Ca_04813, Ca_04813_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_04813
Unique NameCa_04813_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length423
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca5chromosomeCa5:31117641..31118063 -Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR381Pisum sativum Cameor genome v1aPisum sativum
capsR384Pisum sativum Cameor genome v1aPisum sativum
cavuR444Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR446Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR454Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR523Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0708Cajanus cajan Asha genome v1.0Cajanus cajan
ascaL041Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL201Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL689Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR330Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR353Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR364Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR401Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR368Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
catifR430Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR403Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR433Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR419Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR472Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR408Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR438Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR357Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR413Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR189Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR214Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacarR393Cicer arietinum
cacarR427Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_027334277.1Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_04813-CDS1Ca_04813-CDS1Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_04813_v1.0_kabuliCa_04813_v1.0_kabuliCicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_04813 vs. SwissProt
Match: IF415_TOBAC (Eukaryotic initiation factor 4A-15 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 2.340e-42
Identity = 82/99 (82.83%), Postives = 89/99 (89.90%), Query Frame = 1 
Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +G   E SQFDA  +DTKMNELL++DGQ+FF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGAAPEGSQFDARQFDTKMNELLSADGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
[Close]
BLAST of Ca_04813 vs. SwissProt
Match: IF4A8_TOBAC (Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 5.763e-41
Identity = 79/97 (81.44%), Postives = 88/97 (90.72%), Query Frame = 1 
Query:  130 LTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            L  + +QFDA  YD+KMN+LLA+DG++FF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    4 LAPDGAQFDARQYDSKMNDLLAADGKDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
[Close]
BLAST of Ca_04813 vs. SwissProt
Match: IF4A7_TOBAC (Eukaryotic initiation factor 4A-7 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.677e-40
Identity = 79/99 (79.80%), Postives = 86/99 (86.87%), Query Frame = 1 
Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDA  YD KM ELL ++ +EFF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC G+LQ
Sbjct:    2 AGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100
[Close]
BLAST of Ca_04813 vs. SwissProt
Match: IF414_TOBAC (Eukaryotic initiation factor 4A-14 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.677e-40
Identity = 79/99 (79.80%), Postives = 86/99 (86.87%), Query Frame = 1 
Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDA  YD KM ELL ++ +EFF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC G+LQ
Sbjct:    2 AGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100
[Close]
BLAST of Ca_04813 vs. SwissProt
Match: IF413_TOBAC (Eukaryotic initiation factor 4A-13 (Fragment) OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.677e-40
Identity = 79/99 (79.80%), Postives = 86/99 (86.87%), Query Frame = 1 
Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDA  YD KM ELL ++ +EFF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC G+LQ
Sbjct:    2 AGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100
[Close]
BLAST of Ca_04813 vs. SwissProt
Match: IF411_TOBAC (Eukaryotic initiation factor 4A-11 OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.677e-40
