Ca_20125, Ca_20125_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_20125
Unique NameCa_20125_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length594
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca4chromosomeCa4:22289014..22290714 -Cicer arietinum CDC Frontier genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum CDC Frontier genome v1.02013-01-01
InterProScan analysis for kabuli C. arietinum unigenes2013-10-24
Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL2013-10-24
BLAST: C. arietinum CDC Frontier (kabuli), Swissprot2019-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR261Pisum sativum Cameor genome v1aPisum sativum
capsR288Pisum sativum Cameor genome v1aPisum sativum
cavuR252Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR303Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR302Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR389Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0453Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0512Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0695Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0902Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0903Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1131Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1204Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL387Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL408Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL497Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR256Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR283Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR294Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR342Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR292Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR344Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR287Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR355Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR362Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR397Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR237Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR285Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR120Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR131Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL362Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL375Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL468Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR272Cicer arietinum
cacarR292Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
rna-TanjilR_19708Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
evm.model.Chr07.2196Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
LR48_mrnaVigan02g084200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Psat6g080360.1Pisum sativum Cameor genome v1aPisum sativum
Va02G021540.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_014657843.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg1126.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-KK1_006473Cajanus cajan Asha genome v1.0Cajanus cajan
Psat06G0217600-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Phvul.007G222200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun07g068500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004497552.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_20125-CDS1Ca_20125-CDS1Cicer arietinumCDS
Ca_20125-CDS2Ca_20125-CDS2Cicer arietinumCDS
Ca_20125-CDS3Ca_20125-CDS3Cicer arietinumCDS
Ca_20125-CDS4Ca_20125-CDS4Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_20125_v1.0_kabuliCa_20125_v1.0_kabuliCicer arietinumpolypeptide


Homology
BLAST of Ca_20125 vs. TrEMBL
Match: C6ZS09_SOYBN (Calcineurin-like phosphoesterase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 5.402e-87
Identity = 158/197 (80.20%), Postives = 171/197 (86.80%), Query Frame = 1
Query:    1 MHLQGRRWSGAIKAKFNVAKGTEYQGSIYDARPTFHSYGVPHGSADLVKAVPDEHKKFLADLVWVHEEFLFRLQTDVMFYQDDVLMNTDDGVKCCKLIAVHAGLEKGVDVKEQMKILKARDTRIPKLQPLSGRKNVWDIPEELSASPTIIVSGHHAKLHVEGYRLIIDEGGGYQDKPVAAIVLPSMTIIRDTDVLAK 591
            MHLQGRRWSG IK KFN  KGTEYQGSIYDA PTF SYGVPHGSADLVKAVPD+HKKFLADLVWVHEE             DDV +NTDDGVKCCKLIAVHAGLEKG DVKEQ+K+LKARDTR+PK++ LSGRK+VWDIPEEL+ASP I+VSGHHAKLHVEG RLIIDEGGGY+D+PVAAI+LPSM IIRDTD LAK
Sbjct:  128 MHLQGRRWSGKIKVKFNTVKGTEYQGSIYDAGPTFESYGVPHGSADLVKAVPDDHKKFLADLVWVHEE-------------DDVFVNTDDGVKCCKLIAVHAGLEKGKDVKEQLKLLKARDTRVPKVEALSGRKSVWDIPEELTASPAIVVSGHHAKLHVEGLRLIIDEGGGYKDRPVAAIILPSMKIIRDTDELAK 311          
BLAST of Ca_20125 vs. TrEMBL
Match: F6HKI9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g03720 PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 4.290e-76
Identity = 139/197 (70.56%), Postives = 160/197 (81.22%), Query Frame = 1
Query:    1 MHLQGRRWSGAIKAKFNVAKGTEYQGSIYDARPTFHSYGVPHGSADLVKAVPDEHKKFLADLVWVHEEFLFRLQTDVMFYQDDVLMNTDDGVKCCKLIAVHAGLEKGVDVKEQMKILKARDTRIPKLQPLSGRKNVWDIPEELSASPTIIVSGHHAKLHVEGYRLIIDEGGGYQDKPVAAIVLPSMTIIRDTDVLAK 591
            MHLQGRRW+G IK KFNV KGTEYQGSIYDAR TF SYGVPHGSADLVKAVPDEHKKFLAD+VWVHEE             DDV + T++G+K CKLIAVHAGLE+   V EQ+K LKA+DTR+PK+ PLSGR +VW+IP+EL+  PTI+VSGHH KLH+EG RLIIDEGGG +  PVAA+VLPSM ++RDTD LAK
