Ca_01875, Ca_01875_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_01875
Unique NameCa_01875_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length768
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca5chromosomeCa5:33818678..33821240 +Cicer arietinum CDC Frontier genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum CDC Frontier genome v1.02013-01-01
InterProScan analysis for kabuli C. arietinum unigenes2013-10-24
Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL2013-10-24
BLAST: C. arietinum CDC Frontier (kabuli), Swissprot2019-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR381Pisum sativum Cameor genome v1aPisum sativum
capsR382Pisum sativum Cameor genome v1aPisum sativum
capsR432Pisum sativum Cameor genome v1aPisum sativum
cavuR391Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR392Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR422Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR434Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR440Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR512Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0692Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0331Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0383Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0765Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0960Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL284Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL331Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL646Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL751Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR353Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR388Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR400Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR418Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR402Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR420Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR409Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR431Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR438Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR464Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR372Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR387Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR392Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR421Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR182Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR189Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL031Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL546Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL642Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL748Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR374Cicer arietinum
cacarR393Cicer arietinum
cacarR411Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
rna-XM_014645868.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_01875-CDS1Ca_01875-CDS1Cicer arietinumCDS
Ca_01875-CDS2Ca_01875-CDS2Cicer arietinumCDS
Ca_01875-CDS3Ca_01875-CDS3Cicer arietinumCDS
Ca_01875-CDS4Ca_01875-CDS4Cicer arietinumCDS
Ca_01875-CDS5Ca_01875-CDS5Cicer arietinumCDS
Ca_01875-CDS6Ca_01875-CDS6Cicer arietinumCDS
Ca_01875-CDS7Ca_01875-CDS7Cicer arietinumCDS
Ca_01875-CDS8Ca_01875-CDS8Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_01875_v1.0_kabuliCa_01875_v1.0_kabuliCicer arietinumpolypeptide


Homology
BLAST of Ca_01875 vs. TrEMBL
Match: G7J2X9_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_3g109470 PE=4 SV=1)

HSP 1 Score: 333.954 bits (855), Expect = 2.822e-89
Identity = 163/190 (85.79%), Postives = 173/190 (91.05%), Query Frame = 1
Query:  199 IDRSKWFKPMPWEERMRNAHEQGKLVLLENLDPSLTSSEVQDIIWLGFKESCTVMVIQKTAESSPHSGQAFVIFKRKEAAESVIRKLEEGCFLMSNGRPLVGSFG-LPCFPEKKPIFYGHHVNDHLRLQTQREMKDAVSTSHCSQPNNIEYDMAVEWCLLQERADKSWRRLYQRQGEELRKLKAKLNVKI 765
            +DRSKWFKPMPWEERM++A+EQG+LVLLENLDPSLTSSEVQDII  GFKE CT  +IQKTA SSP+SGQAF IFKRKEAAESVIR LEEGCFLMSNGRPLVGSFG LPC PEKKP FYGHHV D LRLQTQREMKDA+STSHCSQPNNIEYDMAVEWCLLQERADKSWR+LYQRQG EL KLKAKL  K+
Sbjct:  483 VDRSKWFKPMPWEERMKDAYEQGRLVLLENLDPSLTSSEVQDIILDGFKERCTAKLIQKTAYSSPNSGQAFAIFKRKEAAESVIRNLEEGCFLMSNGRPLVGSFGRLPCIPEKKPTFYGHHVIDQLRLQTQREMKDAISTSHCSQPNNIEYDMAVEWCLLQERADKSWRKLYQRQGGELSKLKAKLKSKL 672          
BLAST of Ca_01875 vs. TrEMBL
Match: I1K982_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2)

HSP 1 Score: 316.62 bits (810), Expect = 4.662e-84
Identity = 150/189 (79.37%), Postives = 169/189 (89.42%), Query Frame = 1
Query:  202 DRSKWFKPMPWEERMRNAHEQGKLVLLENLDPSLTSSEVQDIIWLGFKESCTVMVIQKTAESSPHSGQAFVIFKRKEAAESVIRKLEEGCFLMSNGRPLVGSFGLPCFPEKKPIFYGHHVNDHLR-LQTQREMKDAVSTSHCSQPNNIEYDMAVEWCLLQERADKSWRRLYQRQGEELRKLKAKLNVKI 765
            DRSKWFK +PWEE+M+ A+EQG+LVLL+NLDPSL+SSEVQ+IIW GFKESCT  +IQKTA SSPHSGQAFVIFK+ EAAESV+RKL+EGC LMSNGRPLV S G+PCFP+KKPIFYGHHV D LR +Q QRE+KD VSTSHCSQPNNIEYDM +EWCLLQERA+KSWR LYQ+QGEEL KLKAKL  KI