Identity = 80/99 (80.81%), Postives = 86/99 (86.87%), Query Frame = 1 
Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDA  YD KM ELL ++ QEFF SYDEV++SFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGLAPEGSQFDARQYDAKMTELLGTEQQEFFTSYDEVYESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
[Close]
BLAST of Ca_04813 vs. SwissProt
Match: IF410_TOBAC (Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.677e-40
Identity = 79/99 (79.80%), Postives = 86/99 (86.87%), Query Frame = 1 
Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDA  YD KM ELL ++ +EFF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC G+LQ
Sbjct:    2 AGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100
[Close]
BLAST of Ca_04813 vs. SwissProt
Match: IF4A9_TOBAC (Eukaryotic initiation factor 4A-9 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.419e-39
Identity = 78/99 (78.79%), Postives = 86/99 (86.87%), Query Frame = 1 
Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +G   E SQFDA  YD+KM ELL ++GQ+FF SYDEV+ SFDAMGL+EN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGAAPEGSQFDARQYDSKMTELLNAEGQDFFTSYDEVYHSFDAMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
[Close]
BLAST of Ca_04813 vs. SwissProt
Match: IF4A2_NICPL (Eukaryotic initiation factor 4A-2 OS=Nicotiana plumbaginifolia PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 2.421e-39
Identity = 77/99 (77.78%), Postives = 85/99 (85.86%), Query Frame = 1 
Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +G   E SQFDA  +D KM ELL ++ +EFF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC G+LQ
Sbjct:    2 AGSAPEGSQFDARQFDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100
[Close]
BLAST of Ca_04813 vs. SwissProt
Match: IF4A1_ORYSJ (Eukaryotic initiation factor 4A-1 OS=Oryza sativa subsp. japonica GN=Os06g0701100 PE=2 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 2.421e-39
Identity = 79/100 (79.00%), Postives = 86/100 (86.00%), Query Frame = 1 
Query:  124 SGLTLERSQFDANHYDTKMNELL-ASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +G+  E SQFDA HYD+KM ELL   + +EFF SYDEVH+SFD MGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGMAPEGSQFDAKHYDSKMQELLNQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 101
[Close]
BLAST of Ca_04813 vs. TrEMBL
Match: G7LI94_MEDTR (Eukaryotic initiation factor 4A OS=Medicago truncatula GN=MTR_8g018400 PE=4 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 9.234e-44
Identity = 88/99 (88.89%), Postives = 92/99 (92.93%), Query Frame = 1 
Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDANHYD+KMNELLA+DGQEFF SYDEV+DSFDAMGLQEN LRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGLAPEGSQFDANHYDSKMNELLATDGQEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
[Close]
BLAST of Ca_04813 vs. TrEMBL
Match: I1L1K7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.474e-41
Identity = 84/99 (84.85%), Postives = 89/99 (89.90%), Query Frame = 1 
Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +G+  E SQFDA  YDTKMNELL SDGQ+FF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGIAPEGSQFDARQYDTKMNELLTSDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
[Close]
BLAST of Ca_04813 vs. TrEMBL
Match: C6T8X3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.925e-41
Identity = 84/99 (84.85%), Postives = 89/99 (89.90%), Query Frame = 1 
Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDA  YDTKMNELL SDGQ+FF SYDEV+DSFDAMGLQ+N LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGLAPEGSQFDARQYDTKMNELLTSDGQDFFTSYDEVYDSFDAMGLQDNLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
[Close]
BLAST of Ca_04813 vs. TrEMBL
Match: E5GB87_CUCME (Helicase OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 3.284e-41
Identity = 83/99 (83.84%), Postives = 90/99 (90.91%), Query Frame = 1 
Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDA  YDTKMNELL++DGQ+FF SYDEV+DSFD+MGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGLAPEGSQFDARQYDTKMNELLSADGQDFFTSYDEVYDSFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
[Close]
BLAST of Ca_04813 vs. TrEMBL
Match: Q7X9E7_PHAVU (Translation initiation factor 4A (Fragment) OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 7.316e-41
Identity = 82/99 (82.83%), Postives = 90/99 (90.91%), Query Frame = 1 
Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFD  HYD+KM+ELL++DGQEFF SYDEV+DSFDA+GLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGLAPEGSQFDGRHYDSKMSELLSADGQEFFTSYDEVYDSFDAIGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
[Close]
BLAST of Ca_04813 vs. TrEMBL
Match: M0SW70_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 1.248e-40
Identity = 83/99 (83.84%), Postives = 88/99 (88.89%), Query Frame = 1 
Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +G+  E SQFDA  YD KMNELL+ DGQ+FFASYDEV DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:   69 AGVAPEGSQFDARQYDAKMNELLSQDGQDFFASYDEVFDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCAGILQ 167
[Close]
BLAST of Ca_04813 vs. TrEMBL
Match: I1KUR0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 1.248e-40
Identity = 83/108 (76.85%), Postives = 92/108 (85.19%), Query Frame = 1 
Query:   97 IHVVFVSKASGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            + V+  +  +GL  E +QFD   YD KM+ELL++DGQEFF SYDEV+DSFDAMGLQEN LRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    1 MEVLLFAVMAGLAPEGTQFDGRQYDAKMSELLSTDGQEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 108
[Close]
BLAST of Ca_04813 vs. TrEMBL
Match: M0U641_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.630e-40
Identity = 82/99 (82.83%), Postives = 88/99 (88.89%), Query Frame = 1 
Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +G+  E SQFDA  YD KMNEL++ DGQ+FFASYDEV DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGMAPEGSQFDARQYDAKMNELISQDGQDFFASYDEVFDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCAGILQ 100
[Close]
BLAST of Ca_04813 vs. TrEMBL
Match: C6TJ25_SOYBN (Putative uncharacterized protein OS=Glycine max PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.630e-40
Identity = 82/99 (82.83%), Postives = 90/99 (90.91%), Query Frame = 1 
Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDA  YD+KM++LL+SDGQ+FF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGLAPEGSQFDARQYDSKMSDLLSSDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
[Close]
BLAST of Ca_04813 vs. TrEMBL
Match: C6TI26_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 2.780e-40
Identity = 82/99 (82.83%), Postives = 88/99 (88.89%), Query Frame = 1 
Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E +QFD   YD KM+ELL++DGQEFF SYDEV+DSFDAMGLQEN LRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGLAPEGTQFDGRQYDAKMSELLSTDGQEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
[Close]
BLAST of Ca_04813 vs. DB:Swiss
Match: IF415_TOBAC (Eukaryotic initiation factor 4A-15 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 5.046e-53
Identity = 82/99 (82.83%), Postives = 89/99 (89.90%), Query Frame = 1 
Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +G   E SQFDA  +DTKMNELL++DGQ+FF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGAAPEGSQFDARQFDTKMNELLSADGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
[Close]
BLAST of Ca_04813 vs. DB:Swiss
Match: IF4A8_TOBAC (Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.816e-51
Identity = 78/92 (84.78%), Postives = 86/92 (93.48%), Query Frame = 1 
Query:  145 SQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +QFDA  YD+KMN+LLA+DG++FF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    9 AQFDARQYDSKMNDLLAADGKDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
[Close]
BLAST of Ca_04813 vs. DB:Swiss
Match: IF413_TOBAC (Eukaryotic initiation factor 4A-13 (Fragment) OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.530e-51
Identity = 79/99 (79.80%), Postives = 86/99 (86.87%), Query Frame = 1 
Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDA  YD KM ELL ++ +EFF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC G+LQ
Sbjct:    2 AGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100
[Close]
BLAST of Ca_04813 vs. DB:Swiss
Match: IF410_TOBAC (Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 9.936e-51
Identity = 79/99 (79.80%), Postives = 86/99 (86.87%), Query Frame = 1 
Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDA  YD KM ELL ++ +EFF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC G+LQ
Sbjct:    2 AGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100
[Close]
BLAST of Ca_04813 vs. DB:Swiss
Match: IF4A7_TOBAC (Eukaryotic initiation factor 4A-7 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.037e-50
Identity = 79/99 (79.80%), Postives = 86/99 (86.87%), Query Frame = 1 
Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDA  YD KM ELL ++ +EFF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC G+LQ
