Ca_20125, Ca_20125_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_20125 vs. TrEMBL
Match: C6ZS09_SOYBN (Calcineurin-like phosphoesterase OS=Glycine max PE=2 SV=1) HSP 1 Score: 325.479 bits (833), Expect = 5.402e-87 Identity = 158/197 (80.20%), Postives = 171/197 (86.80%), Query Frame = 1 Query: 1 MHLQGRRWSGAIKAKFNVAKGTEYQGSIYDARPTFHSYGVPHGSADLVKAVPDEHKKFLADLVWVHEEFLFRLQTDVMFYQDDVLMNTDDGVKCCKLIAVHAGLEKGVDVKEQMKILKARDTRIPKLQPLSGRKNVWDIPEELSASPTIIVSGHHAKLHVEGYRLIIDEGGGYQDKPVAAIVLPSMTIIRDTDVLAK 591 MHLQGRRWSG IK KFN KGTEYQGSIYDA PTF SYGVPHGSADLVKAVPD+HKKFLADLVWVHEE DDV +NTDDGVKCCKLIAVHAGLEKG DVKEQ+K+LKARDTR+PK++ LSGRK+VWDIPEEL+ASP I+VSGHHAKLHVEG RLIIDEGGGY+D+PVAAI+LPSM IIRDTD LAK Sbjct: 128 MHLQGRRWSGKIKVKFNTVKGTEYQGSIYDAGPTFESYGVPHGSADLVKAVPDDHKKFLADLVWVHEE-------------DDVFVNTDDGVKCCKLIAVHAGLEKGKDVKEQLKLLKARDTRVPKVEALSGRKSVWDIPEELTASPAIVVSGHHAKLHVEGLRLIIDEGGGYKDRPVAAIILPSMKIIRDTDELAK 311
BLAST of Ca_20125 vs. TrEMBL
Match: F6HKI9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g03720 PE=2 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 4.290e-76 Identity = 139/197 (70.56%), Postives = 160/197 (81.22%), Query Frame = 1 Query: 1 MHLQGRRWSGAIKAKFNVAKGTEYQGSIYDARPTFHSYGVPHGSADLVKAVPDEHKKFLADLVWVHEEFLFRLQTDVMFYQDDVLMNTDDGVKCCKLIAVHAGLEKGVDVKEQMKILKARDTRIPKLQPLSGRKNVWDIPEELSASPTIIVSGHHAKLHVEGYRLIIDEGGGYQDKPVAAIVLPSMTIIRDTDVLAK 591 MHLQGRRW+G IK KFNV KGTEYQGSIYDAR TF SYGVPHGSADLVKAVPDEHKKFLAD+VWVHEE DDV + T++G+K CKLIAVHAGLE+ V EQ+K LKA+DTR+PK+ PLSGR +VW+IP+EL+ PTI+VSGHH KLH+EG RLIIDEGGG + PVAA+VLPSM ++RDTD LAK Sbjct: 138 MHLQGRRWAGTIKVKFNVTKGTEYQGSIYDARLTFESYGVPHGSADLVKAVPDEHKKFLADMVWVHEE-------------DDVCIQTEEGIKHCKLIAVHAGLERDEAVDEQLKTLKAKDTRVPKVGPLSGRASVWEIPKELTEKPTIVVSGHHGKLHIEGLRLIIDEGGGLEQNPVAAVVLPSMQVVRDTDKLAK 321
BLAST of Ca_20125 vs. TrEMBL
Match: A5B2R8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043402 PE=2 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 1.630e-75 Identity = 138/197 (70.05%), Postives = 159/197 (80.71%), Query Frame = 1 Query: 1 MHLQGRRWSGAIKAKFNVAKGTEYQGSIYDARPTFHSYGVPHGSADLVKAVPDEHKKFLADLVWVHEEFLFRLQTDVMFYQDDVLMNTDDGVKCCKLIAVHAGLEKGVDVKEQMKILKARDTRIPKLQPLSGRKNVWDIPEELSASPTIIVSGHHAKLHVEGYRLIIDEGGGYQDKPVAAIVLPSMTIIRDTDVLAK 591 MHLQGRRW+G IK KFNV KGTEYQGSIYDAR TF SYGVPHGSADLVKAVPDEHKKFLAD+VWVHEE DDV + T++G+K CKLIAVHAGLE+ V EQ+K LKA+DTR+PK+ PLSGR +VW+IP+EL+ PTI+VSGHH KLH+EG RLIIDEGGG + PVAA+VLPSM ++RDTD L K Sbjct: 138 MHLQGRRWAGTIKVKFNVTKGTEYQGSIYDARLTFESYGVPHGSADLVKAVPDEHKKFLADMVWVHEE-------------DDVCIQTEEGIKHCKLIAVHAGLERDEAVDEQLKXLKAKDTRVPKVGPLSGRASVWEIPKELTEKPTIVVSGHHGKLHIEGLRLIIDEGGGLEQNPVAAVVLPSMQVVRDTDKLXK 321
