Ca_01875, Ca_01875_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_01875 vs. TrEMBL
Match: G7J2X9_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_3g109470 PE=4 SV=1) HSP 1 Score: 333.954 bits (855), Expect = 2.822e-89 Identity = 163/190 (85.79%), Postives = 173/190 (91.05%), Query Frame = 1 Query: 199 IDRSKWFKPMPWEERMRNAHEQGKLVLLENLDPSLTSSEVQDIIWLGFKESCTVMVIQKTAESSPHSGQAFVIFKRKEAAESVIRKLEEGCFLMSNGRPLVGSFG-LPCFPEKKPIFYGHHVNDHLRLQTQREMKDAVSTSHCSQPNNIEYDMAVEWCLLQERADKSWRRLYQRQGEELRKLKAKLNVKI 765 +DRSKWFKPMPWEERM++A+EQG+LVLLENLDPSLTSSEVQDII GFKE CT +IQKTA SSP+SGQAF IFKRKEAAESVIR LEEGCFLMSNGRPLVGSFG LPC PEKKP FYGHHV D LRLQTQREMKDA+STSHCSQPNNIEYDMAVEWCLLQERADKSWR+LYQRQG EL KLKAKL K+ Sbjct: 483 VDRSKWFKPMPWEERMKDAYEQGRLVLLENLDPSLTSSEVQDIILDGFKERCTAKLIQKTAYSSPNSGQAFAIFKRKEAAESVIRNLEEGCFLMSNGRPLVGSFGRLPCIPEKKPTFYGHHVIDQLRLQTQREMKDAISTSHCSQPNNIEYDMAVEWCLLQERADKSWRKLYQRQGGELSKLKAKLKSKL 672
BLAST of Ca_01875 vs. TrEMBL
Match: I1K982_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 316.62 bits (810), Expect = 4.662e-84 Identity = 150/189 (79.37%), Postives = 169/189 (89.42%), Query Frame = 1 Query: 202 DRSKWFKPMPWEERMRNAHEQGKLVLLENLDPSLTSSEVQDIIWLGFKESCTVMVIQKTAESSPHSGQAFVIFKRKEAAESVIRKLEEGCFLMSNGRPLVGSFGLPCFPEKKPIFYGHHVNDHLR-LQTQREMKDAVSTSHCSQPNNIEYDMAVEWCLLQERADKSWRRLYQRQGEELRKLKAKLNVKI 765 DRSKWFK +PWEE+M+ A+EQG+LVLL+NLDPSL+SSEVQ+IIW GFKESCT +IQKTA SSPHSGQAFVIFK+ EAAESV+RKL+EGC LMSNGRPLV S G+PCFP+KKPIFYGHHV D LR +Q QRE+KD VSTSHCSQPNNIEYDM +EWCLLQERA+KSWR LYQ+QGEEL KLKAKL KI Sbjct: 468 DRSKWFKEIPWEEKMKTAYEQGRLVLLQNLDPSLSSSEVQNIIWTGFKESCTARMIQKTAYSSPHSGQAFVIFKKSEAAESVVRKLDEGCLLMSNGRPLVASSGVPCFPKKKPIFYGHHVVDQLRMMQMQREIKDVVSTSHCSQPNNIEYDMGIEWCLLQERANKSWRMLYQQQGEELSKLKAKLKSKI 656
BLAST of Ca_01875 vs. TrEMBL
Match: K7KTT4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 308.145 bits (788), Expect = 1.658e-81 Identity = 148/189 (78.31%), Postives = 167/189 (88.36%), Query Frame = 1 Query: 202 DRSKWFKPMPWEERMRNAHEQGKLVLLENLDPSLTSSEVQDIIWLGFKESCTVMVIQKTAESSPHSGQAFVIFKRKEAAESVIRKLEEGCFLMSNGRPLVGSFGLPCFPEKKPIFYGHHVNDHLR-LQTQREMKDAVSTSHCSQPNNIEYDMAVEWCLLQERADKSWRRLYQRQGEELRKLKAKLNVKI 765 DRSKWFK +PWEE+M+ A+EQG+LVLL+NLDPSL+SSE +IIW GFKESCT +IQKTA SSPHSGQAFVIFK+ EAAESV+RKL+EGC LMSNGRPLV S G+PCFP+KKPIFYGHHV D LR +Q QRE+KD VSTSHCSQPNNIEYDM +EWCLLQERA+KSWR LYQ+QGEEL KLKAKL KI Sbjct: 468 DRSKWFKEIPWEEKMKTAYEQGRLVLLQNLDPSLSSSE--NIIWTGFKESCTARMIQKTAYSSPHSGQAFVIFKKSEAAESVVRKLDEGCLLMSNGRPLVASSGVPCFPKKKPIFYGHHVVDQLRMMQMQREIKDVVSTSHCSQPNNIEYDMGIEWCLLQERANKSWRMLYQQQGEELSKLKAKLKSKI 654