Sbjct:  138 MHLQGRRWAGTIKVKFNVTKGTEYQGSIYDARLTFESYGVPHGSADLVKAVPDEHKKFLADMVWVHEE-------------DDVCIQTEEGIKHCKLIAVHAGLERDEAVDEQLKTLKAKDTRVPKVGPLSGRASVWEIPKELTEKPTIVVSGHHGKLHIEGLRLIIDEGGGLEQNPVAAVVLPSMQVVRDTDKLAK 321          
BLAST of Ca_20125 vs. TrEMBL
Match: A5B2R8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043402 PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 1.630e-75
Identity = 138/197 (70.05%), Postives = 159/197 (80.71%), Query Frame = 1
Query:    1 MHLQGRRWSGAIKAKFNVAKGTEYQGSIYDARPTFHSYGVPHGSADLVKAVPDEHKKFLADLVWVHEEFLFRLQTDVMFYQDDVLMNTDDGVKCCKLIAVHAGLEKGVDVKEQMKILKARDTRIPKLQPLSGRKNVWDIPEELSASPTIIVSGHHAKLHVEGYRLIIDEGGGYQDKPVAAIVLPSMTIIRDTDVLAK 591
            MHLQGRRW+G IK KFNV KGTEYQGSIYDAR TF SYGVPHGSADLVKAVPDEHKKFLAD+VWVHEE             DDV + T++G+K CKLIAVHAGLE+   V EQ+K LKA+DTR+PK+ PLSGR +VW+IP+EL+  PTI+VSGHH KLH+EG RLIIDEGGG +  PVAA+VLPSM ++RDTD L K
Sbjct:  138 MHLQGRRWAGTIKVKFNVTKGTEYQGSIYDARLTFESYGVPHGSADLVKAVPDEHKKFLADMVWVHEE-------------DDVCIQTEEGIKHCKLIAVHAGLERDEAVDEQLKXLKAKDTRVPKVGPLSGRASVWEIPKELTEKPTIVVSGHHGKLHIEGLRLIIDEGGGLEQNPVAAVVLPSMQVVRDTDKLXK 321          
BLAST of Ca_20125 vs. TrEMBL
Match: M5VRT4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015436mg PE=4 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 4.743e-75
Identity = 133/196 (67.86%), Postives = 165/196 (84.18%), Query Frame = 1
Query:    1 MHLQGRRWSGAIKAKFNVAKGTEYQGSIYDARPTFHSYGVPHGSADLVKAVPDEHKKFLADLVWVHEEFLFRLQTDVMFYQDDVLMNTDDGVKCCKLIAVHAGLEKGVDVKEQMKILKARDTRIPKLQPLSGRKNVWDIPEELSASPTIIVSGHHAKLHVEGYRLIIDEGGGYQDKPVAAIVLPSMTIIRDTDVLA 588
            MHLQGRRW+G++K KFN AK T+Y+GSIYDA PTF SYGVPHGSADLVKAVPDEHKKFLAD+VWVHEE             DDV + T+DG+K CKLIAVHAGLEK  DVK+Q++ L+ARDTR+P+++ LS R+NVW+IP+EL+ +PT++VSGHH KLH+EG RLIIDEGGG +++PVAA+VLP+M I+R+TDVLA
Sbjct:  132 MHLQGRRWAGSMKDKFNAAKNTQYKGSIYDAEPTFASYGVPHGSADLVKAVPDEHKKFLADMVWVHEE-------------DDVCVETEDGIKHCKLIAVHAGLEKDKDVKQQLEFLRARDTRVPRIEALSDRQNVWNIPKELTENPTVVVSGHHGKLHIEGLRLIIDEGGGKEERPVAAVVLPTMKIVRNTDVLA 314          
BLAST of Ca_20125 vs. TrEMBL
Match: I1L989_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2)

HSP 1 Score: 282.337 bits (721), Expect = 5.244e-74
Identity = 146/211 (69.19%), Postives = 161/211 (76.30%), Query Frame = 1
Query:    7 LQGRRWSGAIKAKFNVAKGTEYQGSIYDARPTFHSYGVPHGSADLVKAVPDEHKKFLADLVWVHEEFLFRLQTDVMFYQDDVLMNTDDGVKCCKLIAVHAGLEKGVDVKEQMKILKARDTRIPKLQPLSGRKNVWDIPE----------ELSASPTIIVSG------HHAKLHVEGYRLIIDEGGGYQDKPVAAIVLPSMTIIRDTDVLAK 591
