Homology
BLAST of Ca_01606 vs. TrEMBL
Match:
I3NMS1_HEVBR (Uncharacterized protein OS=Hevea brasiliensis PE=4 SV=1)
HSP 1 Score: 84.7297 bits (208), Expect = 1.169e-14
Identity = 50/90 (55.56%), Postives = 56/90 (62.22%), Query Frame = 1
Query: 4 AATTTTCSGFFN---------LRXXXXXXXNGCGGKLNWVAMSFINGVTMAFFASLNRCSCIRIATXXXXXXXXXANPLMFNDGNLRHDG 246
AAT+T+C+GFFN +R GCG KL+ VAM FINGV AFFASL RCSCIRIAT A PL+ NDGNLRHDG
Sbjct: 3 AATSTSCAGFFNFRSNSDEGRVRPSSTHGSPGCG-KLDGVAMWFINGVASAFFASLERCSCIRIATEDDGDEANDA-PLIMNDGNLRHDG 90
BLAST of Ca_01606 vs. TrEMBL
Match:
C6TFZ6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)
HSP 1 Score: 83.9593 bits (206), Expect = 1.994e-14
Identity = 51/92 (55.43%), Postives = 56/92 (60.87%), Query Frame = 1
Query: 1 MAATTTTCSGFFN-LRXXXXXXXNGCGGKLNWVAMSFINGVTMAFFASLNRCSCIRIATXXXXXXXXXANPLMFNDGNLRHDGVDSVTATTS 273
MAATTT+ S + R + GK + VAM FINGVT AFFASLNRCSCIRIAT PLM NDGNLRHDGV +V T S
Sbjct: 1 MAATTTSSSSSSDESRVSSTQASSSACGKFDGVAMWFINGVTTAFFASLNRCSCIRIATEEDGDDANDL-PLMLNDGNLRHDGVVAVVGTAS 91
BLAST of Ca_01606 vs. TrEMBL
Match:
E0CNZ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g08750 PE=4 SV=1)
HSP 1 Score: 82.0333 bits (201), Expect = 7.578e-14
Identity = 52/92 (56.52%), Postives = 55/92 (59.78%), Query Frame = 1
Query: 1 MAATT-TTCSGFFNLRXXXXXXXN---------GCGGKLNWVAMSFINGVTMAFFASLNRCSCIRIATXXXXXXXXXANPLMFNDGNLRHDG 246
MAATT TTC+ FNLR GCG KL+ VAM FINGV AFFASL RCSCIRIAT PL+FNDGNLRHDG
Sbjct: 1 MAATTSTTCTSLFNLRPASDEPRARTSSTHASPGCG-KLDGVAMWFINGVAAAFFASLERCSCIRIATEDDCDDANDL-PLIFNDGNLRHDG 90
BLAST of Ca_01606 vs. TrEMBL
Match:
I1JTS7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)
HSP 1 Score: 81.2629 bits (199), Expect = 1.293e-13
Identity = 54/105 (51.43%), Postives = 59/105 (56.19%), Query Frame = 1
Query: 1 MAATTTT----CSG--FFNLRXXXXXXX--------NGCGGKLNWVAMSFINGVTMAFFASLNRCSCIRIATXXXXXXXXXANPLMFNDGNLRHDGVDSVTATTS 273
MAATTT+ C G F +LR + GK + VAM FINGVT AFFASLNRCSCIRIAT PLM NDGNLRHDGV +V T S
Sbjct: 1 MAATTTSSSSSCGGGSFLSLRSPNSDESRVSSTQASSSACGKFDGVAMWFINGVTTAFFASLNRCSCIRIATEEDGDDANDL-PLMLNDGNLRHDGVVAVVGTAS 104
BLAST of Ca_01606 vs. TrEMBL
Match:
I1K888_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)
HSP 1 Score: 77.7962 bits (190), Expect = 1.429e-12
Identity = 53/102 (51.96%), Postives = 58/102 (56.86%), Query Frame = 1
Query: 1 MAATTTTCS--GFFNLRXXXXXXXNGCG---------GKLNWVAMSFINGVTMAFFASLNRCSCIRIATXXXXXXXXXANPLMFNDGNLRHDGVDSVTATTS 273
MA TT++ S GFF+LR + GK + VAM FINGVT AFFASLNRCSCIRIAT PLM NDGNLR DGV V TTS
Sbjct: 1 MAVTTSSSSTSGFFSLRSPNSVDSSRVSSTHGSSSACGKFDGVAMWFINGVTTAFFASLNRCSCIRIATEEDGDDANDL-PLMLNDGNLRQDGV-VVACTTS 100
BLAST of Ca_01606 vs. TrEMBL
Match:
A9PCJ9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_823861 PE=4 SV=1)
HSP 1 Score: 75.8702 bits (185), Expect = 5.431e-12
Identity = 49/91 (53.85%), Postives = 54/91 (59.34%), Query Frame = 1
Query: 1 MAATTTT-CSGFFNLRXXXXXXX----------NGCGGKLNWVAMSFINGVTMAFFASLNRCSCIRIATXXXXXXXXXANPLMFNDGNLRH 240
MAATT+T CS FF+LR GCG KL+ VAM FINGV AFFASL RCSCIRIAT A PL+ NDGN+RH
Sbjct: 1 MAATTSTNCSSFFSLRSNSVEPRVRTTSSHGSSPGCG-KLDGVAMWFINGVASAFFASLERCSCIRIATEDDGDEANDA-PLILNDGNMRH 89
BLAST of Ca_01606 vs. TrEMBL
Match:
I1MXG2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)
HSP 1 Score: 73.9442 bits (180), Expect = 2.064e-11
Identity = 47/88 (53.41%), Postives = 55/88 (62.50%), Query Frame = 1
Query: 7 ATTTTCS-GFFNLRXXXXXXXN--GCGGKLNWVAMSFINGVTMAFFASLNRCSCIRIATXXXXXXXXXANPLMFNDGNLRHDGVDSVT 261
+T+++CS GFF+LR GCG K + VAM FINGVT AFFASL RC CIRIAT PL+ NDGNLRH VD+ T
Sbjct: 5 STSSSCSNGFFSLRSTNSGESRVRGCG-KPDGVAMWFINGVTTAFFASLERC-CIRIATEEDVEDGNDDVPLILNDGNLRHRTVDTTT 90
BLAST of Ca_01606 vs. TrEMBL
Match:
K4BUJ4_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc04g077570.1 PE=4 SV=1)
HSP 1 Score: 71.2478 bits (173), Expect = 1.338e-10
Identity = 44/87 (50.57%), Postives = 50/87 (57.47%), Query Frame = 1
Query: 1 MAATTTT-CSGFFN---------LRXXXXXXXNGCGGKLNWVAMSFINGVTMAFFASLNRCSCIRIATXXXXXXXXXANPLMFNDGN 231
MAATTTT C+ FFN +R GCG K + +AM INGV+ AFFASL RCSCIRIAT PLM+NDGN
Sbjct: 1 MAATTTTSCASFFNSRPSSVEPRIRSSAASTTPGCG-KFDGMAMWLINGVSAAFFASLQRCSCIRIATHEDEGEDANDLPLMYNDGN 86
BLAST of Ca_01606 vs. TrEMBL
Match:
M5XFL8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013663mg PE=4 SV=1)
HSP 1 Score: 70.4774 bits (171), Expect = 2.282e-10
Identity = 48/101 (47.52%), Postives = 55/101 (54.46%), Query Frame = 1
Query: 7 ATTTTCSGFFNLRXXXXXXX------------NGCGGKLNWVAMSFINGVTMAFFASLNRCSCIRIATXXXXXXXXXANPLMFNDGNLRHDGVDSVTATTS 273
ATTT+ S FFNLR +GCG K++ VAM IN VT FFASL RCSCIRIAT PL+FNDGNLR++ ATTS
Sbjct: 2 ATTTSSSNFFNLRSTTTSVHPKSRPLSSNGSSHGCG-KVDGVAMWLINSVTTCFFASLERCSCIRIATQDDGDDCNDL-PLIFNDGNLRYE----AEATTS 96
BLAST of Ca_01606 vs. TrEMBL
Match:
M1A1F5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400004914 PE=4 SV=1)
HSP 1 Score: 70.4774 bits (171), Expect = 2.282e-10
Identity = 46/101 (45.54%), Postives = 56/101 (55.45%), Query Frame = 1
Query: 1 MAATTTT-CSGFFN---------LRXXXXXXXNGCGGKLNWVAMSFINGVTMAFFASLNRCSCIRIATXXXXXXXXXANPLMFNDGNLRHDGVDSVTATTS 273
MAATTTT C FF+ +R +GCG K + +AM INGV+ AFFASL RCSCIRIAT PLM+NDGN G+ S ++ S
Sbjct: 1 MAATTTTSCGSFFSFRPSSVEPRIRSSAASTTSGCG-KFDGMAMWLINGVSAAFFASLQRCSCIRIATHEDEGEDANDLPLMYNDGNY---GISSSNSSCS 97
The following BLAST results are available for this feature:
BLAST of Ca_01606 vs. TrEMBL
