCTCTAGTGGTCACTCCGGTGATGGTGGCGAAACC
CTTTACCTGAAATCTTCTGGTGATGGGAATTAG
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protein sequence of Ca_03768_v1.0_kabuli

>Ca_03768_v1.0_kabuli ID=Ca_03768_v1.0_kabuli; Name=Ca_03768_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=210bp
MQQHLMQMQPIMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLTE
CAENQSRLQRNLMYLAAIADSQPQPPTMSSQYTSGGMMQQGAHYMQGQQA
QQMTQQQLMAARSSLLYAQQLQQQQALQSQLGMSSSGSQGLHMLHSEGGG
NASIGTSGFPDFIRGSTGDGIHGTGKQDIGGSVEGRGGSSSGHSGDGGET
LYLKSSGDGN
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mRNA from alignment at Ca4:4895783..4897854-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_03768_v1.0_kabuli ID=Ca_03768_v1.0_kabuli; Name=Ca_03768; organism=Cicer arietinum; type=mRNA; length=2072bp; location=Sequence derived from: Ca4:4895783..4897854- (Cicer arietinum
ATGCAACAGCACCTGATGCAGATGCAGCCCATCATGGCTGCTTACTATCC
CAACAACGTCACCACTGATCATATTCAACAGGTTCTTTCCTTATTCTTCC
CTTTCTTCTTCTCCTTCTTATCCCTTTTCTTCAATTGGATACACTCTCTT
TTTCTCTGCTCTGCGGGACCATTTTTCTATGTTCACCGAGTACCTTCTTT
TTGGCTTCATTTAACTATTTATTTTCTCTCTTTTTTTTTTCAAGCAGTAC
CTAGATGAGAACAAATCCTTAATTCTCAAGATTGTTGAAAGCCAGAATTC
TGGCAAGCTCACCGAATGTGCTGAGTAAGTAACATTTACTATTGTCTCAC
TTTGCAGGCCAATATAAAAACTAAAACAACCCCCCCTCACTGCTATGTAT
AACTAAAACCAAGGTGTTTCAATATTTTGAGTTACATGGAGTATGGGGCT
GTGACTTTCTAATTTTTGCAGCCTTTTTCTAAGATGTTGGATACCCCACA
AAACTTTAAATACTTTTGACAGTTCTATATAGTCATTGACAAGAGTTTCA
AAACATGATGACTTGATGAATAAAGTTACAACTTTAGGCCAACCTTTTTT
GGAAACTAGATCTTCAAGTTTTATCTGCATATTAACTTTTTTCCTAAAGA
ATCATTAGTGCTTAACATAATAACCCTCTTGCATAATTTAAGGAACCAAT
CAAGGCTGCAGAGAAATCTCATGTACCTAGCTGCAATAGCTGATTCTCAA
CCTCAACCACCTACCATGTCTAGTCAGGTATATACCTATCTATTTTCAGA
ATGTTCATAACTAGTTAACTCAGGCCCTAAATATATGAGTCGATAAAAGT
TAATTTATTTGATTTAAATTTGGAAAAAATATATTAATTTTTCAAATAAA
TGAAATTTTGTTGATTCAACTTTATATTTAAAATTGGAGTTAGTCATATC
TCTATCTCTAGTTATAAGTCTCTTTGAAATATAAATAAATGTTCAATTTC
AAATTAGTAGATACGTTTTTACATTTTTTAAATAAATGTATCCATACTAT
AATTTGTATTAGAAAACGAAAAGTCAGATTTGGACACAGCTACACTCTAT
TCAATTTTGTTTAACTTACACGTATTAAGAATTAAGAAATGACTATAAAG
TGAAGAAAGATTAACCATTTAACAAATATTCTTCTTAATTATTGACGCTG
TTTCTCATTATCATAAATGCAAAATAGAATTAATGCTGTAGAAGTGATGT
ACATAATAATAATTGAAGAGTACAATTGCAATAAATAATTGAAATTATAT
TCAAAATTGAAAATGAAATTCATTTTGAAACACAATTTTAGATATTTATT
GAGACAAATGGAATACAATATTTACTTTATTTTTTATTTTTTTTAATATT
CCTATGTGAATATGATAAAAAGTCTTTTCAAGGAAGATGAAATAAGCTAT
CAGTTAGAAAGCAATTAACTATATGGAAACTTTAACCTTAAATCTCAAAA
GAAATATATTGCAGTCTGTCTACAGTTAGAGATATATGTACAATTGACCA
AGCTCCATGATTAAATTTCTTATGTTCATTCATTGCATTTTTTCATCTGT
TTTTCTTTTGAATAAAAGTTGGTATTCTAACATGATACAATTTGTTTAGT
GAAATTTCATATTGTTTTGAACCACAATGCAGTATACTTCCGGTGGAATG
ATGCAGCAAGGAGCACACTACATGCAAGGTCAACAAGCTCAGCAGATGAC
ACAACAACAACTAATGGCTGCACGCTCCTCCCTTTTGTATGCTCAACAAC
TTCAACAGCAGCAAGCTTTGCAAAGCCAACTTGGTATGAGTTCAAGTGGA
AGTCAAGGCCTTCACATGTTGCATAGTGAAGGAGGTGGCAATGCATCTAT
AGGTACCAGTGGTTTTCCCGATTTCATACGCGGCTCCACGGGGGACGGTA
TTCATGGTACTGGTAAGCAAGACATTGGTGGCTCGGTTGAAGGACGTGGA
GGAAGCTCTAGTGGTCACTCCGGTGATGGTGGCGAAACCCTTTACCTGAA
ATCTTCTGGTGATGGGAATTAG
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Coding sequence (CDS) from alignment at Ca4:4895783..4897854-

>Ca_03768_v1.0_kabuli ID=Ca_03768_v1.0_kabuli; Name=Ca_03768; organism=Cicer arietinum; type=CDS; length=633bp; location=Sequence derived from: Ca4:4895783..4897854- (Cicer arietinum
ATGCAACAGCACCTGATGCAGATGCAGCCCATCATGGCTGCTTACTATCC
CAACAACGTCACCACTGATCATATTCAACAGTACCTAGATGAGAACAAAT
CCTTAATTCTCAAGATTGTTGAAAGCCAGAATTCTGGCAAGCTCACCGAA
TGTGCTGAGAACCAATCAAGGCTGCAGAGAAATCTCATGTACCTAGCTGC
AATAGCTGATTCTCAACCTCAACCACCTACCATGTCTAGTCAGTATACTT
CCGGTGGAATGATGCAGCAAGGAGCACACTACATGCAAGGTCAACAAGCT
CAGCAGATGACACAACAACAACTAATGGCTGCACGCTCCTCCCTTTTGTA
TGCTCAACAACTTCAACAGCAGCAAGCTTTGCAAAGCCAACTTGGTATGA
GTTCAAGTGGAAGTCAAGGCCTTCACATGTTGCATAGTGAAGGAGGTGGC
AATGCATCTATAGGTACCAGTGGTTTTCCCGATTTCATACGCGGCTCCAC
GGGGGACGGTATTCATGGTACTGGTAAGCAAGACATTGGTGGCTCGGTTG
AAGGACGTGGAGGAAGCTCTAGTGGTCACTCCGGTGATGGTGGCGAAACC
CTTTACCTGAAATCTTCTGGTGATGGGAATTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR007726SS18_N