Sbjct:  468 DRSKWFKEIPWEEKMKTAYEQGRLVLLQNLDPSLSSSEVQNIIWTGFKESCTARMIQKTAYSSPHSGQAFVIFKKSEAAESVVRKLDEGCLLMSNGRPLVASSGVPCFPKKKPIFYGHHVVDQLRMMQMQREIKDVVSTSHCSQPNNIEYDMGIEWCLLQERANKSWRMLYQQQGEELSKLKAKLKSKI 656          
BLAST of Ca_01875 vs. TrEMBL
Match: K7KTT4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 1.658e-81
Identity = 148/189 (78.31%), Postives = 167/189 (88.36%), Query Frame = 1
Query:  202 DRSKWFKPMPWEERMRNAHEQGKLVLLENLDPSLTSSEVQDIIWLGFKESCTVMVIQKTAESSPHSGQAFVIFKRKEAAESVIRKLEEGCFLMSNGRPLVGSFGLPCFPEKKPIFYGHHVNDHLR-LQTQREMKDAVSTSHCSQPNNIEYDMAVEWCLLQERADKSWRRLYQRQGEELRKLKAKLNVKI 765
            DRSKWFK +PWEE+M+ A+EQG+LVLL+NLDPSL+SSE  +IIW GFKESCT  +IQKTA SSPHSGQAFVIFK+ EAAESV+RKL+EGC LMSNGRPLV S G+PCFP+KKPIFYGHHV D LR +Q QRE+KD VSTSHCSQPNNIEYDM +EWCLLQERA+KSWR LYQ+QGEEL KLKAKL  KI
Sbjct:  468 DRSKWFKEIPWEEKMKTAYEQGRLVLLQNLDPSLSSSE--NIIWTGFKESCTARMIQKTAYSSPHSGQAFVIFKKSEAAESVVRKLDEGCLLMSNGRPLVASSGVPCFPKKKPIFYGHHVVDQLRMMQMQREIKDVVSTSHCSQPNNIEYDMGIEWCLLQERANKSWRMLYQQQGEELSKLKAKLKSKI 654          
BLAST of Ca_01875 vs. TrEMBL
Match: F6H3F4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g04190 PE=4 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 1.662e-73
Identity = 130/187 (69.52%), Postives = 156/187 (83.42%), Query Frame = 1
Query:  202 DRSKWFKPMPWEERMRNAHEQGKLVLLENLDPSLTSSEVQDIIWLGFKESCTVMVIQKTAESSPHSGQAFVIFKRKEAAESVIRKLEEGCFLMSNGRPLVGSFGLPCFPEKKPIFYGHHVNDHLRLQTQREMKDAVSTSHCSQPNNIEYDMAVEWCLLQERADKSWRRLYQRQGEELRKLKAKLNVK 762
            DRS+WF+ +PWEERM+ AH+QG LVLL+NLDP+ TS+EV+DI+W GFKESCT  +IQ TA SSPHSGQAFVIFK ++AA S IRKLEEGC L+SNGRPLVGSFG PCFP K+  F GH   D +++Q QREMK AVSTSHCSQPN IEY+MA++WCL QER+D  W++LY+RQG+ELRKLKA L  K
Sbjct:  435 DRSRWFRGLPWEERMQTAHQQGTLVLLQNLDPAYTSAEVEDIVWHGFKESCTARMIQHTAISSPHSGQAFVIFKTRDAAVSAIRKLEEGCLLLSNGRPLVGSFGTPCFPGKQSTFVGHLSIDKVKVQMQREMKQAVSTSHCSQPNTIEYEMAMDWCLQQERSDSCWKKLYKRQGDELRKLKASLKSK 621          
BLAST of Ca_01875 vs. TrEMBL
Match: M5XUE2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015277mg PE=4 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 1.410e-64
Identity = 122/180 (67.78%), Postives = 147/180 (81.67%), Query Frame = 1
Query:  229 PWEERMRNAHEQGKLVLLENLDPSLTSSEVQDIIWLGFKESCTVMVIQKTAESSPHSGQAFVIFKRKEAAESVIRKLEEGCFLMSNGRPLVGSFGLPCFPEKKPIFYGHHVNDHLRLQ--TQREMKDAVSTSHCSQPNNIEYDMAVEWCLLQERADKSWRRLYQRQGEELRKLKAKLNVK 762
            PWE+RM+ AHEQG LVLL+NLDP+ TS+EV+DI+W GFKE+CT  +IQ+ + SSPHSGQA VIFK +EAA+ V+RKL+EGC L+SNGRPLVGS G     EKKPIF+GH V D LR Q   +REMK+AVSTSHCSQPN  EYDMA+EWCLLQER+D  W  LY++QG+ELRKLKA+L  K
