Ca_04779, Ca_04779_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_04779
Unique NameCa_04779_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length246
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca5chromosomeCa5:30829269..30829514 +Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR381Pisum sativum Cameor genome v1aPisum sativum
capsR384Pisum sativum Cameor genome v1aPisum sativum
capsR440Pisum sativum Cameor genome v1aPisum sativum
cavuR370Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR444Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR450Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR432Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR504Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0638Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0698Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0100Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0290Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0348Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0392Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0481Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0763Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0963Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1060Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1136Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL041Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL048Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL125Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL205Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL556Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL758Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR353Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR394Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR401Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR443Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR403Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR446Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR451Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR399Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR419Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR438Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR460Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR469Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR354Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR413Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR420Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR189Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR201Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL078Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL264Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL548Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL772Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR393Cicer arietinum
cacarR400Cicer arietinum
cacarR408Cicer arietinum
cacarR430Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
LR48_mrnaVigan08g172600Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-TanjilR_12377Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-KK1_012369Cajanus cajan Asha genome v1.0Cajanus cajan
LR48_mrnaVigan09g024500Vigna angularis Jingnong 6 genome v1.1Vigna angularis
LR48_mrnaVigan07g286900Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-TanjilR_23473Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_17299Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
evm.model.Chr09.1303Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-KK1_007891Cajanus cajan Asha genome v1.0Cajanus cajan
LR48_mrnaVigan01g184300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Phvul.011G044900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
jg35178.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.model.Chr11.1640Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun11g175900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-TanjilR_05374Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_21997Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_22812Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_014663030.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Psat05G0017700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
LR48_mrnaVigan04g253400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigun09g246000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_027334532.1Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_04779-CDS1Ca_04779-CDS1Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_04779_v1.0_kabuliCa_04779_v1.0_kabuliCicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_04779 vs. SwissProt
Match: RADL6_ARATH (Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN=RL6 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.313e-25
Identity = 57/80 (71.25%), Postives = 66/80 (82.50%), Query Frame = 1 
Query:    1 MASNSLSKHKLCDSTWTPKQNKLFEKALAKYDKDTPDRWINVAKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNYKS 240
            MASNS S      S WT  QNK+FE+ALA YDKDTPDRW NVAKAVG K+VEEVKRHY+IL+EDL +IE+GRVP+PNYK+
Sbjct:    1 MASNSRSSI----SPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRVPLPNYKT 76
[Close]
BLAST of Ca_04779 vs. SwissProt
Match: RADL5_ARATH (Protein RADIALIS-like 5 OS=Arabidopsis thaliana GN=RL5 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.141e-24
Identity = 54/80 (67.50%), Postives = 64/80 (80.00%), Query Frame = 1 
Query:    1 MASNSLSKHKLCDSTWTPKQNKLFEKALAKYDKDTPDRWINVAKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNYKS 240
            MAS+S+S      S+WT KQNK+FE+ALA YDKDTPDRW NVAKAVG KS EEVKRHY+IL+EDL +IE   VP+P YK+
Sbjct:    1 MASSSMSS----SSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMNIEQDLVPLPKYKT 76
[Close]
BLAST of Ca_04779 vs. SwissProt
Match: RADL3_ARATH (Protein RADIALIS-like 3 OS=Arabidopsis thaliana GN=RL3 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 6.228e-24
Identity = 52/80 (65.00%), Postives = 64/80 (80.00%), Query Frame = 1 
Query:    1 MASNSLSKHKLCDSTWTPKQNKLFEKALAKYDKDTPDRWINVAKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNYKS 240
            MASNS+S      ++WT K+NKLFE+ALA YD+DTPDRW NVA+AVG KS EEV+RHYE+L+ D+  IESGR P PNY+S
Sbjct:    1 MASNSMSS----SASWTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRDVNDIESGRYPHPNYRS 76
[Close]
BLAST of Ca_04779 vs. SwissProt
Match: RADL1_ARATH (Protein RADIALIS-like 1 OS=Arabidopsis thaliana GN=RL1 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.534e-22
Identity = 48/81 (59.26%), Postives = 63/81 (77.78%), Query Frame = 1 
Query:    1 MASNSLSKHKLCDSTWTPKQNKLFEKALAKYDKDTPDRWINVAKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNYKST 243
            MAS+S+S       +WT KQNK FE+ALA YD+DTP+RW NVAK VG K+ EEVKRHYE+L++D+  IE+G VP PNY+++
Sbjct:    1 MASSSMSSQS--SGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINSIENGHVPFPNYRTS 79
[Close]
BLAST of Ca_04779 vs. SwissProt
Match: RAD_ANTMA (Transcription factor RADIALIS OS=Antirrhinum majus GN=RAD PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.003e-22
