Ca_04701, Ca_04701_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_04701
Unique NameCa_04701_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length504
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca5chromosomeCa5:30246555..30250766 -Cicer arietinum CDC Frontier genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum CDC Frontier genome v1.02013-01-01
Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL2013-10-24
BLAST: C. arietinum CDC Frontier (kabuli), Swissprot2019-05-21
Expression: Chickpea heat stress response2023-09-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR381Pisum sativum Cameor genome v1aPisum sativum
capsR389Pisum sativum Cameor genome v1aPisum sativum
cavuR444Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR501Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0627Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0290Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0337Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0392Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0763Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1060Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL572Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR353Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR426Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR431Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR419Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR479Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR413Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR189Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL564Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR393Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Psat05G0003100-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Psat5g001840.1Pisum sativum Cameor genome v1aPisum sativum
Phvul.009G118300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Tiffany.R1.4g178960.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-KK1_024461Cajanus cajan Asha genome v1.0Cajanus cajan
Vfaba.Hedin2.R1.4g233200.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-TanjilR_12288Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
LR48_mrnaVigan04g257100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Va04G072840.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
jg13412.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.model.Chr09.1032Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_022781106.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun09g276700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004500662.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_04701-CDS1Ca_04701-CDS1Cicer arietinumCDS
Ca_04701-CDS2Ca_04701-CDS2Cicer arietinumCDS
Ca_04701-CDS3Ca_04701-CDS3Cicer arietinumCDS
Ca_04701-CDS4Ca_04701-CDS4Cicer arietinumCDS
Ca_04701-CDS5Ca_04701-CDS5Cicer arietinumCDS
Ca_04701-CDS6Ca_04701-CDS6Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_04701_v1.0_kabuliCa_04701_v1.0_kabuliCicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_04701 vs. TrEMBL
Match: G7J8K4_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_3g118100 PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 1.145e-70
Identity = 140/172 (81.40%), Postives = 149/172 (86.63%), Query Frame = 1 
Query:    1 MLDN--LHTPESA-TAVKRYAPPNQRNRSTNRRK--SSDRLDRTNSVGNDLEKNQVFSSRNIQVPDHGDASSSNILNENHYSRLIALEGCSGSAASQLLNDRWTAAIQSYNNPKDSSEKPVMYSGGTSVWTQFRLPHQIMSPAAGATSSVSQLDFLGELSRQMHIANPSFST 501
            ML+N     PES    VKRYAPPNQRNRS N R+  SSDRLDR+NSVG+D+EKNQV SS+NIQV DHG ASSSNI NENHYSR IAL+GCS SAASQLL+DRWTA IQSYNNPKDSSEKPVMYSGGTSVWTQFRLPHQIMSPAA A+SSVSQLDFLGEL RQMH ANPSFST
Sbjct:    2 MLENPQAQPPESGPVVVKRYAPPNQRNRSINNRRKSSSDRLDRSNSVGSDIEKNQVASSKNIQVTDHGHASSSNIFNENHYSRFIALQGCSSSAASQLLSDRWTAVIQSYNNPKDSSEKPVMYSGGTSVWTQFRLPHQIMSPAASASSSVSQLDFLGELRRQMHSANPSFST 173
