Ca_20144, Ca_20144_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_20144
Unique NameCa_20144_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length384
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca4chromosomeCa4:21947443..21947826 +Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR261Pisum sativum Cameor genome v1aPisum sativum
capsR288Pisum sativum Cameor genome v1aPisum sativum
capsR347Pisum sativum Cameor genome v1aPisum sativum
cavuR252Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR303Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR302Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR389Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0453Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0519Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0282Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0695Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0704Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0903Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1131Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1204Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL387Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL408Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR256Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR283Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR295Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR294Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR342Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR292Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR344Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR287Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR367Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR362Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR397Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR237Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR285Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR120Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR131Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL074Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL362Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL375Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL468Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR272Cicer arietinum
cacarR292Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Vigun07g065800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-KK1_006434Cajanus cajan Asha genome v1.0Cajanus cajan
Phvul.007G224200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Hedin2.R1.3g045640.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Psat6g076280.1Pisum sativum Cameor genome v1aPisum sativum
LR48_mrnaVigan02g077400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-XM_014656075.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Tiffany.R1.3g036920.1Vicia faba cv. Tiffany genome v1.0Vicia faba

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004497538.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_20144-CDS1Ca_20144-CDS1Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_20144_v1.0_kabuliCa_20144_v1.0_kabuliCicer arietinumpolypeptide


Homology
BLAST of Ca_20144 vs. SwissProt
Match: AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 2.328e-10
Identity = 34/66 (51.52%), Postives = 43/66 (65.15%), Query Frame = 1
Query:   58 DVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGF-NKSGPLAIPCDEFLFEDILHFL 252
            DV +G+LAV VGE  RRFVI   YLN P  Q LL +A E +G+ + +G L IPC E +F+ I  FL
