Ca_19078, Ca_19078_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_19078
Unique NameCa_19078_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length651
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca4chromosomeCa4:21737391..21739175 -Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR258Pisum sativum Cameor genome v1aPisum sativum
capsR288Pisum sativum Cameor genome v1aPisum sativum
capsR347Pisum sativum Cameor genome v1aPisum sativum
cavuR252Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR264Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR303Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR302Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR389Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0453Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0519Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0161Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0282Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0695Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0903Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1204Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL387Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR254Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR256Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR283Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR295Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR320Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR294Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR333Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR342Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR292Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR344Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR287Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR367Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR355Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR393Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR397Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR237Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR285Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR131Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL074Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL362Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL375Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL468Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR292Cicer arietinum
cacarR308Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
rna-KK1_006370Cajanus cajan Asha genome v1.0Cajanus cajan
Psat6g077160.2Pisum sativum Cameor genome v1aPisum sativum
Vfaba.Tiffany.R1.3g035840.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-TanjilR_10570Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004497517.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_19078-CDS1Ca_19078-CDS1Cicer arietinumCDS
Ca_19078-CDS2Ca_19078-CDS2Cicer arietinumCDS
Ca_19078-CDS3Ca_19078-CDS3Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_19078_v1.0_kabuliCa_19078_v1.0_kabuliCicer arietinumpolypeptide


Homology
BLAST of Ca_19078 vs. SwissProt
Match: DJC28_MOUSE (DnaJ homolog subfamily C member 28 OS=Mus musculus GN=Dnajc28 PE=2 SV=2)

HSP 1 Score: 54.6842 bits (130), Expect = 5.233e-7
Identity = 40/137 (29.20%), Postives = 63/137 (45.99%), Query Frame = 1
Query:  256 VVEQRIWHSMEEGQFEXXXXXXXXXXXDTN-PHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWR----MSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVP-FGRQMFGLKWEKEISYLEE 648
            +VE  I  SM +G F+            +   + DP    L RIL  N   PEW+ + KEI+  I + R    MS KK        +   W +  E  + +++++N ++  +NLIVP   RQ      +KEI  ++E
Sbjct:  203 LVEDLIQESMAKGDFDNLSGKGKPLKKFSGCSYIDPMTHNLNRILIDNGYQPEWILMQKEIKDTIEQLREALLMSRKKLGNPLSPTEQKQWAQVCEQFQEKIRKLNKRINDFNLIVPILTRQKVHFDAQKEIIRVQE 339          
BLAST of Ca_19078 vs. TrEMBL
Match: I1LZC4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 8.974e-79
Identity = 144/169 (85.21%), Postives = 150/169 (88.76%), Query Frame = 1
Query:  142 KKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEXXXXXXXXXXXDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 648
            KKL DRLS+VIDAVNDRKLPPELRGQ NNVRSETD+INVVEQRIWHSMEEGQFE           DTNPHADPAEDTLYRILSKN CAPEWVELNKEIRS+ISEWR SLKKAWA KCSGDHS WVES+EALK QL+EINDKVFRYNLIVPFGRQMFGLKWEKE+ YLEE
Sbjct:   43 KKLTDRLSSVIDAVNDRKLPPELRGQHNNVRSETDMINVVEQRIWHSMEEGQFENLPGKGKPLKLDTNPHADPAEDTLYRILSKNGCAPEWVELNKEIRSKISEWRKSLKKAWATKCSGDHSEWVESTEALKSQLREINDKVFRYNLIVPFGRQMFGLKWEKELGYLEE 211          
BLAST of Ca_19078 vs. TrEMBL
Match: I1L947_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 1.296e-77
Identity = 143/169 (84.62%), Postives = 151/169 (89.35%), Query Frame = 1
Query:  142 KKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEXXXXXXXXXXXDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 648
            KKL+DRLSTVIDAVNDRKLPPELRGQR+NVRSETD+INVVEQRIWH+MEEG+FE           DTNPHADPAEDTLYRILSKN  APEWVELNKEIRS+ISEWR SLKKAWA KCSGDHS WVESSEALK QL+EINDKVFRYNLIVPFGRQMFGLKWEKE+ YLEE
Sbjct:   47 KKLMDRLSTVIDAVNDRKLPPELRGQRSNVRSETDIINVVEQRIWHTMEEGKFENLPGKGKPLKLDTNPHADPAEDTLYRILSKNGYAPEWVELNKEIRSKISEWRKSLKKAWATKCSGDHSEWVESSEALKSQLREINDKVFRYNLIVPFGRQMFGLKWEKELGYLEE 215          
BLAST of Ca_19078 vs. TrEMBL
Match: G7IA78_MEDTR (DnaJ homolog subfamily C member OS=Medicago truncatula GN=MTR_1g062250 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 4.609e-75
Identity = 143/173 (82.66%), Postives = 147/173 (84.97%), Query Frame = 1
Query:  130 KPDNKKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEXXXXXXXXXXXDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 648
            KPD KKL DRLS VIDA NDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFE           DTNPHADPAEDTLYRILSKN CAPEWVELNKEIR RISEWR SLKKA ANKCS D S+WV SS+ALK QLKEINDKVFRYNLIVPFGRQM GLKWEKE+  L+E
Sbjct:   41 KPDKKKLGDRLSAVIDAANDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFENLPGKGKPLKLDTNPHADPAEDTLYRILSKNGCAPEWVELNKEIRFRISEWRKSLKKASANKCSEDQSMWVGSSQALKSQLKEINDKVFRYNLIVPFGRQMNGLKWEKELGNLDE 213          
BLAST of Ca_19078 vs. TrEMBL