[Close]
BLAST of Ca_04701 vs. TrEMBL
Match: I3SMS5_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 3.331e-70
Identity = 134/167 (80.24%), Postives = 144/167 (86.23%), Query Frame = 1 
Query:    1 MLDNLHTPESATAVKRYAPPNQRNRSTNRRKSSDRLDRTNSVGNDLEKNQVFSSRNIQVPDHGDASSSNILNENHYSRLIALEGCSGSAASQLLNDRWTAAIQSYNNPKDSSEKPVMYSGGTSVWTQFRLPHQIMSPAAGATSSVSQLDFLGELSRQMHIANPSFST 501
            ML+NLH    + +VKRYAPPNQRNRSTNRRKSSDRLDRTNS+GNDLEKNQ  SSRN+QV D  DA SSN++NEN YSR +AL+GCS SAASQLLNDRWTAAIQSYNN KDS EKPVMYSGGTSVWT FRLPHQIMSPAA A  SVSQLDFLGEL+RQM   NPSFST
Sbjct:    1 MLENLHPAPPSESVKRYAPPNQRNRSTNRRKSSDRLDRTNSIGNDLEKNQFASSRNVQVQDRIDAVSSNLVNENPYSRFVALDGCSCSAASQLLNDRWTAAIQSYNNSKDSPEKPVMYSGGTSVWTHFRLPHQIMSPAASAPPSVSQLDFLGELNRQMQSVNPSFST 167
[Close]
BLAST of Ca_04701 vs. TrEMBL
Match: I3T648_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 2.159e-69
Identity = 133/167 (79.64%), Postives = 143/167 (85.63%), Query Frame = 1 
Query:    1 MLDNLHTPESATAVKRYAPPNQRNRSTNRRKSSDRLDRTNSVGNDLEKNQVFSSRNIQVPDHGDASSSNILNENHYSRLIALEGCSGSAASQLLNDRWTAAIQSYNNPKDSSEKPVMYSGGTSVWTQFRLPHQIMSPAAGATSSVSQLDFLGELSRQMHIANPSFST 501
            M +NLH    + +VKRYAPPNQRNRSTNRRKSSDRLDRTNS+GNDLEKNQ  SSRN+QV D  DA SSN++NEN YSR +AL+GCS SAASQLLNDRWTAAIQSYNN KDS EKPVMYSGGTSVWT FRLPHQIMSPAA A  SVSQLDFLGEL+RQM   NPSFST
Sbjct:    1 MPENLHPAPPSESVKRYAPPNQRNRSTNRRKSSDRLDRTNSIGNDLEKNQFASSRNVQVQDRIDAVSSNLVNENPYSRFVALDGCSCSAASQLLNDRWTAAIQSYNNSKDSPEKPVMYSGGTSVWTHFRLPHQIMSPAASAPPSVSQLDFLGELNRQMQSVNPSFST 167
[Close]
BLAST of Ca_04701 vs. TrEMBL
Match: K7KHD8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 3.226e-65
Identity = 131/171 (76.61%), Postives = 139/171 (81.29%), Query Frame = 1 
Query:    1 MLDNLHTP----ESATAVKRYAPPNQRNRSTNRRKSSDRLDRTNSVGNDLEKNQVFSSRNIQVPDHGDASSSNILNENHYSRLIALEGCSGSAASQLLNDRWTAAIQSYNNPKDSSEKPVMYSGGTSVWTQFRLPHQIMSPAAGATSSVSQLDFLGELSRQMHIANPSFST 501
            ML+NL  P    ESA  VKRYAPPNQRNRS NRRKSSDRLDRTNSVGNDLEKNQV SSR++ +PDH DA SSN+LNENHYSR IALEGCS SAA+QLLNDRWTAAIQSYNNPKDSSEKPVMYS GTSVWT           A  A+SSVSQ DFLGEL RQMH ANPSF+T
Sbjct:   69 MLENLQAPPSTTESAPVVKRYAPPNQRNRSANRRKSSDRLDRTNSVGNDLEKNQVASSRSVHIPDHEDAGSSNLLNENHYSRFIALEGCSCSAAAQLLNDRWTAAIQSYNNPKDSSEKPVMYSSGTSVWT----------AATSASSSVSQRDFLGELRRQMHSANPSFTT 229
[Close]
BLAST of Ca_04701 vs. TrEMBL
Match: C6SW96_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 3.226e-65
Identity = 131/171 (76.61%), Postives = 139/171 (81.29%), Query Frame = 1 
Query:    1 MLDNLHTP----ESATAVKRYAPPNQRNRSTNRRKSSDRLDRTNSVGNDLEKNQVFSSRNIQVPDHGDASSSNILNENHYSRLIALEGCSGSAASQLLNDRWTAAIQSYNNPKDSSEKPVMYSGGTSVWTQFRLPHQIMSPAAGATSSVSQLDFLGELSRQMHIANPSFST 501
            ML+NL  P    ESA  VKRYAPPNQRNRS NRRKSSDRLDRTNSVGNDLEKNQV SSR++ +PDH DA SSN+LNENHYSR IALEGCS SAA+QLLNDRWTAAIQSYNNPKDSSEKPVMYS GTSVWT           A  A+SSVSQ DFLGEL RQMH ANPSF+T
Sbjct:    1 MLENLQAPPSTTESAPVVKRYAPPNQRNRSANRRKSSDRLDRTNSVGNDLEKNQVASSRSVHIPDHEDAGSSNLLNENHYSRFIALEGCSCSAAAQLLNDRWTAAIQSYNNPKDSSEKPVMYSSGTSVWT----------AATSASSSVSQRDFLGELRRQMHSANPSFTT 161
[Close]
BLAST of Ca_04701 vs. TrEMBL
Match: I1K6X4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 2.312e-63
Identity = 126/170 (74.12%), Postives = 135/170 (79.41%), Query Frame = 1 
Query:    1 MLDNLHTP---ESATAVKRYAPPNQRNRSTNRRKSSDRLDRTNSVGNDLEKNQVFSSRNIQVPDHGDASSSNILNENHYSRLIALEGCSGSAASQLLNDRWTAAIQSYNNPKDSSEKPVMYSGGTSVWTQFRLPHQIMSPAAGATSSVSQLDFLGELSRQMHIANPSFST 501
            ML+NL  P   ESA  VKRYAPPNQRNRS NRRKSSDRLDRTNS+GNDLEKNQV  SR++ +PDHGDA SSN+LNENHYSRLIALEGCS SAA+QLLNDRWTAA+QSYNNPKDSSEKPVMYS GTS WT FR P Q               DFLGEL RQMH ANPSF+T
Sbjct:    1 MLENLQAPPPTESAPVVKRYAPPNQRNRSANRRKSSDRLDRTNSIGNDLEKNQVAYSRSVHIPDHGDAGSSNLLNENHYSRLIALEGCSCSAAAQLLNDRWTAALQSYNNPKDSSEKPVMYSSGTSGWTPFRPPQQ---------------DFLGELRRQMHSANPSFTT 155
[Close]
BLAST of Ca_04701 vs. TrEMBL
Match: M5VNG7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012306mg PE=4 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 1.153e-46
