Ca_01802, Ca_01802_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_01802
Unique NameCa_01802_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length855
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca5chromosomeCa5:34428717..34432195 -Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR381Pisum sativum Cameor genome v1aPisum sativum
capsR382Pisum sativum Cameor genome v1aPisum sativum
capsR432Pisum sativum Cameor genome v1aPisum sativum
cavuR380Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR422Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR434Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR428Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR512Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ancaL0027Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0032Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0103Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0106Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0240Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0331Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0383Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0754Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0771Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0772Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0954Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL053Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL553Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL644Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR353Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR388Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR390Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR400Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR418Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR391Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR402Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR420Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR409Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR431Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR438Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR464Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR368Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR387Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR421Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR182Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR189Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL273Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL546Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL639Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL748Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR374Cicer arietinum
cacarR393Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
rna-XM_014644583.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
evm.model.Chr09.1663Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Psat05G0095700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigun09g204000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Tiffany.R1.2g151600.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Phvul.009G098000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Va04G062570.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
jg55471.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-TanjilR_13974Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
LR48_mrnaVigan04g212700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vfaba.Hedin2.R1.2g187840.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004501219.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_01802-CDS1Ca_01802-CDS1Cicer arietinumCDS
Ca_01802-CDS2Ca_01802-CDS2Cicer arietinumCDS
Ca_01802-CDS3Ca_01802-CDS3Cicer arietinumCDS
Ca_01802-CDS4Ca_01802-CDS4Cicer arietinumCDS
Ca_01802-CDS5Ca_01802-CDS5Cicer arietinumCDS
Ca_01802-CDS6Ca_01802-CDS6Cicer arietinumCDS
Ca_01802-CDS7Ca_01802-CDS7Cicer arietinumCDS
Ca_01802-CDS8Ca_01802-CDS8Cicer arietinumCDS
Ca_01802-CDS9Ca_01802-CDS9Cicer arietinumCDS
Ca_01802-CDS10Ca_01802-CDS10Cicer arietinumCDS
Ca_01802-CDS11Ca_01802-CDS11Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_01802_v1.0_kabuliCa_01802_v1.0_kabuliCicer arietinumpolypeptide


Homology
BLAST of Ca_01802 vs. SwissProt
Match: PPD5_ARATH (PsbP domain-containing protein 5, chloroplastic OS=Arabidopsis thaliana GN=PPD5 PE=1 SV=3)

HSP 1 Score: 321.627 bits (823), Expect = 3.683e-87
Identity = 150/216 (69.44%), Postives = 183/216 (84.72%), Query Frame = 1
Query:  205 VTLAEEEPKVASFVDEINAYSYIYPVQLPSKKFVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNSSLLKEKDKSKWTAKNVADSVLAEKSSLRVTSSERSAESSVLDAHSDEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYLGSTAERDGYLYSISASTLSPQWKSMGPLFEKTVSSFRLVSPTENYVPPFKDPWRFW 852
            V ++ EE K+ + VD+INAYSY YP+  PS+K VFKWVESRKPERYSSAAPLSP+ARLRIVSERVD+ DNL+IS++IGPPNS L   K+K  W+AK VADSVL++KS+LRVTSS+R  ESSVLDAH+ +IDGEPYWYYEYL+RKSP  ++E S +YRHY+ STAERDGYLY+I+ASTL  QW  MGP+ E+ V SFRL+ PT++YVPP+KDPWRFW
Sbjct:   83 VKMSGEELKMGTMVDDINAYSYAYPLDYPSEKLVFKWVESRKPERYSSAAPLSPDARLRIVSERVDLTDNLVISISIGPPNSRLTS-KEKKTWSAKEVADSVLSDKSALRVTSSQRLEESSVLDAHASDIDGEPYWYYEYLVRKSPTKIAEASKLYRHYISSTAERDGYLYTINASTLGKQWDKMGPVLERAVGSFRLLPPTDSYVPPYKDPWRFW 297          
BLAST of Ca_01802 vs. TrEMBL
Match: G7JBQ7_MEDTR (PsbP domain-containing protein OS=Medicago truncatula GN=MTR_3g108040 PE=4 SV=1)

HSP 1 Score: 394.43 bits (1012), Expect = 2.151e-107
Identity = 191/224 (85.27%), Postives = 209/224 (93.30%), Query Frame = 1
Query:  190 CPPFSVTLAEEEP---KVASFVDEINAYSYIYPVQLPSKKFVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNSSLLKEKDKSKWTAKNVADSVLAEKSSLRVTSSERSAESSVLDAHSDEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYLGSTAERDGYLYSISASTLSPQWKSMGPLFEKTVSSFRLVSPTENYVPPFKDPWRFW 852
            C P SV LA EE    K+ASF+DE+NAYSY+YP++LPSKKFVFKWVESRKPERYSSAAPLSPNARLRIVSERVD+FDNLIISVTIGPP+++L+  KDKSKWTAK+V DSVLA+KSSLRVTS +RSAESSVLDAHS+EIDGEPYWYYEYLIRKSPN+MSEESGIYRHY+ STAERDGYLYSISASTLSPQWK MGPL EKTVSSFRLVSPTENYVPP+KDPWRFW
Sbjct:   70 CSPISVALAGEEEQDHKMASFLDEVNAYSYLYPLELPSKKFVFKWVESRKPERYSSAAPLSPNARLRIVSERVDLFDNLIISVTIGPPSANLINLKDKSKWTAKDVVDSVLADKSSLRVTSVQRSAESSVLDAHSNEIDGEPYWYYEYLIRKSPNSMSEESGIYRHYVASTAERDGYLYSISASTLSPQWKKMGPLLEKTVSSFRLVSPTENYVPPYKDPWRFW 293          
BLAST of Ca_01802 vs. TrEMBL