Match: C6SVG9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 2.004e-70
Identity = 133/159 (83.65%), Postives = 141/159 (88.68%), Query Frame = 1
Query:  142 KKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEXXXXXXXXXXXDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLK 618
            KKL+DRLSTVIDAVNDRKLPPELRGQR+NVRSETD+INVVEQRIWH+MEEG+FE           DTNP ADPAEDTL+RILSKN  APEWVELNKEIRS+ISEWR SLKKAWA KCSGDHS WVESSEALK QL+EINDKVFRYNLIVPFGRQMFGLK
Sbjct:   47 KKLMDRLSTVIDAVNDRKLPPELRGQRSNVRSETDIINVVEQRIWHTMEEGKFENLPGKGKPLKLDTNPRADPAEDTLHRILSKNGYAPEWVELNKEIRSKISEWRKSLKKAWATKCSGDHSEWVESSEALKSQLREINDKVFRYNLIVPFGRQMFGLK 205          
BLAST of Ca_19078 vs. TrEMBL
Match: K4D416_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc10g085820.1 PE=4 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 2.894e-69
Identity = 125/173 (72.25%), Postives = 147/173 (84.97%), Query Frame = 1
Query:  130 KPDNKKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEXXXXXXXXXXXDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 648
            K DNKK+ DRLS VID VNDRKLPPELRGQR+ VRSETD+INVVEQRIWHSMEEGQFE           +TNPHADPAEDTLYRILS+N+CAPEWVELNKEIR R+ EWR +LK+AW ++ S D S+W+E+S++LKLQ+++IN+KVFRYNLIVPFGRQM GLKWEKE+  L+E
Sbjct:   49 KTDNKKMTDRLSGVIDVVNDRKLPPELRGQRDAVRSETDIINVVEQRIWHSMEEGQFENLPGKGKPLDLNTNPHADPAEDTLYRILSRNKCAPEWVELNKEIRDRVVEWRSALKRAWTHQGSVDDSIWIEASDSLKLQIRDINNKVFRYNLIVPFGRQMLGLKWEKEMDRLKE 221          
BLAST of Ca_19078 vs. TrEMBL
Match: B9IFT2_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_257136 PE=4 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 8.419e-69
Identity = 125/165 (75.76%), Postives = 140/165 (84.85%), Query Frame = 1
Query:  154 DRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEXXXXXXXXXXXDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 648
            +RLS VIDAVNDRKLPPELRGQRN+VRSETD++NVVEQRIWHSMEEGQFE            TN HADPAEDTLYRILSKN CAPEWVELNKEIR +ISEWR++LKKAW +KC+GDHS W+E SE L++QL+ IN+KVFRYNLIVPFGRQMFGLKWEKE+    E
Sbjct:    9 ERLSAVIDAVNDRKLPPELRGQRNSVRSETDIMNVVEQRIWHSMEEGQFENLPGRGKPLNLSTNSHADPAEDTLYRILSKNGCAPEWVELNKEIRRQISEWRLALKKAWMSKCNGDHSKWIEGSEILQVQLRHINNKVFRYNLIVPFGRQMFGLKWEKELDRARE 173          
BLAST of Ca_19078 vs. TrEMBL
Match: M1AGB6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400008599 PE=4 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 5.457e-68
Identity = 124/173 (71.68%), Postives = 146/173 (84.39%), Query Frame = 1
Query:  130 KPDNKKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEXXXXXXXXXXXDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 648
            K +NKK+ DRLS VID VNDRKLPPELRGQR+ VRSETD+INVVEQRIWHSMEEGQFE           +TNPHADPAEDTLYRILS+N+CAPEWVELNKEIR+R+ EW+ +LK+AW ++ S D S W+E+SE LKLQ+++IN+KVFRYNLIVPFGRQM GLKWEKE+  L+E
Sbjct:   49 KTNNKKMTDRLSGVIDVVNDRKLPPELRGQRDAVRSETDIINVVEQRIWHSMEEGQFENLPGKGKPLDLNTNPHADPAEDTLYRILSRNKCAPEWVELNKEIRNRVVEWKSALKRAWTHRGSVDDSEWIEASEFLKLQIRDINNKVFRYNLIVPFGRQMLGLKWEKEMDRLKE 221          
BLAST of Ca_19078 vs. TrEMBL