Identity = 101/175 (57.71%), Postives = 127/175 (72.57%), Query Frame = 1 
Query:    1 MLDNLHTPESATA-----VKRYAPPNQRNRSTNRRKSSDRLDRTNSV--GNDLEKNQVFSSRNIQVPDHGDASSSNILNENHYSRLIALEGCSGSAASQLLNDRWTAAIQSYNNPK-DSSEKPVMYSGGTSVWTQFRLPHQIMSPAAGATSSVSQLDFLGELSRQMHIANPSFST 501
            ML+N  +  +A A     VKRYAPP+QRNR  NRRKS+DR DRTN+   GNDLEKNQ+ SSR++   DHGDASSS++LNEN    L+ALEGCS SAA QLLN+RW AA+  +N+P  D SE+PVMY+GG + W QF+LPHQ+M+   GA S  S +DFL EL R  +I++ SF T
Sbjct:    1 MLENPTSAAAAAADPPANVKRYAPPSQRNRPLNRRKSADRFDRTNNPQSGNDLEKNQISSSRSLSGMDHGDASSSSLLNENSRPGLLALEGCSSSAAFQLLNNRWAAAMHCFNDPSVDLSERPVMYTGGGAAWGQFQLPHQLMASTGGAGSPGSSMDFLSELRRSKNISHASFRT 175
[Close]
BLAST of Ca_04701 vs. TrEMBL
Match: B9SEZ9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1211500 PE=4 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.723e-42
Identity = 95/160 (59.38%), Postives = 113/160 (70.62%), Query Frame = 1 
Query:   22 PESATAVKRYAPPNQRNRSTNRRKSSDRLDRTNSV-GNDLEKNQVFSSRNIQVPDHGDASSSNILNENHYSRLIALEGCSGSAASQLLNDRWTAAIQSYNNPK-DSSEKPVMYSGGT-SVWTQFRLPHQIMSPAAGATSSVSQLDFLGELSRQMHIANPS 492
            P+S+  VKRYAPPNQRNRS NRRKS DRLDR+NS+  ND EKNQ   SRNI V DH D  SSN+++EN + RLIALEGC  S ASQLLN+RW  A+ +YN+   D SE+P MYSG + S W   RLPHQ M  A    SS SQ+DFL EL R +  A+P+
Sbjct:   10 PDSSAVVKRYAPPNQRNRSLNRRKSGDRLDRSNSLFANDAEKNQHVPSRNIPVLDHFDIGSSNLMHENSHPRLIALEGCYRSEASQLLNERWAQAMHNYNDTSVDLSERPAMYSGSSASAWGHSRLPHQFMLQANSGPSSGSQMDFLSELRRAIRDASPN 169
[Close]
BLAST of Ca_04701 vs. TrEMBL
Match: G7J8K5_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_3g118100 PE=4 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 3.592e-40
Identity = 89/117 (76.07%), Postives = 97/117 (82.91%), Query Frame = 1 
Query:    1 MLDN--LHTPESA-TAVKRYAPPNQRNRSTNRRK--SSDRLDRTNSVGNDLEKNQVFSSRNIQVPDHGDASSSNILNENHYSRLIALEGCSGSAASQLLNDRWTAAIQSYNNPKDSS 336
            ML+N     PES    VKRYAPPNQRNRS N R+  SSDRLDR+NSVG+D+EKNQV SS+NIQV DHG ASSSNI NENHYSR IAL+GCS SAASQLL+DRWTA IQSYNNPKDSS
Sbjct:    2 MLENPQAQPPESGPVVVKRYAPPNQRNRSINNRRKSSSDRLDRSNSVGSDIEKNQVASSKNIQVTDHGHASSSNIFNENHYSRFIALQGCSSSAASQLLSDRWTAVIQSYNNPKDSS 118
[Close]
BLAST of Ca_04701 vs. TrEMBL
Match: M5W6K7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012306mg PE=4 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 5.186e-39
Identity = 86/142 (60.56%), Postives = 107/142 (75.35%), Query Frame = 1 
Query:    1 MLDNLHTPESATA-----VKRYAPPNQRNRSTNRRKSSDRLDRTNSV--GNDLEKNQVFSSRNIQVPDHGDASSSNILNENHYSRLIALEGCSGSAASQLLNDRWTAAIQSYNNPK-DSSEKPVMYSGGTSVWTQFRLPHQI 402
            ML+N  +  +A A     VKRYAPP+QRNR  NRRKS+DR DRTN+   GNDLEKNQ+ SSR++   DHGDASSS++LNEN    L+ALEGCS SAA QLLN+RW AA+  +N+P  D SE+PVMY+GG + W QF+LPHQ+
Sbjct:    1 MLENPTSAAAAAADPPANVKRYAPPSQRNRPLNRRKSADRFDRTNNPQSGNDLEKNQISSSRSLSGMDHGDASSSSLLNENSRPGLLALEGCSSSAAFQLLNNRWAAAMHCFNDPSVDLSERPVMYTGGGAAWGQFQLPHQV 142
The following BLAST results are available for this feature:
BLAST of Ca_04701 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7J8K4_MEDTR1.145e-7081.40Uncharacterized protein OS=Medicago truncatula GN=... [more]
I3SMS5_LOTJA3.331e-7080.24Uncharacterized protein OS=Lotus japonicus PE=2 SV... [more]
I3T648_LOTJA2.159e-6979.64Uncharacterized protein OS=Lotus japonicus PE=2 SV... [more]
K7KHD8_SOYBN3.226e-6576.61Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
C6SW96_SOYBN3.226e-6576.61Putative uncharacterized protein OS=Glycine max PE... [more]
I1K6X4_SOYBN2.312e-6374.12Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
M5VNG7_PRUPE1.153e-4657.71Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
B9SEZ9_RICCO1.723e-4259.38Putative uncharacterized protein OS=Ricinus commun... [more]
G7J8K5_MEDTR3.592e-4076.07Uncharacterized protein OS=Medicago truncatula GN=... [more]
M5W6K7_PRUPE5.186e-3960.56Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]