Identity = 45/66 (68.18%), Postives = 58/66 (87.88%), Query Frame = 1 
Query:   46 WTPKQNKLFEKALAKYDKDTPDRWINVAKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNYKST 243
            W+ K+NK FE+ALA YDKDTPDRW NVA+AV  ++ EEVK+HYEIL+ED+K+IESG+VP PNY++T
Sbjct:   11 WSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKYIESGKVPFPNYRTT 76
[Close]
BLAST of Ca_04779 vs. SwissProt
Match: RADL4_ARATH (Protein RADIALIS-like 4 OS=Arabidopsis thaliana GN=RL4 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.299e-21
Identity = 49/81 (60.49%), Postives = 62/81 (76.54%), Query Frame = 1 
Query:    1 MASNSLSKHKLCDSTWTPKQNKLFEKALAKYDKDTPDRWINVAKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNYKST 243
            MAS+S+S      S+WT +++K FE ALAK+DKDTPDRW  +A+AVG KS EEVKRHYE+LL D+  IESGR P P Y++T
Sbjct:    1 MASSSMST-----SSWTAREDKQFEMALAKFDKDTPDRWQKIARAVGGKSTEEVKRHYELLLRDVNDIESGRYPQPRYRNT 76
[Close]
BLAST of Ca_04779 vs. SwissProt
Match: RADL2_ARATH (Protein RADIALIS-like 2 OS=Arabidopsis thaliana GN=RL2 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.778e-21
Identity = 47/81 (58.02%), Postives = 62/81 (76.54%), Query Frame = 1 
Query:    1 MASNSLSKHKLCDSTWTPKQNKLFEKALAKYDKDTPDRWINVAKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNYKST 243
            MAS S+S +     +WT KQNK FE+ALA YD+DTPDRW NVA+AVG K+ EE KR Y++L+ D++ IE+G VP P+YK+T
Sbjct:    1 MASGSMSSYG--SGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIESIENGHVPFPDYKTT 79
[Close]
BLAST of Ca_04779 vs. SwissProt
Match: DIV_ANTMA (Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 9.328e-12
Identity = 31/66 (46.97%), Postives = 46/66 (69.70%), Query Frame = 1 
Query:   46 WTPKQNKLFEKALAKYDKDTPDRWINVAKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNYKST 243
            WT  +NK FE ALA +D++TP+RW  VA+ V  K+V +V R Y+ L +D+  IE+G VP+P Y ++
Sbjct:   26 WTAAENKAFENALAVFDENTPNRWERVAERVPGKTVGDVMRQYKELEDDVSSIEAGFVPVPGYSTS 91
[Close]
BLAST of Ca_04779 vs. TrEMBL
Match: G7J732_MEDTR (DnaJ homolog subfamily C member OS=Medicago truncatula GN=MTR_3g116720 PE=4 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 3.543e-35
Identity = 73/81 (90.12%), Postives = 76/81 (93.83%), Query Frame = 1 
Query:    1 MASNSLSKHKLCDSTWTPKQNKLFEKALAKYDKDTPDRWINVAKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNYKST 243
            MAS+SLSKHK CDS WTPKQNKLFEKALAK+DKDTPDRW NVAKAVG KSVEEVKRHYE+LLEDLKHIESG VPIPNYKST
Sbjct:    1 MASSSLSKHKPCDSIWTPKQNKLFEKALAKFDKDTPDRWQNVAKAVGGKSVEEVKRHYELLLEDLKHIESGHVPIPNYKST 81
[Close]
BLAST of Ca_04779 vs. TrEMBL
Match: I1LJC8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 2.808e-32
Identity = 68/81 (83.95%), Postives = 74/81 (91.36%), Query Frame = 1 
Query:    1 MASNSLSKHKLCDSTWTPKQNKLFEKALAKYDKDTPDRWINVAKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNYKST 243
            MAS+SLSK K  DS+WTPKQNKLFEKALAKYDKDTP+RW NVAKAVG KS +EVKRHYEILLEDL+HIESGRVP+P YKST
Sbjct:    1 MASSSLSKQKASDSSWTPKQNKLFEKALAKYDKDTPERWQNVAKAVGGKSADEVKRHYEILLEDLRHIESGRVPLPKYKST 81
[Close]
BLAST of Ca_04779 vs. TrEMBL
Match: K7LSY9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 3.667e-32
Identity = 68/81 (83.95%), Postives = 73/81 (90.12%), Query Frame = 1 
Query:    1 MASNSLSKHKLCDSTWTPKQNKLFEKALAKYDKDTPDRWINVAKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNYKST 243
            MAS+SLSK K  DS+WTPKQNKLFEKALAKYDKDTPDRW NVAKAVG KS +EVKRHYEILLEDL+HIESG VP+P YKST
Sbjct:    1 MASSSLSKQKASDSSWTPKQNKLFEKALAKYDKDTPDRWQNVAKAVGGKSADEVKRHYEILLEDLRHIESGHVPLPKYKST 81