Match: D7TIW7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g04460 PE=4 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 3.660e-64
Identity = 119/173 (68.79%), Postives = 141/173 (81.50%), Query Frame = 1
Query:  130 KPDNKKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEXXXXXXXXXXXDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 648
            KP+ KK    LS VIDAV +RKLPPELRGQR+++RSETD+IN+ EQRIW SM+EGQFE             NPHADPAEDTLYRILSKN CAPEWVELNKEIR++++ WR +LKKAWAN+C+   S W+ES +ALKLQ+ +IN+KVFRYNLIVPFGRQMFGLKWEKE++ LEE
Sbjct:   21 KPE-KKAPHHLSAVIDAVKERKLPPELRGQRSSLRSETDIINIAEQRIWQSMKEGQFENLPGKGKPLDLSDNPHADPAEDTLYRILSKNGCAPEWVELNKEIRTQVNGWRSALKKAWANRCNQSDSQWIESCKALKLQMSDINNKVFRYNLIVPFGRQMFGLKWEKEVARLEE 192          
BLAST of Ca_19078 vs. TrEMBL
Match: M0U7M0_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 3.099e-63
Identity = 116/167 (69.46%), Postives = 135/167 (80.84%), Query Frame = 1
Query:  145 KLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEXXXXXXXXXXXDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLE 645
            KL  RLS+V+DA+N+RKLPPELRG+ N +RSETD++NVVEQRIWHSMEEG FE           + NPH DPAEDTLYRILS+N CAPEWVELNKEIRS+I+EWR++LKKAWANK   + S W + SE LK Q+ +INDKV RYN IVPFGRQMFGLKWEKEI+ LE
Sbjct:   84 KLPHRLSSVVDAINERKLPPELRGRGNAIRSETDIVNVVEQRIWHSMEEGHFENLPGKGRPLNLNPNPHVDPAEDTLYRILSRNGCAPEWVELNKEIRSKITEWRLALKKAWANKSDHEDSKWQDDSEILKAQMHDINDKVLRYNFIVPFGRQMFGLKWEKEIAKLE 250          
BLAST of Ca_19078 vs. TrEMBL
Match: Q94F48_ARATH (AT5g03560/F12E4 OS=Arabidopsis thaliana GN=AT5G03560 PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 5.844e-62
Identity = 120/173 (69.36%), Postives = 134/173 (77.46%), Query Frame = 1
Query:  130 KPDNKKLVDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQFEXXXXXXXXXXXDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGRQMFGLKWEKEISYLEE 648
            K   KK  +R S VIDAV+DRKLPPELRG+R+ VRSETD+INVVEQRIWHSMEEG FE            TNPHADPAEDTLYRIL+KN  APEWVELNKEIR++  EWR+SLKKAW  K   D S W E S+ LK +LK+IN+ VFRYNLIVPFGRQMFGLKWEKEI  L+E
Sbjct:   69 KRKEKKTTERFSAVIDAVHDRKLPPELRGRRDFVRSETDIINVVEQRIWHSMEEGHFENLPGKGKPLNLHTNPHADPAEDTLYRILNKNGFAPEWVELNKEIRNKAKEWRVSLKKAWTMKLEEDQSGWEERSDLLKNELKQINNMVFRYNLIVPFGRQMFGLKWEKEIDRLKE 241          
BLAST of Ca_19078 vs. DB:Swiss
Match: DJC28_MOUSE (DnaJ homolog subfamily C member 28 OS=Mus musculus OX=10090 GN=Dnajc28 PE=1 SV=2)

HSP 1 Score: 54.299 bits (129), Expect = 1.828e-7
Identity = 48/137 (35.04%), Postives = 71/137 (51.82%), Query Frame = 1
Query:  256 VVEQRIWHSMEEGQFEXXXXXXXXXXXDTN-PHADPAEDTLYRILSKNRCAPEWVELNKEIRSRISEWR----MSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVP-FGRQMFGLKWEKEISYLEE 648
            +VE  I  SM +G F+ L GKGKPLK  +   + DP    L RIL  N   PEW+ + KEI+  I + R    MS KK        +   W +  E  + +++++N ++  +NLIVP   RQ      +KEI  ++E
Sbjct:  203 LVEDLIQESMAKGDFDNLSGKGKPLKKFSGCSYIDPMTHNLNRILIDNGYQPEWILMQKEIKDTIEQLREALLMSRKKLGNPLSPTEQKQWAQVCEQFQEKIRKLNKRINDFNLIVPILTRQKVHFDAQKEIIRVQE 339          
The following BLAST results are available for this feature:
BLAST of Ca_19078 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