Sbjct:   24 DVEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFL 89          
BLAST of Ca_20144 vs. SwissProt
Match: ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 1.971e-9
Identity = 31/62 (50.00%), Postives = 41/62 (66.13%), Query Frame = 1
Query:   58 DVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGF-NKSGPLAIPCDEFLFEDI 240
            D P+G+LAV VGE  +RFVI   +LN P+ Q LL +A E +G+ +  G L IPC E LF+ I
Sbjct:   24 DAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHI 85          
BLAST of Ca_20144 vs. SwissProt
Match: AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 3.362e-9
Identity = 31/63 (49.21%), Postives = 41/63 (65.08%), Query Frame = 1
Query:   55 SDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGF-NKSGPLAIPCDEFLFEDI 240
            +D P+G+LAV VGE  +RFVI   YLN P  Q LL +A E +G+ +  G L IPC E +F+ I
Sbjct:   15 ADAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQCI 77          
BLAST of Ca_20144 vs. SwissProt
Match: AXX15_SOYBN (Auxin-induced protein X15 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 5.735e-9
Identity = 30/62 (48.39%), Postives = 40/62 (64.52%), Query Frame = 1
Query:   58 DVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGF-NKSGPLAIPCDEFLFEDI 240
            D P+G+LAV VGE  +RFVI   Y+N P  Q LL +A E +G+ +  G L IPC E +F+ I
Sbjct:   16 DAPKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQRI 77          
BLAST of Ca_20144 vs. SwissProt
Match: AX10A_SOYBN (Auxin-induced protein X10A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 2.179e-8
Identity = 34/75 (45.33%), Postives = 46/75 (61.33%), Query Frame = 1
Query:   16 RKNACSGNGKKLPS-DVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGF-NKSGPLAIPC--DEFL 228
            RK + + N     S +VP+G+L V VG+  RRF+I   YLN P  Q LL++A E +G+ +  G L IPC  DEFL
Sbjct:    9 RKTSIAANQASSKSVEVPKGYLVVYVGDKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPCKEDEFL 83          
BLAST of Ca_20144 vs. SwissProt
Match: A10A5_SOYBN (Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 4.855e-8
Identity = 29/62 (46.77%), Postives = 39/62 (62.90%), Query Frame = 1
Query:   58 DVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGF-NKSGPLAIPCDEFLFEDI 240
            DVP+G+ AV VG+  RRF I   YLN P  Q+LL +A E +G+ +  G L IPC E  F ++
Sbjct:   25 DVPKGYAAVYVGDKMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEEEFLNV 86          
BLAST of Ca_20144 vs. TrEMBL
Match: Q1SN26_MEDTR (Auxin responsive SAUR protein OS=Medicago truncatula GN=MTR_1g061570 PE=4 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 6.345e-53
Identity = 105/127 (82.68%), Postives = 112/127 (88.19%), Query Frame = 1
Query:    1 MTWMWRKNACSGNGKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLGGGTHTQRPSSHILMKKLELSFSKDAAPLLEAFDSKRSNKYKH 381
            M  MWRKNACSG  KKLPSDVPRGHLAVTVGE NRRFVIRADYLNHPVLQ+LLD+AYEGYGFNKSGPL+IPCDEFLFEDIL  LGGGT  +R SS +L KKL+LSF KDA PLLEAFDSKRSN YK+
Sbjct:    1 MACMWRKNACSG--KKLPSDVPRGHLAVTVGETNRRFVIRADYLNHPVLQELLDQAYEGYGFNKSGPLSIPCDEFLFEDILLSLGGGTVARRSSSPVLTKKLDLSFLKDAVPLLEAFDSKRSNNYKN 125          
BLAST of Ca_20144 vs. TrEMBL
Match: I1LZE5_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 6.581e-42
Identity = 86/121 (71.07%), Postives = 97/121 (80.17%), Query Frame = 1
Query:    1 MTWMWRKNACSGNGKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLGGGTHTQRPSSHILMKKLELSFSKDAAPLLEAFDSKR 363
            M  MW KNA  G+GKK P+DVPRGHLAV VGEA RRFVIRADYLNHP+LQQLLD+ YEGYGFNKSGPLAIPCDEFLFEDI+  L  GT     SSH+ +KKL+  FSKD+ PLL+  +SKR
Sbjct:    1 MACMWLKNARGGSGKKPPTDVPRGHLAVIVGEAKRRFVIRADYLNHPLLQQLLDQLYEGYGFNKSGPLAIPCDEFLFEDIIQTLRDGT----SSSHVPLKKLDFGFSKDSMPLLQGLESKR 117          
