Ca_01786, Ca_01786_v1.0_kabuli (mRNA) Cicer arietinum
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_01786 vs. TrEMBL
Match: I1K8Y6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 345.125 bits (884), Expect = 6.293e-93 Identity = 164/194 (84.54%), Postives = 178/194 (91.75%), Query Frame = 1 Query: 1 MSFGSSLLSPPMHIVY-RKQNRTSRTLFKVSANVPDFLSADWFESRKKKPFGPRLDFTAEDAVHHQLQALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSSLFVEENKYKQRIWVRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDRDTFSGGVAY 579
MSFGSSLLS + + +NRTSR FK +A VPDFLSADWFESRKK+PFGPRLDF+AEDAVH+QL+ALKYNDQPR DYGIEVMYRFAGFDPFERS YFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMS+LFVEENKYKQR+W+RGSRPEEEEIFQFTM Q+VGGCWDGYWLTESLLHD DTF+GG+AY
Sbjct: 1 MSFGSSLLSHSHTLQFLSNRNRTSR--FKATAEVPDFLSADWFESRKKRPFGPRLDFSAEDAVHYQLEALKYNDQPRPDYGIEVMYRFAGFDPFERSPYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQFTMAQKVGGCWDGYWLTESLLHDTDTFAGGLAY 192
BLAST of Ca_01786 vs. TrEMBL
Match: I1JUG5_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 340.502 bits (872), Expect = 1.550e-91 Identity = 161/194 (82.99%), Postives = 174/194 (89.69%), Query Frame = 1 Query: 1 MSFGSSLLSPPMHIVY-RKQNRTSRTLFKVSANVPDFLSADWFESRKKKPFGPRLDFTAEDAVHHQLQALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSSLFVEENKYKQRIWVRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDRDTFSGGVAY 579
MSFGSSLLS + + NR + FK +A VPDFLSADWFESRKK PFGPRLDF+AEDAVH+QL+ALKYNDQPR DYGIEVMYRFAGFDPFERS YFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMS+LFVEENKYKQR+W+RGSRPEEEEIFQ TMVQ+VGGCWDGYWLTESLLHD DTF+GG+AY
Sbjct: 1 MSFGSSLLSHSHALRFLSNNNRNGTSRFKATAQVPDFLSADWFESRKKIPFGPRLDFSAEDAVHYQLEALKYNDQPRPDYGIEVMYRFAGFDPFERSPYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQLTMVQKVGGCWDGYWLTESLLHDTDTFAGGLAY 194
BLAST of Ca_01786 vs. TrEMBL
Match: C6TFN6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 338.191 bits (866), Expect = 7.693e-91 Identity = 160/194 (82.47%), Postives = 174/194 (89.69%), Query Frame = 1 Query: 1 MSFGSSLLSPPMHIVY-RKQNRTSRTLFKVSANVPDFLSADWFESRKKKPFGPRLDFTAEDAVHHQLQALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSSLFVEENKYKQRIWVRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDRDTFSGGVAY 579
MSFGSSLLS + + NR + FK +A VPDFLSADWFESRKK PFGPRLDF+AEDAVH+QL+ALKYNDQPR DYGIEVMYRFAGFDPFERS YFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMS+LFVEENKYKQR+W+RGSRPEEEEIFQ TMVQ+VGGCWDGYWLTESLL+D DTF+GG+AY
Sbjct: 1 MSFGSSLLSHSHALRFLSNNNRNGTSRFKATAQVPDFLSADWFESRKKIPFGPRLDFSAEDAVHYQLEALKYNDQPRPDYGIEVMYRFAGFDPFERSPYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQLTMVQKVGGCWDGYWLTESLLYDTDTFAGGLAY 194
BLAST of Ca_01786 vs. TrEMBL
Match: C6T2D1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 337.421 bits (864), Expect = 1.312e-90 Identity = 162/194 (83.51%), Postives = 176/194 (90.72%), Query Frame = 1 Query: 1 MSFGSSLLSPPMHIVY-RKQNRTSRTLFKVSANVPDFLSADWFESRKKKPFGPRLDFTAEDAVHHQLQALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSSLFVEENKYKQRIWVRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDRDTFSGGVAY 579
MSFGSSLLS + + +NRTSR FK +A VPDFLSAD FESRKK+PFGPRLDF+AEDAVH+QL+ALKYNDQPR DYGIEVMYRFAGFDPFERS YFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMS+L VEENKYKQR+W+RGSRPEEEEIFQFTM Q+VGGCWDGYWLTESLLHD DTF+GG+AY