Pages

back to top
BLAST of Ca_04701 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Expression

Available Analyses

Select an Expression Analysis

Select a property to group and sort biological samples

Select a property to color biological samples

Hover the mouse over a column in the graph to view more information about that biological sample. You can click and drag to rearrange groups along the x-axis. You can also click and drag to move the legend.

Only Non-Zero Values | Reset

Download expression dataset for this feature
Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_04701_v1.0_kabuli ID=Ca_04701_v1.0_kabuli; Name=Ca_04701; organism=Cicer arietinum; type=mRNA; length=504bp
ATGCTAGATAATCTTCACACACCCGAATCTGCAACTGCGGTGAAGCGCTA
TGCTCCACCCAATCAGAGGAACCGTTCTACCAACAGGCGCAAATCATCTG
ATCGGCTTGATCGAACAAACAGTGTTGGCAATGATTTAGAAAAGAACCAA
GTTTTCTCTTCAAGAAACATACAAGTTCCAGATCATGGAGATGCTAGCAG
CAGTAATATTCTTAATGAGAATCATTATTCACGACTCATAGCTTTAGAAG
GCTGTAGTGGCAGTGCAGCTTCCCAGCTTCTTAATGATCGTTGGACAGCT
GCAATACAGTCCTACAATAATCCCAAAGATTCATCTGAAAAACCAGTTAT
GTATTCGGGTGGGACATCAGTTTGGACACAGTTCAGACTCCCTCATCAGA
TTATGTCACCAGCTGCAGGTGCTACCTCTTCTGTGTCACAGCTGGATTTC
CTGGGAGAACTTAGTCGCCAAATGCATATTGCCAATCCTAGTTTCAGCAC
ATGA
back to top

protein sequence of Ca_04701_v1.0_kabuli

>Ca_04701_v1.0_kabuli ID=Ca_04701_v1.0_kabuli; Name=Ca_04701_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=167bp
MLDNLHTPESATAVKRYAPPNQRNRSTNRRKSSDRLDRTNSVGNDLEKNQ
VFSSRNIQVPDHGDASSSNILNENHYSRLIALEGCSGSAASQLLNDRWTA
AIQSYNNPKDSSEKPVMYSGGTSVWTQFRLPHQIMSPAAGATSSVSQLDF
LGELSRQMHIANPSFST
back to top

