Ca_19078, Ca_19078_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_19078 vs. SwissProt
Match: DJC28_MOUSE (DnaJ homolog subfamily C member 28 OS=Mus musculus GN=Dnajc28 PE=2 SV=2) HSP 1 Score: 54.6842 bits (130), Expect = 5.233e-7 Identity = 40/137 (29.20%), Postives = 63/137 (45.99%), Query Frame = 1 Query: 256 VVEQRIWHSMEEGQFEXXXXXXXXXXXDTN-PHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWR----MSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVP-FGRQMFGLKWEKEISYLEE 648 +VE I SM +G F+ + + DP L RIL N PEW+ + KEI+ I + R MS KK + W + E + +++++N ++ +NLIVP RQ +KEI ++E Sbjct: 203 LVEDLIQESMAKGDFDNLSGKGKPLKKFSGCSYIDPMTHNLNRILIDNGYQPEWILMQKEIKDTIEQLREALLMSRKKLGNPLSPTEQKQWAQVCEQFQEKIRKLNKRINDFNLIVPILTRQKVHFDAQKEIIRVQE 339
BLAST of Ca_19078 vs. TrEMBL
Match: I1LZC4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 298.516 bits (763), Expect = 8.974e-79 Identity = 144/169 (85.21%), Postives = 150/169 (88.76%), Query Frame = 1 Query: 142 KKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEXXXXXXXXXXXDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 648 KKL DRLS+VIDAVNDRKLPPELRGQ NNVRSETD+INVVEQRIWHSMEEGQFE DTNPHADPAEDTLYRILSKN CAPEWVELNKEIRS+ISEWR SLKKAWA KCSGDHS WVES+EALK QL+EINDKVFRYNLIVPFGRQMFGLKWEKE+ YLEE Sbjct: 43 KKLTDRLSSVIDAVNDRKLPPELRGQHNNVRSETDMINVVEQRIWHSMEEGQFENLPGKGKPLKLDTNPHADPAEDTLYRILSKNGCAPEWVELNKEIRSKISEWRKSLKKAWATKCSGDHSEWVESTEALKSQLREINDKVFRYNLIVPFGRQMFGLKWEKELGYLEE 211
BLAST of Ca_19078 vs. TrEMBL
Match: I1L947_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 294.664 bits (753), Expect = 1.296e-77 Identity = 143/169 (84.62%), Postives = 151/169 (89.35%), Query Frame = 1 Query: 142 KKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEXXXXXXXXXXXDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 648 KKL+DRLSTVIDAVNDRKLPPELRGQR+NVRSETD+INVVEQRIWH+MEEG+FE DTNPHADPAEDTLYRILSKN APEWVELNKEIRS+ISEWR SLKKAWA KCSGDHS WVESSEALK QL+EINDKVFRYNLIVPFGRQMFGLKWEKE+ YLEE Sbjct: 47 KKLMDRLSTVIDAVNDRKLPPELRGQRSNVRSETDIINVVEQRIWHTMEEGKFENLPGKGKPLKLDTNPHADPAEDTLYRILSKNGYAPEWVELNKEIRSKISEWRKSLKKAWATKCSGDHSEWVESSEALKSQLREINDKVFRYNLIVPFGRQMFGLKWEKELGYLEE 215
BLAST of Ca_19078 vs. TrEMBL
Match: G7IA78_MEDTR (DnaJ homolog subfamily C member OS=Medicago truncatula GN=MTR_1g062250 PE=2 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 4.609e-75 Identity = 143/173 (82.66%), Postives = 147/173 (84.97%), Query Frame = 1 Query: 130 KPDNKKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEXXXXXXXXXXXDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 648 KPD KKL DRLS VIDA NDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFE DTNPHADPAEDTLYRILSKN CAPEWVELNKEIR RISEWR SLKKA ANKCS D S+WV SS+ALK QLKEINDKVFRYNLIVPFGRQM GLKWEKE+ L+E Sbjct: 41 KPDKKKLGDRLSAVIDAANDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFENLPGKGKPLKLDTNPHADPAEDTLYRILSKNGCAPEWVELNKEIRFRISEWRKSLKKASANKCSEDQSMWVGSSQALKSQLKEINDKVFRYNLIVPFGRQMNGLKWEKELGNLDE 213
BLAST of Ca_19078 vs. TrEMBL
Match: C6SVG9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 2.004e-70 Identity = 133/159 (83.65%), Postives = 141/159 (88.68%), Query Frame = 1 Query: 142 KKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEXXXXXXXXXXXDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLK 618 KKL+DRLSTVIDAVNDRKLPPELRGQR+NVRSETD+INVVEQRIWH+MEEG+FE DTNP ADPAEDTL+RILSKN APEWVELNKEIRS+ISEWR SLKKAWA KCSGDHS WVESSEALK QL+EINDKVFRYNLIVPFGRQMFGLK Sbjct: 47 KKLMDRLSTVIDAVNDRKLPPELRGQRSNVRSETDIINVVEQRIWHTMEEGKFENLPGKGKPLKLDTNPRADPAEDTLHRILSKNGYAPEWVELNKEIRSKISEWRKSLKKAWATKCSGDHSEWVESSEALKSQLREINDKVFRYNLIVPFGRQMFGLK 205