[Close]
BLAST of Ca_04779 vs. TrEMBL
Match: K7KHJ6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 9.032e-31
Identity = 65/81 (80.25%), Postives = 73/81 (90.12%), Query Frame = 1 
Query:    1 MASNSLSKHKLCDSTWTPKQNKLFEKALAKYDKDTPDRWINVAKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNYKST 243
            MAS++LSK K  DS WTPKQNK+FEKALAKYDKDTPDRW NVAKA+G KS ++VKRHY+ILLEDL+HIESG VPIPNYKST
Sbjct:    1 MASSTLSKQKPYDSCWTPKQNKVFEKALAKYDKDTPDRWHNVAKAIGGKSEDDVKRHYQILLEDLRHIESGHVPIPNYKST 81
[Close]
BLAST of Ca_04779 vs. TrEMBL
Match: B9MXN3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1111564 PE=4 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 6.473e-29
Identity = 61/81 (75.31%), Postives = 71/81 (87.65%), Query Frame = 1 
Query:    1 MASNSLSKHKLCDSTWTPKQNKLFEKALAKYDKDTPDRWINVAKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNYKST 243
            MASNSL+  + C S+WTPKQNKLFEKALA YDKDTPDRW NVAKAVG KS EEV+RHYEIL++D++ IESGRVP PNY+S+
Sbjct:    1 MASNSLNSSRNCSSSWTPKQNKLFEKALALYDKDTPDRWHNVAKAVGGKSAEEVERHYEILIKDVREIESGRVPFPNYRSS 81
[Close]
BLAST of Ca_04779 vs. TrEMBL
Match: D7SPC6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g01910 PE=4 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 6.058e-27
Identity = 56/74 (75.68%), Postives = 65/74 (87.84%), Query Frame = 1 
Query:   16 LSKHKLCDSTWTPKQNKLFEKALAKYDKDTPDRWINVAKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNYK 237
            ++  +   S+WTPKQNKLFEKALAKYDKDTPDRW N+AKAVG KS EEVKRHYEIL+ED+KHIESG+VP PNY+
Sbjct:    1 MTSSRTSGSSWTPKQNKLFEKALAKYDKDTPDRWQNIAKAVGGKSAEEVKRHYEILIEDVKHIESGKVPFPNYR 74
[Close]
BLAST of Ca_04779 vs. TrEMBL
Match: D7TQ27_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g02670 PE=4 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 7.912e-27
Identity = 63/81 (77.78%), Postives = 66/81 (81.48%), Query Frame = 1 
Query:    1 MASNSLSKHKLCDSTWTPKQNKLFEKALAKYDKDTPDRWINVAKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNYKST 243
            MAS S    ++    WT KQNKLFEKALA YDKDTPDRW NVAKAVG KS EEVKRHYEIL+EDLKHIESG VPIPNYKST
Sbjct:    1 MASGS----RMGSGLWTSKQNKLFEKALALYDKDTPDRWQNVAKAVGGKSAEEVKRHYEILIEDLKHIESGHVPIPNYKST 77
[Close]
BLAST of Ca_04779 vs. TrEMBL
Match: K7KAM3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.033e-26
Identity = 60/81 (74.07%), Postives = 68/81 (83.95%), Query Frame = 1 
Query:    1 MASNSLSKHKLCDSTWTPKQNKLFEKALAKYDKDTPDRWINVAKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNYKST 243
            MASNS + +K   S+WT  QNK FE ALA YD+DTPDRW N+AK VG+KS EEVKRHYEILLEDL+HIESGRVPIP+YKST
Sbjct:    1 MASNSHNNNKEIFSSWTRMQNKQFESALALYDQDTPDRWQNIAKVVGDKSAEEVKRHYEILLEDLRHIESGRVPIPSYKST 81
[Close]
BLAST of Ca_04779 vs. TrEMBL
Match: M5XVU4_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa026982mg PE=4 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.350e-26
Identity = 63/81 (77.78%), Postives = 69/81 (85.19%), Query Frame = 1 
Query:    1 MASNSLSKHKLCDSTWTPKQNKLFEKALAKYDKDTPDRWINVAKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNYKST 243
            MAS S S++    S+WTPKQNKLFEKALA YDKDT DRW NVAKAVG KSVEEVKRHYEIL++DL HIESG+VPIPNYK T
Sbjct:    1 MASLSSSRN----SSWTPKQNKLFEKALAVYDKDTQDRWHNVAKAVGGKSVEEVKRHYEILVQDLMHIESGQVPIPNYKGT 77
[Close]
BLAST of Ca_04779 vs. TrEMBL
Match: K7M5B4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.350e-26
Identity = 60/81 (74.07%), Postives = 67/81 (82.72%), Query Frame = 1 
Query:    1 MASNSLSKHKLCDSTWTPKQNKLFEKALAKYDKDTPDRWINVAKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNYKST 243