mRNA from alignment at Ca5:30246555..30250766-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_04701_v1.0_kabuli ID=Ca_04701_v1.0_kabuli; Name=Ca_04701; organism=Cicer arietinum; type=mRNA; length=4212bp; location=Sequence derived from: Ca5:30246555..30250766- (Cicer arietinum
ATGCTAGATAATCTTCACACACCCGAATCTGCAACTGCGGTGAAGCGCTA
TGCTCCACCCAATCAGAGGTATTCTAATATTCTATTCACTTTTTCATTTT
TCTTTTCTTTTTTTCTATTTTCTAATTTATTTTGCTGCAGGAACCGTTCT
ACCAACAGGCGCAAATCATCTGGTTAGTTCTCTTCTCATACTTATTACGC
CACTGCCTAATTTCATATTTTCATTTCCCTTATTTTTCACTTAGCAACGT
CAAACATATAATATTCCTTGTGCCGTGCTTGTTTTCTTTATTTTTTTTAT
TTAACTCTTTTTATGATCCCTTTGCCGCCTTTTCTTCAACTATGGTCTGC
TATGCAACACAAACAAGAATAATGTTTCAATGTCAACTTCATAATCTCAC
CAATATTTTAATTAATGTTCATTTTGGATTTTGGAGTTCATATCATTTAG
GTAAAAACTCTTATTTTCTTTCTCTTTGACCTCATTTTCTGAGGTAACTG
CTGAACATAACGATAACAAATGAAATTCCATATCTGAAACTCTATATTTT
TTAATTAGATCAACTTTTAATTTTACTTTTGTTAGTTGAATGTATATTTC
ATTGGAAGATTTCTCTGTAGGTGAATATTTTAGGTATAGAATGTTCATAA
AAAATTAGGCCCATAGCATGGATGTTTTCTAAAGAGGAAGTTTTTCACGG
AGAAGTTGGTATTTATTCAGGTTGTGAATGCTAGGTATTTATTCACATGG
TTTCCTTAATCCCTTCCAGCAATGATGGAAAAGTCCTACACGAGCTGTAT
CATAAGTTTGGATGTCATTCCTATCCTCCTCTCATGACCACACTTTTGAA
TTGAAGCACCCCATTTGAAAAGATTAATTTTATTTTTTTGAAAAGAGAGT
GACTTGCTCATGTTTGGACCACTTTAAAAGTGAACATATTAGGAGCGCCC
TAGAAATTATAGGTGAATGTCCTGAATTTTCATCATAAACGTTGAGAAGT
TGTGCGAAACAATGTTCTTTTATATGAACATAATTGTGCTACATTTACAC
ACCTTACATATGCATGGAGTTCTATGGGTTTATATAACATGAAGAAATGG
TATTATTGAACTATTAATTTATATATTGTTAGAAGATATAAAAGTATCTT
ATAATATTTTGATTTTATAGATTTAGTTTCTATATTTCTTTGTTATGATG
ATTTGTTTCCCTGTTTAATTTTTTTTGGACATTGTTTCCCTATTTAATTA
GGATTTGGAATCTTGTATTACTATAAATAAGGGTTCTCTTCAGGCTCTTT
CTATCAAATCATTATCAATGACAACAACAACCAAGTATCATATCACTTGG
TGGGTCGGCTACATTGATCAAACTACACCATAATGTTCTACATACATCAT
ATCTCTATCCAAATCATTGACCTTTAAGTATTCTTCTAATAGTCTCTCCT
ATAGTTTTTTGTCTTTCTCTTTCTCGTGTGGTTGACCTACCCTCCATCTA
ATCTACTCTATTGAGGCATTGGGCTACCTCCCACACATACCCAAACCACC
TAAGTCGAGATTCAATTATCTTTTCAATACTAAGTGTTACCTCAACCCTC
TCTGATGTTATTGTTCGTAATTCTATCTTGTCTAGTGCTCTAGTTTTTCT
GCGCATCTTGCCCAACATTCCCATCATTGCTAATTTAAAGTTTTTATTCT
CGTGTTGTATAAAAACATAATCATCATATCATAATCCTCAACCATATTGA
TAATTCAAAGTTTTTATTTTTTCCCTTCCCTCAATCTAAAACTTTGTAAC
TTCATATATATCCTAATTTTAAAGTTATATTATTTTCTTCTACGTCAACC
AAAGTAACACCAAATTTTTGTTTACACGAAAAATGTTGGGGTCAAATGTA
AAATTTGGAAACGATAAACATTAATAAATAAAAGAGCTATTATCCTAGCT
