Ca_04813, Ca_04813_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview


Name	Ca_04813
Unique Name	Ca_04813_v1.0_kabuli
Type	mRNA
Organism	Cicer arietinum (chickpea)
Sequence length	423

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Ca5	chromosome	Ca5:31117641..31118063 -	Cicer arietinum CDC Frontier genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum CDC Frontier genome v1.0	2013-01-01
InterProScan analysis for kabuli C. arietinum unigenes	2013-10-24
Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot	2013-10-24
Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL	2013-10-24
BLAST: C. arietinum CDC Frontier (kabuli), Swissprot	2019-05-21

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
capsR381	Pisum sativum Cameor genome v1a	Pisum sativum
capsR384	Pisum sativum Cameor genome v1a	Pisum sativum
cavuR444	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
capvR446	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
capvR454	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
capvR523	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
caccR0708	Cajanus cajan Asha genome v1.0	Cajanus cajan
ascaL041	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
ascaL201	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
ascaL689	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
cazwsR330	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
cazwsR353	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
catifR364	Vicia faba cv. Tiffany genome v1.0	Vicia faba
catifR401	Vicia faba cv. Tiffany genome v1.0	Vicia faba
cavfhR368	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
catifR430	Vicia faba cv. Tiffany genome v1.0	Vicia faba
cavfhR403	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
cavfhR433	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
cavrvR419	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
cavrvR472	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
cavssR408	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
cavssR438	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
cavuaR357	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
cavuaR413	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
cacanR189	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
cacanR214	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
cacarR393		Cicer arietinum
cacarR427		Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
rna-XM_027334277.1	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Ca_04813-CDS1	Ca_04813-CDS1	Cicer arietinum	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Ca_04813_v1.0_kabuli	Ca_04813_v1.0_kabuli	Cicer arietinum	polypeptide

Homology

[Close]

BLAST of Ca_04813 vs. SwissProt
Match: IF415_TOBAC (Eukaryotic initiation factor 4A-15 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 2.340e-42
Identity = 82/99 (82.83%), Postives = 89/99 (89.90%), Query Frame = 1

Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +G   E SQFDA  +DTKMNELL++DGQ+FF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGAAPEGSQFDARQFDTKMNELLSADGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100

[Close]

BLAST of Ca_04813 vs. SwissProt
Match: IF4A8_TOBAC (Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 5.763e-41
Identity = 79/97 (81.44%), Postives = 88/97 (90.72%), Query Frame = 1

Query:  130 LTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            L  + +QFDA  YD+KMN+LLA+DG++FF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    4 LAPDGAQFDARQYDSKMNDLLAADGKDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100

[Close]

BLAST of Ca_04813 vs. SwissProt
Match: IF4A7_TOBAC (Eukaryotic initiation factor 4A-7 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.677e-40
Identity = 79/99 (79.80%), Postives = 86/99 (86.87%), Query Frame = 1

Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDA  YD KM ELL ++ +EFF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC G+LQ
Sbjct:    2 AGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100

[Close]

BLAST of Ca_04813 vs. SwissProt
Match: IF414_TOBAC (Eukaryotic initiation factor 4A-14 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.677e-40
Identity = 79/99 (79.80%), Postives = 86/99 (86.87%), Query Frame = 1

Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDA  YD KM ELL ++ +EFF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC G+LQ
Sbjct:    2 AGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100

[Close]

BLAST of Ca_04813 vs. SwissProt
Match: IF413_TOBAC (Eukaryotic initiation factor 4A-13 (Fragment) OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.677e-40
Identity = 79/99 (79.80%), Postives = 86/99 (86.87%), Query Frame = 1

Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDA  YD KM ELL ++ +EFF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC G+LQ
Sbjct:    2 AGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100

[Close]

BLAST of Ca_04813 vs. SwissProt
Match: IF411_TOBAC (Eukaryotic initiation factor 4A-11 OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.677e-40
Identity = 80/99 (80.81%), Postives = 86/99 (86.87%), Query Frame = 1

Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDA  YD KM ELL ++ QEFF SYDEV++SFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGLAPEGSQFDARQYDAKMTELLGTEQQEFFTSYDEVYESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100

[Close]

BLAST of Ca_04813 vs. SwissProt
Match: IF410_TOBAC (Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.677e-40
Identity = 79/99 (79.80%), Postives = 86/99 (86.87%), Query Frame = 1

Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDA  YD KM ELL ++ +EFF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC G+LQ
Sbjct:    2 AGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100

[Close]

BLAST of Ca_04813 vs. SwissProt
Match: IF4A9_TOBAC (Eukaryotic initiation factor 4A-9 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.419e-39
Identity = 78/99 (78.79%), Postives = 86/99 (86.87%), Query Frame = 1

Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +G   E SQFDA  YD+KM ELL ++GQ+FF SYDEV+ SFDAMGL+EN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGAAPEGSQFDARQYDSKMTELLNAEGQDFFTSYDEVYHSFDAMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100

[Close]

BLAST of Ca_04813 vs. SwissProt
Match: IF4A2_NICPL (Eukaryotic initiation factor 4A-2 OS=Nicotiana plumbaginifolia PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 2.421e-39
Identity = 77/99 (77.78%), Postives = 85/99 (85.86%), Query Frame = 1

Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +G   E SQFDA  +D KM ELL ++ +EFF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC G+LQ
Sbjct:    2 AGSAPEGSQFDARQFDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100

[Close]

BLAST of Ca_04813 vs. SwissProt
Match: IF4A1_ORYSJ (Eukaryotic initiation factor 4A-1 OS=Oryza sativa subsp. japonica GN=Os06g0701100 PE=2 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 2.421e-39
Identity = 79/100 (79.00%), Postives = 86/100 (86.00%), Query Frame = 1

Query:  124 SGLTLERSQFDANHYDTKMNELL-ASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +G+  E SQFDA HYD+KM ELL   + +EFF SYDEVH+SFD MGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGMAPEGSQFDAKHYDSKMQELLNQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 101

[Close]

BLAST of Ca_04813 vs. TrEMBL
Match: G7LI94_MEDTR (Eukaryotic initiation factor 4A OS=Medicago truncatula GN=MTR_8g018400 PE=4 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 9.234e-44
Identity = 88/99 (88.89%), Postives = 92/99 (92.93%), Query Frame = 1

Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDANHYD+KMNELLA+DGQEFF SYDEV+DSFDAMGLQEN LRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGLAPEGSQFDANHYDSKMNELLATDGQEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100

[Close]

BLAST of Ca_04813 vs. TrEMBL
Match: I1L1K7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.474e-41
Identity = 84/99 (84.85%), Postives = 89/99 (89.90%), Query Frame = 1

Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +G+  E SQFDA  YDTKMNELL SDGQ+FF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGIAPEGSQFDARQYDTKMNELLTSDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100

[Close]

BLAST of Ca_04813 vs. TrEMBL
Match: C6T8X3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.925e-41
Identity = 84/99 (84.85%), Postives = 89/99 (89.90%), Query Frame = 1

Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDA  YDTKMNELL SDGQ+FF SYDEV+DSFDAMGLQ+N LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGLAPEGSQFDARQYDTKMNELLTSDGQDFFTSYDEVYDSFDAMGLQDNLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100

[Close]

BLAST of Ca_04813 vs. TrEMBL
Match: E5GB87_CUCME (Helicase OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 3.284e-41
Identity = 83/99 (83.84%), Postives = 90/99 (90.91%), Query Frame = 1

Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDA  YDTKMNELL++DGQ+FF SYDEV+DSFD+MGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGLAPEGSQFDARQYDTKMNELLSADGQDFFTSYDEVYDSFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100

[Close]

BLAST of Ca_04813 vs. TrEMBL
Match: Q7X9E7_PHAVU (Translation initiation factor 4A (Fragment) OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 7.316e-41
Identity = 82/99 (82.83%), Postives = 90/99 (90.91%), Query Frame = 1

Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFD  HYD+KM+ELL++DGQEFF SYDEV+DSFDA+GLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGLAPEGSQFDGRHYDSKMSELLSADGQEFFTSYDEVYDSFDAIGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100

[Close]

BLAST of Ca_04813 vs. TrEMBL
Match: M0SW70_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 1.248e-40
Identity = 83/99 (83.84%), Postives = 88/99 (88.89%), Query Frame = 1

Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +G+  E SQFDA  YD KMNELL+ DGQ+FFASYDEV DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:   69 AGVAPEGSQFDARQYDAKMNELLSQDGQDFFASYDEVFDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCAGILQ 167

[Close]

BLAST of Ca_04813 vs. TrEMBL
Match: I1KUR0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 1.248e-40
Identity = 83/108 (76.85%), Postives = 92/108 (85.19%), Query Frame = 1

Query:   97 IHVVFVSKASGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            + V+  +  +GL  E +QFD   YD KM+ELL++DGQEFF SYDEV+DSFDAMGLQEN LRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    1 MEVLLFAVMAGLAPEGTQFDGRQYDAKMSELLSTDGQEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 108

[Close]

BLAST of Ca_04813 vs. TrEMBL
Match: M0U641_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.630e-40
Identity = 82/99 (82.83%), Postives = 88/99 (88.89%), Query Frame = 1

Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +G+  E SQFDA  YD KMNEL++ DGQ+FFASYDEV DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGMAPEGSQFDARQYDAKMNELISQDGQDFFASYDEVFDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCAGILQ 100

[Close]

BLAST of Ca_04813 vs. TrEMBL
Match: C6TJ25_SOYBN (Putative uncharacterized protein OS=Glycine max PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.630e-40
Identity = 82/99 (82.83%), Postives = 90/99 (90.91%), Query Frame = 1

Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDA  YD+KM++LL+SDGQ+FF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGLAPEGSQFDARQYDSKMSDLLSSDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100

[Close]

BLAST of Ca_04813 vs. TrEMBL
Match: C6TI26_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 2.780e-40
Identity = 82/99 (82.83%), Postives = 88/99 (88.89%), Query Frame = 1

Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E +QFD   YD KM+ELL++DGQEFF SYDEV+DSFDAMGLQEN LRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGLAPEGTQFDGRQYDAKMSELLSTDGQEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100

[Close]

BLAST of Ca_04813 vs. DB:Swiss
Match: IF415_TOBAC (Eukaryotic initiation factor 4A-15 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 5.046e-53
Identity = 82/99 (82.83%), Postives = 89/99 (89.90%), Query Frame = 1

Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +G   E SQFDA  +DTKMNELL++DGQ+FF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGAAPEGSQFDARQFDTKMNELLSADGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100

[Close]

BLAST of Ca_04813 vs. DB:Swiss
Match: IF4A8_TOBAC (Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.816e-51
Identity = 78/92 (84.78%), Postives = 86/92 (93.48%), Query Frame = 1

Query:  145 SQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +QFDA  YD+KMN+LLA+DG++FF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    9 AQFDARQYDSKMNDLLAADGKDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100

[Close]

BLAST of Ca_04813 vs. DB:Swiss
Match: IF413_TOBAC (Eukaryotic initiation factor 4A-13 (Fragment) OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.530e-51
Identity = 79/99 (79.80%), Postives = 86/99 (86.87%), Query Frame = 1

Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDA  YD KM ELL ++ +EFF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC G+LQ
Sbjct:    2 AGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100

[Close]

BLAST of Ca_04813 vs. DB:Swiss
Match: IF410_TOBAC (Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 9.936e-51
Identity = 79/99 (79.80%), Postives = 86/99 (86.87%), Query Frame = 1

Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDA  YD KM ELL ++ +EFF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC G+LQ
Sbjct:    2 AGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100

[Close]

BLAST of Ca_04813 vs. DB:Swiss
Match: IF4A7_TOBAC (Eukaryotic initiation factor 4A-7 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.037e-50
Identity = 79/99 (79.80%), Postives = 86/99 (86.87%), Query Frame = 1

Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDA  YD KM ELL ++ +EFF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC G+LQ
Sbjct:    2 AGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100

[Close]

BLAST of Ca_04813 vs. DB:Swiss
Match: IF414_TOBAC (Eukaryotic initiation factor 4A-14 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.071e-50
Identity = 79/99 (79.80%), Postives = 86/99 (86.87%), Query Frame = 1

Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDA  YD KM ELL ++ +EFF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC G+LQ
Sbjct:    2 AGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100

[Close]

BLAST of Ca_04813 vs. DB:Swiss
Match: IF411_TOBAC (Eukaryotic initiation factor 4A-11 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.094e-50
Identity = 80/99 (80.81%), Postives = 86/99 (86.87%), Query Frame = 1

Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDA  YD KM ELL ++ QEFF SYDEV++SFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGLAPEGSQFDARQYDAKMTELLGTEQQEFFTSYDEVYESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100

[Close]

BLAST of Ca_04813 vs. DB:Swiss
Match: IF4A9_TOBAC (Eukaryotic initiation factor 4A-9 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.293e-49
Identity = 78/99 (78.79%), Postives = 86/99 (86.87%), Query Frame = 1

Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +G   E SQFDA  YD+KM ELL ++GQ+FF SYDEV+ SFDAMGL+EN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGAAPEGSQFDARQYDSKMTELLNAEGQDFFTSYDEVYHSFDAMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100

[Close]

BLAST of Ca_04813 vs. DB:Swiss
Match: IF4A1_ORYSJ (Eukaryotic initiation factor 4A-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0701100 PE=2 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 3.225e-49
Identity = 79/100 (79.00%), Postives = 86/100 (86.00%), Query Frame = 1

Query:  124 SGLTLERSQFDANHYDTKMNELLAS-DGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +G+  E SQFDA HYD+KM ELL   + +EFF SYDEVH+SFD MGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGMAPEGSQFDAKHYDSKMQELLNQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 101

[Close]

BLAST of Ca_04813 vs. DB:Swiss
Match: IF4A2_NICPL (Eukaryotic initiation factor 4A-2 OS=Nicotiana plumbaginifolia OX=4092 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.384e-49
Identity = 77/99 (77.78%), Postives = 85/99 (85.86%), Query Frame = 1

Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +G   E SQFDA  +D KM ELL ++ +EFF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC G+LQ
Sbjct:    2 AGSAPEGSQFDARQFDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100

The following BLAST results are available for this feature:

BLAST of Ca_04813 vs. SwissProt
BLAST of Ca_04813 vs. TrEMBL
BLAST of Ca_04813 vs. DB:Swiss

BLAST of Ca_04813 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 25

Position :

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Match Name	E-value	Identity	Description
IF415_TOBAC	2.340e-42	82.83	Eukaryotic initiation factor 4A-15 OS=Nicotiana ta...	[more]
IF4A8_TOBAC	5.763e-41	81.44	Eukaryotic initiation factor 4A-8 OS=Nicotiana tab...	[more]
IF4A7_TOBAC	1.677e-40	79.80	Eukaryotic initiation factor 4A-7 OS=Nicotiana tab...	[more]
IF414_TOBAC	1.677e-40	79.80	Eukaryotic initiation factor 4A-14 OS=Nicotiana ta...	[more]
IF413_TOBAC	1.677e-40	79.80	Eukaryotic initiation factor 4A-13 (Fragment) OS=N...	[more]
IF411_TOBAC	1.677e-40	80.81	Eukaryotic initiation factor 4A-11 OS=Nicotiana ta...	[more]
IF410_TOBAC	1.677e-40	79.80	Eukaryotic initiation factor 4A-10 OS=Nicotiana ta...	[more]
IF4A9_TOBAC	1.419e-39	78.79	Eukaryotic initiation factor 4A-9 OS=Nicotiana tab...	[more]
IF4A2_NICPL	2.421e-39	77.78	Eukaryotic initiation factor 4A-2 OS=Nicotiana plu...	[more]
IF4A1_ORYSJ	2.421e-39	79.00	Eukaryotic initiation factor 4A-1 OS=Oryza sativa ...	[more]