BLAST of Ca_20144 vs. TrEMBL
Match: M5WG29_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017275mg PE=4 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 3.628e-24
Identity = 56/81 (69.14%), Postives = 63/81 (77.78%), Query Frame = 1
Query:   34 GNGKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLGGGTHTQR 276
            G+ KK P DVP GHLAV VGEA RRFV+RAD LNHPVL+QLLD+AYE Y     GPLAIPCDE LFEDI+H L GGT + +
Sbjct:   34 GSEKKPPRDVPPGHLAVVVGEARRRFVVRADLLNHPVLRQLLDQAYEEYAHECPGPLAIPCDELLFEDIVHSLRGGTSSNQ 114          
BLAST of Ca_20144 vs. TrEMBL
Match: K4B3R9_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc01g110560.2 PE=4 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.201e-21
Identity = 48/84 (57.14%), Postives = 63/84 (75.00%), Query Frame = 1
Query:    1 MTWMWRKNACSGNGKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFL 252
            M   W+K A S + K++ SDVP GH+A++VG   RRFV+RA YLNHP+ ++LL +A E YGF+  G LAIPCDEFLFE+IL F+
Sbjct:   20 MLRQWKKRAISSSSKRIASDVPAGHVAISVGSNCRRFVVRAKYLNHPIFRKLLTQAEEEYGFSNHGTLAIPCDEFLFEEILRFV 103          
BLAST of Ca_20144 vs. TrEMBL
Match: M0ZN03_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001655 PE=4 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.874e-21
Identity = 47/84 (55.95%), Postives = 63/84 (75.00%), Query Frame = 1
Query:    1 MTWMWRKNACSGNGKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFL 252
            M   W+K A S + K++ SD+P GH+A++VG   RRFV+RA YLNHP+ ++LL +A E YGF+  G LAIPCDEFLFE+IL F+
Sbjct:   20 MLRQWKKRAISSSSKRIASDIPAGHVAISVGSNCRRFVVRAKYLNHPIFRKLLTQAEEEYGFSNHGTLAIPCDEFLFEEILRFV 103          
BLAST of Ca_20144 vs. TrEMBL
Match: M5XHA8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012903mg PE=4 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.427e-20
Identity = 59/126 (46.83%), Postives = 75/126 (59.52%), Query Frame = 1
Query:   13 WRKNACSGNGKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFL-----GGGTHTQRPSS-----HILMKKLELSFSKDAAPLLEAFDSK 360
            WR  A   +  ++PSDVP GH+AV+VG +  RFV+RA YLNHPV ++LL EA E YGF+  GPLAIPCDE LFE++L F+     GG T            H  ++   L F  D+ PLL  F  K
Sbjct:   24 WRSKARM-SANRIPSDVPAGHVAVSVGSSCTRFVVRASYLNHPVFKKLLVEAEEEYGFSNQGPLAIPCDESLFEEVLRFISRSESGGSTRFVNLDDFQRYCHAGIRS-NLDFWADSRPLLRGFSDK 147          
BLAST of Ca_20144 vs. TrEMBL
Match: M1CVJ6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400029423 PE=4 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.427e-20
Identity = 47/85 (55.29%), Postives = 64/85 (75.29%), Query Frame = 1
Query:    1 MTWMWRKNACSGNGKK-LPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFL 252
            M   WRK A + + ++ +PSDVP GH+AVTVG   +RF++RA YLNHP+ ++LL +  E YGF  SGPLAIPCDE+LFE++L +L
Sbjct:   16 MLQRWRKKAATTSSRRHVPSDVPTGHVAVTVGPNCKRFIVRATYLNHPMFKKLLSQTEEEYGFTNSGPLAIPCDEYLFEELLRYL 100          
BLAST of Ca_20144 vs. TrEMBL
Match: F6I177_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g00930 PE=4 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.577e-19
Identity = 51/117 (43.59%), Postives = 70/117 (59.83%), Query Frame = 1
Query:   13 WRKNACSGNGK-KLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLGGGTHTQRPSSHILMKKLELSFSKDAAPLLEAFDSK 360
            WR+ A S  G+ ++PSDVP GH+A+ VG   RRF++RA YLNHPV + L  EA E YGF   GPLAIPCDE +FE++L  +   + +  P    +    +     ++ PLL  F  K
Sbjct:   23 WRRKAASSGGRIRVPSDVPAGHVAICVGSGCRRFIVRASYLNHPVFKALFLEAEEEYGFANHGPLAIPCDESVFEEVLRVV-SRSESSHPPRLTIGDDFQRRCHVESRPLLHGFAEK 138          
BLAST of Ca_20144 vs. TrEMBL
Match: B9RG63_RICCO (Indole-3-acetic acid-induced protein ARG7, putative OS=Ricinus communis GN=RCOM_1451440 PE=4 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.577e-19