DJC28_MOUSE5.233e-729.20DnaJ homolog subfamily C member 28 OS=Mus musculus... [more]
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BLAST of Ca_19078 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
I1LZC4_SOYBN8.974e-7985.21Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I1L947_SOYBN1.296e-7784.62Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
G7IA78_MEDTR4.609e-7582.66DnaJ homolog subfamily C member OS=Medicago trunca... [more]
C6SVG9_SOYBN2.004e-7083.65Putative uncharacterized protein OS=Glycine max PE... [more]
K4D416_SOLLC2.894e-6972.25Uncharacterized protein OS=Solanum lycopersicum GN... [more]
B9IFT2_POPTR8.419e-6975.76Predicted protein (Fragment) OS=Populus trichocarp... [more]
M1AGB6_SOLTU5.457e-6871.68Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
D7TIW7_VITVI3.660e-6468.79Putative uncharacterized protein OS=Vitis vinifera... [more]
M0U7M0_MUSAM3.099e-6369.46Uncharacterized protein OS=Musa acuminata subsp. m... [more]
Q94F48_ARATH5.844e-6269.36AT5g03560/F12E4 OS=Arabidopsis thaliana GN=AT5G035... [more]

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BLAST of Ca_19078 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
DJC28_MOUSE1.828e-735.04DnaJ homolog subfamily C member 28 OS=Mus musculus... [more]
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InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018961DnaJ homologue, subfamily C, member 28, conserved domainPFAMPF09350DUF1992coord: 86..154
score: 8.2
NoneNo IPR availableSEGsegsegcoord: 14..43
score: NAcoord: 102..112
score
NoneNo IPR availableSEGsegsegcoord: 13..31
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_19078_v1.0_kabuli ID=Ca_19078_v1.0_kabuli; Name=Ca_19078; organism=Cicer arietinum; type=mRNA; length=651bp
ATGGGCTCGGCGACGTATCTTCGCCTTGAGAGATTTGGATCTCTCAATTT
GCTCTCCCTCCTCTGCTTGCAGAACTCTTCAGTTTCCACCGTCAGATTTT
GTTCATCGTCGTCGTCTTCCGGTAATTCTAAACCAGATAATAAGAAGCTA
GTTGATCGTCTTTCAACTGTAATTGACGCCGTTAATGATCGCAAACTTCC
TCCTGAACTTCGTGGCCAGCGCAACAATGTTAGGTCAGAAACTGACTTGA
TCAACGTTGTTGAGCAAAGAATATGGCATTCAATGGAAGAAGGCCAATTT
GAAAAATTGCCTGGGAAAGGCAAGCCACTAAAGCTTGACACAAATCCTCA
TGCGGATCCAGCTGAAGACACCTTATACAGAATCCTCTCGAAAAATAGAT
GTGCACCGGAGTGGGTCGAGCTTAACAAAGAGATAAGGTCTAGAATATCT
GAATGGAGGATGTCCTTGAAGAAAGCTTGGGCAAATAAATGCAGTGGAGA
TCACTCTGTGTGGGTTGAAAGTTCAGAGGCTTTGAAATTGCAGTTAAAAG
AAATTAATGATAAGGTATTTCGGTATAATCTCATTGTACCTTTTGGTCGG
CAAATGTTTGGCCTTAAGTGGGAGAAAGAGATCAGTTATTTAGAAGAATG
A
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protein sequence of Ca_19078_v1.0_kabuli

>Ca_19078_v1.0_kabuli ID=Ca_19078_v1.0_kabuli; Name=Ca_19078_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=216bp
MGSATYLRLERFGSLNLLSLLCLQNSSVSTVRFCSSSSSSGNSKPDNKKL
VDRLSTVIDAVNDRKLPPELRGQRNNVRSETDLINVVEQRIWHSMEEGQF
EKLPGKGKPLKLDTNPHADPAEDTLYRILSKNRCAPEWVELNKEIRSRIS
EWRMSLKKAWANKCSGDHSVWVESSEALKLQLKEINDKVFRYNLIVPFGR
QMFGLKWEKEISYLEE
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mRNA from alignment at Ca4:21737391..21739175-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_19078_v1.0_kabuli ID=Ca_19078_v1.0_kabuli; Name=Ca_19078; organism=Cicer arietinum; type=mRNA; length=1785bp; location=Sequence derived from: Ca4:21737391..21739175- (Cicer arietinum