Sbjct:  497 PWEDRMQTAHEQGTLVLLQNLDPAFTSAEVEDIVWHGFKETCTAKMIQRISNSSPHSGQALVIFKTREAAQMVVRKLDEGCLLLSNGRPLVGSIGTHS-AEKKPIFFGHLVIDKLRHQMLREREMKEAVSTSHCSQPNTTEYDMAMEWCLLQERSDLVWGNLYKQQGKELRKLKAELKAK 675          
BLAST of Ca_01875 vs. TrEMBL
Match: B9IKP1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_578120 PE=4 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 4.536e-63
Identity = 114/178 (64.04%), Postives = 143/178 (80.34%), Query Frame = 1
Query:  229 PWEERMRNAHEQGKLVLLENLDPSLTSSEVQDIIWLGFKESCTVMVIQKTAESSPHSGQAFVIFKRKEAAESVIRKLEEGCFLMSNGRPLVGSFGLPCFPEKKPIFYGHHVNDHLRLQTQREMKDAVSTSHCSQPNNIEYDMAVEWCLLQERADKSWRRLYQRQGEELRKLKAKLNVK 762
            PWEE M+ AHEQG LVLL+NLDPS TS+EV+D+IW  FK+SCT  +IQ+TA SSPHSGQAFVIF+++E AE  + KL+E C ++SNGRPLVGS   PCFP K+  F+GH   + LR+  QREMK+AVSTSHCSQPN +EYDMA+EWCLLQ+R+D + R+L Q+Q +ELRKL+A L  K
Sbjct:  365 PWEETMQTAHEQGTLVLLQNLDPSYTSAEVEDLIWQAFKQSCTAKMIQRTARSSPHSGQAFVIFQKREVAEMAVAKLDEVCLMLSNGRPLVGSIAAPCFPGKQSTFFGHLTINKLRIHMQREMKEAVSTSHCSQPNTLEYDMAMEWCLLQDRSDLALRKLRQQQEQELRKLRATLKSK 542          
BLAST of Ca_01875 vs. TrEMBL
Match: A5AUS7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042543 PE=4 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 7.737e-63
Identity = 113/165 (68.48%), Postives = 136/165 (82.42%), Query Frame = 1
Query:  220 KPMPWEERMRNAHEQGKLVLLENLDPSLTSSEVQDIIWLGFKESCTVMVIQKTAESSPHSGQAFVIFKRKEAAESVIRKLEEGCFLMSNGRPLVGSFGLPCFPEKKPIFYGHHVNDHLRLQTQREMKDAVSTSHCSQPNNIEYDMAVEWCLLQERADKSWRRLYQ 714
            K  PWEERM+ AH+QG LVLL+NLDP+ TS+EV+DI+W GFKESCT  +IQ+T  SSPHSGQAFVIFK ++AA S IRKLEEGC L+SNGRPLVGSFG PCFP K+  F GH   D +++Q QREMK AVSTSHCSQPN IEY+MA++WCL QER+D  W++LY+
Sbjct:  203 KGKPWEERMQTAHQQGTLVLLQNLDPAYTSAEVEDIVWHGFKESCTARMIQRTTISSPHSGQAFVIFKTRDAAVSAIRKLEEGCLLLSNGRPLVGSFGTPCFPGKQSTFVGHLSIDKVKVQMQREMKQAVSTSHCSQPNTIEYEMAMDWCLQQERSDSCWKKLYK 367          
BLAST of Ca_01875 vs. TrEMBL
Match: B9RS64_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0803370 PE=4 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 1.510e-58
Identity = 107/184 (58.15%), Postives = 137/184 (74.46%), Query Frame = 1
Query:  202 DRSKWFKPMPWEERMRNAHEQGKLVLLENLDPSLTSSEVQDIIWLGFKESCTVMVIQKTAESSPHSGQAFVIFKRKEAAESVIRKLEEGCFLMSNGRPLVGSFGLPCFPEKKPIFYGHHVNDHLRLQTQREMKDAVSTSHCSQPNNIEYDMAVEWCLLQERADKSWRRLYQRQGEELRKLKAKL 753
            D+ KWFK +PWEER++ AH +G++VLL+NLDPS T  EV+DI+W   K+SCT  +I  TA SSPHSGQAF IFK +EAAE+ + KL+EGC + S GRPLVGS     FP K   ++GH   D  R Q QR M++AVSTSHCSQPN IEYDMA+EWC LQE+ ++ W  LY++ G+ELRKL++ L