Match: I1JUI8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 9.678e-100
Identity = 183/257 (71.21%), Postives = 210/257 (81.71%), Query Frame = 1
Query:   97 SEHRRDFSS-----SSQTTIFRRDXXXXXXXXXXXXCPPFSVTLAEEEPKVASFVDEINAYSYIYPVQLPSKKFVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNSSLLKEKDKSKWTAKNVADSVLAEKSSLRVTSSERSAESSVLDAHSDEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYLGSTAERDGYLYSISASTLSPQWKSMGPLFEKTVSSFRLVSPTENYVPPFKDPWRFW 852
            SE R  FS      +SQ  IFRRD             P  SVTLAEEEPK+ASF+DEINAYSY+YPV+LPS  F FKW+ESRKPERYSSAAPLSP+ARLRIVSERVD  DN+IISVTIGPPNSS +K KDKS+WTAK+VADSVLA++SSLRVTSS+R  ESSVL+ HS EIDGE YWYYEYL+RK+P  +++ES  YRHYL STAERDGYLYSISAST+SP+W+ +GP  +K VSSFRL+SPTENYVPP+KDPWRFW
Sbjct:   43 SEERPRFSCCALKPTSQNRIFRRDLMLLGLTSLSLPMP-LSVTLAEEEPKMASFLDEINAYSYMYPVELPSDNFSFKWIESRKPERYSSAAPLSPDARLRIVSERVDFIDNVIISVTIGPPNSSYIKSKDKSEWTAKDVADSVLADRSSLRVTSSQRLEESSVLNTHSSEIDGEMYWYYEYLVRKAPLRLTDESSTYRHYLASTAERDGYLYSISASTVSPRWEKLGPFLDKAVSSFRLLSPTENYVPPYKDPWRFW 298          
BLAST of Ca_01802 vs. TrEMBL
Match: I1K908_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 367.851 bits (943), Expect = 2.156e-99
Identity = 182/257 (70.82%), Postives = 209/257 (81.32%), Query Frame = 1
Query:   97 SEHRRDFSS-----SSQTTIFRRDXXXXXXXXXXXXCPPFSVTLAEEEPKVASFVDEINAYSYIYPVQLPSKKFVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNSSLLKEKDKSKWTAKNVADSVLAEKSSLRVTSSERSAESSVLDAHSDEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYLGSTAERDGYLYSISASTLSPQWKSMGPLFEKTVSSFRLVSPTENYVPPFKDPWRFW 852
            SE R  FS      +SQ  IFRRD             P  SVTLAEEEPK+ASF+DEINAYSY+YPV+LPS  F FKW+ESRKPERYSSAAPLSP+ARLRIVSER+D  DN+IISVTIGPPNSS +K KDKSKWTAK+VADSVLA++SSLRVTSS+R  ESSVL+ HS EIDGE YWYYEYL+RK+P  +++ES  YRHYL STAERDGYLYSISAST+SP W+ +GP  +K V+SFRL+SPTENYVPP+KDPWRFW
Sbjct:   40 SEERPRFSCCALKPTSQNRIFRRDLMLLGLTSLSPTMP-LSVTLAEEEPKMASFLDEINAYSYMYPVELPSDNFTFKWIESRKPERYSSAAPLSPDARLRIVSERLDFIDNVIISVTIGPPNSSYIKSKDKSKWTAKDVADSVLADRSSLRVTSSQRLEESSVLNTHSSEIDGEMYWYYEYLVRKAPLRLTDESSTYRHYLASTAERDGYLYSISASTVSPLWEKLGPFLDKAVNSFRLLSPTENYVPPYKDPWRFW 295          
BLAST of Ca_01802 vs. TrEMBL
Match: I3T9M5_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 3.678e-99
Identity = 172/216 (79.63%), Postives = 194/216 (89.81%), Query Frame = 1
Query:  205 VTLAEEEPKVASFVDEINAYSYIYPVQLPSKKFVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNSSLLKEKDKSKWTAKNVADSVLAEKSSLRVTSSERSAESSVLDAHSDEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYLGSTAERDGYLYSISASTLSPQWKSMGPLFEKTVSSFRLVSPTENYVPPFKDPWRFW 852
            VTLAEEEP +A+FVDE NAYSY+YP+++PSKKFVFKWVESRKPERYSSAAPLSPNARLRIVSERVDI DN++ISVTIGPPN  L+K  DK KWTAK+VADSVLA+KS+LRVTSS+R +ESSVLD H+ EIDGEPYWYYEYL+RKSP   + E  I+RHYL STAERDGYLYS+S S LSPQWK+MGP  EKTVSSFRL+SPTENYVPP+KDPWRFW
Sbjct:   19 VTLAEEEPNMATFVDETNAYSYMYPLEVPSKKFVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIIDNVLISVTIGPPNPGLVKLNDKKKWTAKDVADSVLADKSTLRVTSSQRLSESSVLDTHTGEIDGEPYWYYEYLVRKSPTNFAGEPNIFRHYLASTAERDGYLYSVSVSALSPQWKTMGPYLEKTVSSFRLISPTENYVPPYKDPWRFW 234          
BLAST of Ca_01802 vs. TrEMBL
Match: I1JUJ0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 353.984 bits (907), Expect = 3.222e-95
Identity = 178/257 (69.26%), Postives = 204/257 (79.38%), Query Frame = 1