Identity = 52/121 (42.98%), Postives = 73/121 (60.33%), Query Frame = 1
Query:   13 WRKNA---CSGNGKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLGGGTHTQRPSS--------HILMKKLELSFSKDAAPLL 342
            WR+ A    S  G   P+DVP GH+AV VGE+ +RF++RA YLNHP+ + LL +A E YGF   GPL IPCDE +FE+IL  +   + + R S+        H+ + +  L F  ++ PLL
Sbjct:   20 WRRKARLTASSRGAAAPADVPAGHVAVCVGESYKRFIVRATYLNHPIFKNLLVQAEEEYGFKNIGPLTIPCDESVFEEILRVVSSRSESLRFSNVEEVQRCCHVDIIRSHLEFLSESRPLL 140          
BLAST of Ca_20144 vs. TrEMBL
Match: A5BVS8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031686 PE=4 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.577e-19
Identity = 51/117 (43.59%), Postives = 70/117 (59.83%), Query Frame = 1
Query:   13 WRKNACSGNGK-KLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLGGGTHTQRPSSHILMKKLELSFSKDAAPLLEAFDSK 360
            WR+ A S  G+ ++PSDVP GH+A+ VG   RRF++RA YLNHPV + L  EA E YGF   GPLAIPCDE +FE++L  +   + +  P    +    +     ++ PLL  F  K
Sbjct:   25 WRRKAASSGGRIRVPSDVPAGHVAICVGSGCRRFIVRASYLNHPVFKALFLEAEEEYGFANHGPLAIPCDESVFEEVLRVV-SRSESSHPPRLTIGDDFQRRCHVESRPLLHGFAEK 140          
BLAST of Ca_20144 vs. DB:Swiss
Match: SAU40_ARATH (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.457e-16
Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 1
Query:   49 LPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLGGG 261
            + S VP GH+ V VGE   RFV+ A+ LNHPV   LL+ + + YG+ + G L IPC+ F+FE ++  L  G
Sbjct:   44 VASSVPSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFEQVVESLRSG 114          
BLAST of Ca_20144 vs. DB:Swiss
Match: SAU72_ARATH (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.776e-15
Identity = 33/81 (40.74%), Postives = 48/81 (59.26%), Query Frame = 1
Query:   19 KNACSGNGKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLGGG 261
            +++ +   KK  S VP GH+ V VG+   RFV+ A+ LNHPV   LL+ + + YG+ + G L IPC   +FE I+  L  G
Sbjct:   36 RSSVTRRSKKQTSSVPEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCHVLVFERIMESLRLG 116          
BLAST of Ca_20144 vs. DB:Swiss
Match: SAU50_ARATH (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.827e-15
Identity = 34/80 (42.50%), Postives = 44/80 (55.00%), Query Frame = 1
Query:   28 CSGNGKK---------LPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDI 240
            CS  GKK         LP DVP+GH  V VGE   R+++   +L HP  Q LL  A E +GF+    L IPCDE +F+ +
Sbjct:   23 CSSLGKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTL 102          
BLAST of Ca_20144 vs. DB:Swiss
Match: AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 2.690e-14
Identity = 38/81 (46.91%), Postives = 48/81 (59.26%), Query Frame = 1
Query:   16 RKNACSGN-GKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNK-SGPLAIPCDEFLFEDILHFL 252
            RK + S N       DV +G+LAV VGE  RRFVI   YLN P  Q LL +A E +G++  +G L IPC E +F+ I  FL
Sbjct:    9 RKASFSANQASSKAVDVEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFL 89          
BLAST of Ca_20144 vs. DB:Swiss
Match: SAU71_ARATH (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.429e-14
Identity = 36/86 (41.86%), Postives = 47/86 (54.65%), Query Frame = 1
Query:   10 MWRKNACSGNGKKLP--SDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLGGG 261
            + R  +  G  KK    S VP GH+ V VG    RFV+ A+ LNHPV   LL ++ + YG+ + G L IPC   +FE IL  L  G
Sbjct:   19 LLRSESQRGRTKKEKHKSWVPEGHVPVYVGHEMERFVVNAELLNHPVFVALLKQSAQEYGYEQQGVLRIPCHVLVFERILESLRLG 104          
BLAST of Ca_20144 vs. DB:Swiss
Match: SAU50_HELAN (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 3.705e-13