Sbjct: 1 MSFGSSLLSHSHTLQFLSNRNRTSR--FKATAEVPDFLSADRFESRKKRPFGPRLDFSAEDAVHYQLEALKYNDQPRPDYGIEVMYRFAGFDPFERSPYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLLVEENKYKQRVWIRGSRPEEEEIFQFTMAQKVGGCWDGYWLTESLLHDTDTFAGGLAY 192
BLAST of Ca_01786 vs. TrEMBL
Match: M5XH49_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015477mg PE=4 SV=1) HSP 1 Score: 324.324 bits (830), Expect = 1.150e-86 Identity = 156/202 (77.23%), Postives = 171/202 (84.65%), Query Frame = 1 Query: 1 MSFGSSLLSP---------PMHIVYRKQNRTSRTLFKVSANVPDFLSADWFESRKKKPFGPRLDFTAEDAVHHQLQALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSSLFVEENKYKQRIWVRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDRDTFSGGVAY 579
MSF SSL P P + + T F+ SA+VPDFLSADW ESRKKKPFGPRL+F+AE+AV HQL ALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERK++SSLFVEEN++KQR+W+RGSRPEEEEIFQFTMVQRVGG WDGYWLTESLLHD D F+GG+AY
Sbjct: 1 MSFCSSLSYPNSLFLSKTKPFSAHIKPPTVSLGTRFRASADVPDFLSADWLESRKKKPFGPRLNFSAEEAVQHQLDALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKMLSSLFVEENRFKQRVWIRGSRPEEEEIFQFTMVQRVGGSWDGYWLTESLLHDGDAFAGGLAY 202
BLAST of Ca_01786 vs. TrEMBL
Match: B9H9R6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_819577 PE=4 SV=1) HSP 1 Score: 316.235 bits (809), Expect = 3.130e-84 Identity = 145/167 (86.83%), Postives = 160/167 (95.81%), Query Frame = 1 Query: 79 FKVSANVPDFLSADWFESRKKKPFGPRLDFTAEDAVHHQLQALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSSLFVEENKYKQRIWVRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDRDTFSGGVAY 579
F+ SA+VPDFLSADW ESR+KKPFGPRL+F+AE+AV+ QL ALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKI+SSLFV+EN++KQRIW+RG+RPEEEEIFQFTMVQRVGG WDGYWLTESLLHD D F+GG+AY
Sbjct: 34 FRASADVPDFLSADWLESRRKKPFGPRLNFSAEEAVNCQLDALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKILSSLFVKENRFKQRIWIRGNRPEEEEIFQFTMVQRVGGSWDGYWLTESLLHDGDAFAGGLAY 200
BLAST of Ca_01786 vs. TrEMBL
Match: Q6NM03_ARATH (At2g25605 OS=Arabidopsis thaliana GN=AT2G25605 PE=2 SV=1) HSP 1 Score: 315.849 bits (808), Expect = 4.089e-84 Identity = 150/200 (75.00%), Postives = 172/200 (86.00%), Query Frame = 1 Query: 1 MSFGSSLL-SPPMHIV-----YRKQNRTSRTLFKVSAN-VPDFLSADWFESRKKKPFGPRLDFTAEDAVHHQLQALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSSLFVEENKYKQRIWVRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDRDTFSGGVAY 579
MSFGS +L SPP + + R +R L + S++ VPDFLSADW ESR+K+PFGPRLDF+AEDAV HQL ALKYND PR DYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHS+YRVLLGHK+RK++SSLFVEEN++KQRIW++G+RPEEEEIF+FTM QR+GG WDGYWLTESLLHD D FSGG+AY
Sbjct: 1 MSFGSLVLPSPPSSLSANVKHFNGYGRLNRNLVRASSSDVPDFLSADWLESRRKRPFGPRLDFSAEDAVRHQLDALKYNDHPRDDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSSYRVLLGHKDRKLLSSLFVEENRFKQRIWIQGNRPEEEEIFEFTMFQRIGGSWDGYWLTESLLHDGDVFSGGMAY 200
BLAST of Ca_01786 vs. TrEMBL
Match: G7JBN9_MEDTR (NAD(P)H-quinone oxidoreductase subunit H OS=Medicago truncatula GN=MTR_3g107860 PE=4 SV=1) HSP 1 Score: 315.079 bits (806), Expect = 6.974e-84 Identity = 154/168 (91.67%), Postives = 159/168 (94.64%), Query Frame = 1 Query: 1 MSFGSSLLS-PPMHIVYRKQNRTSRTLFKVSANVPDFLSADWFESRKKKPFGPRLDFTAEDAVHHQLQALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSSLFVEENKYKQRIWVRGSRPEEEEIFQFTMVQRV 501
MSFG L S PP H+V RK+NRTS LFKVSANVPDFLSADWFESRKKKPFGP+LDFTAEDAVHHQL+ALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSSLFVEENKYKQRIWVRGSRPEEEEIFQFTMVQ +