            LQGRRWSG IK KFN  KGTEYQGSIYDA PTF SYGV H SADLVKAVPD+HKKFLADLVWVHEE             DDV +NTDDGVKCCKLIAVHAGLEKG D+KEQ+K+LKARDTR+PK++ LSGRK+VWDIPE          ++S+       G      HH KLHVEG RLIIDEGGGY+D+PVAAI+LPSM IIRDTDVLAK
Sbjct:   77 LQGRRWSGKIKVKFNTVKGTEYQGSIYDAGPTFESYGVLHASADLVKAVPDDHKKFLADLVWVHEE-------------DDVFVNTDDGVKCCKLIAVHAGLEKGKDLKEQLKLLKARDTRVPKVEALSGRKSVWDIPEKTYILRIKYFKVSSLFHFFRKGQKHLIRHHGKLHVEGLRLIIDEGGGYKDRPVAAIILPSMKIIRDTDVLAK 274          
BLAST of Ca_20125 vs. TrEMBL
Match: B9T793_RICCO (Hydrolase, putative OS=Ricinus communis GN=RCOM_0023050 PE=4 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 3.399e-73
Identity = 131/193 (67.88%), Postives = 157/193 (81.35%), Query Frame = 1
Query:    1 MHLQGRRWSGAIKAKFNVAKGTEYQGSIYDARPTFHSYGVPHGSADLVKAVPDEHKKFLADLVWVHEEFLFRLQTDVMFYQDDVLMNTDDGVKCCKLIAVHAGLEKGVDVKEQMKILKARDTRIPKLQPLSGRKNVWDIPEELSASPTIIVSGHHAKLHVEGYRLIIDEGGGYQDKPVAAIVLPSMTIIRDTD 579
            M+LQGRRW+G IK KFNVAKGTEY+GSIYDA PTF SYGVPHGSADL+K VPDEHKKFL D+VW+HEE             +DV +  ++G+K CKLIAVHAGLEKG +V+EQ+  LK +DTR+PK++ LSGRKNVWDIP+EL   PTI+VSGHH KLH+EG RLIIDEGGG ++ PVAAI+LPSM ++RDTD
Sbjct:  138 MYLQGRRWAGNIKVKFNVAKGTEYKGSIYDAGPTFESYGVPHGSADLIKVVPDEHKKFLVDMVWIHEEARL----------EDVCIENEEGMKHCKLIAVHAGLEKGKNVEEQLAFLKVKDTRVPKIEALSGRKNVWDIPKELVEKPTIVVSGHHGKLHIEGLRLIIDEGGGLENNPVAAILLPSMKLVRDTD 320          
BLAST of Ca_20125 vs. TrEMBL
Match: K4CQU6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=ACI14 PE=4 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 7.572e-73
Identity = 132/197 (67.01%), Postives = 160/197 (81.22%), Query Frame = 1
Query:    1 MHLQGRRWSGAIKAKFNVAKGTEYQGSIYDARPTFHSYGVPHGSADLVKAVPDEHKKFLADLVWVHEEFLFRLQTDVMFYQDDVLMNTDDGVKCCKLIAVHAGLEKGVDVKEQMKILKARDTRIPKLQPLSGRKNVWDIPEELSASPTIIVSGHHAKLHVEGYRLIIDEGGGYQDKPVAAIVLPSMTIIRDTDVLAK 591
            MHLQGRRW+G    KFN  KG +Y+GSIYDA PTF SYGVPHGSADL+KAVPDEHKKFLA+LVW+HEE             DDV + T++G+K CKLIAVHAGLEK   V++Q+  LKA+DTRIPK+  LSGRK+VW+IP+EL+ +PTIIVSGHHAKLH+EG RL+ID+GGG++D+PVAAIVLPS+ I+RDTD L K
Sbjct:  132 MHLQGRRWAGNHTVKFNAVKGIDYKGSIYDAAPTFQSYGVPHGSADLMKAVPDEHKKFLANLVWIHEE-------------DDVTIKTEEGIKRCKLIAVHAGLEKNKSVEQQINTLKAKDTRIPKVAALSGRKDVWEIPQELTKTPTIIVSGHHAKLHIEGLRLVIDQGGGFEDQPVAAIVLPSLEIVRDTDHLVK 315          
BLAST of Ca_20125 vs. TrEMBL
Match: M0ZSB3_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400002713 PE=4 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 6.410e-72
Identity = 131/197 (66.50%), Postives = 159/197 (80.71%), Query Frame = 1