            MASNS + +K   S+WT  QNK FE ALA YD+DTPDRW N+AK VG+KS EEVKRHYEILLEDL HIESGRVPIP+YKST
Sbjct:    1 MASNSHNNNKENSSSWTRMQNKQFESALALYDQDTPDRWQNIAKVVGDKSAEEVKRHYEILLEDLSHIESGRVPIPSYKST 81
[Close]
BLAST of Ca_04779 vs. DB:Swiss
Match: RADL6_ARATH (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.634e-34
Identity = 57/80 (71.25%), Postives = 66/80 (82.50%), Query Frame = 1 
Query:    1 MASNSLSKHKLCDSTWTPKQNKLFEKALAKYDKDTPDRWINVAKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNYKS 240
            MASNS S      S WT  QNK+FE+ALA YDKDTPDRW NVAKAVG K+VEEVKRHY+IL+EDL +IE+GRVP+PNYK+
Sbjct:    1 MASNSRS----SISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRVPLPNYKT 76
[Close]
BLAST of Ca_04779 vs. DB:Swiss
Match: RADL3_ARATH (Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.311e-30
Identity = 46/66 (69.70%), Postives = 55/66 (83.33%), Query Frame = 1 
Query:   46 WTPKQNKLFEKALAKYDKDTPDRWINVAKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNYKST 243
            WT K+NKLFE+ALA YD+DTPDRW NVA+AVG KS EEV+RHYE+L+ D+  IESGR P PNY+S 
Sbjct:   12 WTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRDVNDIESGRYPHPNYRSN 77
[Close]
BLAST of Ca_04779 vs. DB:Swiss
Match: RAD_ANTMA (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.001e-29
Identity = 45/66 (68.18%), Postives = 58/66 (87.88%), Query Frame = 1 
Query:   46 WTPKQNKLFEKALAKYDKDTPDRWINVAKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNYKST 243
            W+ K+NK FE+ALA YDKDTPDRW NVA+AV  ++ EEVK+HYEIL+ED+K+IESG+VP PNY++T
Sbjct:   11 WSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKYIESGKVPFPNYRTT 76
[Close]
BLAST of Ca_04779 vs. DB:Swiss
Match: RADL1_ARATH (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.820e-29
Identity = 43/66 (65.15%), Postives = 55/66 (83.33%), Query Frame = 1 
Query:   46 WTPKQNKLFEKALAKYDKDTPDRWINVAKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNYKST 243
            WT KQNK FE+ALA YD+DTP+RW NVAK VG K+ EEVKRHYE+L++D+  IE+G VP PNY+++
Sbjct:   14 WTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINSIENGHVPFPNYRTS 79
[Close]
BLAST of Ca_04779 vs. DB:Swiss
Match: RADL5_ARATH (Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 4.205e-28
Identity = 46/63 (73.02%), Postives = 53/63 (84.13%), Query Frame = 1 
Query:   55 KQNKLFEKALAKYDKDTPDRWINVAKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNYKST 243
            KQNK+FE+ALA YDKDTPDRW NVAKAVG KS EEVKRHY+IL+EDL +IE   VP+P YK+ 
Sbjct:   15 KQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMNIEQDLVPLPKYKTV 77
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BLAST of Ca_04779 vs. DB:Swiss
Match: RADL2_ARATH (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.954e-26
Identity = 42/66 (63.64%), Postives = 54/66 (81.82%), Query Frame = 1 
Query:   46 WTPKQNKLFEKALAKYDKDTPDRWINVAKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNYKST 243
            WT KQNK FE+ALA YD+DTPDRW NVA+AVG K+ EE KR Y++L+ D++ IE+G VP P+YK+T
Sbjct:   14 WTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIESIENGHVPFPDYKTT 79
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BLAST of Ca_04779 vs. DB:Swiss
Match: RADL4_ARATH (Protein RADIALIS-like 4 OS=Arabidopsis thaliana OX=3702 GN=RL4 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.493e-25
Identity = 41/63 (65.08%), Postives = 51/63 (80.95%), Query Frame = 1 
Query:   55 KQNKLFEKALAKYDKDTPDRWINVAKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNYKST 243
            +++K FE ALAK+DKDTPDRW  +A+AVG KS EEVKRHYE+LL D+  IESGR P P Y++T