BLAST of Ca_01875 vs. TrEMBL
Match: F6H3F4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g04190 PE=4 SV=1) HSP 1 Score: 281.567 bits (719), Expect = 1.662e-73 Identity = 130/187 (69.52%), Postives = 156/187 (83.42%), Query Frame = 1 Query: 202 DRSKWFKPMPWEERMRNAHEQGKLVLLENLDPSLTSSEVQDIIWLGFKESCTVMVIQKTAESSPHSGQAFVIFKRKEAAESVIRKLEEGCFLMSNGRPLVGSFGLPCFPEKKPIFYGHHVNDHLRLQTQREMKDAVSTSHCSQPNNIEYDMAVEWCLLQERADKSWRRLYQRQGEELRKLKAKLNVK 762 DRS+WF+ +PWEERM+ AH+QG LVLL+NLDP+ TS+EV+DI+W GFKESCT +IQ TA SSPHSGQAFVIFK ++AA S IRKLEEGC L+SNGRPLVGSFG PCFP K+ F GH D +++Q QREMK AVSTSHCSQPN IEY+MA++WCL QER+D W++LY+RQG+ELRKLKA L K Sbjct: 435 DRSRWFRGLPWEERMQTAHQQGTLVLLQNLDPAYTSAEVEDIVWHGFKESCTARMIQHTAISSPHSGQAFVIFKTRDAAVSAIRKLEEGCLLLSNGRPLVGSFGTPCFPGKQSTFVGHLSIDKVKVQMQREMKQAVSTSHCSQPNTIEYEMAMDWCLQQERSDSCWKKLYKRQGDELRKLKASLKSK 621
BLAST of Ca_01875 vs. TrEMBL
Match: M5XUE2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015277mg PE=4 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 1.410e-64 Identity = 122/180 (67.78%), Postives = 147/180 (81.67%), Query Frame = 1 Query: 229 PWEERMRNAHEQGKLVLLENLDPSLTSSEVQDIIWLGFKESCTVMVIQKTAESSPHSGQAFVIFKRKEAAESVIRKLEEGCFLMSNGRPLVGSFGLPCFPEKKPIFYGHHVNDHLRLQ--TQREMKDAVSTSHCSQPNNIEYDMAVEWCLLQERADKSWRRLYQRQGEELRKLKAKLNVK 762 PWE+RM+ AHEQG LVLL+NLDP+ TS+EV+DI+W GFKE+CT +IQ+ + SSPHSGQA VIFK +EAA+ V+RKL+EGC L+SNGRPLVGS G EKKPIF+GH V D LR Q +REMK+AVSTSHCSQPN EYDMA+EWCLLQER+D W LY++QG+ELRKLKA+L K Sbjct: 497 PWEDRMQTAHEQGTLVLLQNLDPAFTSAEVEDIVWHGFKETCTAKMIQRISNSSPHSGQALVIFKTREAAQMVVRKLDEGCLLLSNGRPLVGSIGTHS-AEKKPIFFGHLVIDKLRHQMLREREMKEAVSTSHCSQPNTTEYDMAMEWCLLQERSDLVWGNLYKQQGKELRKLKAELKAK 675
BLAST of Ca_01875 vs. TrEMBL
Match: B9IKP1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_578120 PE=4 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 4.536e-63 Identity = 114/178 (64.04%), Postives = 143/178 (80.34%), Query Frame = 1 Query: 229 PWEERMRNAHEQGKLVLLENLDPSLTSSEVQDIIWLGFKESCTVMVIQKTAESSPHSGQAFVIFKRKEAAESVIRKLEEGCFLMSNGRPLVGSFGLPCFPEKKPIFYGHHVNDHLRLQTQREMKDAVSTSHCSQPNNIEYDMAVEWCLLQERADKSWRRLYQRQGEELRKLKAKLNVK 762 PWEE M+ AHEQG LVLL+NLDPS TS+EV+D+IW FK+SCT +IQ+TA SSPHSGQAFVIF+++E AE + KL+E C ++SNGRPLVGS PCFP K+ F+GH + LR+ QREMK+AVSTSHCSQPN +EYDMA+EWCLLQ+R+D + R+L Q+Q +ELRKL+A L K Sbjct: 365 PWEETMQTAHEQGTLVLLQNLDPSYTSAEVEDLIWQAFKQSCTAKMIQRTARSSPHSGQAFVIFQKREVAEMAVAKLDEVCLMLSNGRPLVGSIAAPCFPGKQSTFFGHLTINKLRIHMQREMKEAVSTSHCSQPNTLEYDMAMEWCLLQDRSDLALRKLRQQQEQELRKLRATLKSK 542
BLAST of Ca_01875 vs. TrEMBL
