Ca_01839, Ca_01839_v1.0_kabuli (mRNA) Cicer arietinum
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_01839 vs. SwissProt
Match: AFR_ARATH (F-box protein AFR OS=Arabidopsis thaliana GN=AFR PE=1 SV=2) HSP 1 Score: 286.574 bits (732), Expect = 1.695e-76 Identity = 157/355 (44.23%), Postives = 212/355 (59.72%), Query Frame = 1 Query: 7 EKRYNTEHEELIPQLPNEIAEICLLHVPYPYHCLVRSVSSSWNRAITNPSFLLSKRSFS--RPNIFVSAFHTLTAKIQWQSLDPSTGRWFXXXXXXXXXXXXA------CVSLPRQGKIFLI---KETESTLVYNSAINRWLPASDMISENSVFAADEVSGGIVTAEKS-GTN--------IYDSESDTWRRGAKFTGELERYETVVAGGKMYVTEGWSWPFVVRPKGGVYDLESDTWREMRNGMSDGWIGVSVGVCGRVFVIPEL-DLPLRVYDEVSDTWRGVSGDLFPRDVMKKPLVAKGLDDRIYVVSHGLNVAIGTVVVNNECSTVNVTWQVVEASLSFREFSPSTCQVLY 1008
E+ T+ + LI LPN+IAE+CLL +PYPYH L RSVSSSWN+ ITNP FL SK+S S P +FV AF+ TA+IQWQSLD ++GRWF + C S+PRQGK+F++ S +VY + NRW S M+S + F + V+G I+ S G N YD ++DTW K L +Y++ V G +M VTEGW+WPF+ P G VYD + TWREM GM +GW GVSV + R+FVI E D P++VY DTWR VSG+ + M++P G DDR++VV+ G+NVA G V + +V W++V + S +FSP++C VLY
Sbjct: 18 EEETRTKSQPLISGLPNDIAELCLLRLPYPYHALYRSVSSSWNKTITNPRFLFSKQSLSISSPYLFVFAFNKSTARIQWQSLDLASGRWFVLPPMPNSFTKISSPHALSCASMPRQGKLFVLGGGDVNRSAVVYTALTNRWSCISPMMSPRTYFVSGNVNGKIMAVGGSVGGNGEATTEVESYDPDNDTWTVVKKLPMVLAKYDSAVIGKEMCVTEGWAWPFMFPPMGQVYDSDEGTWREMSGGMKEGWTGVSVVIRDRLFVISEHGDFPMKVYCSDDDTWRYVSGEKLQGEKMRRPFAVTGADDRVFVVASGINVAEGR-VSEGQNGDFSVEWRMVSSPKSSIQFSPASCHVLY 371
BLAST of Ca_01839 vs. SwissProt
Match: FBK17_ARATH (F-box/kelch-repeat protein At1g30090 OS=Arabidopsis thaliana GN=At1g30090 PE=2 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 1.266e-47 Identity = 110/351 (31.34%), Postives = 173/351 (49.29%), Query Frame = 1 Query: 31 EELIPQLPNEIAEICLLHVPYPYHCLVRSVSSSWNRAITNPSFLLSKRS---FSRPNIFVSAFHTLTAKIQWQSLDPSTGRWFXXXXXXXXXXXXA----CVSLPRQGKIF----LIKETES----TLVYNSAINRWLPASDMISENSVFAADEVSGGIVTAEKSGTNIYDSE--------SDTWRRGAKFTGELERYETVVAGGKMYVTEGWSWPFVVRPKGGVYDLESDTWREMRNGMSDGWIGVSVGVCGRVFVIPELD-LPLRVYDEVSDTWRGVSGDLFPRDVMKKPLVAKGLDDRIYVVSHGLNVAIGTVVVNNECSTVNVTWQVVEASLSFREFSPSTCQVLYA 1011
E LIP LP+++A CLL VP H +SV W+ +KR F P +FV F T KIQW+ LD W VS+PR+G +F ++ +++ L Y+ N W + MI+ S FA+ + G I A + ++Y+ + WR + + Y+T V GK+ VTEGW WPF V P+G VYD +D W M G+ +GW G SV + R+F++ EL+ + ++VYD V+D+W ++G P + +P +R+YVV L++A+G + + + V W+VVE+ + + +PS Q+L+A
Sbjct: 51 EPLIPGLPDDVALNCLLRVPVQSHVSSKSVCKRWHLLFGTKETFFAKRKEFGFKDPWLFVVGFSRCTGKIQWKVLDLRNLTWHEIPAMPCRDKVCPHGFRSVSMPREGTMFVCGGMVSDSDCPLDLVLKYDMVKNHWTVTNKMITARSFFASGVIDGMIYAAGGNAADLYELDCAEVLNPLDGNWRPVSNMVAHMASYDTAVLNGKLLVTEGWLWPFFVSPRGQVYDPRTDQWETMSMGLREGWTGTSVVIYDRLFIVSELERMKMKVYDPVTDSWETINGPELPEQIC-RPFAVNCYGNRVYVVGRNLHLAVGNIWQSE--NKFAVRWEVVESPERYADITPSNSQILFA 398
BLAST of Ca_01839 vs. SwissProt