AAAACATTGAATCGGTGGGGGTCCCTGGCACCTTTTGACTCATGATAACA
GTGTTGGCTTCAGCCATCAAGCACTGTCTTACGGGAGAGAAATTTAAGGA
AATTTCATATGAGGAGAACTGTCCATTACTGTTAGTATCAGATCTGTGTA
AAATTAGTGGTTGAAGTTGGGAATAAGTCTTTATGCTCTTGGTGCAAGTG
AACGCCTTCCTTTTTTTTTTAATGTATGTTTTATTTCCCATTTACATAAT
TGACAGTGAGCAGTGGCAAAGCTTTTGGCTCATTTGCTGCTACTTCCTTC
CTGCTCTATTTTGTTTGTTTCTAATTTGTACATGTTGGTTGGTTTCTATC
AAATTTTGTAGATCGGCTTGATCGAACAAACAGTGTTGGCAATGATTTAG
AAAAGAACCAAGTTTTCTCTTCAAGAAACATACAAGTTCCAGATCATGGA
GATGCTAGCAGCAGTAATATTCTTAATGAGAATCATTATTCACGACTCAT
AGCTTTAGAAGGCTGTAGTGGCAGTGCAGCTTCCCAGCTTCTTAATGATC
GTGAGTGTACCCCGACTTTTGTTTGAGAGCACTTGTATATGTTTGGTTAT
TAAATTAAATGCTATTTTTCACTGAGGATTTTTTTATTTCTTTAGGTTTT
CACATTAGAACATACTATAACAAGCATGGGAATATATTGATTCATTTTAC
TTCATTCTATTTGATACCATAAGTCCAAGCATGGGAATATATTGACATAT
TGATTCAATCACAACAACTAGCCTATTCCATTTTACTTCATTCTATTTGA
TACCATAAGTCCAAGCATGGGAATATATTGATTGTGATGGTTTGTTTGAG
CTTGTCTGTGGAAACGGGATGCCTAAGGCCTACTTTTAATTTTATTTAAC
ATGATTTGTGCTCCTGCATTCTCTATGAATTCCCGAAGTACTAGTCTGTG
TTGTGTTGAGTTAGTTTCTTTGATAGATATTTGCCAACTCTCAAGTCCAT
AAAAAAAAATTAAAATTATTAGGACTTGCTTTGCTTTTATACTTTTTTAT
GGTTGCATACGTTTTGTTTCATTAAATGTTCTGTTGTCTTTCGTATTTCA
ACTAGTTTGCACTCCACACACAAGAATTTATTTAATTACAGATAATAGAG
AGAGGGATGGAGGGAGGGGTGGGTAGGTAGGGCAGGAGTTGTTCATTTAC
TGTTATCGGTTTATTATGTCAATATCCTTGGTTAACATTACCTGTTATCT
CTGTTGGCTGTGAATTTCTGTTTCCAGGTTGGACAGCTGCAATACAGTCC
TACAATAATCCCAAAGATTCATCTGGTTAGTGGGCATTCATTAAAATGAC
TAGCTTTTCCATTTTATGATATCTGTGACTGTATCTAATATTTAGTGTTG
ATGGAATTTCAACTTGTTTTGCATGTCTCAAAAGTTTCGGGTGAATTGAG
TTGAGATCACCAGTAAAACTATGAAATGATTCAAACTGACTACTGTTGCA
ATAATTGACTAATTGCTATAAACTTAGTAAGTAGATATGTTCAAAAGTGA
TATATTATGCAATTGTGATTACACAGTTGCAACACTAACGAGAGTTTGGT
AACTCTAACTAAAATATGTTGTTCCTCAATTGTCATACACTTCTTTAGTG
TTTGAGGACTCATCTTAACCACATGCAAAATCAGTAATTTAACCAATTAA
TCGCAATTTATAATACATTTAGTCCAAGTGTTTGGATTAGTTCAAGCTGA
GAGGGCTTATCATCATTTCTTTTAACTAAAGCATCATTCTTTAATCAGCT
TTGTGGTGTTGACACTCATAGTTTCTGTATTGCTGCTGGGATGTCTTGAT
TAACCATTTTACACATTTGTGATCATAAATTATGCGGAGCATTGATATCA
TGAATGGCCTTCATAAATGCAGTGAAAGTTGATTATGTGCTGCATATGAT
CTGTCAGTTACATTCTTAATTATGCTTATTATTAGTTTTCCTTCCTCACC
ACTTTCACATTTCAGAAAAACCAGTTATGTATTCGGGTGGGACATCAGTT
TGGACACAGTTCAGACTCCCTCATCAGGTACCCTTTAAATAAATCTCCTT
CCCCTCCCTCTTGCCTTCTAAATCTAATGTGATGTTCTAATATATATTTT
CCCTCAGATTATGTCACCAGCTGCAGGTGCTACCTCTTCTGTGTCACAGC
TGGATTTCCTGGGAGAACTTAGTCGCCAAATGCATATTGCCAATCCTAGT
TTCAGCACATGA
back to top

Coding sequence (CDS) from alignment at Ca5:30246555..30250766-

>Ca_04701_v1.0_kabuli ID=Ca_04701_v1.0_kabuli; Name=Ca_04701; organism=Cicer arietinum; type=CDS; length=504bp; location=Sequence derived from: Ca5:30246555..30250766- (Cicer arietinum
ATGCTAGATAATCTTCACACACCCGAATCTGCAACTGCGGTGAAGCGCTA
TGCTCCACCCAATCAGAGGAACCGTTCTACCAACAGGCGCAAATCATCTG
ATCGGCTTGATCGAACAAACAGTGTTGGCAATGATTTAGAAAAGAACCAA
GTTTTCTCTTCAAGAAACATACAAGTTCCAGATCATGGAGATGCTAGCAG
CAGTAATATTCTTAATGAGAATCATTATTCACGACTCATAGCTTTAGAAG
GCTGTAGTGGCAGTGCAGCTTCCCAGCTTCTTAATGATCGTTGGACAGCT
GCAATACAGTCCTACAATAATCCCAAAGATTCATCTGAAAAACCAGTTAT
GTATTCGGGTGGGACATCAGTTTGGACACAGTTCAGACTCCCTCATCAGA
TTATGTCACCAGCTGCAGGTGCTACCTCTTCTGTGTCACAGCTGGATTTC
CTGGGAGAACTTAGTCGCCAAATGCATATTGCCAATCCTAGTTTCAGCAC
ATGA
back to top