Query:    1 MHLQGRRWSGAIKAKFNVAKGTEYQGSIYDARPTFHSYGVPHGSADLVKAVPDEHKKFLADLVWVHEEFLFRLQTDVMFYQDDVLMNTDDGVKCCKLIAVHAGLEKGVDVKEQMKILKARDTRIPKLQPLSGRKNVWDIPEELSASPTIIVSGHHAKLHVEGYRLIIDEGGGYQDKPVAAIVLPSMTIIRDTDVLAK 591
            MHLQGRRW+G    KFN  KG +Y+GSIYDA PTF SYGVPHGSADL+K V DEHKKFLA+LVW+HEE             DDV + T++G+K CKLIAVHAGLEK   V++Q+K LKA+DTRIPK+  LSGRK+VW+IP+EL+ +PTIIVSGHHAKLH+EG RL+ID+GGG++D+PVAAIVLPS+ I+RDTD L K
Sbjct:  132 MHLQGRRWAGNHTVKFNAVKGIDYKGSIYDAAPTFESYGVPHGSADLMKVVTDEHKKFLANLVWIHEE-------------DDVTIKTEEGIKRCKLIAVHAGLEKNKPVEQQIKTLKAKDTRIPKVAALSGRKDVWEIPQELTKTPTIIVSGHHAKLHIEGLRLVIDQGGGFEDQPVAAIVLPSLEIVRDTDHLVK 315          
BLAST of Ca_20125 vs. TrEMBL
Match: Q3SC78_SOLLC (ACI14 OS=Solanum lycopersicum GN=ACI14 PE=2 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 1.865e-71
Identity = 129/193 (66.84%), Postives = 157/193 (81.35%), Query Frame = 1
Query:    1 MHLQGRRWSGAIKAKFNVAKGTEYQGSIYDARPTFHSYGVPHGSADLVKAVPDEHKKFLADLVWVHEEFLFRLQTDVMFYQDDVLMNTDDGVKCCKLIAVHAGLEKGVDVKEQMKILKARDTRIPKLQPLSGRKNVWDIPEELSASPTIIVSGHHAKLHVEGYRLIIDEGGGYQDKPVAAIVLPSMTIIRDTD 579
            MHLQGRRW+G    KFN  +G +Y+GSIYDA PTF SYGVPHGSADL+KAVPDEHKKFLA+LVW+HEE             DDV + T+ G+K CKLIAVHAGLEK   V++Q+  LKA+DTRIPK+  LSGRK+VW+IP+EL+ +PTIIVSGHHAKLH+EG RL+ID+GGG++D+PVAAIVLPS+ I+RDTD
Sbjct:  132 MHLQGRRWAGNHTVKFNAVRGIDYKGSIYDAAPTFQSYGVPHGSADLMKAVPDEHKKFLANLVWIHEE-------------DDVTIKTEKGIKRCKLIAVHAGLEKNKSVEQQINTLKAKDTRIPKVAALSGRKDVWEIPQELTKTPTIIVSGHHAKLHIEGLRLVIDQGGGFEDQPVAAIVLPSLEIVRDTD 311          
BLAST of Ca_20125 vs. TrEMBL
Match: B9GPX7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_552139 PE=2 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 1.209e-70
Identity = 126/197 (63.96%), Postives = 157/197 (79.70%), Query Frame = 1
Query:    1 MHLQGRRWSGAIKAKFNVAKGTEYQGSIYDARPTFHSYGVPHGSADLVKAVPDEHKKFLADLVWVHEEFLFRLQTDVMFYQDDVLMNTDDGVKCCKLIAVHAGLEKGVDVKEQMKILKARDTRIPKLQPLSGRKNVWDIPEELSASPTIIVSGHHAKLHVEGYRLIIDEGGGYQDKPVAAIVLPSMTIIRDTDVLAK 591
            MHLQGRRW+G IK +FN +KG EY+GSIYDA PTF SYGVPHGS+DL+KAVPD+HKKFLAD VWVHEE             DDV +  ++G++ CKLIA HAGLE+G +V EQ++ LKA++T +PK++ LSGRK VWDIP+EL+  P I+VSGHH KLH++G RLIIDEGGG+++KPVAAI LPSM ++RDTD L K
Sbjct:  136 MHLQGRRWAGHIKVRFNTSKGIEYKGSIYDAGPTFTSYGVPHGSSDLLKAVPDDHKKFLADTVWVHEE-------------DDVCIEDEEGIRHCKLIAAHAGLEEGKNVGEQLRFLKAKETHVPKIEALSGRKTVWDIPKELTEKPIIVVSGHHGKLHIDGLRLIIDEGGGFENKPVAAIALPSMKLVRDTDNLTK 319          
The following BLAST results are available for this feature:
BLAST of Ca_20125 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
C6ZS09_SOYBN5.402e-8780.20Calcineurin-like phosphoesterase OS=Glycine max PE... [more]