Match: FBK22_ARATH (F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana GN=At1g55270 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.727e-12 Identity = 69/286 (24.13%), Postives = 111/286 (38.81%), Query Frame = 1 Query: 10 KRYNTEHEE------LIPQLPNEIAEICLLHVPYPYHCLVRSVSSSWNRAITNPSFLLSKRSFSRPNIFVSAF-HTLTAKIQWQSLDPSTGRW---------FXXXXXXXXXXXXACVSLPRQGKIFLIKETESTLVYNSAINRWLPASDMISE----------NSVFAADEVSGGIVTAEKSGTNIYDSESDTWRRGAKFTGELERYETVVAGGKMYVTEGWSWPFVVRPKGGVYDLESDTWREMRNGMSDGWIGVSVGVCGRVFVIPELD-LPLRVYDEVSDTW 786
+R N++ E L+P LP+++A CL+ VP H +R V W R + F ++ +V F KI W + DP + W + C GK L + YN+ N+W A DM+ + N ++ A GI +S +YD + W A + + VV K ++ S V+ YD E ++W + +GM GW + GR++ + D LRV+DE +D+W
Sbjct: 63 RRKNSKRERTRIQPPLLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLASGNFFYSQRKLLGMSEEWVYVFKRDRDGKISWNTFDPISQLWQPLPPVPREYSEAVGFGCAVLSGCHLYLFGGKDPLRGSMRRVIFYNARTNKWHRAPDMLRKRHFFGCCVINNCLYVAGGECEGIQRTLRS-AEVYDPNKNRWSFIADMSTAMVPLIGVVYDKKWFLKGLGSHQLVM---SEAYDPEVNSWSPVSDGMVAGWRNPCTSLNGRLYGLDCRDGCKLRVFDESTDSW 344
BLAST of Ca_01839 vs. SwissProt
Match: FBK8_ARATH (F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana GN=At1g22040 PE=2 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 6.790e-9 Identity = 80/390 (20.51%), Postives = 140/390 (35.90%), Query Frame = 1 Query: 4 EEKRYNTEHEE-----LIPQLPNEIAEICLLHVPYPYHCLVRSVSSSWNRAITNPSFLLSKRSFSRPNIFVSAFHTLT--------------AKIQWQSLDPS-------------TGRW----------------FXXXXXXXXXXXXACVSLPRQGKIFLI------KETESTLVYNSAINRWLPASDMISENS-------------VFAADEVSGGIVTAEKSGTNIYDSESDTWRR-------------GAKFTGELERYETVVA--GGKMYVTEG-WSWPFVVRPKGGVYDLESDTWREMRNGMSDGWIGVSVGVCGRVFVIPEL----------DLPLRVYDEVSDTWRGVSGDLFPRDV--MKKPLVAKGLDDRIYVVSHGLN 888
+ ++ ++E++E LIP LP+E++ L +P + VR VS W A++ ++ R ++ + LT +WQ L P +G W C G +++I K ++ +N W S M++ + V D GG+ + + +YD +D W A L+ T + G++ V + +SWPF V G VYD E++ W EM +GM +GW G V V EL + ++VYD+ DTW+ V G++ D+ + P + G +++ ++ N
Sbjct: 27 KRRKISSENDEEECCRLIPSLPDELSIQILARLPRICYSSVRLVSRRWRSAVSTSEVYSLRKELGRTEEWL---YVLTKGHEDKLLWYALDPVSTKWQRLPPMPVVVYEEESRKSLSGLWNMITPSFNVGAIVRSFLGRRDSSEQMPFCGCAIGAVDGGLYVIGGLSRSKTVSCVWRFDPILNSWSEVSSMLASRAYSKTGVLNKKLYVVGGVDRGRGGLSPLQSA--EVYDPSTDAWSEVPSMPFSKAQVLPNAFLADLLKPIATGMTCYNGRLCVPQSLYSWPFFVDVGGEVYDPETNLWVEMPSGMGEGWPARQAGTKLSVVVDGELYAFDPSSSMENGKIKVYDQKEDTWKVVIGEVPVYDLTDSESPYLLAGFHGKLHFITRDPN 411
BLAST of Ca_01839 vs. TrEMBL
Match: G7JCD6_MEDTR (F-box protein AFR OS=Medicago truncatula GN=MTR_3g108860 PE=4 SV=1) HSP 1 Score: 426.787 bits (1096), Expect = 5.265e-117 Identity = 218/341 (63.93%), Postives = 260/341 (76.25%), Query Frame = 1 Query: 7 EKRYNTEHEELIPQLPNEIAEICLLHVPYPYHCLVRSVSSSWNRAITNP-SFLLSKRS--FSRPNIFVSAFHTLTAKIQWQSLDPSTGRWFXXXXXXXXXXXX-ACVSLPRQGKIFLIK-ETESTLVYNSAINRWLPASDMISENSVFAADEVSGGIVTAEKSGTNIYDSESDTWRRGAKFTGELERYETVVAGGKMYVTEGWSWPFVVRPKGGVYDLESDTWREMRNGMSDGWIGVSVGVCGRVFVIPELDLPLRVYDEVSDTWRGVSGDLFPRDVMKKPLVAKGLDDRIYVVSHGLNVAIGTVVVNNECSTVNVTWQVVEA-SLSFREFSPSTCQVLYA 1011
EK +N HEELIP LPNEIAEICLLHVPYPY LVRSVSSSWNRAITNP SFLLSK++ S P++FV A +T+T+KIQWQSLDPS+ RWF A SLP GKIF I ++ STLVY +A+N+W +MI+ S AA+EV G IVT +SGT IYD ESDTW+RGA+FTGEL RYETVV GGKMY+TEGW WPF VRP+G VY+LESDTW +MR GM DGW GVSV VCGRV +IPE+DLP++VYDE++DTWR V G+ PR+ MKKP +AKGL+D+IYVV HGL V IG VVV ++ V VTWQV+E + +F E SPS+CQV+YA