Identity = 31/73 (42.47%), Postives = 40/73 (54.79%), Query Frame = 1
Query:   28 CSGNGKK-----LPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLF 231
            CS  GK      LP+DVP+GH  V VGE   R+++    L+HP  Q LL  + E +GFN    + IPC E  F
Sbjct:   23 CSSFGKNNDDSGLPNDVPKGHFVVYVGERRNRYIVPISCLDHPTFQDLLQRSEEEFGFNHDMGIIIPCQEVDF 95          
BLAST of Ca_20144 vs. DB:Swiss
Match: AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 7.150e-13
Identity = 32/67 (47.76%), Postives = 42/67 (62.69%), Query Frame = 1
Query:   55 SDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKS-GPLAIPCDEFLFEDILHFL 252
            +D P+G+LAV VGE  +RFVI   YLN P  Q LL +A E +G++   G L IPC E +F+ I   L
Sbjct:   15 ADAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQCITSCL 81          
BLAST of Ca_20144 vs. DB:Swiss
Match: ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 8.227e-13
Identity = 32/68 (47.06%), Postives = 42/68 (61.76%), Query Frame = 1
Query:   58 DVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKS-GPLAIPCDEFLFEDILHFLGG 258
            D P+G+LAV VGE  +RFVI   +LN P+ Q LL +A E +G++   G L IPC E LF+ I   L  
Sbjct:   24 DAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCLSA 91          
BLAST of Ca_20144 vs. DB:Swiss
Match: AXX15_SOYBN (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 1.443e-12
Identity = 30/62 (48.39%), Postives = 40/62 (64.52%), Query Frame = 1
Query:   58 DVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKS-GPLAIPCDEFLFEDI 240
            D P+G+LAV VGE  +RFVI   Y+N P  Q LL +A E +G++   G L IPC E +F+ I
Sbjct:   16 DAPKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQRI 77          
BLAST of Ca_20144 vs. DB:Swiss
Match: SAU10_ARATH (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 4.583e-12
Identity = 31/79 (39.24%), Postives = 42/79 (53.16%), Query Frame = 1
Query:   10 MWRKNACSGNGKK-LPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDEAYEGYGFNKSGPLAIPCDEFLFEDIL 243
            M   N C  N +  LP DVP+GH  V VG    R+++   +L+H   Q LL  A E +GF+    L IPCDE  F  ++
Sbjct:   30 MKNVNGCYYNQEDDLPQDVPKGHFPVYVGPNRSRYIVPISWLHHSEFQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSLI 108          
The following BLAST results are available for this feature:
BLAST of Ca_20144 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 6
Match NameE-valueIdentityDescription
AX6B_SOYBN2.328e-1051.52Auxin-induced protein 6B OS=Glycine max PE=2 SV=1[more]
ARG7_VIGRR1.971e-950.00Indole-3-acetic acid-induced protein ARG7 OS=Vigna... [more]
AX15A_SOYBN3.362e-949.21Auxin-induced protein 15A OS=Glycine max PE=2 SV=1[more]
AXX15_SOYBN5.735e-948.39Auxin-induced protein X15 OS=Glycine max PE=2 SV=1[more]
AX10A_SOYBN2.179e-845.33Auxin-induced protein X10A OS=Glycine max PE=2 SV=... [more]
A10A5_SOYBN4.855e-846.77Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=... [more]
back to top
BLAST of Ca_20144 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
Q1SN26_MEDTR6.345e-5382.68Auxin responsive SAUR protein OS=Medicago truncatu... [more]
I1LZE5_SOYBN6.581e-4271.07Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
M5WG29_PRUPE3.628e-2469.14Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
K4B3R9_SOLLC2.201e-2157.14Uncharacterized protein OS=Solanum lycopersicum GN... [more]
M0ZN03_SOLTU2.874e-2155.95Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
M5XHA8_PRUPE1.427e-2046.83Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
M1CVJ6_SOLTU1.427e-2055.29Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
F6I177_VITVI1.577e-1943.59Putative uncharacterized protein OS=Vitis vinifera... [more]