Sbjct:  542 DKIKWFKGLPWEERIKAAHAEGRIVLLQNLDPSFTGLEVEDIVWHALKQSCTAKMIPCTAFSSPHSGQAFAIFKTREAAETAVTKLDEGCLMTSYGRPLVGSIAKLSFPGKPSTYFGHMSIDKTRHQMQRVMREAVSTSHCSQPNTIEYDMALEWCFLQEQTNQEWELLYKQHGKELRKLESTL 725          
BLAST of Ca_01875 vs. TrEMBL
Match: K4D685_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc11g012810.1 PE=4 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 5.202e-51
Identity = 103/188 (54.79%), Postives = 135/188 (71.81%), Query Frame = 1
Query:  202 DRSKWFKPMPWEERMRNAHEQGKLVLLENLDPSLTSSEVQDIIWLGFKESCTVMVIQKTAESSPHSGQAFVIFKRKEAAESVIRKLEEGCFLMSNGRPLVGSF-GLPCFPEKKPIFYGHHVNDHLRLQTQREMKDAVSTSHCSQPNNIEYDMAVEWCLLQERADKSWRRLYQRQGEELRKLKAKLNVK 762
            + SKWF+  PWEE ++ ++ +  L+LLENL+P  TS EV+DIIW   +E+CT  ++Q+TA SSP+SG+A V FK +EAA  V +KL EGC ++SN RPLV SF  LP      P F GH   D LRLQ+QREMK+AVSTSHCSQPN IE++M  EW LLQ R+D  W RLY++Q +ELRK+ ++L  K
Sbjct:  402 ESSKWFEAPPWEEVLQTSNLERALILLENLNPEYTSGEVEDIIWHACRENCTAKMVQRTAFSSPYSGRALVAFKTREAAVRVSKKLTEGCLMVSNQRPLVASFVTLPKTEGNTPSFAGHLCVDKLRLQSQREMKEAVSTSHCSQPNTIEHEMGFEWRLLQSRSDSWWNRLYKQQKDELRKIASELKRK 589          
BLAST of Ca_01875 vs. TrEMBL
Match: M0T7S9_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.566e-47
Identity = 97/188 (51.60%), Postives = 133/188 (70.74%), Query Frame = 1
Query:  199 IDRSKWFKPMPWEERMRNAHEQGKLVLLENLDPSLTSSEVQDIIWLGFKESCTVMVIQKTAESSPHSGQAFVIFKRKEAAESVIRKLEEGCFLMSNGRPLVGSFGLPCFPEKKPIFYGHHVNDHLRLQTQREMKDAVSTSHCSQPNNIEYDMAVEWCLLQERADKSWRRLYQRQGEELRKLKAKLNVK 762
            +DRSKWFK +PWEERM+ A EQG LV +ENLDP  TSSEV+DII+   K+SCT  VIQ+T   +P+ GQA+VIFK ++AA+S + K+ +GC  + NG PL+ S G+   P  K   +GH   D  +LQ  REM+ AVSTSHCSQPN IEY+MA++W ++QER+ +    L++ Q +EL+ +K +L  K
Sbjct:   23 VDRSKWFKGLPWEERMQKADEQGTLVFIENLDPLFTSSEVEDIIYHTLKQSCTARVIQQTLFQNPNYGQAYVIFKTRDAADSAVSKINKGCIQLPNGSPLICSKGMLKVP--KSSMFGHLSVDKNKLQ-MREMRRAVSTSHCSQPNTIEYEMAMDWLVIQERSVRCLNALHKGQADELKAIKKRLRTK 207          
BLAST of Ca_01875 vs. DB:Swiss
Match: ASI1_ARATH (Protein ANTI-SILENCING 1 OS=Arabidopsis thaliana OX=3702 GN=ASI1 PE=4 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 1.076e-59
Identity = 99/226 (43.81%), Postives = 145/226 (64.16%), Query Frame = 1
Query:   88 MSARGATFHLKKSGLCRLGDCGRKTXXXXXXXXXXXXIDRSKWFKPMPWEERMRNAHEQGKLVLLENLDPSLTSSEVQDIIWLGFKESCTVMVIQKTAESSPHSGQAFVIFKRKEAAESVIRKLEEGCFLMSNGRPLVGSFGLPCFPEKKPIFYGHHVNDHLRLQTQREMKDAVSTSHCSQPNNIEYDMAVEWCLLQERADKSWRRLYQRQGEELRKLKAKLNVKI 765
            MSA     + + + +CR  D G+                 SKWF+ +PWEE MR A ++G +VLL+NLDP+ TS EV+DI++    + C   +I++T+ + PH G+A VIFK +E AE VIR+L+EGC L+S+GRPLV SF     P  KP  +  H+  H + QT+REM+DAV+TSH SQPNN+E+DMA+EWCL Q R +++   + +RQ EE++ L+    +K+