F6HKI9_VITVI4.290e-7670.56Putative uncharacterized protein OS=Vitis vinifera... [more]
A5B2R8_VITVI1.630e-7570.05Putative uncharacterized protein OS=Vitis vinifera... [more]
M5VRT4_PRUPE4.743e-7567.86Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
I1L989_SOYBN5.244e-7469.19Uncharacterized protein OS=Glycine max PE=4 SV=2[more]
B9T793_RICCO3.399e-7367.88Hydrolase, putative OS=Ricinus communis GN=RCOM_00... [more]
K4CQU6_SOLLC7.572e-7367.01Uncharacterized protein OS=Solanum lycopersicum GN... [more]
M0ZSB3_SOLTU6.410e-7266.50Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
Q3SC78_SOLLC1.865e-7166.84ACI14 OS=Solanum lycopersicum GN=ACI14 PE=2 SV=1[more]
B9GPX7_POPTR1.209e-7063.96Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]

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BLAST of Ca_20125 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.60.21.10no descriptioncoord: 39..189
score: 2.4

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_20125_v1.0_kabuli ID=Ca_20125_v1.0_kabuli; Name=Ca_20125; organism=Cicer arietinum; type=mRNA; length=594bp
ATGCATTTGCAAGGTAGGAGATGGAGTGGTGCAATAAAGGCTAAGTTTAA
TGTTGCTAAGGGTACTGAGTATCAGGGTTCGATTTATGATGCTAGACCTA
CTTTTCACTCATATGGAGTTCCCCATGGTTCCGCTGATTTGGTTAAGGCA
GTTCCTGATGAGCATAAGAAATTTCTTGCGGATTTGGTGTGGGTCCATGA
AGAGTTCTTGTTTCGGTTGCAAACTGATGTCATGTTTTACCAGGATGATG
TCTTAATGAACACTGATGATGGAGTTAAATGCTGCAAGTTGATTGCTGTT
CATGCTGGTTTGGAGAAAGGGGTAGATGTCAAAGAGCAGATGAAAATTTT
GAAAGCTCGAGATACTCGGATACCTAAGTTGCAGCCTCTAAGTGGTAGAA
AGAATGTTTGGGATATTCCAGAGGAACTAAGTGCAAGTCCTACCATCATT
GTTAGTGGTCACCATGCAAAACTCCATGTTGAAGGCTATAGGTTGATAAT
TGATGAAGGTGGTGGATACCAAGATAAACCAGTAGCTGCAATTGTTCTTC
CTTCCATGACGATTATTCGCGATACAGATGTATTGGCAAAATAG
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protein sequence of Ca_20125_v1.0_kabuli

>Ca_20125_v1.0_kabuli ID=Ca_20125_v1.0_kabuli; Name=Ca_20125_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=197bp
MHLQGRRWSGAIKAKFNVAKGTEYQGSIYDARPTFHSYGVPHGSADLVKA
VPDEHKKFLADLVWVHEEFLFRLQTDVMFYQDDVLMNTDDGVKCCKLIAV
HAGLEKGVDVKEQMKILKARDTRIPKLQPLSGRKNVWDIPEELSASPTII
VSGHHAKLHVEGYRLIIDEGGGYQDKPVAAIVLPSMTIIRDTDVLAK
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mRNA from alignment at Ca4:22289014..22290714-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_20125_v1.0_kabuli ID=Ca_20125_v1.0_kabuli; Name=Ca_20125; organism=Cicer arietinum; type=mRNA; length=1701bp; location=Sequence derived from: Ca4:22289014..22290714- (Cicer arietinum
ATGCATTTGCAAGGTAGGAGATGGAGTGGTGCAATAAAGGCTAAGTTTAA TGTTGCTAAGGGTACTGAGTATCAGGGTTCGATTTATGATGCTAGACCTA CTTTTCACTCATATGGAGTTCCCCATGGTTCCGCTGGTAACTATGCTGTT GTTAAATTTATCTTATGACCCCAGGTGTTTGTGAGAGCTTATAAAATTTC TTAGAATATGGAATGTTGGATTAACAATTTAATGAAGTATTTATAACATA AGCTATTATTATATCTATATAGGCAAACTATTTTCATATGAGTTATCAGC TGTTTTCATAAGCTATTATGGATAACTCATGGAAATAAGTTGTAAATTGC TTATGAACATGTCATAAGTTGTTTTAATCAGTTCTCCAAAAGAGTCAGGT GTTTATGCTAGTAGATGAGTTCAAATAAATAAAAGCAAATGGACCATATG TCAATAAACTATTGTTAGCTTACATTTTATGATAACTTATGAAAACAACT TACAACTTAAATGAAAATGGTTTACTTTATTGTTGTCAATCGTGGATTGT TCAAATTCTGATACATTATAGTGTTATAGTGCTACTATAGCCATCGTTTG ACAACACTTCGTACGAAATAGCGTTTTGCAGAACAATAGTGATTTGATCA AATTCCGTACTATAGCACCGCTATTTGACAACACTAGTTTAATCGTATTA TATAATTTGATTATAGAAACAACTTATATAAGTGTTTAACTAAGCCGTCC ACTCAAACACAATGTATAGGGATTTTTGCTGCTATGAATAAATGGCACTC TCTTGAGTTTTGAAGTTCAACAAAAATTGGTTTTTGTTAGTTCCCGTACT TAGAGGAGCAATTCATTGCATGCAGATTTGGTTAAGGCAGTTCCTGATGA GCATAAGAAATTTCTTGCGGATTTGGTGTGGGTCCATGAAGAGGTGGTTC TTACTTTCATTACCTCTTTGTTTCTTTAGTCATATCAGATGTCACGAATT TCCAAGTTATACATGGTTGCTGCTTGGAATAACAGTTCTTGTTTCGGTTG CAAACTGATGTCATGTTTTACCAGGATGATGTCTTAATGAACACTGATGA TGGAGTTAAATGCTGCAAGTTGATTGCTGTTCATGCTGGTTTGGAGAAAG GGGTAGATGTCAAAGAGCAGATGAAAATTTTGAAAGCTCGAGATACTCGG ATACCTAAGTTGCAGCCTCTAAGTGGTAGAAAGAATGTTTGGGATATTCC AGAGGTGACAGCTTGCTTCTTATTTTCATATTACTCAACATGTTTGCATA TATGAAGCATTGATATGGACACTAGATAAAACGTTGACATGAGACGCCAA TAATAATTGAGAAAATAAAAGTGATTGATTGTAAGTTGTAACCAAATGTG TTGGTGTCTTCATTCCTTTGTTTTGAGGTGTTGGTGCTACATAGCTTTGT ATGCCATGCACATTGTTAAATTTTTTCGCAGTTGCTTTTGTAGCTTCTTC ATATATATTGGCTCACTGTTTTTCTTATAGGAACTAAGTGCAAGTCCTAC CATCATTGTTAGTGGTCACCATGCAAAACTCCATGTTGAAGGCTATAGGT TGATAATTGATGAAGGTGGTGGATACCAAGATAAACCAGTAGCTGCAATT GTTCTTCCTTCCATGACGATTATTCGCGATACAGATGTATTGGCAAAATA G
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Coding sequence (CDS) from alignment at Ca4:22289014..22290714-

>Ca_20125_v1.0_kabuli ID=Ca_20125_v1.0_kabuli; Name=Ca_20125; organism=Cicer arietinum; type=CDS; length=594bp; location=Sequence derived from: Ca4:22289014..22290714- (Cicer arietinum
ATGCATTTGCAAGGTAGGAGATGGAGTGGTGCAATAAAGGCTAAGTTTAA
TGTTGCTAAGGGTACTGAGTATCAGGGTTCGATTTATGATGCTAGACCTA
CTTTTCACTCATATGGAGTTCCCCATGGTTCCGCTGATTTGGTTAAGGCA
GTTCCTGATGAGCATAAGAAATTTCTTGCGGATTTGGTGTGGGTCCATGA
AGAGTTCTTGTTTCGGTTGCAAACTGATGTCATGTTTTACCAGGATGATG
TCTTAATGAACACTGATGATGGAGTTAAATGCTGCAAGTTGATTGCTGTT
CATGCTGGTTTGGAGAAAGGGGTAGATGTCAAAGAGCAGATGAAAATTTT
GAAAGCTCGAGATACTCGGATACCTAAGTTGCAGCCTCTAAGTGGTAGAA
AGAATGTTTGGGATATTCCAGAGGAACTAAGTGCAAGTCCTACCATCATT
GTTAGTGGTCACCATGCAAAACTCCATGTTGAAGGCTATAGGTTGATAAT
TGATGAAGGTGGTGGATACCAAGATAAACCAGTAGCTGCAATTGTTCTTC
CTTCCATGACGATTATTCGCGATACAGATGTATTGGCAAAATAG
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