Match: A5AUS7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042543 PE=4 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 7.737e-63 Identity = 113/165 (68.48%), Postives = 136/165 (82.42%), Query Frame = 1 Query: 220 KPMPWEERMRNAHEQGKLVLLENLDPSLTSSEVQDIIWLGFKESCTVMVIQKTAESSPHSGQAFVIFKRKEAAESVIRKLEEGCFLMSNGRPLVGSFGLPCFPEKKPIFYGHHVNDHLRLQTQREMKDAVSTSHCSQPNNIEYDMAVEWCLLQERADKSWRRLYQ 714 K PWEERM+ AH+QG LVLL+NLDP+ TS+EV+DI+W GFKESCT +IQ+T SSPHSGQAFVIFK ++AA S IRKLEEGC L+SNGRPLVGSFG PCFP K+ F GH D +++Q QREMK AVSTSHCSQPN IEY+MA++WCL QER+D W++LY+ Sbjct: 203 KGKPWEERMQTAHQQGTLVLLQNLDPAYTSAEVEDIVWHGFKESCTARMIQRTTISSPHSGQAFVIFKTRDAAVSAIRKLEEGCLLLSNGRPLVGSFGTPCFPGKQSTFVGHLSIDKVKVQMQREMKQAVSTSHCSQPNTIEYEMAMDWCLQQERSDSCWKKLYK 367
BLAST of Ca_01875 vs. TrEMBL
Match: B9RS64_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0803370 PE=4 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 1.510e-58 Identity = 107/184 (58.15%), Postives = 137/184 (74.46%), Query Frame = 1 Query: 202 DRSKWFKPMPWEERMRNAHEQGKLVLLENLDPSLTSSEVQDIIWLGFKESCTVMVIQKTAESSPHSGQAFVIFKRKEAAESVIRKLEEGCFLMSNGRPLVGSFGLPCFPEKKPIFYGHHVNDHLRLQTQREMKDAVSTSHCSQPNNIEYDMAVEWCLLQERADKSWRRLYQRQGEELRKLKAKL 753 D+ KWFK +PWEER++ AH +G++VLL+NLDPS T EV+DI+W K+SCT +I TA SSPHSGQAF IFK +EAAE+ + KL+EGC + S GRPLVGS FP K ++GH D R Q QR M++AVSTSHCSQPN IEYDMA+EWC LQE+ ++ W LY++ G+ELRKL++ L Sbjct: 542 DKIKWFKGLPWEERIKAAHAEGRIVLLQNLDPSFTGLEVEDIVWHALKQSCTAKMIPCTAFSSPHSGQAFAIFKTREAAETAVTKLDEGCLMTSYGRPLVGSIAKLSFPGKPSTYFGHMSIDKTRHQMQRVMREAVSTSHCSQPNTIEYDMALEWCFLQEQTNQEWELLYKQHGKELRKLESTL 725
BLAST of Ca_01875 vs. TrEMBL
Match: K4D685_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc11g012810.1 PE=4 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 5.202e-51 Identity = 103/188 (54.79%), Postives = 135/188 (71.81%), Query Frame = 1 Query: 202 DRSKWFKPMPWEERMRNAHEQGKLVLLENLDPSLTSSEVQDIIWLGFKESCTVMVIQKTAESSPHSGQAFVIFKRKEAAESVIRKLEEGCFLMSNGRPLVGSF-GLPCFPEKKPIFYGHHVNDHLRLQTQREMKDAVSTSHCSQPNNIEYDMAVEWCLLQERADKSWRRLYQRQGEELRKLKAKLNVK 762 + SKWF+ PWEE ++ ++ + L+LLENL+P TS EV+DIIW +E+CT ++Q+TA SSP+SG+A V FK +EAA V +KL EGC ++SN RPLV SF LP P F GH D LRLQ+QREMK+AVSTSHCSQPN IE++M EW LLQ R+D W RLY++Q +ELRK+ ++L K Sbjct: 402 ESSKWFEAPPWEEVLQTSNLERALILLENLNPEYTSGEVEDIIWHACRENCTAKMVQRTAFSSPYSGRALVAFKTREAAVRVSKKLTEGCLMVSNQRPLVASFVTLPKTEGNTPSFAGHLCVDKLRLQSQREMKEAVSTSHCSQPNTIEHEMGFEWRLLQSRSDSWWNRLYKQQKDELRKIASELKRK 589
BLAST of Ca_01875 vs. TrEMBL