Query:   97 SEHRRDFSS-----SSQTTIFRRDXXXXXXXXXXXXCPPFSVTLAEEEPKVASFVDEINAYSYIYPVQLPSKKFVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNSSLLKEKDKSKWTAKNVADSVLAEKSSLRVTSSERSAESSVLDAHSDEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYLGSTAERDGYLYSISASTLSPQWKSMGPLFEKTVSSFRLVSPTENYVPPFKDPWRFW 852
            SE R  FS      +SQ  IFRRD             P  SVTLAEEEPK+ASF+DEINAYSY+YPV+LPS  F FKW+ESRKPERYSSAAPLSP+ARLRIVSERVD  DN      IGPPNSS +K KDKS+WTAK+VADSVLA++SSLRVTSS+R  ESSVL+ HS EIDGE YWYYEYL+RK+P  +++ES  YRHYL STAERDGYLYSISAST+SP+W+ +GP  +K VSSFRL+SPTENYVPP+KDPWRFW
Sbjct:   43 SEERPRFSCCALKPTSQNRIFRRDLMLLGLTSLSLPMP-LSVTLAEEEPKMASFLDEINAYSYMYPVELPSDNFSFKWIESRKPERYSSAAPLSPDARLRIVSERVDFIDN------IGPPNSSYIKSKDKSEWTAKDVADSVLADRSSLRVTSSQRLEESSVLNTHSSEIDGEMYWYYEYLVRKAPLRLTDESSTYRHYLASTAERDGYLYSISASTVSPRWEKLGPFLDKAVSSFRLLSPTENYVPPYKDPWRFW 292          
BLAST of Ca_01802 vs. TrEMBL
Match: D7SUI6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g04310 PE=4 SV=1)

HSP 1 Score: 351.673 bits (901), Expect = 1.599e-94
Identity = 170/243 (69.96%), Postives = 197/243 (81.07%), Query Frame = 1
Query:  124 SSQTTIFRRDXXXXXXXXXXXXCPPFSVTLAEEEPKVASFVDEINAYSYIYPVQLPSKKFVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNSSLLKEKDKSKWTAKNVADSVLAEKSSLRVTSSERSAESSVLDAHSDEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYLGSTAERDGYLYSISASTLSPQWKSMGPLFEKTVSSFRLVSPTENYVPPFKDPWRFW 852
            +S+   +RRD              P S    EEE K+AS VD+INAYSY+YP++LPSKK VFKWVESRKPERYSSAAPLSP+ARLRIVSERVDI DNLIISVTIGPPNS  LK KDK  WTAK+VADSVLA+K++LR+TSS+R +ESSVLD H+ E+DGEPYWYYEYLIRKSP   ++ES IYRHY+ STAERDGYLYS++ ST+S QWK MGPL EK  SSFRL+ PTE+YVPP+KDPWRFW
Sbjct:   42 NSKIGFYRRDLILFGFSSSAALIFPPSGYGTEEEFKMASVVDDINAYSYLYPLELPSKKLVFKWVESRKPERYSSAAPLSPDARLRIVSERVDIIDNLIISVTIGPPNSQFLKSKDKGTWTAKDVADSVLADKAALRITSSQRMSESSVLDTHASEVDGEPYWYYEYLIRKSPTKSAQESNIYRHYVASTAERDGYLYSLNVSTISKQWKVMGPLLEKAASSFRLLPPTEDYVPPYKDPWRFW 284          
BLAST of Ca_01802 vs. TrEMBL
Match: A5BBL8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026424 PE=4 SV=1)

HSP 1 Score: 350.517 bits (898), Expect = 3.562e-94
Identity = 164/212 (77.36%), Postives = 188/212 (88.68%), Query Frame = 1
Query:  217 EEEPKVASFVDEINAYSYIYPVQLPSKKFVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNSSLLKEKDKSKWTAKNVADSVLAEKSSLRVTSSERSAESSVLDAHSDEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYLGSTAERDGYLYSISASTLSPQWKSMGPLFEKTVSSFRLVSPTENYVPPFKDPWRFW 852
            EEE K+AS VD+INAYSY+YP++LPSKK VFKWVESRKPERYSSAAPLSP+ARLRIVSERVDI DNLIISVTIGPPNS  LK KDK  WTAK+VADSVLA+K++LR+TSS+R +ESSVLD H+ E+DGEPYWYYEYLIRKSP   ++ES IYRHY+ STAERDGYLYS++ ST+S QWK MGPL EK  SSFRL+ PTE+YVPP+KDPWRFW
Sbjct:   57 EEEFKMASVVDDINAYSYLYPLELPSKKLVFKWVESRKPERYSSAAPLSPDARLRIVSERVDIIDNLIISVTIGPPNSQFLKSKDKGTWTAKDVADSVLADKAALRITSSQRMSESSVLDTHASEVDGEPYWYYEYLIRKSPTKSAQESNIYRHYVASTAERDGYLYSLNVSTISKQWKVMGPLLEKAASSFRLLPPTEDYVPPYKDPWRFW 268          
BLAST of Ca_01802 vs. TrEMBL
Match: M5XGD0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009525mg PE=4 SV=1)

HSP 1 Score: 346.665 bits (888), Expect = 5.144e-93
Identity = 163/219 (74.43%), Postives = 193/219 (88.13%), Query Frame = 1