B9RG63_RICCO1.577e-1942.98Indole-3-acetic acid-induced protein ARG7, putativ... [more]
A5BVS8_VITVI1.577e-1943.59Putative uncharacterized protein OS=Vitis vinifera... [more]

Pages

back to top
BLAST of Ca_20144 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
SAU40_ARATH3.457e-1645.07Auxin-responsive protein SAUR40 OS=Arabidopsis tha... [more]
SAU72_ARATH2.776e-1540.74Auxin-responsive protein SAUR72 OS=Arabidopsis tha... [more]
SAU50_ARATH2.827e-1542.50Auxin-responsive protein SAUR50 OS=Arabidopsis tha... [more]
AX6B_SOYBN2.690e-1446.91Auxin-induced protein 6B OS=Glycine max OX=3847 PE... [more]
SAU71_ARATH5.429e-1441.86Auxin-responsive protein SAUR71 OS=Arabidopsis tha... [more]
SAU50_HELAN3.705e-1342.47Auxin-responsive protein SAUR50 OS=Helianthus annu... [more]
AX15A_SOYBN7.150e-1347.76Auxin-induced protein 15A OS=Glycine max OX=3847 P... [more]
ARG7_VIGRR8.227e-1347.06Indole-3-acetic acid-induced protein ARG7 OS=Vigna... [more]
AXX15_SOYBN1.443e-1248.39Auxin-induced protein X15 OS=Glycine max OX=3847 P... [more]
SAU10_ARATH4.583e-1239.24Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabido... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003676Auxin responsive SAUR proteinPFAMPF02519Auxin_induciblecoord: 15..84
score: 1.1
NoneNo IPR availableSEGsegsegcoord: 20..34
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_20144_v1.0_kabuli ID=Ca_20144_v1.0_kabuli; Name=Ca_20144; organism=Cicer arietinum; type=mRNA; length=384bp
ATGACATGGATGTGGCGTAAGAATGCCTGCAGCGGCAACGGGAAGAAACT
TCCGTCAGACGTGCCGCGAGGTCACTTGGCCGTGACAGTAGGAGAGGCAA
ACAGGAGGTTTGTGATAAGAGCTGACTACCTGAACCATCCAGTGCTTCAA
CAACTGCTGGATGAGGCGTATGAAGGATACGGCTTCAACAAGAGTGGTCC
TCTGGCTATACCTTGTGATGAGTTCTTATTTGAAGATATTCTTCATTTCC
TTGGAGGAGGAACACACACACAGCGACCCTCTTCCCACATACTTATGAAA
AAGCTAGAGTTGAGCTTTTCCAAAGACGCGGCACCGCTGCTTGAAGCCTT
TGACAGCAAAAGGAGCAACAAATACAAGCATTAA
back to top

protein sequence of Ca_20144_v1.0_kabuli

>Ca_20144_v1.0_kabuli ID=Ca_20144_v1.0_kabuli; Name=Ca_20144_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=127bp
MTWMWRKNACSGNGKKLPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQ
QLLDEAYEGYGFNKSGPLAIPCDEFLFEDILHFLGGGTHTQRPSSHILMK
KLELSFSKDAAPLLEAFDSKRSNKYKH
back to top

mRNA from alignment at Ca4:21947443..21947826+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_20144_v1.0_kabuli ID=Ca_20144_v1.0_kabuli; Name=Ca_20144; organism=Cicer arietinum; type=mRNA; length=384bp; location=Sequence derived from: Ca4:21947443..21947826+ (Cicer arietinum
ATGACATGGATGTGGCGTAAGAATGCCTGCAGCGGCAACGGGAAGAAACT TCCGTCAGACGTGCCGCGAGGTCACTTGGCCGTGACAGTAGGAGAGGCAA ACAGGAGGTTTGTGATAAGAGCTGACTACCTGAACCATCCAGTGCTTCAA CAACTGCTGGATGAGGCGTATGAAGGATACGGCTTCAACAAGAGTGGTCC TCTGGCTATACCTTGTGATGAGTTCTTATTTGAAGATATTCTTCATTTCC TTGGAGGAGGAACACACACACAGCGACCCTCTTCCCACATACTTATGAAA AAGCTAGAGTTGAGCTTTTCCAAAGACGCGGCACCGCTGCTTGAAGCCTT TGACAGCAAAAGGAGCAACAAATACAAGCATTAA
back to top

Coding sequence (CDS) from alignment at Ca4:21947443..21947826+

>Ca_20144_v1.0_kabuli ID=Ca_20144_v1.0_kabuli; Name=Ca_20144; organism=Cicer arietinum; type=CDS; length=384bp; location=Sequence derived from: Ca4:21947443..21947826+ (Cicer arietinum
ATGACATGGATGTGGCGTAAGAATGCCTGCAGCGGCAACGGGAAGAAACT
TCCGTCAGACGTGCCGCGAGGTCACTTGGCCGTGACAGTAGGAGAGGCAA
ACAGGAGGTTTGTGATAAGAGCTGACTACCTGAACCATCCAGTGCTTCAA
CAACTGCTGGATGAGGCGTATGAAGGATACGGCTTCAACAAGAGTGGTCC
TCTGGCTATACCTTGTGATGAGTTCTTATTTGAAGATATTCTTCATTTCC
TTGGAGGAGGAACACACACACAGCGACCCTCTTCCCACATACTTATGAAA
AAGCTAGAGTTGAGCTTTTCCAAAGACGCGGCACCGCTGCTTGAAGCCTT
TGACAGCAAAAGGAGCAACAAATACAAGCATTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR003676SAUR_fam