Match: M0T7S9_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 1.566e-47 Identity = 97/188 (51.60%), Postives = 133/188 (70.74%), Query Frame = 1 Query: 199 IDRSKWFKPMPWEERMRNAHEQGKLVLLENLDPSLTSSEVQDIIWLGFKESCTVMVIQKTAESSPHSGQAFVIFKRKEAAESVIRKLEEGCFLMSNGRPLVGSFGLPCFPEKKPIFYGHHVNDHLRLQTQREMKDAVSTSHCSQPNNIEYDMAVEWCLLQERADKSWRRLYQRQGEELRKLKAKLNVK 762 +DRSKWFK +PWEERM+ A EQG LV +ENLDP TSSEV+DII+ K+SCT VIQ+T +P+ GQA+VIFK ++AA+S + K+ +GC + NG PL+ S G+ P K +GH D +LQ REM+ AVSTSHCSQPN IEY+MA++W ++QER+ + L++ Q +EL+ +K +L K Sbjct: 23 VDRSKWFKGLPWEERMQKADEQGTLVFIENLDPLFTSSEVEDIIYHTLKQSCTARVIQQTLFQNPNYGQAYVIFKTRDAADSAVSKINKGCIQLPNGSPLICSKGMLKVP--KSSMFGHLSVDKNKLQ-MREMRRAVSTSHCSQPNTIEYEMAMDWLVIQERSVRCLNALHKGQADELKAIKKRLRTK 207
BLAST of Ca_01875 vs. DB:Swiss
Match: ASI1_ARATH (Protein ANTI-SILENCING 1 OS=Arabidopsis thaliana OX=3702 GN=ASI1 PE=4 SV=2) HSP 1 Score: 202.986 bits (515), Expect = 1.076e-59 Identity = 99/226 (43.81%), Postives = 145/226 (64.16%), Query Frame = 1 Query: 88 MSARGATFHLKKSGLCRLGDCGRKTXXXXXXXXXXXXIDRSKWFKPMPWEERMRNAHEQGKLVLLENLDPSLTSSEVQDIIWLGFKESCTVMVIQKTAESSPHSGQAFVIFKRKEAAESVIRKLEEGCFLMSNGRPLVGSFGLPCFPEKKPIFYGHHVNDHLRLQTQREMKDAVSTSHCSQPNNIEYDMAVEWCLLQERADKSWRRLYQRQGEELRKLKAKLNVKI 765 MSA + + + +CR D G+ SKWF+ +PWEE MR A ++G +VLL+NLDP+ TS EV+DI++ + C +I++T+ + PH G+A VIFK +E AE VIR+L+EGC L+S+GRPLV SF P KP + H+ H + QT+REM+DAV+TSH SQPNN+E+DMA+EWCL Q R +++ + +RQ EE++ L+ +K+ Sbjct: 443 MSADDNERNYQVTEVCRRPDAGK-----------------SKWFRSLPWEESMREAEKKGTVVLLQNLDPTYTSDEVEDIVYSALNQQCEARMIERTSVTIPHIGEALVIFKTREVAERVIRRLDEGCLLLSSGRPLVASFA-KITPPGKPSLFSGHIKLH-KTQTRREMRDAVATSHSSQPNNLEFDMAMEWCLHQARHEQASESVSKRQLEEMKSLRINFKLKL 649 The following BLAST results are available for this feature:
BLAST of Ca_01875 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_01875 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_01875_v1.0_kabuli ID=Ca_01875_v1.0_kabuli; Name=Ca_01875; organism=Cicer arietinum; type=mRNA; length=768bpback to top protein sequence of Ca_01875_v1.0_kabuli >Ca_01875_v1.0_kabuli ID=Ca_01875_v1.0_kabuli; Name=Ca_01875_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=255bpback to top mRNA from alignment at Ca5:33818678..33821240+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_01875_v1.0_kabuli ID=Ca_01875_v1.0_kabuli; Name=Ca_01875; organism=Cicer arietinum; type=mRNA; length=2563bp; location=Sequence derived from: Ca5:33818678..33821240+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca5:33818678..33821240+ >Ca_01875_v1.0_kabuli ID=Ca_01875_v1.0_kabuli; Name=Ca_01875; organism=Cicer arietinum; type=CDS; length=768bp; location=Sequence derived from: Ca5:33818678..33821240+ (Cicer arietinumback to top |