BLAST of Ca_20125 vs. TrEMBL
Match: M5VRT4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015436mg PE=4 SV=1) HSP 1 Score: 285.804 bits (730), Expect = 4.743e-75 Identity = 133/196 (67.86%), Postives = 165/196 (84.18%), Query Frame = 1 Query: 1 MHLQGRRWSGAIKAKFNVAKGTEYQGSIYDARPTFHSYGVPHGSADLVKAVPDEHKKFLADLVWVHEEFLFRLQTDVMFYQDDVLMNTDDGVKCCKLIAVHAGLEKGVDVKEQMKILKARDTRIPKLQPLSGRKNVWDIPEELSASPTIIVSGHHAKLHVEGYRLIIDEGGGYQDKPVAAIVLPSMTIIRDTDVLA 588 MHLQGRRW+G++K KFN AK T+Y+GSIYDA PTF SYGVPHGSADLVKAVPDEHKKFLAD+VWVHEE DDV + T+DG+K CKLIAVHAGLEK DVK+Q++ L+ARDTR+P+++ LS R+NVW+IP+EL+ +PT++VSGHH KLH+EG RLIIDEGGG +++PVAA+VLP+M I+R+TDVLA Sbjct: 132 MHLQGRRWAGSMKDKFNAAKNTQYKGSIYDAEPTFASYGVPHGSADLVKAVPDEHKKFLADMVWVHEE-------------DDVCVETEDGIKHCKLIAVHAGLEKDKDVKQQLEFLRARDTRVPRIEALSDRQNVWNIPKELTENPTVVVSGHHGKLHIEGLRLIIDEGGGKEERPVAAVVLPTMKIVRNTDVLA 314
BLAST of Ca_20125 vs. TrEMBL
Match: I1L989_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 282.337 bits (721), Expect = 5.244e-74 Identity = 146/211 (69.19%), Postives = 161/211 (76.30%), Query Frame = 1 Query: 7 LQGRRWSGAIKAKFNVAKGTEYQGSIYDARPTFHSYGVPHGSADLVKAVPDEHKKFLADLVWVHEEFLFRLQTDVMFYQDDVLMNTDDGVKCCKLIAVHAGLEKGVDVKEQMKILKARDTRIPKLQPLSGRKNVWDIPE----------ELSASPTIIVSG------HHAKLHVEGYRLIIDEGGGYQDKPVAAIVLPSMTIIRDTDVLAK 591 LQGRRWSG IK KFN KGTEYQGSIYDA PTF SYGV H SADLVKAVPD+HKKFLADLVWVHEE DDV +NTDDGVKCCKLIAVHAGLEKG D+KEQ+K+LKARDTR+PK++ LSGRK+VWDIPE ++S+ G HH KLHVEG RLIIDEGGGY+D+PVAAI+LPSM IIRDTDVLAK Sbjct: 77 LQGRRWSGKIKVKFNTVKGTEYQGSIYDAGPTFESYGVLHASADLVKAVPDDHKKFLADLVWVHEE-------------DDVFVNTDDGVKCCKLIAVHAGLEKGKDLKEQLKLLKARDTRVPKVEALSGRKSVWDIPEKTYILRIKYFKVSSLFHFFRKGQKHLIRHHGKLHVEGLRLIIDEGGGYKDRPVAAIILPSMKIIRDTDVLAK 274
BLAST of Ca_20125 vs. TrEMBL
Match: B9T793_RICCO (Hydrolase, putative OS=Ricinus communis GN=RCOM_0023050 PE=4 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 3.399e-73 Identity = 131/193 (67.88%), Postives = 157/193 (81.35%), Query Frame = 1 Query: 1 MHLQGRRWSGAIKAKFNVAKGTEYQGSIYDARPTFHSYGVPHGSADLVKAVPDEHKKFLADLVWVHEEFLFRLQTDVMFYQDDVLMNTDDGVKCCKLIAVHAGLEKGVDVKEQMKILKARDTRIPKLQPLSGRKNVWDIPEELSASPTIIVSGHHAKLHVEGYRLIIDEGGGYQDKPVAAIVLPSMTIIRDTD 579 M+LQGRRW+G IK KFNVAKGTEY+GSIYDA PTF SYGVPHGSADL+K VPDEHKKFL D+VW+HEE +DV + ++G+K CKLIAVHAGLEKG +V+EQ+ LK +DTR+PK++ LSGRKNVWDIP+EL PTI+VSGHH KLH+EG RLIIDEGGG ++ PVAAI+LPSM ++RDTD Sbjct: 138 MYLQGRRWAGNIKVKFNVAKGTEYKGSIYDAGPTFESYGVPHGSADLIKVVPDEHKKFLVDMVWIHEEARL----------EDVCIENEEGMKHCKLIAVHAGLEKGKNVEEQLAFLKVKDTRVPKIEALSGRKNVWDIPKELVEKPTIVVSGHHGKLHIEGLRLIIDEGGGLENNPVAAILLPSMKLVRDTD 320