Sbjct:  443 MSADDNERNYQVTEVCRRPDAGK-----------------SKWFRSLPWEESMREAEKKGTVVLLQNLDPTYTSDEVEDIVYSALNQQCEARMIERTSVTIPHIGEALVIFKTREVAERVIRRLDEGCLLLSSGRPLVASFA-KITPPGKPSLFSGHIKLH-KTQTRREMRDAVATSHSSQPNNLEFDMAMEWCLHQARHEQASESVSKRQLEEMKSLRINFKLKL 649          
The following BLAST results are available for this feature:
BLAST of Ca_01875 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7J2X9_MEDTR2.822e-8985.79Putative uncharacterized protein OS=Medicago trunc... [more]
I1K982_SOYBN4.662e-8479.37Uncharacterized protein OS=Glycine max PE=4 SV=2[more]
K7KTT4_SOYBN1.658e-8178.31Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
F6H3F4_VITVI1.662e-7369.52Putative uncharacterized protein OS=Vitis vinifera... [more]
M5XUE2_PRUPE1.410e-6467.78Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
B9IKP1_POPTR4.536e-6364.04Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A5AUS7_VITVI7.737e-6368.48Putative uncharacterized protein OS=Vitis vinifera... [more]
B9RS64_RICCO1.510e-5858.15Putative uncharacterized protein OS=Ricinus commun... [more]
K4D685_SOLLC5.202e-5154.79Uncharacterized protein OS=Solanum lycopersicum GN... [more]
M0T7S9_MUSAM1.566e-4751.60Uncharacterized protein OS=Musa acuminata subsp. m... [more]

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BLAST of Ca_01875 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
ASI1_ARATH1.076e-5943.81Protein ANTI-SILENCING 1 OS=Arabidopsis thaliana O... [more]
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InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 90..173
score: 9
IPR012677Nucleotide-binding, alpha-beta plaitGENE3D3.30.70.330no descriptioncoord: 86..158
score: 9.8
NoneNo IPR availableSEGsegsegcoord: 55..66
score
NoneNo IPR availableSEGsegsegcoord: 7..26
score
NoneNo IPR availableSEGsegsegcoord: 34..48
score: NAcoord: 61..77
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_01875_v1.0_kabuli ID=Ca_01875_v1.0_kabuli; Name=Ca_01875; organism=Cicer arietinum; type=mRNA; length=768bp
ATGGTTGTTTCGGAAAATTTGCTGGAAAACTTTTTCAGCAGCGACAGTAG
AAGGAAGGCAGCAGTAGACGACGGATCTTGGAGGCACATGAGCGCGCGTG
GAGCAACTTTTCACCTAAAAAAATCTGGATTGTGTAGATTGGGAGATTGT
GGGCGGAAGACGGCGGCGGCAGCAGTAGCAGACAGGGCTGCAGCGGCGAT
TGATAGAAGCAAATGGTTTAAACCAATGCCTTGGGAGGAAAGAATGAGAA
ATGCCCATGAACAAGGAAAACTTGTGCTGCTTGAAAATTTGGATCCTTCT
TTAACTTCATCAGAAGTACAGGATATTATTTGGCTTGGCTTTAAAGAAAG