Analysis Date: 2013-10-24 (
Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL )
Total hits: 12
50 100 150 200 250 300 Expect = 1.17e-14 / Id = 55.56 Expect = 1.99e-14 / Id = 55.43 Expect = 7.58e-14 / Id = 56.52 Expect = 1.29e-13 / Id = 51.43 Expect = 1.43e-12 / Id = 51.96 Expect = 5.43e-12 / Id = 53.85 Expect = 2.06e-11 / Id = 53.41 Expect = 1.34e-10 / Id = 50.57 Expect = 2.28e-10 / Id = 47.52 Expect = 2.28e-10 / Id = 45.54 Sequence I3NMS1_HEVBR C6TFZ6_SOYBN E0CNZ3_VITVI I1JTS7_SOYBN I1K888_SOYBN A9PCJ9_POPTR I1MXG2_SOYBN K4BUJ4_SOLLC M5XFL8_PRUPE M1A1F5_SOLTU
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Sequences
The
following sequences are available for this feature:
mRNA sequence
>Ca_01606_v1.0_kabuli ID=Ca_01606_v1.0_kabuli; Name=Ca_01606; organism=Cicer arietinum; type=mRNA; length=312bp ATGGCTGCCACCACCACCACCTGCAGCGGTTTCTTCAATCTCCGATCATC CTCCTCCTCCTCCTCTAATGGTTGCGGAGGAAAGCTTAATTGGGTGGCTA TGTCGTTCATCAACGGTGTAACCATGGCATTTTTTGCATCTTTGAACCGT TGTTCTTGCATCCGCATAGCCACTGAAGAAGAAGACGGAGACGGAGACGA TGCTAACCCGTTGATGTTCAACGATGGTAATCTCCGCCACGATGGTGTCG ATTCAGTTACTGCAACCACCAGCAGGAGAAGGAACGGTAAAGGAAAGAAA AATGGTAAGTGA back to top protein sequence of Ca_01606_v1.0_kabuli
>Ca_01606_v1.0_kabuli ID=Ca_01606_v1.0_kabuli; Name=Ca_01606_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=103bp MAATTTTCSGFFNLRSSSSSSSNGCGGKLNWVAMSFINGVTMAFFASLNR CSCIRIATEEEDGDGDDANPLMFNDGNLRHDGVDSVTATTSRRRNGKGKK NGK back to top mRNA from alignment at Ca5:36196712..36197023-
Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_01606_v1.0_kabuli ID=Ca_01606_v1.0_kabuli; Name=Ca_01606; organism=Cicer arietinum; type=mRNA; length=312bp; location=Sequence derived from: Ca5:36196712..36197023- (Cicer arietinumATGGCTGCCACCACCACCACCTGCAGCGGTTTCTTCAATCTCCGATCATC
CTCCTCCTCCTCCTCTAATGGTTGCGGAGGAAAGCTTAATTGGGTGGCTA
TGTCGTTCATCAACGGTGTAACCATGGCATTTTTTGCATCTTTGAACCGT
TGTTCTTGCATCCGCATAGCCACTGAAGAAGAAGACGGAGACGGAGACGA
TGCTAACCCGTTGATGTTCAACGATGGTAATCTCCGCCACGATGGTGTCG
ATTCAGTTACTGCAACCACCAGCAGGAGAAGGAACGGTAAAGGAAAGAAA
AATGGTAAGTGA back to top Coding sequence (CDS) from alignment at Ca5:36196712..36197023-
>Ca_01606_v1.0_kabuli ID=Ca_01606_v1.0_kabuli; Name=Ca_01606; organism=Cicer arietinum; type=CDS; length=312bp; location=Sequence derived from: Ca5:36196712..36197023- (Cicer arietinum ATGGCTGCCACCACCACCACCTGCAGCGGTTTCTTCAATCTCCGATCATC CTCCTCCTCCTCCTCTAATGGTTGCGGAGGAAAGCTTAATTGGGTGGCTA TGTCGTTCATCAACGGTGTAACCATGGCATTTTTTGCATCTTTGAACCGT TGTTCTTGCATCCGCATAGCCACTGAAGAAGAAGACGGAGACGGAGACGA TGCTAACCCGTTGATGTTCAACGATGGTAATCTCCGCCACGATGGTGTCG ATTCAGTTACTGCAACCACCAGCAGGAGAAGGAACGGTAAAGGAAAGAAA AATGGTAAGTGA back to top