BLAST of Ca_20125 vs. TrEMBL
Match: K4CQU6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=ACI14 PE=4 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 7.572e-73 Identity = 132/197 (67.01%), Postives = 160/197 (81.22%), Query Frame = 1 Query: 1 MHLQGRRWSGAIKAKFNVAKGTEYQGSIYDARPTFHSYGVPHGSADLVKAVPDEHKKFLADLVWVHEEFLFRLQTDVMFYQDDVLMNTDDGVKCCKLIAVHAGLEKGVDVKEQMKILKARDTRIPKLQPLSGRKNVWDIPEELSASPTIIVSGHHAKLHVEGYRLIIDEGGGYQDKPVAAIVLPSMTIIRDTDVLAK 591 MHLQGRRW+G KFN KG +Y+GSIYDA PTF SYGVPHGSADL+KAVPDEHKKFLA+LVW+HEE DDV + T++G+K CKLIAVHAGLEK V++Q+ LKA+DTRIPK+ LSGRK+VW+IP+EL+ +PTIIVSGHHAKLH+EG RL+ID+GGG++D+PVAAIVLPS+ I+RDTD L K Sbjct: 132 MHLQGRRWAGNHTVKFNAVKGIDYKGSIYDAAPTFQSYGVPHGSADLMKAVPDEHKKFLANLVWIHEE-------------DDVTIKTEEGIKRCKLIAVHAGLEKNKSVEQQINTLKAKDTRIPKVAALSGRKDVWEIPQELTKTPTIIVSGHHAKLHIEGLRLVIDQGGGFEDQPVAAIVLPSLEIVRDTDHLVK 315
BLAST of Ca_20125 vs. TrEMBL
Match: M0ZSB3_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400002713 PE=4 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 6.410e-72 Identity = 131/197 (66.50%), Postives = 159/197 (80.71%), Query Frame = 1 Query: 1 MHLQGRRWSGAIKAKFNVAKGTEYQGSIYDARPTFHSYGVPHGSADLVKAVPDEHKKFLADLVWVHEEFLFRLQTDVMFYQDDVLMNTDDGVKCCKLIAVHAGLEKGVDVKEQMKILKARDTRIPKLQPLSGRKNVWDIPEELSASPTIIVSGHHAKLHVEGYRLIIDEGGGYQDKPVAAIVLPSMTIIRDTDVLAK 591 MHLQGRRW+G KFN KG +Y+GSIYDA PTF SYGVPHGSADL+K V DEHKKFLA+LVW+HEE DDV + T++G+K CKLIAVHAGLEK V++Q+K LKA+DTRIPK+ LSGRK+VW+IP+EL+ +PTIIVSGHHAKLH+EG RL+ID+GGG++D+PVAAIVLPS+ I+RDTD L K Sbjct: 132 MHLQGRRWAGNHTVKFNAVKGIDYKGSIYDAAPTFESYGVPHGSADLMKVVTDEHKKFLANLVWIHEE-------------DDVTIKTEEGIKRCKLIAVHAGLEKNKPVEQQIKTLKAKDTRIPKVAALSGRKDVWEIPQELTKTPTIIVSGHHAKLHIEGLRLVIDQGGGFEDQPVAAIVLPSLEIVRDTDHLVK 315
BLAST of Ca_20125 vs. TrEMBL