Query:  196 PFSVTLAEEEPKVASFVDEINAYSYIYPVQLPSKKFVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNSSLLKEKDKSKWTAKNVADSVLAEKSSLRVTSSERSAESSVLDAHSDEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYLGSTAERDGYLYSISASTLSPQWKSMGPLFEKTVSSFRLVSPTENYVPPFKDPWRFW 852
            P S +LAEE+ K+A+FVDEIN+ SY+YPV+LPSKK +FKWVESRKPERYSSAAPLSP+ARLRIVSERVDI DNLIIS++IGPPNS ++K  DKS WTAK+VADSVLA+KS+LRVTSS+R AESSVLDAHS EI GEPYWYYEYL+RK+P   +EES  YRHY+ ST ERDGYLYSI+ASTL+ QW  +GP+ +KT++SF L+ PTENYVPP+KDPWRFW
Sbjct:   70 PSSGSLAEEDLKMATFVDEINSCSYLYPVELPSKKVIFKWVESRKPERYSSAAPLSPDARLRIVSERVDIVDNLIISISIGPPNSKIIKSLDKSTWTAKDVADSVLADKSALRVTSSQRMAESSVLDAHSGEIAGEPYWYYEYLVRKAPTKTAEESNNYRHYVASTTERDGYLYSINASTLNKQWNIVGPILQKTIASFHLLPPTENYVPPYKDPWRFW 288          
BLAST of Ca_01802 vs. TrEMBL
Match: B9H9F5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_654065 PE=4 SV=1)

HSP 1 Score: 338.576 bits (867), Expect = 1.401e-90
Identity = 163/243 (67.08%), Postives = 195/243 (80.25%), Query Frame = 1
Query:  124 SSQTTIFRRDXXXXXXXXXXXXCPPFSVTLAEEEPKVASFVDEINAYSYIYPVQLPSKKFVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNSSLLKEKDKSKWTAKNVADSVLAEKSSLRVTSSERSAESSVLDAHSDEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYLGSTAERDGYLYSISASTLSPQWKSMGPLFEKTVSSFRLVSPTENYVPPFKDPWRFW 852
            S Q    RRD              P S  LAEE+ K+AS VDEINAY+Y YP +LPSKKF+FKWVESRKPERYSSAAPLS +ARLRIVSERVDI DNLI+SV+IGPPN   +K KDK+ W AK+VADSVL++KSSLRVTS++R +ESS+LDAH++EIDGEPYW+YEY++RKSP   ++ES ++R Y+ STAERDGYLYS+SASTLS QW  MGP  EKTV+SFRL+ PT +YVPP+KDPWRFW
Sbjct:   53 SLQNGFCRRDLVLFGLSSSLSIAFPSSEILAEEDLKMASVVDEINAYTYSYPAELPSKKFLFKWVESRKPERYSSAAPLSSDARLRIVSERVDIIDNLILSVSIGPPNLQFVKSKDKNTWAAKDVADSVLSDKSSLRVTSTQRLSESSILDAHANEIDGEPYWFYEYIVRKSPTKNAQESNLFRRYIASTAERDGYLYSLSASTLSKQWDKMGPYLEKTVASFRLLPPTGDYVPPYKDPWRFW 295          
BLAST of Ca_01802 vs. TrEMBL
Match: K4CM08_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc08g067840.2 PE=4 SV=1)

HSP 1 Score: 337.806 bits (865), Expect = 2.389e-90
Identity = 164/244 (67.21%), Postives = 197/244 (80.74%), Query Frame = 1
Query:  124 SSQTTIFRRDXXXXXXXXXXXXCPPFSVTLAEEEPKVASFVDEINAYSYIYPVQLPSKKFVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNSSLLKEKDKSKWTAKNVADSVLAEKSSLRVTSSERSAESSVLDAHSDEIDGEPYWYYEYLIRKSPNTMSE-ESGIYRHYLGSTAERDGYLYSISASTLSPQWKSMGPLFEKTVSSFRLVSPTENYVPPFKDPWRFW 852
            +SQ  + RRD              PFS   AEEE K+ S VD+INAYSY+YP+++PSKKF FKWVE+RK ERYSSAAPLSP+ARLRIVSERVDI DNLIISV+IGPPNS  LK K+KS W+AK+VADSVL++KS+LRVTS++R AESS+LDAH+ EIDGE YWYYEYL+RKSP   +  E  ++RHY+ STAERDGYLY++SASTL  QW+ MGP  EKTV+SFRL+ PTE+YVPP+KDPWRFW
Sbjct:   52 TSQYGVSRRDLTFIALSSSLSLIFPFSGFTAEEELKMGSSVDDINAYSYLYPIEIPSKKFAFKWVETRKSERYSSAAPLSPDARLRIVSERVDIIDNLIISVSIGPPNSQFLKSKEKSTWSAKDVADSVLSDKSALRVTSTQRLAESSLLDAHASEIDGESYWYYEYLVRKSPTKAAALEPNLFRHYVASTAERDGYLYTLSASTLGKQWEKMGPSLEKTVASFRLLPPTESYVPPYKDPWRFW 295          
BLAST of Ca_01802 vs. DB:Swiss
Match: PPD5_ARATH (PsbP domain-containing protein 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD5 PE=1 SV=3)

HSP 1 Score: 321.627 bits (823), Expect = 2.723e-109
Identity = 150/216 (69.44%), Postives = 183/216 (84.72%), Query Frame = 1