Sbjct:    2 AGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100
[Close]
BLAST of Ca_04813 vs. DB:Swiss
Match: IF414_TOBAC (Eukaryotic initiation factor 4A-14 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.071e-50
Identity = 79/99 (79.80%), Postives = 86/99 (86.87%), Query Frame = 1 
Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDA  YD KM ELL ++ +EFF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC G+LQ
Sbjct:    2 AGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100
[Close]
BLAST of Ca_04813 vs. DB:Swiss
Match: IF411_TOBAC (Eukaryotic initiation factor 4A-11 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.094e-50
Identity = 80/99 (80.81%), Postives = 86/99 (86.87%), Query Frame = 1 
Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +GL  E SQFDA  YD KM ELL ++ QEFF SYDEV++SFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGLAPEGSQFDARQYDAKMTELLGTEQQEFFTSYDEVYESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
[Close]
BLAST of Ca_04813 vs. DB:Swiss
Match: IF4A9_TOBAC (Eukaryotic initiation factor 4A-9 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.293e-49
Identity = 78/99 (78.79%), Postives = 86/99 (86.87%), Query Frame = 1 
Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +G   E SQFDA  YD+KM ELL ++GQ+FF SYDEV+ SFDAMGL+EN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGAAPEGSQFDARQYDSKMTELLNAEGQDFFTSYDEVYHSFDAMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
[Close]
BLAST of Ca_04813 vs. DB:Swiss
Match: IF4A1_ORYSJ (Eukaryotic initiation factor 4A-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0701100 PE=2 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 3.225e-49
Identity = 79/100 (79.00%), Postives = 86/100 (86.00%), Query Frame = 1 
Query:  124 SGLTLERSQFDANHYDTKMNELLAS-DGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +G+  E SQFDA HYD+KM ELL   + +EFF SYDEVH+SFD MGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC GILQ
Sbjct:    2 AGMAPEGSQFDAKHYDSKMQELLNQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 101
[Close]
BLAST of Ca_04813 vs. DB:Swiss
Match: IF4A2_NICPL (Eukaryotic initiation factor 4A-2 OS=Nicotiana plumbaginifolia OX=4092 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.384e-49
Identity = 77/99 (77.78%), Postives = 85/99 (85.86%), Query Frame = 1 
Query:  124 SGLTLERSQFDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ 420
            +G   E SQFDA  +D KM ELL ++ +EFF SYDEV+DSFDAMGLQEN LRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKT TFC G+LQ
Sbjct:    2 AGSAPEGSQFDARQFDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100
The following BLAST results are available for this feature:
BLAST of Ca_04813 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
IF415_TOBAC2.340e-4282.83Eukaryotic initiation factor 4A-15 OS=Nicotiana ta... [more]
IF4A8_TOBAC5.763e-4181.44Eukaryotic initiation factor 4A-8 OS=Nicotiana tab... [more]
IF4A7_TOBAC1.677e-4079.80Eukaryotic initiation factor 4A-7 OS=Nicotiana tab... [more]
IF414_TOBAC1.677e-4079.80Eukaryotic initiation factor 4A-14 OS=Nicotiana ta... [more]
IF413_TOBAC1.677e-4079.80Eukaryotic initiation factor 4A-13 (Fragment) OS=N... [more]
IF411_TOBAC1.677e-4080.81Eukaryotic initiation factor 4A-11 OS=Nicotiana ta... [more]
IF410_TOBAC1.677e-4079.80Eukaryotic initiation factor 4A-10 OS=Nicotiana ta... [more]
IF4A9_TOBAC1.419e-3978.79Eukaryotic initiation factor 4A-9 OS=Nicotiana tab... [more]
IF4A2_NICPL2.421e-3977.78Eukaryotic initiation factor 4A-2 OS=Nicotiana plu... [more]
IF4A1_ORYSJ2.421e-3979.00Eukaryotic initiation factor 4A-1 OS=Oryza sativa ... [more]

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BLAST of Ca_04813 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7LI94_MEDTR9.234e-4488.89Eukaryotic initiation factor 4A OS=Medicago trunca... [more]
I1L1K7_SOYBN1.474e-4184.85Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
C6T8X3_SOYBN1.925e-4184.85Putative uncharacterized protein OS=Glycine max PE... [more]
E5GB87_CUCME3.284e-4183.84Helicase OS=Cucumis melo subsp. melo PE=4 SV=1[more]
Q7X9E7_PHAVU7.316e-4182.83Translation initiation factor 4A (Fragment) OS=Pha... [more]
M0SW70_MUSAM1.248e-4083.84Uncharacterized protein OS=Musa acuminata subsp. m... [more]
I1KUR0_SOYBN1.248e-4076.85Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
M0U641_MUSAM1.630e-4082.83Uncharacterized protein OS=Musa acuminata subsp. m... [more]
C6TJ25_SOYBN1.630e-4082.83Putative uncharacterized protein OS=Glycine max PE... [more]
C6TI26_SOYBN2.780e-4082.83Putative uncharacterized protein OS=Glycine max PE... [more]

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BLAST of Ca_04813 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
IF415_TOBAC5.046e-5382.83Eukaryotic initiation factor 4A-15 OS=Nicotiana ta... [more]
IF4A8_TOBAC1.816e-5184.78Eukaryotic initiation factor 4A-8 OS=Nicotiana tab... [more]
IF413_TOBAC2.530e-5179.80Eukaryotic initiation factor 4A-13 (Fragment) OS=N... [more]
IF410_TOBAC9.936e-5179.80Eukaryotic initiation factor 4A-10 OS=Nicotiana ta... [more]
IF4A7_TOBAC1.037e-5079.80Eukaryotic initiation factor 4A-7 OS=Nicotiana tab... [more]
IF414_TOBAC1.071e-5079.80Eukaryotic initiation factor 4A-14 OS=Nicotiana ta... [more]
IF411_TOBAC1.094e-5080.81Eukaryotic initiation factor 4A-11 OS=Nicotiana ta... [more]
IF4A9_TOBAC2.293e-4978.79Eukaryotic initiation factor 4A-9 OS=Nicotiana tab... [more]
IF4A1_ORYSJ3.225e-4979.00Eukaryotic initiation factor 4A-1 OS=Oryza sativa ... [more]
IF4A2_NICPL5.384e-4977.78Eukaryotic initiation factor 4A-2 OS=Nicotiana plu... [more]
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InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014014RNA helicase, DEAD-box type, Q motifPROFILEPS51195Q_MOTIFcoord: 80..108
score: 9
NoneNo IPR availableGENE3D3.40.50.300no descriptioncoord: 76..140
score: 2.4
NoneNo IPR availableGENE3D3.50.30.30no descriptioncoord: 3..52
score: 8
NoneNo IPR availablePANTHERPTHR24031FAMILY NOT NAMEDcoord: 46..140
score: 1.7
NoneNo IPR availablePANTHERPTHR24031:SF2SUBFAMILY NOT NAMEDcoord: 46..140
score: 1.7
NoneNo IPR availableSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 80..140
score: 7.4
NoneNo IPR availableSEGsegsegcoord: 34..46
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_04813_v1.0_kabuli ID=Ca_04813_v1.0_kabuli; Name=Ca_04813; organism=Cicer arietinum; type=mRNA; length=423bp
ATGACACAAAATGCGGGCTACACAGCTGTAATTGTCTATGACAATGAAGA
TGGTGGCGTCCTGGTTGCAATGGCAGGAAATTCTGCTGGTATAAGAATAC
ATGTTGTATTTGTATCAAAAGCTTCGGGTTTGACTCTAGAAAGATCACAA
TTTGATGCTAATCATTATGACACTAAGATGAATGAACTGCTTGCCAGTGA
TGGGCAAGAATTCTTCGCCTCATATGATGAAGTCCATGATAGCTTTGATG
CAATGGGGCTGCAAGAAAATCCTCTGCGAGGCATATATGCTTACGGTTTT
GAGAGGCCTTCTGCAATCCAGCAAAGAGGAATTGTTCCTTTCTGCAAAGG
TCTGGATGTGATTCAACAGGCTCAATCAGGAACTGGGAAGACAACAACAT
TTTGTTTTGGAATTTTGCAGTAG
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protein sequence of Ca_04813_v1.0_kabuli

>Ca_04813_v1.0_kabuli ID=Ca_04813_v1.0_kabuli; Name=Ca_04813_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=140bp
MTQNAGYTAVIVYDNEDGGVLVAMAGNSAGIRIHVVFVSKASGLTLERSQ
FDANHYDTKMNELLASDGQEFFASYDEVHDSFDAMGLQENPLRGIYAYGF
ERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFCFGILQ
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mRNA from alignment at Ca5:31117641..31118063-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_04813_v1.0_kabuli ID=Ca_04813_v1.0_kabuli; Name=Ca_04813; organism=Cicer arietinum; type=mRNA; length=423bp; location=Sequence derived from: Ca5:31117641..31118063- (Cicer arietinum
ATGACACAAAATGCGGGCTACACAGCTGTAATTGTCTATGACAATGAAGA
TGGTGGCGTCCTGGTTGCAATGGCAGGAAATTCTGCTGGTATAAGAATAC
ATGTTGTATTTGTATCAAAAGCTTCGGGTTTGACTCTAGAAAGATCACAA
TTTGATGCTAATCATTATGACACTAAGATGAATGAACTGCTTGCCAGTGA
TGGGCAAGAATTCTTCGCCTCATATGATGAAGTCCATGATAGCTTTGATG
CAATGGGGCTGCAAGAAAATCCTCTGCGAGGCATATATGCTTACGGTTTT
GAGAGGCCTTCTGCAATCCAGCAAAGAGGAATTGTTCCTTTCTGCAAAGG
TCTGGATGTGATTCAACAGGCTCAATCAGGAACTGGGAAGACAACAACAT
TTTGTTTTGGAATTTTGCAGTAG
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Coding sequence (CDS) from alignment at Ca5:31117641..31118063-

>Ca_04813_v1.0_kabuli ID=Ca_04813_v1.0_kabuli; Name=Ca_04813; organism=Cicer arietinum; type=CDS; length=423bp; location=Sequence derived from: Ca5:31117641..31118063- (Cicer arietinum
ATGACACAAAATGCGGGCTACACAGCTGTAATTGTCTATGACAATGAAGA
TGGTGGCGTCCTGGTTGCAATGGCAGGAAATTCTGCTGGTATAAGAATAC
ATGTTGTATTTGTATCAAAAGCTTCGGGTTTGACTCTAGAAAGATCACAA
TTTGATGCTAATCATTATGACACTAAGATGAATGAACTGCTTGCCAGTGA
TGGGCAAGAATTCTTCGCCTCATATGATGAAGTCCATGATAGCTTTGATG
CAATGGGGCTGCAAGAAAATCCTCTGCGAGGCATATATGCTTACGGTTTT
GAGAGGCCTTCTGCAATCCAGCAAAGAGGAATTGTTCCTTTCTGCAAAGG
TCTGGATGTGATTCAACAGGCTCAATCAGGAACTGGGAAGACAACAACAT
TTTGTTTTGGAATTTTGCAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR014014RNA_helicase_DEAD_Q_motif