Match: Q3SC78_SOLLC (ACI14 OS=Solanum lycopersicum GN=ACI14 PE=2 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 1.865e-71 Identity = 129/193 (66.84%), Postives = 157/193 (81.35%), Query Frame = 1 Query: 1 MHLQGRRWSGAIKAKFNVAKGTEYQGSIYDARPTFHSYGVPHGSADLVKAVPDEHKKFLADLVWVHEEFLFRLQTDVMFYQDDVLMNTDDGVKCCKLIAVHAGLEKGVDVKEQMKILKARDTRIPKLQPLSGRKNVWDIPEELSASPTIIVSGHHAKLHVEGYRLIIDEGGGYQDKPVAAIVLPSMTIIRDTD 579 MHLQGRRW+G KFN +G +Y+GSIYDA PTF SYGVPHGSADL+KAVPDEHKKFLA+LVW+HEE DDV + T+ G+K CKLIAVHAGLEK V++Q+ LKA+DTRIPK+ LSGRK+VW+IP+EL+ +PTIIVSGHHAKLH+EG RL+ID+GGG++D+PVAAIVLPS+ I+RDTD Sbjct: 132 MHLQGRRWAGNHTVKFNAVRGIDYKGSIYDAAPTFQSYGVPHGSADLMKAVPDEHKKFLANLVWIHEE-------------DDVTIKTEKGIKRCKLIAVHAGLEKNKSVEQQINTLKAKDTRIPKVAALSGRKDVWEIPQELTKTPTIIVSGHHAKLHIEGLRLVIDQGGGFEDQPVAAIVLPSLEIVRDTD 311
BLAST of Ca_20125 vs. TrEMBL
Match: B9GPX7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_552139 PE=2 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 1.209e-70 Identity = 126/197 (63.96%), Postives = 157/197 (79.70%), Query Frame = 1 Query: 1 MHLQGRRWSGAIKAKFNVAKGTEYQGSIYDARPTFHSYGVPHGSADLVKAVPDEHKKFLADLVWVHEEFLFRLQTDVMFYQDDVLMNTDDGVKCCKLIAVHAGLEKGVDVKEQMKILKARDTRIPKLQPLSGRKNVWDIPEELSASPTIIVSGHHAKLHVEGYRLIIDEGGGYQDKPVAAIVLPSMTIIRDTDVLAK 591 MHLQGRRW+G IK +FN +KG EY+GSIYDA PTF SYGVPHGS+DL+KAVPD+HKKFLAD VWVHEE DDV + ++G++ CKLIA HAGLE+G +V EQ++ LKA++T +PK++ LSGRK VWDIP+EL+ P I+VSGHH KLH++G RLIIDEGGG+++KPVAAI LPSM ++RDTD L K Sbjct: 136 MHLQGRRWAGHIKVRFNTSKGIEYKGSIYDAGPTFTSYGVPHGSSDLLKAVPDDHKKFLADTVWVHEE-------------DDVCIEDEEGIRHCKLIAAHAGLEEGKNVGEQLRFLKAKETHVPKIEALSGRKTVWDIPKELTEKPIIVVSGHHGKLHIDGLRLIIDEGGGFENKPVAAIALPSMKLVRDTDNLTK 319 The following BLAST results are available for this feature:
BLAST of Ca_20125 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25 Position : 0 Zoom : x 1
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BLAST of Ca_20125 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_20125_v1.0_kabuli ID=Ca_20125_v1.0_kabuli; Name=Ca_20125; organism=Cicer arietinum; type=mRNA; length=594bpback to top protein sequence of Ca_20125_v1.0_kabuli >Ca_20125_v1.0_kabuli ID=Ca_20125_v1.0_kabuli; Name=Ca_20125_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=197bpback to top mRNA from alignment at Ca4:22289014..22290714- Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_20125_v1.0_kabuli ID=Ca_20125_v1.0_kabuli; Name=Ca_20125; organism=Cicer arietinum; type=mRNA; length=1701bp; location=Sequence derived from: Ca4:22289014..22290714- (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca4:22289014..22290714- >Ca_20125_v1.0_kabuli ID=Ca_20125_v1.0_kabuli; Name=Ca_20125; organism=Cicer arietinum; type=CDS; length=594bp; location=Sequence derived from: Ca4:22289014..22290714- (Cicer arietinumback to top |