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BLAST of Ca_04813 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25

Position :

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Match Name	E-value	Identity	Description
G7LI94_MEDTR	9.234e-44	88.89	Eukaryotic initiation factor 4A OS=Medicago trunca...	[more]
I1L1K7_SOYBN	1.474e-41	84.85	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
C6T8X3_SOYBN	1.925e-41	84.85	Putative uncharacterized protein OS=Glycine max PE...	[more]
E5GB87_CUCME	3.284e-41	83.84	Helicase OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
Q7X9E7_PHAVU	7.316e-41	82.83	Translation initiation factor 4A (Fragment) OS=Pha...	[more]
M0SW70_MUSAM	1.248e-40	83.84	Uncharacterized protein OS=Musa acuminata subsp. m...	[more]
I1KUR0_SOYBN	1.248e-40	76.85	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
M0U641_MUSAM	1.630e-40	82.83	Uncharacterized protein OS=Musa acuminata subsp. m...	[more]
C6TJ25_SOYBN	1.630e-40	82.83	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6TI26_SOYBN	2.780e-40	82.83	Putative uncharacterized protein OS=Glycine max PE...	[more]

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BLAST of Ca_04813 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
IF415_TOBAC	5.046e-53	82.83	Eukaryotic initiation factor 4A-15 OS=Nicotiana ta...	[more]
IF4A8_TOBAC	1.816e-51	84.78	Eukaryotic initiation factor 4A-8 OS=Nicotiana tab...	[more]
IF413_TOBAC	2.530e-51	79.80	Eukaryotic initiation factor 4A-13 (Fragment) OS=N...	[more]
IF410_TOBAC	9.936e-51	79.80	Eukaryotic initiation factor 4A-10 OS=Nicotiana ta...	[more]
IF4A7_TOBAC	1.037e-50	79.80	Eukaryotic initiation factor 4A-7 OS=Nicotiana tab...	[more]
IF414_TOBAC	1.071e-50	79.80	Eukaryotic initiation factor 4A-14 OS=Nicotiana ta...	[more]
IF411_TOBAC	1.094e-50	80.81	Eukaryotic initiation factor 4A-11 OS=Nicotiana ta...	[more]
IF4A9_TOBAC	2.293e-49	78.79	Eukaryotic initiation factor 4A-9 OS=Nicotiana tab...	[more]
IF4A1_ORYSJ	3.225e-49	79.00	Eukaryotic initiation factor 4A-1 OS=Oryza sativa ...	[more]
IF4A2_NICPL	5.384e-49	77.78	Eukaryotic initiation factor 4A-2 OS=Nicotiana plu...	[more]

InterPro

Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014014	RNA helicase, DEAD-box type, Q motif	PROFILE	PS51195	Q_MOTIF	coord: 80..108 score: 9
None	No IPR available	GENE3D	3.40.50.300	no description	coord: 76..140 score: 2.4
None	No IPR available	GENE3D	3.50.30.30	no description	coord: 3..52 score: 8
None	No IPR available	PANTHER	PTHR24031	FAMILY NOT NAMED	coord: 46..140 score: 1.7
None	No IPR available	PANTHER	PTHR24031:SF2	SUBFAMILY NOT NAMED	coord: 46..140 score: 1.7
None	No IPR available	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 80..140 score: 7.4
None	No IPR available	SEG	seg	seg	coord: 34..46 score

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Ca5:31117641..31118063-
coding sequence from alignment at Ca5:31117641..31118063-

mRNA sequence

>Ca_04813_v1.0_kabuli ID=Ca_04813_v1.0_kabuli; Name=Ca_04813; organism=Cicer arietinum; type=mRNA; length=423bp
ATGACACAAAATGCGGGCTACACAGCTGTAATTGTCTATGACAATGAAGA
TGGTGGCGTCCTGGTTGCAATGGCAGGAAATTCTGCTGGTATAAGAATAC
ATGTTGTATTTGTATCAAAAGCTTCGGGTTTGACTCTAGAAAGATCACAA
TTTGATGCTAATCATTATGACACTAAGATGAATGAACTGCTTGCCAGTGA
TGGGCAAGAATTCTTCGCCTCATATGATGAAGTCCATGATAGCTTTGATG
CAATGGGGCTGCAAGAAAATCCTCTGCGAGGCATATATGCTTACGGTTTT
GAGAGGCCTTCTGCAATCCAGCAAAGAGGAATTGTTCCTTTCTGCAAAGG
TCTGGATGTGATTCAACAGGCTCAATCAGGAACTGGGAAGACAACAACAT
TTTGTTTTGGAATTTTGCAGTAG

protein sequence of Ca_04813_v1.0_kabuli

>Ca_04813_v1.0_kabuli ID=Ca_04813_v1.0_kabuli; Name=Ca_04813_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=140bp
MTQNAGYTAVIVYDNEDGGVLVAMAGNSAGIRIHVVFVSKASGLTLERSQ
FDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGF
ERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ

mRNA from alignment at Ca5:31117641..31118063-

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ca_04813_v1.0_kabuli ID=Ca_04813_v1.0_kabuli; Name=Ca_04813; organism=Cicer arietinum; type=mRNA; length=423bp; location=Sequence derived from: Ca5:31117641..31118063- (Cicer arietinum
ATGACACAAAATGCGGGCTACACAGCTGTAATTGTCTATGACAATGAAGA
TGGTGGCGTCCTGGTTGCAATGGCAGGAAATTCTGCTGGTATAAGAATAC
ATGTTGTATTTGTATCAAAAGCTTCGGGTTTGACTCTAGAAAGATCACAA
TTTGATGCTAATCATTATGACACTAAGATGAATGAACTGCTTGCCAGTGA
TGGGCAAGAATTCTTCGCCTCATATGATGAAGTCCATGATAGCTTTGATG
CAATGGGGCTGCAAGAAAATCCTCTGCGAGGCATATATGCTTACGGTTTT
GAGAGGCCTTCTGCAATCCAGCAAAGAGGAATTGTTCCTTTCTGCAAAGG
TCTGGATGTGATTCAACAGGCTCAATCAGGAACTGGGAAGACAACAACAT
TTTGTTTTGGAATTTTGCAGTAG

Coding sequence (CDS) from alignment at Ca5:31117641..31118063-

>Ca_04813_v1.0_kabuli ID=Ca_04813_v1.0_kabuli; Name=Ca_04813; organism=Cicer arietinum; type=CDS; length=423bp; location=Sequence derived from: Ca5:31117641..31118063- (Cicer arietinum
ATGACACAAAATGCGGGCTACACAGCTGTAATTGTCTATGACAATGAAGA
TGGTGGCGTCCTGGTTGCAATGGCAGGAAATTCTGCTGGTATAAGAATAC
ATGTTGTATTTGTATCAAAAGCTTCGGGTTTGACTCTAGAAAGATCACAA
TTTGATGCTAATCATTATGACACTAAGATGAATGAACTGCTTGCCAGTGA
TGGGCAAGAATTCTTCGCCTCATATGATGAAGTCCATGATAGCTTTGATG
CAATGGGGCTGCAAGAAAATCCTCTGCGAGGCATATATGCTTACGGTTTT
GAGAGGCCTTCTGCAATCCAGCAAAGAGGAATTGTTCCTTTCTGCAAAGG
TCTGGATGTGATTCAACAGGCTCAATCAGGAACTGGGAAGACAACAACAT
TTTGTTTTGGAATTTTGCAGTAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR014014	RNA_helicase_DEAD_Q_motif

Search form

Ca_04813, Ca_04813_v1.0_kabuli (mRNA) Cicer arietinum

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