Query:  205 VTLAEEEPKVASFVDEINAYSYIYPVQLPSKKFVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNSSLLKEKDKSKWTAKNVADSVLAEKSSLRVTSSERSAESSVLDAHSDEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYLGSTAERDGYLYSISASTLSPQWKSMGPLFEKTVSSFRLVSPTENYVPPFKDPWRFW 852
            V ++ EE K+ + VD+INAYSY YP+  PS+K VFKWVESRKPERYSSAAPLSP+ARLRIVSERVD+ DNL+IS++IGPPNS L   K+K  W+AK VADSVL++KS+LRVTSS+R  ESSVLDAH+ +IDGEPYWYYEYL+RKSP  ++E S +YRHY+ STAERDGYLY+I+ASTL  QW  MGP+ E+ V SFRL+ PT++YVPP+KDPWRFW
Sbjct:   83 VKMSGEELKMGTMVDDINAYSYAYPLDYPSEKLVFKWVESRKPERYSSAAPLSPDARLRIVSERVDLTDNLVISISIGPPNSRL-TSKEKKTWSAKEVADSVLSDKSALRVTSSQRLEESSVLDAHASDIDGEPYWYYEYLVRKSPTKIAEASKLYRHYISSTAERDGYLYTINASTLGKQWDKMGPVLERAVGSFRLLPPTDSYVPPYKDPWRFW 297          
The following BLAST results are available for this feature:
BLAST of Ca_01802 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
PPD5_ARATH3.683e-8769.44PsbP domain-containing protein 5, chloroplastic OS... [more]
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BLAST of Ca_01802 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7JBQ7_MEDTR2.151e-10785.27PsbP domain-containing protein OS=Medicago truncat... [more]
I1JUI8_SOYBN9.678e-10071.21Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I1K908_SOYBN2.156e-9970.82Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I3T9M5_LOTJA3.678e-9979.63Uncharacterized protein OS=Lotus japonicus PE=2 SV... [more]
I1JUJ0_SOYBN3.222e-9569.26Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
D7SUI6_VITVI1.599e-9469.96Putative uncharacterized protein OS=Vitis vinifera... [more]
A5BBL8_VITVI3.562e-9477.36Putative uncharacterized protein OS=Vitis vinifera... [more]
M5XGD0_PRUPE5.144e-9374.43Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
B9H9F5_POPTR1.401e-9067.08Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
K4CM08_SOLLC2.389e-9067.21Uncharacterized protein OS=Solanum lycopersicum GN... [more]

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BLAST of Ca_01802 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
PPD5_ARATH2.723e-10969.44PsbP domain-containing protein 5, chloroplastic OS... [more]
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InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002683Photosystem II PsbP, oxygen evolving complexPFAMPF01789PsbPcoord: 141..266
score: 9.6
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichGENE3D3.40.1000.10no descriptioncoord: 77..266
score: 1.1
IPR016124Mog1/PsbP/DUF1795, alpha/beta/alpha sandwichSUPERFAMILY55724Mog1p/PsbP-likecoord: 78..267
score: 2.7
NoneNo IPR availableSEGsegsegcoord: 12..29
score: NAcoord: 52..63
score
NoneNo IPR availableSEGsegsegcoord: 43..52
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_01802_v1.0_kabuli ID=Ca_01802_v1.0_kabuli; Name=Ca_01802; organism=Cicer arietinum; type=mRNA; length=855bp
ATGGTTGTACAGTCTCTATGTCTCTCTCCTTCGAACAACCTTATCTTCAG
GAACAACAACAACAACACTACAAAGGTAATCCTTAACCAAACCAAATCCG
AACACAGAAGGGACTTTTCTTCATCTTCTCAAACCACAATTTTCAGAAGG
GATTTGGTACTCTTAGGCCTCACTTCTCTATCTCTAACATGCCCTCCATT
TTCTGTTACTCTTGCTGAAGAAGAACCAAAAGTGGCTTCTTTTGTAGATG
AAATCAATGCCTATTCTTATATCTACCCTGTTCAACTGCCCTCTAAAAAA
TTTGTCTTCAAATGGGTAGAGTCCCGAAAGCCAGAACGATACTCATCGGC
TGCACCACTTTCTCCTAATGCACGGCTGCGTATTGTGTCTGAACGTGTTG