Sbjct:   14 REDKQFEMALAKFDKDTPDRWQKIARAVGGKSTEEVKRHYELLLRDVNDIESGRYPQPRYRNT 76
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BLAST of Ca_04779 vs. DB:Swiss
Match: DIV_ANTMA (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.321e-14
Identity = 31/68 (45.59%), Postives = 47/68 (69.12%), Query Frame = 1 
Query:   40 STWTPKQNKLFEKALAKYDKDTPDRWINVAKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNYKST 243
            + WT  +NK FE ALA +D++TP+RW  VA+ V  K+V +V R Y+ L +D+  IE+G VP+P Y ++
Sbjct:   24 TRWTAAENKAFENALAVFDENTPNRWERVAERVPGKTVGDVMRQYKELEDDVSSIEAGFVPVPGYSTS 91
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BLAST of Ca_04779 vs. DB:Swiss
Match: SRM1_ARATH (Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.570e-13
Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 1 
Query:   40 STWTPKQNKLFEKALAKYDKDTPDRWINVAKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNYKS 240
            S W+ + +  FE+ALA    ++ +RW  +A  V  KSVE++K HYE+L+ED+  IESG VP+P Y S
Sbjct:   10 SVWSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVEDVTRIESGCVPLPAYGS 76
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BLAST of Ca_04779 vs. DB:Swiss
Match: MYBS1_ORYSJ (Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=1 SV=1)

HSP 1 Score: 50.447 bits (119), Expect = 1.099e-7
Identity = 32/72 (44.44%), Postives = 41/72 (56.94%), Query Frame = 1 
Query:   46 WTPKQNKLFEKALAKY------DKDTPDR-WINV--AKAVGEKSVEEVKRHYEILLEDLKHIESGRVPIPNY 234
            WT + +K FE ALA        D   PD  W     A   G +S EEV+RHYE L+ED+  I++GRVP+P Y
Sbjct:   18 WTREDDKAFENALAACAAPPPADGGAPDDDWFAALAASVPGARSAEEVRRHYEALVEDVAAIDAGRVPLPRY 89
The following BLAST results are available for this feature:
BLAST of Ca_04779 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 8
Match NameE-valueIdentityDescription
RADL6_ARATH4.313e-2571.25Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN... [more]
RADL5_ARATH2.141e-2467.50Protein RADIALIS-like 5 OS=Arabidopsis thaliana GN... [more]
RADL3_ARATH6.228e-2465.00Protein RADIALIS-like 3 OS=Arabidopsis thaliana GN... [more]
RADL1_ARATH1.534e-2259.26Protein RADIALIS-like 1 OS=Arabidopsis thaliana GN... [more]
RAD_ANTMA2.003e-2268.18Transcription factor RADIALIS OS=Antirrhinum majus... [more]
RADL4_ARATH1.299e-2160.49Protein RADIALIS-like 4 OS=Arabidopsis thaliana GN... [more]
RADL2_ARATH3.778e-2158.02Protein RADIALIS-like 2 OS=Arabidopsis thaliana GN... [more]
DIV_ANTMA9.328e-1246.97Transcription factor DIVARICATA OS=Antirrhinum maj... [more]
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BLAST of Ca_04779 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7J732_MEDTR3.543e-3590.12DnaJ homolog subfamily C member OS=Medicago trunca... [more]
I1LJC8_SOYBN2.808e-3283.95Uncharacterized protein OS=Glycine max PE=4 SV=2[more]
K7LSY9_SOYBN3.667e-3283.95Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
K7KHJ6_SOYBN9.032e-3180.25Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
B9MXN3_POPTR6.473e-2975.31Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7SPC6_VITVI6.058e-2775.68Putative uncharacterized protein OS=Vitis vinifera... [more]
D7TQ27_VITVI7.912e-2777.78Putative uncharacterized protein OS=Vitis vinifera... [more]
K7KAM3_SOYBN1.033e-2674.07Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
M5XVU4_PRUPE1.350e-2677.78Uncharacterized protein (Fragment) OS=Prunus persi... [more]
K7M5B4_SOYBN1.350e-2674.07Uncharacterized protein OS=Glycine max PE=4 SV=1[more]