Sbjct: 1 MSFGCCLFSSPPPHLVCRKRNRTS--LFKVSANVPDFLSADWFESRKKKPFGPKLDFTAEDAVHHQLEALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSSLFVEENKYKQRIWVRGSRPEEEEIFQFTMVQNI 166 HSP 2 Score: 64.3142 bits (155), Expect = 2.144e-8 Identity = 27/31 (87.10%), Postives = 28/31 (90.32%), Query Frame = 1 Query: 487 MVQRVGGCWDGYWLTESLLHDRDTFSGGVAY 579
M RVGGCWDGYWLTES+LHD DTFSGGVAY
Sbjct: 239 MKLRVGGCWDGYWLTESVLHDLDTFSGGVAY 269
BLAST of Ca_01786 vs. TrEMBL
Match: D7LL65_ARALL (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_667935 PE=4 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 4.520e-83 Identity = 147/199 (73.87%), Postives = 168/199 (84.42%), Query Frame = 1 Query: 1 MSFGSSLL-SPPMHIV-----YRKQNRTSRTLFKVSANVPDFLSADWFESRKKKPFGPRLDFTAEDAVHHQLQALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSSLFVEENKYKQRIWVRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDRDTFSGGVAY 579
MSF S +L SPP + + R R L + S++VPDF+SADW ESR+K+PFGPRLDF+A DAV HQL ALKYND PR DYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHS+YRVLL HK+RKI+SSLFVEEN++KQRIW++G+RPEEEEIF+FTM QR+GG WDGYWLTESLLHD D FSGG+AY
Sbjct: 1 MSFWSLVLPSPPSSLSAKLKPFNDSGRLHRNLVRASSDVPDFISADWLESRRKRPFGPRLDFSAGDAVRHQLDALKYNDHPRDDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSSYRVLLSHKDRKILSSLFVEENRFKQRIWIQGNRPEEEEIFEFTMFQRIGGSWDGYWLTESLLHDGDVFSGGMAY 199
BLAST of Ca_01786 vs. TrEMBL
Match: D7SUM3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g04730 PE=2 SV=1) HSP 1 Score: 311.227 bits (796), Expect = 1.007e-82 Identity = 148/200 (74.00%), Postives = 171/200 (85.50%), Query Frame = 1 Query: 1 MSFGSSLLSPPMHIVYRKQNRTSRTL-------FKVSANVPDFLSADWFESRKKKPFGPRLDFTAEDAVHHQLQALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSSLFVEENKYKQRIWVRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDRDTFSGGVAY 579
MSF SSL SP ++ K + + + SA+VPDFLSADW ESR+K+PFGPRL+F+AE+AV +QL ALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHS+YRVLL H+ERKI+SSL+V+EN++KQR+W+RG+RPEEEEIFQFTM QRVGG WDGYWLTESLLHD D+FSGGVAY
Sbjct: 1 MSFCSSLSSPQSISLFSKPFHGDKPVSVSLSSRIRASADVPDFLSADWLESRRKRPFGPRLNFSAEEAVQYQLDALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSSYRVLLCHRERKILSSLWVKENRFKQRVWIRGTRPEEEEIFQFTMFQRVGGSWDGYWLTESLLHDGDSFSGGVAY 200 The following BLAST results are available for this feature:
BLAST of Ca_01786 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25 Position : 0 Zoom : x 1
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BLAST of Ca_01786 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_01786_v1.0_kabuli ID=Ca_01786_v1.0_kabuli; Name=Ca_01786; organism=Cicer arietinum; type=mRNA; length=582bpback to top protein sequence of Ca_01786_v1.0_kabuli >Ca_01786_v1.0_kabuli ID=Ca_01786_v1.0_kabuli; Name=Ca_01786_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=193bpback to top mRNA from alignment at Ca5:34540344..34542305- Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_01786_v1.0_kabuli ID=Ca_01786_v1.0_kabuli; Name=Ca_01786; organism=Cicer arietinum; type=mRNA; length=1962bp; location=Sequence derived from: Ca5:34540344..34542305- (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca5:34540344..34542305- >Ca_01786_v1.0_kabuli ID=Ca_01786_v1.0_kabuli; Name=Ca_01786; organism=Cicer arietinum; type=CDS; length=582bp; location=Sequence derived from: Ca5:34540344..34542305- (Cicer arietinumback to top |