ATATCTTTGATAATCTCATCATTTCTGTCACGATAGGCCCTCCAAATTCA
AGCCTTCTAAAAGAGAAGGATAAGAGCAAATGGACTGCAAAAAATGTTGC
TGATTCAGTCTTAGCTGAAAAATCTTCACTGCGAGTTACTTCAAGTGAGC
GCTCAGCTGAGAGTTCAGTTCTCGATGCACATTCTGATGAAATTGATGGT
GAGCCTTACTGGTATTATGAATACCTTATTCGTAAATCGCCTAATACAAT
GTCTGAAGAATCGGGAATTTACCGGCATTATCTTGGTTCAACAGCAGAAA
GAGATGGTTATTTGTACTCCATCAGTGCTTCAACCCTCAGCCCACAGTGG
AAAAGTATGGGGCCTTTATTTGAAAAGACAGTGAGTTCATTCCGCCTTGT
CAGTCCAACAGAAAATTATGTTCCCCCATTCAAAGATCCCTGGAGATTTT
GGTGA
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protein sequence of Ca_01802_v1.0_kabuli

>Ca_01802_v1.0_kabuli ID=Ca_01802_v1.0_kabuli; Name=Ca_01802_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=284bp
MVVQSLCLSPSNNLIFRNNNNNTTKVILNQTKSEHRRDFSSSSQTTIFRR
DLVLLGLTSLSLTCPPFSVTLAEEEPKVASFVDEINAYSYIYPVQLPSKK
FVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNS
SLLKEKDKSKWTAKNVADSVLAEKSSLRVTSSERSAESSVLDAHSDEIDG
EPYWYYEYLIRKSPNTMSEESGIYRHYLGSTAERDGYLYSISASTLSPQW
KSMGPLFEKTVSSFRLVSPTENYVPPFKDPWRFW
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mRNA from alignment at Ca5:34428717..34432195-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_01802_v1.0_kabuli ID=Ca_01802_v1.0_kabuli; Name=Ca_01802; organism=Cicer arietinum; type=mRNA; length=3479bp; location=Sequence derived from: Ca5:34428717..34432195- (Cicer arietinum
ATGGTTGTACAGTCTCTATGTCTCTCTCCTTCGAACAACCTTATCTTCAG GTATTCACTCTCTTACTTCTTCTTCCATTTCTTTCTATATTAACAACTAT AACCCATTCATTACTATAATATTCTCATCAGGAACAACAACAACAACACT ACAAAGGTAATCCTTAACCAAACCAAATCCGAACACAGAAGGGACTTTTC TTCATCTTCTCAAACCACAATTTTCAGAAGGGATTTGGTACTCTTAGGCC TCACTTCTCTATCTCTAACATGCCCTCCATTTTCTGGTCTCTCTCTCTCT CTTTAATTTGCTGCTAGAATTGAATTGAGACACATTTGCTTTATCAACAT AATAATTCTTTCCTACTTTCTCTTGCAGTTACTCTTGCTGAAGAAGAACC AAAAGTGGCTTCTTTTGTAGATGAAATCAATGCCTATTCTTATATCTACC CTGTTCAACTGCCCTCTAAAAAATTTGTCTTCAAATGGTATGTCAACTAC CATATATGCATTTTATTTTCGGTCTCTTTTGTTTTTCACTTTTAATTGCA GAGCTGTCACATCATTTACCTTTTTTTCCAAGGTTTGTACTCTGTACATG AAATAGTGAGAACAGATTATCTTTAAATACATGATACAGATTGAAAACAA GGTGATAGTTTTGTAATTGAAATTGAAAATATAAAACTTTTTATGATATC AAAGAGACCCTTATTTCTTTGTTTATATTTGTTATGATCCCACTTTTATG GACAAAGTATTGTTTACTCTTTATGATGTCTTGGAGATATGTTAATGGCT AGTTATATGGTCGACATACTTATAATCTATGAAACACAAACACGACACTA ACACATAGATACCGGTAATAATTTAAAAAAATAGAAGTGATTGCATGTAA CTAGTTAGGTTGGGGCCATGTCGGACATTGGAACGCCTTTAATCCGAGGT GTTGGTGTTACATAGCTTATAATGATCCATTCAGCAATGTCAGTAATATG TTCAATAAACTTCTTGTCTCGATTGCTCTAACATTGTGTGCCATTGGAAC TATAACTGAGTTAATTGGTTTACAACTCCACTTTCTGCCTGGAAATTTTT CCTCAATTGTTGTAGGAAGCTAACTCTTTCCATATATTTAAAGGGTAGAG TCCCGAAAGCCAGAACGATACTCATCGGCTGCACCACTTTCTCGTAAGTT TTATTGTCTTCCTTTGCAAGACAATCATTTTTTTTATCAAAGAATTTGAA TTGAGATTGTGTTTCGTTGCAAACTTTTTTTGTTGTGCATCAAATTACTT TGATTTTTTGCATAATGATGATGGATGATTGCTTTGTAGTTTCCCTTTTC TGGATAAAAATTGCTCTGTAAATTCCATACAGCTAATGCACGGCTGCGTA TTGTGTCTGAACGTGTTGATATCTTTGATAATCTCATCATTTCTGTCACG GTATTTCTCCAACCTCAGACTTGTTGCATCAAATTTATTTATGCATTCAA TGCTTTATCAGTTTTTTGCATTAAATTCAGATAGGCCCTCCAAATTCAAG CCTTCTAAAAGAGAAGGATAAGAGCAAATGGACTGCAAAAAATGTTGCTG ATTCAGTCTTAGCTGAAAAATCTTCACTGGTAACTTTTGCTCTTTTCTCT TGGAAATTTGCGCTCATGCTATTCTTATTGAAAAAGAAGTTATACTTATT GGAATCAATTCTTACCCCACAAGCAATAGCTAGTCATCACCCATTACCCA CTAGAGCTTACTAAACCAAAAAGTATAACCTTAAACCAGATAAGCCATAA TAAAATGATCACATGAAGACCAACATGTGGTTGATCTGAGTGGTAAGGGA