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BLAST of Ca_04779 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RADL6_ARATH4.634e-3471.25Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX... [more]
RADL3_ARATH8.311e-3069.70Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX... [more]
RAD_ANTMA1.001e-2968.18Transcription factor RADIALIS OS=Antirrhinum majus... [more]
RADL1_ARATH3.820e-2965.15Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX... [more]
RADL5_ARATH4.205e-2873.02Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX... [more]
RADL2_ARATH1.954e-2663.64Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX... [more]
RADL4_ARATH4.493e-2565.08Protein RADIALIS-like 4 OS=Arabidopsis thaliana OX... [more]
DIV_ANTMA6.321e-1445.59Transcription factor DIVARICATA OS=Antirrhinum maj... [more]
SRM1_ARATH2.570e-1346.27Transcription factor SRM1 OS=Arabidopsis thaliana ... [more]
MYBS1_ORYSJ1.099e-744.44Transcription factor MYBS1 OS=Oryza sativa subsp. ... [more]
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InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 15..58
score: 1.1
IPR001005SANT/Myb domainSMARTSM00717SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bincoord: 12..64
score: 6.7
IPR009057Homeodomain-likeSUPERFAMILY46689Homeodomain-likecoord: 15..69
score: 1
IPR017884SANT domainPROFILEPS51293SANTcoord: 11..66
score: 9
NoneNo IPR availablePANTHERPTHR25040FAMILY NOT NAMEDcoord: 13..79
score: 1.1
NoneNo IPR availablePANTHERPTHR25040:SF164 MYB FAMILY TRANSCRIPTION FACTORcoord: 13..79
score: 1.1

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_04779_v1.0_kabuli ID=Ca_04779_v1.0_kabuli; Name=Ca_04779; organism=Cicer arietinum; type=mRNA; length=246bp
ATGGCCTCAAATTCCTTAAGCAAACACAAACTTTGTGATTCAACTTGGAC
TCCTAAACAGAACAAGTTGTTTGAAAAGGCACTTGCAAAATATGACAAGG
ATACACCTGACCGTTGGATTAATGTAGCAAAAGCAGTTGGTGAAAAATCA
GTTGAGGAAGTTAAGAGACATTATGAGATACTCTTGGAGGATCTCAAACA
CATTGAGTCTGGTCGTGTTCCAATTCCAAACTATAAGTCCACGTGA
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protein sequence of Ca_04779_v1.0_kabuli

>Ca_04779_v1.0_kabuli ID=Ca_04779_v1.0_kabuli; Name=Ca_04779_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=81bp
MASNSLSKHKLCDSTWTPKQNKLFEKALAKYDKDTPDRWINVAKAVGEKS
VEEVKRHYEILLEDLKHIESGRVPIPNYKST
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mRNA from alignment at Ca5:30829269..30829514+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_04779_v1.0_kabuli ID=Ca_04779_v1.0_kabuli; Name=Ca_04779; organism=Cicer arietinum; type=mRNA; length=246bp; location=Sequence derived from: Ca5:30829269..30829514+ (Cicer arietinum
ATGGCCTCAAATTCCTTAAGCAAACACAAACTTTGTGATTCAACTTGGAC
TCCTAAACAGAACAAGTTGTTTGAAAAGGCACTTGCAAAATATGACAAGG
ATACACCTGACCGTTGGATTAATGTAGCAAAAGCAGTTGGTGAAAAATCA
GTTGAGGAAGTTAAGAGACATTATGAGATACTCTTGGAGGATCTCAAACA
CATTGAGTCTGGTCGTGTTCCAATTCCAAACTATAAGTCCACGTGA
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Coding sequence (CDS) from alignment at Ca5:30829269..30829514+

>Ca_04779_v1.0_kabuli ID=Ca_04779_v1.0_kabuli; Name=Ca_04779; organism=Cicer arietinum; type=CDS; length=246bp; location=Sequence derived from: Ca5:30829269..30829514+ (Cicer arietinum
ATGGCCTCAAATTCCTTAAGCAAACACAAACTTTGTGATTCAACTTGGAC
TCCTAAACAGAACAAGTTGTTTGAAAAGGCACTTGCAAAATATGACAAGG
ATACACCTGACCGTTGGATTAATGTAGCAAAAGCAGTTGGTGAAAAATCA
GTTGAGGAAGTTAAGAGACATTATGAGATACTCTTGGAGGATCTCAAACA
CATTGAGTCTGGTCGTGTTCCAATTCCAAACTATAAGTCCACGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeodomain-like_sf
IPR017884SANT_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005515protein binding