ATGGGCTCGGCGACGTATCTTCGCCTTGAGAGATTTGGATCTCTCAATTT GCTCTCCCTCCTCTGCTTGCAGAACTCTTCAGTTTCCACCGTCAGATTTT GTTCATCGTCGTCGTCTTCCGGTAATTCTAAACCAGATAATAAGAAGCTA GTTGATCGTCTTTCAACTGTAATTGACGCCGTTAATGATCGCAAACTTCC TCCTGAACTTCGTGGCCAGCGCAACAATGTTAGGTATTGGACATACACAC AATTCCCTCTTTTACAATCACAAAATTAACTTTTTCTTTTATTCATATCG TCTCTTTCGCTTATTCGATGGATTCAAGTGCTTACTGAATACATGAAATT CTTTACTTTTTTACTCAAAATTATGGTTTTCATTCCTTGTCAAATATTAT TAACTGCCCACGATACTCTGTTAACATTTGTCAATTTATTCTGAATATGA AACCAAACGCATGTAATTAGAACTTCCAATATTTTATATGTATCTTTGTT TACAAGATTGAAGGTTCAAACTTTTTGGTCCACCAATTTGATGCTTAAAA ATCTCAAATATTGGTCAAATTCTATGACACCGACACGACACCAATATATT GATTACTTTCATTTAATTAGTTATGTCAGATTGTTGATGTGTCAGTGTTG TATTCGTGCCAGTATTTGTGTTTGATAGGTCAAATTAATTATTTTTAGGA TGTTCATCAGTGAAACTTTAGCCTTTAGACCCGTCAGAGATTAATTTGAT CGATATGTATAATATTTGATGACCAAATTAGTAAATAGTAATTATTTTAC CTCAGTTGGGGTCTTTATATATATTAATATGTAAGAAATGGATTGACACC AGGGAAACTCTAGTTGCACCAAAACTACCAAATGCACCAGTGCTATGCCC TTAGTATCAGTATGTATATGGTCGCTTTTCATATCTTCCCAATGGTTGGT TAATAAAATTGCCAACGGGTTCAGGGATCTGTGAACTTGAGGCACTGGTT GCTATTGGCTGTCATGTCTACCAATAATGCCATGTTAGTACGTAACATAA GATGTATATGTTTTGATTATAAATGAGAATATGACAGAACATTAAAAAAA GTGATATATCACCAAGTTAATAGTACAGTATAATTGGTCTTGCTTGTATA CAATGCTTTTGATGATTTGGTGTTTGTTTTGTCAATTGTCATCATCATCT GGTTTTGTTTAACACAAGTTTGGCTGTTAGACAGGTCAGAAACTGACTTG ATCAACGTTGTTGAGCAAAGAATATGGCATTCAATGGAAGAAGGCCAATT TGAAAAATTGCCTGGGAAAGGCAAGCCACTAAAGCTTGACACAAATCCTC ATGCGGATCCAGCTGAAGACACCTTATACAGAATCCTCTCGAAAAATAGA TGTGCACCGGAGTGGGTCGAGCTTAACAAAGAGATAAGGTCTAGAATATC TGAATGGAGGATGTCCTTGAAGAAAGCTTGGGCAAATAAATGCAGTGGAG ATCACTCTGTGTGGGTTGAAAGTTCAGAGGCTTTGAAATTGCAGTTAAAA GAAATTAATGATAAGGTGAGCTGGTTGGGTCATTTTGTCGTGCTAATGTT TGCAGGAAATTGGAGAACTGAATATGATTCTTGCAAGTATTGAATTATGT CTTTGATGGTTGTAATGCAGTTTTAATACATCTCTTTTTCTTTTGCAGGT ATTTCGGTATAATCTCATTGTACCTTTTGGTCGGCAAATGTTTGGCCTTA AGTGGGAGAAAGAGATCAGTTATTTAGAAGAATGA
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Coding sequence (CDS) from alignment at Ca4:21737391..21739175-

>Ca_19078_v1.0_kabuli ID=Ca_19078_v1.0_kabuli; Name=Ca_19078; organism=Cicer arietinum; type=CDS; length=651bp; location=Sequence derived from: Ca4:21737391..21739175- (Cicer arietinum
ATGGGCTCGGCGACGTATCTTCGCCTTGAGAGATTTGGATCTCTCAATTT
GCTCTCCCTCCTCTGCTTGCAGAACTCTTCAGTTTCCACCGTCAGATTTT
GTTCATCGTCGTCGTCTTCCGGTAATTCTAAACCAGATAATAAGAAGCTA
GTTGATCGTCTTTCAACTGTAATTGACGCCGTTAATGATCGCAAACTTCC
TCCTGAACTTCGTGGCCAGCGCAACAATGTTAGGTCAGAAACTGACTTGA
TCAACGTTGTTGAGCAAAGAATATGGCATTCAATGGAAGAAGGCCAATTT
GAAAAATTGCCTGGGAAAGGCAAGCCACTAAAGCTTGACACAAATCCTCA
TGCGGATCCAGCTGAAGACACCTTATACAGAATCCTCTCGAAAAATAGAT
GTGCACCGGAGTGGGTCGAGCTTAACAAAGAGATAAGGTCTAGAATATCT
GAATGGAGGATGTCCTTGAAGAAAGCTTGGGCAAATAAATGCAGTGGAGA
TCACTCTGTGTGGGTTGAAAGTTCAGAGGCTTTGAAATTGCAGTTAAAAG
AAATTAATGATAAGGTATTTCGGTATAATCTCATTGTACCTTTTGGTCGG
CAAATGTTTGGCCTTAAGTGGGAGAAAGAGATCAGTTATTTAGAAGAATG
A
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR018961DnaJ_homolog_subfam-C_membr-28