Sbjct: 7 EKEHNKVHEELIPGLPNEIAEICLLHVPYPYQPLVRSVSSSWNRAITNPPSFLLSKKTKTLSHPHLFVLAVNTVTSKIQWQSLDPSSNRWFMLPSMPLVCPTAFASASLPHNGKIFFIGGKSSSTLVYRTAVNKWSTVPEMITGKSFSAAEEVKGKIVTVGESGTGIYDPESDTWKRGAQFTGELRRYETVVNGGKMYLTEGWWWPFAVRPRGWVYELESDTWSKMREGMKDGWTGVSVTVCGRVLMIPEVDLPVKVYDEMTDTWRCVGGERLPRNGMKKPFIAKGLEDQIYVVWHGLKVVIGNVVVVDD-DHVKVTWQVLEGPAEAFGELSPSSCQVVYA 346
BLAST of Ca_01839 vs. TrEMBL
Match: K7KTQ4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 384.415 bits (986), Expect = 2.996e-104 Identity = 200/341 (58.65%), Postives = 238/341 (69.79%), Query Frame = 1 Query: 25 EHEELIPQLPNEIAEICLLHVPYPYHCLVRSVSSSWNRAITNPSFLLSKRSFSRPNIFVSAFHTLTAKIQWQSLDPSTGRWFXXXXXXXXXXXX----ACVSLPRQGKIFLIK---ETESTLVYNSAINRWLPASDMIS--ENSVFAADEVSGGIVTAEKSGTNIYDSESDTWRRGAKFTGELERYETVVAGGKMYVTEGWSWPFVVRPKGGVYDLESDTWREMRNGMSDGWIGVSVGVCGRVFVIPEL-DLPLRVYDEVSDTWRGVSGDLFPRDVMKKPLVAKGLDDRIYVVSHGLNVAIG--TVVVNNECSTVNVTWQVVEASLSFREFSPSTCQVLYA 1011
E EELIP LP EIAE+CLLHVPYPY L RSVSS+WNRAIT+PSF+ SK++ S P++FV AFH+ T KIQWQ+LDPS+GRWF A +LPRQGK+F+I E TLVY +A N+W A+ FAA+ V G IV GT+IYD ESDTWR G GELERYE V AGGK+YV+EGW WPF++ P+G VY+ E DTWREM +GM +GW GVSV V GRVFVI E D P++VYDE DTWR V G FPRDV+K+P A GL+DRIYV S LNVAIG V VN+ V+VTW+VVEA +FREFSPS+CQ+LYA
Sbjct: 59 EKEELIPGLPYEIAELCLLHVPYPYQALSRSVSSTWNRAITHPSFIYSKKTLSHPHLFVLAFHSQTGKIQWQALDPSSGRWFVLPQMPLPENTSSTAFASAALPRQGKLFVIAGGGEGSDTLVYRAATNQWALAAPTPGGRRRGFFAAEGVEGKIVAVGSGGTDIYDPESDTWREGKTLGGELERYEVVAAGGKVYVSEGWWWPFMLSPRGWVYETERDTWREMGSGMREGWSGVSVAVGGRVFVIAEYGDAPVKVYDEEFDTWRYVKGGRFPRDVIKRPFCATGLEDRIYVASLDLNVAIGKINVGVNSNNEQVSVTWEVVEAPRAFREFSPSSCQMLYA 399
BLAST of Ca_01839 vs. TrEMBL
Match: I1JUM8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 342.043 bits (876), Expect = 1.705e-91 Identity = 179/320 (55.94%), Postives = 217/320 (67.81%), Query Frame = 1 Query: 94 PYHCLVRSVSSSWNRAITNPSFLLSKRSFSRPNIFVSAFHTLTAKIQWQSLDPSTGRWFXXXXXXXXXXXX----ACVSLPRQGKIFLIKET---ESTLVYNSAINRWLPASDMIS--ENSVFAADEVSGGIVTAEKSGTNIYDSESDTWRRGAKFTGELERYETVVAGGKMYVTEGWSWPFVVRPKGGVYDLESDTWREMRNGMSDGWIGVSVGVCGRVFVIPEL-DLPLRVYDEVSDTWRGVSGDLFPRDVMKKPLVAKGLDDRIYVVSHGLNVAIGTV----VVNNECSTVNVTWQVVEASLSFREFSPSTCQVLYA 1011
P V SS+WNRAIT+PSF+ SK++ SRP++FV AFH+ T KIQWQ+LDPS+GRWF AC +LP QGK+F++ TLVY +A N+W A+ M + FAA+ V G IV +SGT+IYD ESDTWR G K GEL+RYE V AGGK+YV+EGW WPF+ RP+G VY+ E DTWREM GM DGW GVSV V GRVFVI E D P+RVYDE DTWR V G FPRDV+K+P +A GLD+RIYV S+ LNVAIG + + V+VTW+VVEA +FREFSP TCQVLYA
Sbjct: 32 PLPSFVALCSSTWNRAITHPSFIFSKKTLSRPHLFVLAFHSQTGKIQWQALDPSSGRWFVLPQMPLQENSCPTEFACAALPHQGKLFVMAGGGGGSDTLVYRAATNQWALAAPMPGGRKRGFFAAEGVEGKIVAVGRSGTDIYDPESDTWREGKKQGGELKRYEVVAAGGKVYVSEGWWWPFMYRPRGWVYETEKDTWREMGVGMRDGWSGVSVAVGGRVFVIAEYGDAPVRVYDEEQDTWRYVKGGSFPRDVIKRPFLATGLDNRIYVASYNLNVAIGKMKSDRIQGKGDFEVSVTWEVVEAPSAFREFSPCTCQVLYA 351
BLAST of Ca_01839 vs. TrEMBL
Match: B9ILF7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_825819 PE=4 SV=1) HSP 1 Score: 326.25 bits (835), Expect = 9.684e-87 Identity = 171/360 (47.50%), Postives = 229/360 (63.61%), Query Frame = 1 Query: 4 EEKRYNTEHEELIPQLPNEIAEICLLHVPYPYHCLVRSVSSSWNRAITNPSFLLSKR--SFSRPNIFVSAFHTLTAKIQWQSLDPSTGRWFXXXXXXXXXXXX----ACVSLPRQGKIFLI----KETE----STLVYNSAINRWLPASDMISENSVFAADEVSGGIVTAEKSGTNI---------YDSESDTWRRGAKFTGELERYETVVAGGKMYVTEGWSWPFVVRPKGGVYDLESDTWREMRNGMSDGWIGVSVGVCGRVFVIPEL-DLPLRVYDEVSDTWRGVSGDLFPRDVMKKPLVAKGLDDRIYVVSHGLNVAIGTVVVNNECSTVNVTWQVVEASLSFREFSPSTCQVLYA 1011
+EK E LIP LP+E+AE+CLL++PYPY LVRSVSSSWNRAIT+P+FL+SK+ S S P++FV AFH TA+IQWQ+LDP +GRWF AC SLPRQGK+ ++ +TE ST +Y S+ N+W S M++ S FA V G I+ S + I Y+SES W AK L RY++ V G +MYVTEGW+WPF+ P+ G+YD + DTW+EM NGM +GW G+SV + R+FVI E D P++VY DTW+ V GD FPR+ M++P G++ ++YVVS GLNVA+G+V ++ V WQV+ A +F +F+PS CQVLYA
Sbjct: 8 QEKTEEKHVEPLIPGLPDEVAELCLLYLPYPYQALVRSVSSSWNRAITDPAFLVSKKTLSLSLPHVFVLAFHKSTARIQWQALDPRSGRWFVLPPMPCPKTVCPPAFACTSLPRQGKLLVLGGMRSDTETSMDSTFIYRSSTNQWSIGSPMLTPRSFFATGNVKGKIIAVGGSASGISDSITAVECYNSESGKWGPAAKMRMGLARYDSAVVGNRMYVTEGWTWPFMFSPRAGIYDADKDTWQEMSNGMREGWTGLSVVLGDRLFVISEHGDCPMKVYVPDLDTWQYVGGDRFPREAMQRPFAVNGVEGKVYVVSCGLNVAVGSVYEADK-GEFCVKWQVLVAPRAFHDFAPSNCQVLYA 366
BLAST of Ca_01839 vs. TrEMBL
Match: M4CUE8_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra007843 PE=4 SV=1) HSP 1 Score: 304.294 bits (778), Expect = 3.941e-80 Identity = 163/360 (45.28%), Postives = 219/360 (60.83%), Query Frame = 1 Query: 4 EEKRYNTEHEELIPQLPNEIAEICLLHVPYPYHCLVRSVSSSWNRAITNPSFLLSKRSFS--RPNIFVSAFHTLTAKIQWQSLDPSTGRWFXXXXXXXXXXXXA------CVSLPRQGKIFLI---KETESTLVYNSAINRWLPASDMISENSVFAADEVSGGIVTAEKS---------GTNIYDSESDTWRRGAKFTGELERYETVVAGGKMYVTEGWSWPFVVRPKGGVYDLESDTWREMRNGMSDGWIGVSVGVCGRVFVIPEL-DLPLRVYDEVSDTWRGVSGDLFPRDVMKKPLVAKGLDDRIYVVSHGLNVAIGTVVVNNECSTVNVTWQVVEASLSFR----EFSPSTCQVLY 1008
EE+ T+ + LIP LPNEIAE+CLL +PYPYH L+RSVSSSWN IT+PSFL SK+S S P +FV +F+ TAK+QWQSLD S+GRWF + C S+PRQGK+F++ + + S +VY + NRW AS M+S + F + ++G I S YD ESDTW+ A+ + +Y++ V G +M VTEGW+WPF+ P G VYD + DTWREM GM +GW GVSV V GR+FVI E D P++VY DTWR VSG+ P M++P G++DR++VV GLNVA G V + +V W++V + S +FSP++C VLY
Sbjct: 13 EEEETRTKTQPLIPGLPNEIAELCLLRLPYPYHALLRSVSSSWNTTITSPSFLHSKQSLSISSPYLFVFSFNKSTAKVQWQSLDLSSGRWFVLPPMPSSFAKISSPHALSCASIPRQGKLFVLGGGESSRSAVVYTALTNRWSLASPMLSPRTYFVSGNLNGKITAVGGSLDGGGEATKDVESYDPESDTWKESARLPMVMAKYDSAVIGKEMLVTEGWAWPFMFPPMGHVYDSDEDTWREMSGGMKEGWTGVSVVVRGRLFVISEHGDFPMKVYSSDDDTWRYVSGEKLPGKTMRRPFAVAGVEDRVFVVGEGLNVAEGR-VNEGQNGEFSVEWRMVTFTSSSHQARTQFSPASCHVLY 371
BLAST of Ca_01839 vs. TrEMBL
Match: F6H3A2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g02380 PE=4 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 1.268e-78 Identity = 159/348 (45.69%), Postives = 211/348 (60.63%), Query Frame = 1 Query: 31 EELIPQLPNEIAEICLLHVPYPYHCLVRSVSSSWNRAITNPSFLLSKR--SFSRPNIFVSAFHTLTAKIQWQSLDPSTGRWFXXXXXXXXXXXX----ACVSLPRQGKIFLIKETES-------TLVYNSAINRWLPASDMISENSVFAADEVSGGIVTAEKSGTNI---------YDSESDTWRRGAKFTGELERYETVVAGGKMYVTEGWSWPFVVRPKGGVYDLESDTWREMRNGMSDGWIGVSVGVCGRVFVIPEL-DLPLRVYDEVSDTWRGVSGDLFPRDVMKKPLVAKGLDDRIYVVSHGLNVAIGTVVVNNECSTVN---VTWQVVEASLSFREFSPSTC 996
+ELIP LP EIAE+CLLHVPYPY L RSVSSSWN+AIT+PSFLLSK+ S S+P +FV A T++IQWQ+LDP +GRWF AC SLP GK+F++ + S T++Y ++ N+W AS M + + FAA ++G I A G + YD SDTW AK L RY+ V G K+YVTEGW+WPF P+GGVYD + DTW+EM GM +GW G+SV + R+FV+ E D ++VY DTW V G FP + +++P ++DRIYVVS GL+VA+G V E S + V W+V+ A ++F +FSP C
Sbjct: 18 DELIPGLPEEIAELCLLHVPYPYQALARSVSSSWNKAITDPSFLLSKKILSLSQPYLFVFASSKSTSRIQWQALDPRSGRWFVLPPMPCSAAACPPGLACASLPEDGKLFVLGDLRSDGTSLHTTIMYRASTNQWSLASPMRTPRTFFAAGSINGKIFAAGGRGLGVEDSIPTVERYDPVSDTWAAVAKMRSGLARYDAAVVGNKLYVTEGWTWPFSFSPRGGVYDGDRDTWQEMSLGMREGWTGISVVLRNRLFVLSEYGDCRMKVYVPDHDTWHPVGGGRFPCEALQRPFAVSTMEDRIYVVSRGLHVAVGKVHETVEASQSHHLWVEWEVMAAPIAFSDFSPCNC 365
BLAST of Ca_01839 vs. TrEMBL
Match: R0HTH4_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10023458mg PE=4 SV=1) HSP 1 Score: 298.13 bits (762), Expect = 2.824e-78 Identity = 162/356 (45.51%), Postives = 213/356 (59.83%), Query Frame = 1 Query: 4 EEKRYNTEHEELIPQLPNEIAEICLLHVPYPYHCLVRSVSSSWNRAITNPSFLLSKRSFS--RPNIFVSAFHTLTAKIQWQSLDPSTGRWFXXXXXXXXXXXXA------CVSLPRQGKIFLIKETE---STLVYNSAINRWLPASDMISENSVFAADEVSGGIVTAEKSGTNI---------YDSESDTWRRGAKFTGELERYETVVAGGKMYVTEGWSWPFVVRPKGGVYDLESDTWREMRNGMSDGWIGVSVGVCGRVFVIPEL-DLPLRVYDEVSDTWRGVSGDLFPRDVMKKPLVAKGLDDRIYVVSHGLNVAIGTVVVNNECSTVNVTWQVVEASLSFREFSPSTCQVLY 1008
E + T+ + LIP LPNEIAE+CLL +PYPYH L RSVSSSWNR ITNP FL SK+S S P +FV AF+ TAKIQWQS D ++GRWF + C S+PRQGK+F++ + S +VY + NRW S MIS + F A V+G I+ S YD E+DTW + L +Y++ V G +M VTEGW+WPF+ P G VYD + +TWREM GM +GW GVSV + GR+FVI E D P++VY DTWR VSG+ P + M++P G DR++VV+ G+NVA G V + +V W++V + SF FSP++C VLY
Sbjct: 17 EHQETITKTQPLIPGLPNEIAELCLLRLPYPYHALFRSVSSSWNRTITNPRFLFSKQSLSISSPYLFVFAFNKSTAKIQWQSFDLASGRWFVLPPMPNSFTKISSPHALSCASIPRQGKLFVLGGGDCNRSAVVYTALTNRWSCISPMISSRTYFNAGNVNGKIMAVGGSVDGFGEATTEVESYDQETDTWTAVKRVPMVLAKYDSAVIGKEMCVTEGWAWPFMFPPMGHVYDSDENTWREMSGGMKEGWTGVSVVIHGRLFVISEHGDFPMKVYFSEDDTWRYVSGEKLPGEKMRRPFAVTGAGDRVFVVAGGINVAEGR-VSEGQNGEFSVEWRMVSSPQSFVHFSPASCHVLY 371
BLAST of Ca_01839 vs. TrEMBL
Match: D7LI93_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_481310 PE=4 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 4.817e-78 Identity = 163/350 (46.57%), Postives = 214/350 (61.14%), Query Frame = 1 Query: 22 TEHEELIPQLPNEIAEICLLHVPYPYHCLVRSVSSSWNRAITNPSFLLSKRSFS--RPNIFVSAFHTLTAKIQWQSLDPSTGRWFXXXXXXXXXXXXA------CVSLPRQGKIFLIKETE---STLVYNSAINRWLPASDMISENSVFAADEVSGGIVTAEKS-GTN--------IYDSESDTWRRGAKFTGELERYETVVAGGKMYVTEGWSWPFVVRPKGGVYDLESDTWREMRNGMSDGWIGVSVGVCGRVFVIPEL-DLPLRVYDEVSDTWRGVSGDLFPRDVMKKPLVAKGLDDRIYVVSHGLNVAIGTVVVNNECSTVNVTWQVVEASLSFREFSPSTCQVLY 1008
T+ + LIP LPN+IAE+CLL +PYPYH L RSVSSSWN+ ITNP FL SK+S S P +FV AF+ TAK+QWQSLD ++GRWF + C S PRQGK+F++ + S +VY + NRW S M+S + F A V+G I+ S G N YD ++DTW K L +Y++ V G KM VTEGW+WPF+ P G VYD + DTWREM +GM +GW GVSV + R+FVI E D P++VY DTWR VSG+ P D M++P G DDR++VV+ GLNVA G V + +V W++V + S +FSP++C VLY
Sbjct: 11 TKTQPLIPGLPNDIAELCLLRLPYPYHALFRSVSSSWNKTITNPRFLFSKQSLSISSPYLFVFAFNKSTAKMQWQSLDLTSGRWFVLPPMPKSFNQISSPHALSCASSPRQGKLFVLGGGDLNRSAVVYTALTNRWSCISPMMSPRTYFNAGNVNGKIMAVGGSVGGNGEATTEVESYDPDNDTWTAVKKVPMVLAKYDSAVIGKKMCVTEGWAWPFMFPPMGQVYDSDEDTWREMSSGMKEGWTGVSVVIRDRLFVISEHGDFPMKVYCSDDDTWRYVSGEKLPADKMRRPFAVTGEDDRVFVVAGGLNVAAGR-VSEGQNGEFSVQWRMVSSPKSSTQFSPASCHVLY 359
BLAST of Ca_01839 vs. TrEMBL
Match: M0UA73_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 1.663e-62 Identity = 143/346 (41.33%), Postives = 185/346 (53.47%), Query Frame = 1 Query: 25 EHEELIPQLPNEIAEICLLHVPYPYHCLVRSVSSSWNRAITNPSFLLSKR----SFSRPNIFVSAFHTLTAKIQWQSLDPSTGRWFXXXXXXXXXXXXACVSLPRQGKIFLIKETESTLVYNSAINRWLPASDMISENSVFAADEVSGGIVTAEK-----SGTNIYDSESDTWRRGAKFTGELERYETVVAGGKMYVTEGWSWPFVVRPKGGVYDLESDTWREMRNGMSDGWIGVSVGVCGRVFVIPEL-DLPLRVYDEVSDTWRGVSGDLFPRDVMKKPLVAKG----LDDRIYVVSHGLNVAIGTVV---VNNECSTVNVTWQVVEASLSFREFSPSTCQVLYA 1011
E E LIP LP+E+AE CLLH+P+PY L RSVSSSWNRA+++PSF+ SK + S P +F AF T ++QWQ+LD T RWF A P Q + L Y + N W A+ M + FAA + G I A S YD +D W A + RY+ V G +MYVTEGW+WPF P+GGVYD + D W EMR GM +GW G S V GR++V+ E D ++ YDE +D WR V+G P +V K+P G D RIYVV GL+V +GTVV + V WQVV+ +F + +P VLYA
Sbjct: 27 EMEPLIPGLPDEVAEQCLLHLPFPYQSLARSVSSSWNRALSSPSFIRSKAKAAAALSLPYLFAFAFDRSTLRLQWQALDCRTSRWFLYVLGGMR----ADTQSPLQ----------TLLAYRAGTNSWSAAAPMPTPRCFFAAGAIGGRIFAAGGDDGGISAVECYDPAADRWAPAAGMRRGMARYDAAVVGRRMYVTEGWTWPFDSSPRGGVYDADRDAWEEMRVGMREGWTGASAVVGGRLYVVSECGDGRVKAYDEETDRWRAVAGGAVPAEV-KRPYAVTGGGAAEDGRIYVVGSGLDVGVGTVVEAAAGGRGAVERVEWQVVKGPPAFADLAPCNALVLYA 357
BLAST of Ca_01839 vs. TrEMBL
Match: A5BP47_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041844 PE=4 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 1.663e-62 Identity = 130/275 (47.27%), Postives = 168/275 (61.09%), Query Frame = 1 Query: 31 EELIPQLPNEIAEICLLHVPYPYHCLVRSVSSSWNRAITNPSFLLSKR--SFSRPNIFVSAFHTLTAKIQWQSLDPSTGRWFXXXXXXXXXXXX----ACVSLPRQGKIFLIKETES-------TLVYNSAINRWLPASDMISENSVFAADEVSGGIVTAEKSGTNI---------YDSESDTWRRGAKFTGELERYETVVAGGKMYVTEGWSWPFVVRPKGGVYDLESDTWREMRNGMSDGWIGVSVGVCGRVFVIPEL-DLPLRVYDEVSDTW 786
+ELIP LP EIAE+CLLHVPYPY L RSVSSSWN+AIT+PSFLLSK+ S S+P +FV A T++IQWQ+LDP +GRWF AC SLP GK+F++ + S T++Y ++ N+W AS M + + FAA ++G I A G + YD SDTW AK L RY+ V G K+YVTEGW+WPF P+GGVYD + DTW+EM GM +GW G+SV + R+FV+ E D ++VY DTW
Sbjct: 18 DELIPGLPEEIAELCLLHVPYPYQALARSVSSSWNKAITDPSFLLSKKILSLSQPYLFVFASSKSTSRIQWQALDPRSGRWFVLPPMPCSAAACPPGLACASLPEDGKLFVLGDLRSDGTSLHTTIMYRASTNQWSLASPMRTPRTFFAAGSINGKIFAAGGRGLGVEDSIPTVERYDPVSDTWAAVAKMRSGLARYDAAVVGNKLYVTEGWTWPFSFSPRGGVYDGDRDTWQEMSLGMREGWTGISVVLRNRLFVLSEYGDCRMKVYVPDHDTW 292
BLAST of Ca_01839 vs. DB:Swiss
Match: AFR_ARATH (F-box protein AFR OS=Arabidopsis thaliana OX=3702 GN=AFR PE=1 SV=2) HSP 1 Score: 285.804 bits (730), Expect = 1.987e-93 Identity = 158/355 (44.51%), Postives = 214/355 (60.28%), Query Frame = 1 Query: 7 EKRYNTEHEELIPQLPNEIAEICLLHVPYPYHCLVRSVSSSWNRAITNPSFLLSKRSFS--RPNIFVSAFHTLTAKIQWQSLDPSTGRWF------XXXXXXXXXXXXACVSLPRQGKIFLIKETE---STLVYNSAINRWLPASDMISENSVFAADEVSGGIVTAEKS-GTN--------IYDSESDTWRRGAKFTGELERYETVVAGGKMYVTEGWSWPFVVRPKGGVYDLESDTWREMRNGMSDGWIGVSVGVCGRVFVIPEL-DLPLRVYDEVSDTWRGVSGDLFPRDVMKKPLVAKGLDDRIYVVSHGLNVAIGTVVVNNECSTVNVTWQVVEASLSFREFSPSTCQVLY 1008
E+ T+ + LI LPN+IAE+CLL +PYPYH L RSVSSSWN+ ITNP FL SK+S S P +FV AF+ TA+IQWQSLD ++GRWF L+C S+PRQGK+F++ + S +VY + NRW S M+S + F + V+G I+ S G N YD ++DTW K L +Y++ V G +M VTEGW+WPF+ P G VYD + TWREM GM +GW GVSV + R+FVI E D P++VY DTWR VSG+ + M++P G DDR++VV+ G+NVA G V + +V W++V + S +FSP++C VLY
Sbjct: 18 EEETRTKSQPLISGLPNDIAELCLLRLPYPYHALYRSVSSSWNKTITNPRFLFSKQSLSISSPYLFVFAFNKSTARIQWQSLDLASGRWFVLPPMPNSFTKISSPHALSCASMPRQGKLFVLGGGDVNRSAVVYTALTNRWSCISPMMSPRTYFVSGNVNGKIMAVGGSVGGNGEATTEVESYDPDNDTWTVVKKLPMVLAKYDSAVIGKEMCVTEGWAWPFMFPPMGQVYDSDEGTWREMSGGMKEGWTGVSVVIRDRLFVISEHGDFPMKVYCSDDDTWRYVSGEKLQGEKMRRPFAVTGADDRVFVVASGINVAEGR-VSEGQNGDFSVEWRMVSSPKSSIQFSPASCHVLY 371
BLAST of Ca_01839 vs. DB:Swiss
Match: FBK17_ARATH (F-box/kelch-repeat protein At1g30090 OS=Arabidopsis thaliana OX=3702 GN=At1g30090 PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.880e-55 Identity = 112/351 (31.91%), Postives = 177/351 (50.43%), Query Frame = 1 Query: 31 EELIPQLPNEIAEICLLHVPYPYHCLVRSVSSSWNRAITNPSFLLSKRS---FSRPNIFVSAFHTLTAKIQWQSLDPSTGRWFXXXXXXXXXXXXA----CVSLPRQGKIF----LIKETES----TLVYNSAINRWLPASDMISENSVFAADEVSGGIVTAEKSGTNIYDSE--------SDTWRRGAKFTGELERYETVVAGGKMYVTEGWSWPFVVRPKGGVYDLESDTWREMRNGMSDGWIGVSVGVCGRVFVIPELD-LPLRVYDEVSDTWRGVSGDLFPRDVMKKPLVAKGLDDRIYVVSHGLNVAIGTVVVNNECSTVNVTWQVVEASLSFREFSPSTCQVLYA 1011
E LIP LP+++A CLL VP H +SV W+ +KR F P +FV F T KIQW+ LD W +P P + VS+PR+G +F ++ +++ L Y+ N W + MI+ S FA+ + G I A + ++Y+ + WR + + Y+T V GK+ VTEGW WPF V P+G VYD +D W M G+ +GW G SV + R+F++ EL+ + ++VYD V+D+W ++G P + +P +R+YVV L++A+G + + + V W+VVE+ + + +PS Q+L+A
Sbjct: 51 EPLIPGLPDDVALNCLLRVPVQSHVSSKSVCKRWHLLFGTKETFFAKRKEFGFKDPWLFVVGFSRCTGKIQWKVLDLRNLTWHEIPAMPCRDKVCPHGFRSVSMPREGTMFVCGGMVSDSDCPLDLVLKYDMVKNHWTVTNKMITARSFFASGVIDGMIYAAGGNAADLYELDCAEVLNPLDGNWRPVSNMVAHMASYDTAVLNGKLLVTEGWLWPFFVSPRGQVYDPRTDQWETMSMGLREGWTGTSVVIYDRLFIVSELERMKMKVYDPVTDSWETINGPELPEQIC-RPFAVNCYGNRVYVVGRNLHLAVGNIWQSE--NKFAVRWEVVESPERYADITPSNSQILFA 398
BLAST of Ca_01839 vs. DB:Swiss
Match: FBK22_ARATH (F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana OX=3702 GN=At1g55270 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 5.551e-14 Identity = 68/286 (23.78%), Postives = 110/286 (38.46%), Query Frame = 1 Query: 7 EKRYNTEHEE------LIPQLPNEIAEICLLHVPYPYHCLVRSVSSSWNRAITNPSFLLSKRSFSRPNIFVSAF-HTLTAKIQWQSLDPSTGRW---------FXXXXXXXXXXXXACVSLPRQGKIFLIKETESTLVYNSAINRWLPASDMISENSVFAADEVSGGIVTA--EKSG-------TNIYDSESDTWRRGAKFTGELERYETVVAGGKMYVTEGWSWPFVVRPKGGVYDLESDTWREMRNGMSDGWIGVSVGVCGRVFVIPELD-LPLRVYDEVSDTW 786
+R N++ E L+P LP+++A CL+ VP H +R V W R + F ++ +V F KI W + DP + W + C GK L + YN+ N+W A DM+ + F ++ + A E G +YD + W A + + VV K ++ S V+ YD E ++W + +GM GW + GR++ + D LRV+DE +D+W
Sbjct: 62 HRRKNSKRERTRIQPPLLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLASGNFFYSQRKLLGMSEEWVYVFKRDRDGKISWNTFDPISQLWQPLPPVPREYSEAVGFGCAVLSGCHLYLFGGKDPLRGSMRRVIFYNARTNKWHRAPDMLRKRHFFGCCVINNCLYVAGGECEGIQRTLRSAEVYDPNKNRWSFIADMSTAMVPLIGVVYDKKWFLKGLGSHQLVM---SEAYDPEVNSWSPVSDGMVAGWRNPCTSLNGRLYGLDCRDGCKLRVFDESTDSW 344
BLAST of Ca_01839 vs. DB:Swiss
Match: FBK8_ARATH (F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana OX=3702 GN=At1g22040 PE=2 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 2.640e-7 Identity = 36/118 (30.51%), Postives = 59/118 (50.00%), Query Frame = 1 Query: 574 GKMYVTEG-WSWPFVVRPKGGVYDLESDTWREMRNGMSDGWIGVSVGVCGRVFVIPEL----------DLPLRVYDEVSDTWRGVSGDLFPRDVM--KKPLVAKGLDDRIYVVSHGLN 888
G++ V + +SWPF V G VYD E++ W EM +GM +GW G V V EL + ++VYD+ DTW+ V G++ D+ + P + G +++ ++ N
Sbjct: 294 GRLCVPQSLYSWPFFVDVGGEVYDPETNLWVEMPSGMGEGWPARQAGTKLSVVVDGELYAFDPSSSMENGKIKVYDQKEDTWKVVIGEVPVYDLTDSESPYLLAGFHGKLHFITRDPN 411 The following BLAST results are available for this feature:
BLAST of Ca_01839 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot) Total hits: 4 Position : 0 Zoom : x 1
BLAST of Ca_01839 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25 Position : 0 Zoom : x 1
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BLAST of Ca_01839 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 4 Position : 0 Zoom : x 1
Expression
Available Analyses Select an Expression Analysis Select a property to group and sort biological samples Select a property to color biological samples Hover the mouse over a column in the graph to view more information about that biological sample. You can click and drag to rearrange groups along the x-axis. You can also click and drag to move the legend. InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_01839_v1.0_kabuli ID=Ca_01839_v1.0_kabuli; Name=Ca_01839; organism=Cicer arietinum; type=mRNA; length=1014bpback to top protein sequence of Ca_01839_v1.0_kabuli >Ca_01839_v1.0_kabuli ID=Ca_01839_v1.0_kabuli; Name=Ca_01839_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=337bpback to top mRNA from alignment at Ca5:34081956..34083051- Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_01839_v1.0_kabuli ID=Ca_01839_v1.0_kabuli; Name=Ca_01839; organism=Cicer arietinum; type=mRNA; length=1096bp; location=Sequence derived from: Ca5:34081956..34083051- (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca5:34081956..34083051- >Ca_01839_v1.0_kabuli ID=Ca_01839_v1.0_kabuli; Name=Ca_01839; organism=Cicer arietinum; type=CDS; length=1014bp; location=Sequence derived from: Ca5:34081956..34083051- (Cicer arietinumback to top |