BLAST of Ca_19078 vs. TrEMBL
Match: K4D416_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc10g085820.1 PE=4 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 2.894e-69 Identity = 125/173 (72.25%), Postives = 147/173 (84.97%), Query Frame = 1 Query: 130 KPDNKKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEXXXXXXXXXXXDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 648 K DNKK+ DRLS VID VNDRKLPPELRGQR+ VRSETD+INVVEQRIWHSMEEGQFE +TNPHADPAEDTLYRILS+N+CAPEWVELNKEIR R+ EWR +LK+AW ++ S D S+W+E+S++LKLQ+++IN+KVFRYNLIVPFGRQM GLKWEKE+ L+E Sbjct: 49 KTDNKKMTDRLSGVIDVVNDRKLPPELRGQRDAVRSETDIINVVEQRIWHSMEEGQFENLPGKGKPLDLNTNPHADPAEDTLYRILSRNKCAPEWVELNKEIRDRVVEWRSALKRAWTHQGSVDDSIWIEASDSLKLQIRDINNKVFRYNLIVPFGRQMLGLKWEKEMDRLKE 221
BLAST of Ca_19078 vs. TrEMBL
Match: B9IFT2_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_257136 PE=4 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 8.419e-69 Identity = 125/165 (75.76%), Postives = 140/165 (84.85%), Query Frame = 1 Query: 154 DRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEXXXXXXXXXXXDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 648 +RLS VIDAVNDRKLPPELRGQRN+VRSETD++NVVEQRIWHSMEEGQFE TN HADPAEDTLYRILSKN CAPEWVELNKEIR +ISEWR++LKKAW +KC+GDHS W+E SE L++QL+ IN+KVFRYNLIVPFGRQMFGLKWEKE+ E Sbjct: 9 ERLSAVIDAVNDRKLPPELRGQRNSVRSETDIMNVVEQRIWHSMEEGQFENLPGRGKPLNLSTNSHADPAEDTLYRILSKNGCAPEWVELNKEIRRQISEWRLALKKAWMSKCNGDHSKWIEGSEILQVQLRHINNKVFRYNLIVPFGRQMFGLKWEKELDRARE 173
BLAST of Ca_19078 vs. TrEMBL
Match: M1AGB6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400008599 PE=4 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 5.457e-68 Identity = 124/173 (71.68%), Postives = 146/173 (84.39%), Query Frame = 1 Query: 130 KPDNKKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEXXXXXXXXXXXDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 648 K +NKK+ DRLS VID VNDRKLPPELRGQR+ VRSETD+INVVEQRIWHSMEEGQFE +TNPHADPAEDTLYRILS+N+CAPEWVELNKEIR+R+ EW+ +LK+AW ++ S D S W+E+SE LKLQ+++IN+KVFRYNLIVPFGRQM GLKWEKE+ L+E Sbjct: 49 KTNNKKMTDRLSGVIDVVNDRKLPPELRGQRDAVRSETDIINVVEQRIWHSMEEGQFENLPGKGKPLDLNTNPHADPAEDTLYRILSRNKCAPEWVELNKEIRNRVVEWKSALKRAWTHRGSVDDSEWIEASEFLKLQIRDINNKVFRYNLIVPFGRQMLGLKWEKEMDRLKE 221
BLAST of Ca_19078 vs. TrEMBL
Match: D7TIW7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g04460 PE=4 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 3.660e-64 Identity = 119/173 (68.79%), Postives = 141/173 (81.50%), Query Frame = 1 Query: 130 KPDNKKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEXXXXXXXXXXXDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 648 KP+ KK LS VIDAV +RKLPPELRGQR+++RSETD+IN+ EQRIW SM+EGQFE NPHADPAEDTLYRILSKN CAPEWVELNKEIR++++ WR +LKKAWAN+C+ S W+ES +ALKLQ+ +IN+KVFRYNLIVPFGRQMFGLKWEKE++ LEE Sbjct: 21 KPE-KKAPHHLSAVIDAVKERKLPPELRGQRSSLRSETDIINIAEQRIWQSMKEGQFENLPGKGKPLDLSDNPHADPAEDTLYRILSKNGCAPEWVELNKEIRTQVNGWRSALKKAWANRCNQSDSQWIESCKALKLQMSDINNKVFRYNLIVPFGRQMFGLKWEKEVARLEE 192
BLAST of Ca_19078 vs. TrEMBL
Match: M0U7M0_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 3.099e-63 Identity = 116/167 (69.46%), Postives = 135/167 (80.84%), Query Frame = 1 Query: 145 KLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEXXXXXXXXXXXDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLE 645 KL RLS+V+DA+N+RKLPPELRG+ N +RSETD++NVVEQRIWHSMEEG FE + NPH DPAEDTLYRILS+N CAPEWVELNKEIRS+I+EWR++LKKAWANK + S W + SE LK Q+ +INDKV RYN IVPFGRQMFGLKWEKEI+ LE Sbjct: 84 KLPHRLSSVVDAINERKLPPELRGRGNAIRSETDIVNVVEQRIWHSMEEGHFENLPGKGRPLNLNPNPHVDPAEDTLYRILSRNGCAPEWVELNKEIRSKITEWRLALKKAWANKSDHEDSKWQDDSEILKAQMHDINDKVLRYNFIVPFGRQMFGLKWEKEIAKLE 250
BLAST of Ca_19078 vs. TrEMBL
Match: Q94F48_ARATH (AT5g03560/F12E4 OS=Arabidopsis thaliana GN=AT5G03560 PE=2 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 5.844e-62 Identity = 120/173 (69.36%), Postives = 134/173 (77.46%), Query Frame = 1 Query: 130 KPDNKKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEXXXXXXXXXXXDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 648 K KK +R S VIDAV+DRKLPPELRG+R+ VRSETD+INVVEQRIWHSMEEG FE TNPHADPAEDTLYRIL+KN APEWVELNKEIR++ EWR+SLKKAW K D S W E S+ LK +LK+IN+ VFRYNLIVPFGRQMFGLKWEKEI L+E Sbjct: 69 KRKEKKTTERFSAVIDAVHDRKLPPELRGRRDFVRSETDIINVVEQRIWHSMEEGHFENLPGKGKPLNLHTNPHADPAEDTLYRILNKNGFAPEWVELNKEIRNKAKEWRVSLKKAWTMKLEEDQSGWEERSDLLKNELKQINNMVFRYNLIVPFGRQMFGLKWEKEIDRLKE 241
BLAST of Ca_19078 vs. DB:Swiss
Match: DJC28_MOUSE (DnaJ homolog subfamily C member 28 OS=Mus musculus OX=10090 GN=Dnajc28 PE=1 SV=2) HSP 1 Score: 54.299 bits (129), Expect = 1.828e-7 Identity = 48/137 (35.04%), Postives = 71/137 (51.82%), Query Frame = 1 Query: 256 VVEQRIWHSMEEGQFEXXXXXXXXXXXDTN-PHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWR----MSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVP-FGRQMFGLKWEKEISYLEE 648 +VE I SM +G F+ L GKGKPLK + + DP L RIL N PEW+ + KEI+ I + R MS KK + W + E + +++++N ++ +NLIVP RQ +KEI ++E Sbjct: 203 LVEDLIQESMAKGDFDNLSGKGKPLKKFSGCSYIDPMTHNLNRILIDNGYQPEWILMQKEIKDTIEQLREALLMSRKKLGNPLSPTEQKQWAQVCEQFQEKIRKLNKRINDFNLIVPILTRQKVHFDAQKEIIRVQE 339 The following BLAST results are available for this feature:
BLAST of Ca_19078 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot) Total hits: 1
BLAST of Ca_19078 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_19078 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_19078_v1.0_kabuli ID=Ca_19078_v1.0_kabuli; Name=Ca_19078; organism=Cicer arietinum; type=mRNA; length=651bpback to top protein sequence of Ca_19078_v1.0_kabuli >Ca_19078_v1.0_kabuli ID=Ca_19078_v1.0_kabuli; Name=Ca_19078_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=216bpback to top mRNA from alignment at Ca4:21737391..21739175- Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_19078_v1.0_kabuli ID=Ca_19078_v1.0_kabuli; Name=Ca_19078; organism=Cicer arietinum; type=mRNA; length=1785bp; location=Sequence derived from: Ca4:21737391..21739175- (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca4:21737391..21739175- >Ca_19078_v1.0_kabuli ID=Ca_19078_v1.0_kabuli; Name=Ca_19078; organism=Cicer arietinum; type=CDS; length=651bp; location=Sequence derived from: Ca4:21737391..21739175- (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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