TTTGAGCACTTTAAGCTGGTCAAGGGTTAGATTTTTGACTCTTGCTATGG AGAAAATCTGGTTGGGAAGGGAGAACCCACCTTGTGTGCCCAACAGGTTT CTCGACGTCCAACAGAGAGTAGCCACTGACTTACAGTTGTGGATACTTCA TATCTAAATCATGGTTATAAAAAAAAATGATCACATAAATACTGGATGAC AGGTAAAACTTTTTAAGGTAGATGATAAGCTAACACGTTGAACAAATTTA TCTGTTTTGAGTATTTTCACATACCAGAGTTAAAAATGGTGCTCTACATG GTTGAAATATAGTTGCCTTTTGTGGCGTAGCTTAAGCATTGAAATTACAA GTTTTGGCATAATATTGGATAGAGGAAAGAAGTGAAATGTAACATCCTAT AAATATTTACATATTAATCAAGCCTTCTTAGCTTTTGGATGGTCATATTT GAAATGTCTTATATATGTTGCCGAGATCAATATGAATTCTAATGGTTTAT TTGAGCAATTGTATATATAAGTTAACATAGCCTTCAAGTTTATTTCTGAT ATTGTCAATATTTTGCAGCGAGTTACTTCAAGTGAGCGCTCAGCTGAGAG TTCAGTTCTCGATGCACATTCTGATGAAGTAAGATTCATGCATAATCATT ATTTATTGGTTTCCAACACACGCACACAAAAATGAACATGTAGCATCACA TCACATATATGACTCTTTATTAAATGAATTTGATATAAAAAGATATCTTC AAATAAGAAAAGAAAAATCTCCCAAAACATGTTATTTGTTTGTTATGGTA ATAAAAATATTTCAGAGATTGAAAATAGTGAAGCATTTACATATTTTAGA TCAAGTGTATGTATTGTTGAGCTTATCTGTGTCCTCACAGATTGATGGTG AGCCTTACTGGTATTATGAATACCTTATTCGTAAATCGCCTAATACAATG GTATGTATTTACTCTTGGTGCATTTTCTCTTTTGGGGAAGTTGTTGTATA TGTGACTTTTTTACTTTGGAATTGTGTATGATGTTTGTACAGTCTGAAGA ATCGGGAATTTACCGGCATTATCTTGGTTCAACAGCAGAAAGAGATGGTA TACCCTCTCAAATTATTGCTACTGTAGTACTGCAAACATGCATGCATACA TTATATCTATCTTATGCATTATAATGTTAATTTGTCCCAGTCTGCATAAA ATTGCTTGAAAGCTCCTGTTGAAAATCATTTTTTTCCTCTCCCATTCAAT GAGAGCCATTCTTGTTCTGAACATAAAAGGAAAGATCCAAAGAAAAATAA TATTTGTATTGGTATTGATTTTTAGAAATTCGCGTAAGTATCAACTTTTA TTAATTGTGTTTGATTGCAGGTTATTTGTACTCCATCAGTGCTTCAACCC TCAGCCCACAGTGGAAAAGTGTACTACTCACTCACTCACTCTCTTTCATC AATATCTTTTTATCTAATAATTTTATTATTATTTTTTCCTTTTTTTTTAA ACCTTAACATTCTAATAATTTTTTATGCAGATGGGGCCTTTATTTGAAAA GACAGTGAGTTCATTCCGCCTTGTCAGTCCAACAGAAAATTATGTTCCCC CATTCAAAGATCCCTGGAGATTTTGGTGA
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Coding sequence (CDS) from alignment at Ca5:34428717..34432195-

>Ca_01802_v1.0_kabuli ID=Ca_01802_v1.0_kabuli; Name=Ca_01802; organism=Cicer arietinum; type=CDS; length=855bp; location=Sequence derived from: Ca5:34428717..34432195- (Cicer arietinum
ATGGTTGTACAGTCTCTATGTCTCTCTCCTTCGAACAACCTTATCTTCAG
GAACAACAACAACAACACTACAAAGGTAATCCTTAACCAAACCAAATCCG
AACACAGAAGGGACTTTTCTTCATCTTCTCAAACCACAATTTTCAGAAGG
GATTTGGTACTCTTAGGCCTCACTTCTCTATCTCTAACATGCCCTCCATT
TTCTGTTACTCTTGCTGAAGAAGAACCAAAAGTGGCTTCTTTTGTAGATG
AAATCAATGCCTATTCTTATATCTACCCTGTTCAACTGCCCTCTAAAAAA
TTTGTCTTCAAATGGGTAGAGTCCCGAAAGCCAGAACGATACTCATCGGC
TGCACCACTTTCTCCTAATGCACGGCTGCGTATTGTGTCTGAACGTGTTG
ATATCTTTGATAATCTCATCATTTCTGTCACGATAGGCCCTCCAAATTCA
AGCCTTCTAAAAGAGAAGGATAAGAGCAAATGGACTGCAAAAAATGTTGC
TGATTCAGTCTTAGCTGAAAAATCTTCACTGCGAGTTACTTCAAGTGAGC
GCTCAGCTGAGAGTTCAGTTCTCGATGCACATTCTGATGAAATTGATGGT
GAGCCTTACTGGTATTATGAATACCTTATTCGTAAATCGCCTAATACAAT
GTCTGAAGAATCGGGAATTTACCGGCATTATCTTGGTTCAACAGCAGAAA
GAGATGGTTATTTGTACTCCATCAGTGCTTCAACCCTCAGCCCACAGTGG
AAAAGTATGGGGCCTTTATTTGAAAAGACAGTGAGTTCATTCCGCCTTGT
CAGTCCAACAGAAAATTATGTTCCCCCATTCAAAGATCCCTGGAGATTTT
GGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR002683PsbP_C
IPR016123Mog1/PsbP_a/b/a-sand
IPR016124Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0009523photosystem II
GO:0009654photosystem II oxygen evolving complex
GO:0019898extrinsic component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0015979photosynthesis