TTGTACTGTGATGGTGATCCAGAAAACTGCAGAATCTAGTCCTCATTCTG
GTCAAGCTTTTGTTATATTTAAAAGAAAGGAAGCGGCAGAGTCTGTTATT
AGAAAATTAGAGGAGGGCTGTTTCTTGATGTCAAATGGGCGCCCACTTGT
GGGAAGCTTTGGACTTCCTTGCTTTCCGGAAAAGAAGCCAATATTTTATG
GTCATCATGTTAATGATCATCTTCGATTGCAAACACAACGTGAGATGAAA
GATGCTGTATCTACTTCACATTGTTCTCAGCCAAACAACATTGAGTACGA
TATGGCCGTAGAGTGGTGTTTACTCCAAGAAAGAGCAGACAAATCTTGGA
GAAGACTGTATCAGCGACAAGGCGAGGAGTTGAGAAAACTCAAAGCTAAG
TTGAATGTTAAAATCTAA
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protein sequence of Ca_01875_v1.0_kabuli

>Ca_01875_v1.0_kabuli ID=Ca_01875_v1.0_kabuli; Name=Ca_01875_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=255bp
MVVSENLLENFFSSDSRRKAAVDDGSWRHMSARGATFHLKKSGLCRLGDC
GRKTAAAAVADRAAAAIDRSKWFKPMPWEERMRNAHEQGKLVLLENLDPS
LTSSEVQDIIWLGFKESCTVMVIQKTAESSPHSGQAFVIFKRKEAAESVI
RKLEEGCFLMSNGRPLVGSFGLPCFPEKKPIFYGHHVNDHLRLQTQREMK
DAVSTSHCSQPNNIEYDMAVEWCLLQERADKSWRRLYQRQGEELRKLKAK
LNVKI
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mRNA from alignment at Ca5:33818678..33821240+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_01875_v1.0_kabuli ID=Ca_01875_v1.0_kabuli; Name=Ca_01875; organism=Cicer arietinum; type=mRNA; length=2563bp; location=Sequence derived from: Ca5:33818678..33821240+ (Cicer arietinum
ATGGTTGTTTCGGAAAATTTGCTGGAAAACTTTTTCAGCAGCGACAGTAG AAGGAAGGCAGCAGTAGACGACGGATCTTGGAGGCACATGAGCGCGCGTG GAGCAACTTTTCACCTAAAAAAATCTGGATTGTGTAGATTGGGAGATTGT GGGCGGAAGACGGCGGCGGCAGCAGTAGCAGACAGGGCTGCAGCGGCGAT TGTGGGCGGAAGTGACAACAGTCACATAAAGGAGTGATCATGCTAGAAAA GAGAAATTATGATTATATTCCCTAACTGTTGGGAACTTGGCAGCGGAATA GAGGTCGTTCAAGGAGGATCGCAATAGGCTCTGATACCATGTTGAAGTTG TGGGATTTTAGAGAAAAGGAGAAGAGAAAATAATAAGGGTTTGAATACTA TTGATAATAACTTTATGCTAATTTGATTACAAAAGACTCAATAGTAATCT CTATTTATAGAAAAACATAGACTCAATCCTAAAGCAGGTGTAAATCATAA TAATAATGAGAGATATTCTAAGATATCTCTATGATTATAAATTGATCCTA GGGAATAATTCAAGATACTCTAATATAATATAATAGATATTATAAGATAT TTTCTAATATTCTAACAGATTGAAAGTAGTTGTATAATTTTATAGTTTCA TATTGCTGCTGACTATGGCATATATTAATAAGGAATCCTCTTATAAACTT TCTAAAGAAACAATTAGATTTTAGTAAATCAATGTACTTATTTTTGTCAA TTTTCAATTGTTTAGTTGCTGTGATGCATGTTGATTCTTAACATCGATTG TTTAGTTTTCTTATGCATGTTTTTTTACTTGGTGACAGGATAGAAGCAAA TGGTTTAAACCAATGGTAAGTTTTCCTTTTCATTCAATTCTCTTTAACAT CTTTATTTAATCTACTCTTGTGGGGTTTAATGAACTACTTACATACAACC TTGAAGTCGCCTTTTTATCGGACGATGCAAATGAATGAGATTAAGTGAAA CAAGGGTGACTTATGTAATCTTGTATCATTTTCAGCCTTGGGAGGAAAGA ATGAGAAATGCCCATGAACAAGGAAAACTTGTGCTGCTTGAAAATTTGGA TCCTTCTTTAACTTCATCAGAAGTACAGGTAATAATCATCCCAAAACCAA CATTTTCAGATTCTTGCAGATTAAGGGGAAAATTAGAATACAAAACCAAC ATTTTCAGATTCTGGCAGATTAAGGGGAAAATTAGAATACAAAACCAAGA TTCTTTAAAAGGACTGCATCATTCCTTCTTATTTGTTGAATCCTGTGTAG AGTGGTTAATTTGCAGCCTAAATAGCCCGGTTAAATATTCCTTCTTATTT GTTGTAGTTGTGTTTTATTTGGAATAAAAGATGTTGTATTTGCATTTGTA CCATTTATTTGTGGGGTGATTTACATTTTTTTTATATATAGAATTAAGTA GTTTTATTAGATTGTTGTTTTTACAATATGCTGACTTAATGTGTCATCCG GTTTGTTTTATCTAAATAAGCTGCCTATCTCTAATATGTTTGACTTGCTG TTCTAAATCACAGGATATTATTTGGCTTGGCTTTAAAGAAAGTTGTACTG TGATGGTGATCCAGAAAACTGCAGAATCTAGTCCTCATTCTGGTTAGAAA CTACATTCTTTGTTCATCTTTTTCTACAAGCTAGCTAAGATTGCATGCAC TTTCCCCTCCCTCCTGGGATCGTGGACTTGGATATGTGTTCAGGCTAATA TTTTTTCCAAGCACCTCATATACAACTGACAGTGTTTCAATATGTTTATT TATGATATAGGTCAAGCTTTTGTTATATTTAAAAGAAAGGAAGCGGCAGA GTCTGTTATTAGAAAATTAGAGGAGGGCTGTTTCTTGATGTCAAATGGGC GGTATGAACTCAGCTGCATAAGCTTGATAACTGCAATGGCAAATAGCTTT AATCCTTCGATAATGTCATAATCATATACCATTTATGCTAAAGTTTACCA TGTTAATGCTTACCGCTTATATGGTTGTAAATTTTCTTGCTATTGTTTGC TCTTATGTATTGCTTACTCGGATTATTTAATTTTATTACTTGGTAGCCCA CTTGTGGGAAGCTTTGGACTTCCTTGCTTTCCGGAAAAGAAGCCAATATT TTATGGTCATCATGTTAATGATCATCTTCGATTGCAAACACAACGTGAGA TGGTATGGTCTGATTTATTTTTTATTAATTTTCCTGGCCTAATTTTTGAA GTATTTATCAAACAGTAGGTTCATTTTATTTGATTGTCGATCTGATGTTG GTTGTACAGAAAGATGCTGTATCTACTTCACATTGTTCTCAGCCAAACAA CATTGAGTACGATATGGCCGTAGAGTGGTGTTTACTCCAAGAAAGAGCAG ACAAATCTTGGAGAAGACTGTATCAGGTATTAGAATATTTGAATTGTGTT GGAAATAATTGAGTTCTGCTTTATTTAACCACATTGATATTTGGTTTTAA TTTTTCAAGCGACAAGGCGAGGAGTTGAGAAAACTCAAAGCTAAGTTGAA TGTTAAAATCTAA
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Coding sequence (CDS) from alignment at Ca5:33818678..33821240+

>Ca_01875_v1.0_kabuli ID=Ca_01875_v1.0_kabuli; Name=Ca_01875; organism=Cicer arietinum; type=CDS; length=768bp; location=Sequence derived from: Ca5:33818678..33821240+ (Cicer arietinum
ATGGTTGTTTCGGAAAATTTGCTGGAAAACTTTTTCAGCAGCGACAGTAG
AAGGAAGGCAGCAGTAGACGACGGATCTTGGAGGCACATGAGCGCGCGTG
GAGCAACTTTTCACCTAAAAAAATCTGGATTGTGTAGATTGGGAGATTGT
GGGCGGAAGACGGCGGCGGCAGCAGTAGCAGACAGGGCTGCAGCGGCGAT
TGATAGAAGCAAATGGTTTAAACCAATGCCTTGGGAGGAAAGAATGAGAA
ATGCCCATGAACAAGGAAAACTTGTGCTGCTTGAAAATTTGGATCCTTCT
TTAACTTCATCAGAAGTACAGGATATTATTTGGCTTGGCTTTAAAGAAAG
TTGTACTGTGATGGTGATCCAGAAAACTGCAGAATCTAGTCCTCATTCTG
GTCAAGCTTTTGTTATATTTAAAAGAAAGGAAGCGGCAGAGTCTGTTATT
AGAAAATTAGAGGAGGGCTGTTTCTTGATGTCAAATGGGCGCCCACTTGT
GGGAAGCTTTGGACTTCCTTGCTTTCCGGAAAAGAAGCCAATATTTTATG
GTCATCATGTTAATGATCATCTTCGATTGCAAACACAACGTGAGATGAAA
GATGCTGTATCTACTTCACATTGTTCTCAGCCAAACAACATTGAGTACGA
TATGGCCGTAGAGTGGTGTTTACTCCAAGAAAGAGCAGACAAATCTTGGA
GAAGACTGTATCAGCGACAAGGCGAGGAGTTGAGAAAACTCAAAGCTAAG
TTGAATGTTAAAATCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding