Ca_04856, Ca_04856_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_04856 vs. SwissProt
Match: SKI23_ARATH (F-box protein SKIP23 OS=Arabidopsis thaliana GN=SKIP23 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.138e-11 Identity = 61/243 (25.10%), Postives = 107/243 (44.03%), Query Frame = 1 Query: 13 FVRKIVLSWSPTKSD-DFTAFAIVGLNNLAFCKKGYDSWILLTNEVYFWEDAVYHNGLFYAVSKEGMIAVCDVDVRRVSIFGPMPPIQFGGDIHYAVFSGEDLLLVTRDLEQEFSD----MVDECYNYMSMY---RTVGFMVFKMDWNVMAWRRIETLCDKALFIGANSSMCFSAADFVG-CRADCIYFTDDYSDSNHDDAVAKHDFGIFRLSDESIEPLPCYPRNSYPRFGWPFGPFPIWIS 714 ++ K V+ + D F I LA + +W ++ + ++D + +G F+AV G V D ++++ P+ FGGD + + S ++LLV L E + V+E + + + Y RTV F V++ +W + L DK LF+G +S+ SA+D + C ++F + + A+ D G+F IE + P Y + WP P WI+ Sbjct: 157 YLEKAVVKYLDCDGDYKFVLLTIHVSGKLAVFRSWDRAWTVINDMPSPYDDVMLFDGRFFAVDNNGRTVVVDYSSLKLTLVAS--PV-FGGDKKFLIESCGEMLLVDMYLSLEAVEGDPGFVEEIFEHPAFYMNERTVKFKVYRFVEREESWVDVYDLEDKMLFLGDDSTFSASASDILPLCDGSSVFFNGNVFNGEDLGAMQDRDLGVFDFRSGKIELVQKLP--EYAKLFWPPPP---WIT 391
BLAST of Ca_04856 vs. SwissProt
Match: FB315_ARATH (Probable F-box protein At1g44080 OS=Arabidopsis thaliana GN=At1g44080 PE=4 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.942e-11 Identity = 54/201 (26.87%), Postives = 86/201 (42.79%), Query Frame = 1 Query: 58 DFTAFAIVGLNNLAFCKKGYDS--WILLTNE-VYFWEDAVYHNGLFYAVSKEGMIAVCDVDVRRVSIFGPMPPIQFGG-----DIHYAVFSGEDLLLVTRDLEQEFSDMVDECYNYMSMYRTVGFMVFKMDWNVMAWRRIETLCDKALFIGANSSMCFSAADFVGCRADCIYFTDDYSDSNHDDAVAKHDFGIFRLSDESI 636 D F + N + CK G ++ W + NE + D + H G YA+ G I + + +GP P+ F + + GE L V ++F C + RTV F V+KMD N++ W + +L DKAL + ++ A+++ GC + IYF D + D +F+L D SI Sbjct: 142 DNVFFVVDFKNEIWCCKSGEETRHWTRINNEEAKGFLDIILHKGKIYALDLTGAIWWISLSELSIYQYGPSTPVDFYEIDNCKEKRLVEYCGE--LCVVHRFYKKF------CVKRVLTERTVCFKVYKMDKNLVEWVEVSSLGDKALIVATDNCFLVLASEYYGCLENAIYFND------------REDVSVFKLDDCSI 322
BLAST of Ca_04856 vs. SwissProt
Match: FB117_ARATH (F-box protein At2g26160 OS=Arabidopsis thaliana GN=At2g26160 PE=2 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 4.783e-10 Identity = 50/183 (27.32%), Postives = 80/183 (43.72%), Query Frame = 1 Query: 76 IVGLNNLAF----------CKKGYDS---WILLTNEVYFWEDAVYHNGLFYAVSKEGMIAVCDVDVRRVSIFGPMPPIQFGG----DIHYAVFSGEDLLLVTRDLEQEFSDMVDECYNYMSMYRTVGFMVFKMDWNVMAWRRIETLCDKALFIGANSSMCFSAADFVGCRADCIYFTDDYSDS 573 +V L+NL F CK G +S W + N+V + D + H G YA+ G I + + F P P+ + G + + G+ ++ L++ + RTVGF V+KMD V W + +L DKAL + +S A+++ GC + IYF D+ S Sbjct: 152 VVFLDNLIFAVGQDDKIWCCKSGEESSRIWTKIKNQVEDFLDIILHKGQVYALDLTGAIWWISLSPLSLLQFTPSIPMDYDGYDSCNKRLVEYCGDLCIIHQLRLKKAY---------IRRSQRTVGFKVYKMDEYVAKWVEVRSLGDKALIVARDSCFTVVASEYHGCLNNSIYFVDNVRKS 325
BLAST of Ca_04856 vs. SwissProt
Match: FB187_ARATH (Putative F-box protein At3g25750 OS=Arabidopsis thaliana GN=At3g25750 PE=4 SV=2) HSP 1 Score: 62.7734 bits (151), Expect = 2.374e-9 Identity = 50/185 (27.03%), Postives = 80/185 (43.24%), Query Frame = 1 Query: 88 NNLAFCK--KGYDSWILLTNEVYFWEDAVYHNGLFYAVSKEGMIAVCDVDVRRVSIFGPMPPIQFGGDIHYAVFSGEDLLLVTRDLEQEFSDMVDECYNYMSMYRTVGFMVFKMDWNVMAWRRIETLCDKALFIGANSSMCFSAADFVGCRADCIYFTDDYSDSNHDDAVAKHDFGIFRLSDESI 636 N + CK +G SW + N+V + D + H G YAV +G I + + P+ + Y S +D LV + + N++ RTVGF V+KMD ++ W + L D L + NS A+++ GC + IYF ++ D + +F+L D SI Sbjct: 170 NKIWCCKTREGSRSWTKIKNQVEDFSDIILHMGRIYAVDLKGAIWWISLSQLTIVQQTSSTPLDY-----YKYDSCQDTRLVEYCGDLCIVHELSITRNHIQ--RTVGFKVYKMDEDLAKWVEVSCLGDNTLIVACNSCFTVVASEYHGCLKNSIYF-------SYYDVKKAENIKVFKLDDGSI 340
BLAST of Ca_04856 vs. SwissProt
Match: FB311_ARATH (F-box protein At4g35733 OS=Arabidopsis thaliana GN=At4g35733 PE=2 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 9.973e-8 Identity = 47/178 (26.40%), Postives = 81/178 (45.51%), Query Frame = 1 Query: 124 WI-LLTNEVYFWEDAVYHNGLFYAVSKEGMIAVCDVDVRRVSIFGPMP-PIQFGG-----DIHYAVFSGEDLLLVTRDLEQEFSDMVDECYNYMSMYRTVGFMVFKMDWNVMAWRRIETLCDKALFIGANSSMCFSAADFVGCRADCIYFTDDYSDSNHDDAVAKHDFGIFRLSDESI 636 W+ ++ EV + D V+H G YA+ G + + + FGP P+ + D + + G DL +V R + VD + TVGF V+KMD ++ + +++L DKA + +S A ++ GC + IYFT+ +++ +F+L D SI Sbjct: 181 WVRIMDEEVKLFSDIVFHKGYMYALDLTGAVWWISLSEFGIFQFGPSSTPMDYCDIDECKDKRFVEYCG-DLCIVHRFSRKFRIKRVD-------IDMTVGFKVYKMDEELVEYVEVKSLGDKAFVMATDSCFSVLAREYYGCLENSIYFTE------------QNNVKVFKLGDGSI 338
BLAST of Ca_04856 vs. SwissProt
Match: FB72_ARATH (Putative F-box protein At1g65770 OS=Arabidopsis thaliana GN=At1g65770 PE=4 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 1.701e-7 Identity = 42/141 (29.79%), Postives = 65/141 (46.10%), Query Frame = 1 Query: 142 EVYFWEDAVYHNGLFYAVSKEGMIAVCDVDVRRVSIFGPMPPIQFGGDIHYAVFSGEDLLLVTRDLEQEFSDMVDEC-YNYMSMYRTVGFMVFKMDWNVMAWRRIETLCDKALFIGANSSMCFSAADFVGCRADCIYFTDD 561 E Y + D + H G YA+ G++ D++ + FGP+ + GD GE ++ E + D+ Y Y +TVGF V+K D +++L DKA I ++ A +F GC + IYFTDD Sbjct: 189 EGYEFSDIIVHKGQTYALDSIGIVYWIRSDLKFIR-FGPLVG-DWTGDRRLVECCGEFYIVERLVGESTWKRKADDTGYEYA---KTVGFKVYKFDDEQGKMMEVKSLGDKAFVIATDTCFSVLAHEFYGCLENAIYFTDD 324
BLAST of Ca_04856 vs. TrEMBL
Match: I1JSY2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 298.901 bits (764), Expect = 9.051e-79 Identity = 148/249 (59.44%), Postives = 178/249 (71.49%), Query Frame = 1 Query: 1 MCKTFVRKIVLSWSPTKSDDFTAFAIVGLNNLAFCKKGYDSWILLTNE---VYFWEDAVYHNGLFYAVSKEGMIAVCDVDVR----RVSIFGPMPPIQFGGDIHYAVFSGEDLLLVTRDLEQEFSDMVDECYNYMSMYRTVGFMVFKMDWNVMAWRRIETLCDKALFIGANSSMCFSAADFVGCRADCIYFTDDYSDSNHDDAVAKHDFGIFRLSDESIEPLPCYPRNSYPRFGWPFGPFPIWISPNPC 726 MC +F+ K+VLS SPT +DDF A AIVG NNLAFC+ GYDSWI L E + WED V +NGLF+AVSK G IAVCD RVSI P F GDIHYAVFS D+LL+ R L+Q+FSD E + + YRTVGF VFKM+W ++ W+R+ETL ++ LF+G NSS+ F A+DFVGC ADCIYFTDDYS+SN DDA KHD G+FRL D+SIEPLPC+ +NS R W P PIW+SPNPC Sbjct: 150 MCNSFLGKVVLSASPTLNDDFAALAIVGQNNLAFCRNGYDSWIFLNGEEEEMNCWEDVVNYNGLFFAVSKGGTIAVCDAGEGCFPPRVSIIQTTTPFGFAGDIHYAVFSAGDMLLLIRVLDQDFSDHAGEESDLV--YRTVGFEVFKMNWGLLTWQRVETLGERVLFVGGNSSLSFCASDFVGCSADCIYFTDDYSESNDDDACGKHDLGVFRLRDKSIEPLPCFNQNSCSRLRW---PLPIWVSPNPC 393
BLAST of Ca_04856 vs. TrEMBL
Match: B9R8H5_RICCO (Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_1599830 PE=4 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 9.410e-60 Identity = 126/247 (51.01%), Postives = 161/247 (65.18%), Query Frame = 1 Query: 1 MCKTFVRKIVLSWSPTKSDDFTAFAIVG-LNNLAFCKKGYDSWILLTNEVYFWEDAVYHNGLFYAVSKEGMIAVCDV--DVRRVSIFGPMPPIQFGGDIHYAVFSGEDLLLVTR--DLEQEFSDMVDECYNYMSMYRTVGFMVFKMDWNVMAWRRIETLCDKALFIGANSSMCFSAADFVGCRADCIYFTDDYSDSNHDDAVAKHDFGIFRLSDESIEPLPCYPRNSYPRFGWPFGPFPIWISPNPC 726 M +F+RK+VLS SP K ++F AI+ ++LA+C+ G SW L+ N F ED ++ NG+FYAV+K G I +CD+ D RVS P Q GGD+ Y V SG++LLLVTR DLE EF E + +YRT+ F VF++DWN W R+ TL DKALFIG NSS+ SA DF GC +CIY+TDDY D+N+D HD GIF+L DE+IEPLPCYPRN W P P+W+SPNPC Sbjct: 160 MRDSFIRKVVLSSSPLKDNNFVVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIVICDISSDSPRVSFMET--PRQAGGDMQYLVNSGDELLLVTRYLDLEYEFDHPDMEPH---LIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDANYDGHFGDHDLGIFKLCDETIEPLPCYPRNFTSPLQW--SP-PLWVSPNPC 398
BLAST of Ca_04856 vs. TrEMBL
Match: B9GQ57_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_753951 PE=4 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 1.359e-58 Identity = 122/243 (50.21%), Postives = 153/243 (62.96%), Query Frame = 1 Query: 13 FVRKIVLSWSPT--KSDDFTAFAIV-GLNNLAFCKKGYDSWILLTNEVYFWEDAVYHNGLFYAVSKEGMIAVCDVDVRRVSIFGPMPPIQFGGDIHYAVFSGEDLLLVTR--DLEQEFSDMVDECYNYMSMYRTVGFMVFKMDWNVMAWRRIETLCDKALFIGANSSMCFSAADFVGCRADCIYFTDDYSDSNHDDAVAKHDFGIFRLSDESIEPLPCYPRNSYPRFGWPFGPFPIWISPNPC 726 F++K+V+S SP K D F A AI+ +LA+CK G + W ++ N F ED +Y NGLFYAV+K G I VCDV+ + P Q GGD+ Y V SG+ LLLVTR DL+ EF + Y+T F VFK+D N W R+ +L D LFIG NSS+ SA+ GC DCIY+TDDYS +N+D + +HD GIF+LSD SIEPLPCYPRNSY R W P P+WISPNPC Sbjct: 163 FIKKVVMSSSPLEKKGDFFVAMAILCSTGDLAYCKNGDECWNIVENSRSFSEDVIYFNGLFYAVNKAGQIVVCDVNGNSPKVSFIETPRQIGGDMQYLVSSGDGLLLVTRYLDLDVEFDIFI---------YKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSANNYDGHIGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQW---PPPLWISPNPC 393
BLAST of Ca_04856 vs. TrEMBL
Match: M5XE18_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006772mg PE=4 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 4.234e-52 Identity = 112/246 (45.53%), Postives = 152/246 (61.79%), Query Frame = 1 Query: 1 MCKTFVRKIVLSWSPTKSDDFTAFAIVG-LNNLAFCKKGYDSWILLTNEVYFWEDAVYHNGLFYAVSKEGMIAVCDVD---VRRVSIFGPMPPIQFGGDIHYAVFSGEDLLLVTRDLEQEFSDMVDECYNYMSMYRTVGFMVFKMDWNVMAWRRIETLCDKALFIGANSSMCFSAADFVGCRADCIYFTDDYSDSNHDDAVAKHDFGIFRLSDESIEPLPCYPRNSYPRFGWPFGPFPIWISPNPC 726 M +F++K+VLS SP ++ FTA AI+ +LA+C+ G SW + F ED + NGLFYAV +G++AVCDV+ RV+I P P + D+ Y V G DLLLV+R LE E D N YRT GF+VF+M+W W ++E L ++ +FIG NSS SA+DF G +CIYFTDDYS+SN++ + +D GIFR+ D +I+ LP YPRNS WP G P+W+ PNPC Sbjct: 158 MRDSFLKKVVLSSSPLEASGFTALAILSQTGDLAYCRDGDQSWTFIDGARSFSEDVISVNGLFYAVDSKGVVAVCDVEGPSAPRVAII-PTPRLDDAADMRYLVNLGADLLLVSRYLEIERWD------NTNVNYRTTGFVVFRMNWAGARWEKVENLGERMVFIGENSSFSLSASDFPGSVGNCIYFTDDYSESNYESGLGGYDSGIFRIWDGTIQELPPYPRNSNYEVHWPPGSLPLWVIPNPC 396
BLAST of Ca_04856 vs. TrEMBL
Match: A5AJY7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031843 PE=4 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.043e-50 Identity = 112/245 (45.71%), Postives = 148/245 (60.41%), Query Frame = 1 Query: 1 MCKTFVRKIVLSWSPTKSDDFTAFAIVG-LNNLAFCKKGYDSWILLTNEVYFWEDAVYHNGLFYAVSKEGMIAVCDVDVR--RVSIFGPMPPIQFGGDIHYAVFSGEDLLLVTRDLEQEFSDMVDECYNYMSMYRTVGFMVFKMDWNVMAWRRIETLCDKALFIGANSSMCFSAADFVGCRADCIYFTDDYSDSNHDDAVAKHDFGIFRLSDESIEPLPCYPRNSYPRFGWPFGPFPIWISPNPC 726 M +F++K +LS SP DF A I+ +LA C+K DSW L + + ED ++H GLFYAV+K G IAVCDV RVSI P QFGGD+ Y V SGE+LLLVTR L+ + D+ +YRT F V ++D W + +L D+ALF+G N S+ S+ DF GC+ +CIY+TDDYS+ N+D + D GIF L D SIEPLPC S+ R W P P+W++PNPC Sbjct: 157 MRDSFIKKTILSSSPANGSDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIEM--PQQFGGDLQYLVESGEELLLVTRYLDLTYDVEXDQT---SLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSIEPLPC----SHFRIRW---PPPLWVTPNPC 389
BLAST of Ca_04856 vs. TrEMBL
Match: E5GCD1_CUCME (Ubiquitin-protein ligase OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 6.326e-48 Identity = 111/244 (45.49%), Postives = 149/244 (61.07%), Query Frame = 1 Query: 1 MCKTFVRKIVLSWSPTKSDDFTAFAIVGLN-NLAFCKKGYDSWILLTNEVYFWEDAVYHNGLFYAVSKEGMIAVCDVDVRRVSIFGPMPPIQFGGDIHYAVFSGEDLLLVTRDLEQEFSDMVDECYNYMSMYRTVGFMVFKMDWNVMAWRRIETLCDKALFIGANSSMCFSAADFVGCRADCIYFTDDYSDSNHDDAVAKHDFGIFRLSDESIEPLPCYPRNSYPRFG-WPFGPFPIWISPNPC 726 M +FV+KIVLS SP+ +DF A AI+ + +LAFC+ G SW + + ED +Y +G+FYAV K G++++ D+ R + Q GDI Y V G++LLLV+R L+ M DE + M YRTV F VF+M+W W ++E L + ALF+G NSSM FSAADF +CIY+TDDYSDS++ + D GIFRL DES EPLP Y S+ R P PIW++PNPC Sbjct: 155 MRDSFVKKIVLSSSPSNQNDFLAVAILNHSGDLAFCRSGGGSWTFVDDAPSDCEDVIYTDGVFYAVDKYGVVSLMDLRGSRSQVSLVATERQLAGDIQYLVRLGQELLLVSRYLDIVNDGMDDELISVM--YRTVRFEVFRMEWEGPRWEKVENLNEMALFVGGNSSMAFSAADFGEISGNCIYYTDDYSDSDYQGQGEEPDMGIFRLCDESFEPLPYYSGGSHSRRRLLP----PIWVTPNPC 392
BLAST of Ca_04856 vs. TrEMBL
Match: M1AM29_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009960 PE=4 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 5.921e-46 Identity = 103/246 (41.87%), Postives = 143/246 (58.13%), Query Frame = 1 Query: 1 MCKTFVRKIVLSWSPTKSDDFTAFAIVG-LNNLAFCKKGYDSWILLTNEVYFWEDAVYHNGLFYAVSKEGMIAVCDVDVRRVSIFGPMPPIQFGGDIHYAVFSGEDLLLVTRDLEQEFSDMVDECYNYMSM-YRTVGFMVFKM--DWNVMAWRRIETLCDKALFIGANSSMCFSAADFVGCRADCIYFTDDYSDSNHDDAVAKHDFGIFRLSDESIEPLPCYPRNSYPRFGWPFGPFPIWISPNPC 726 M +F+RK V+S SP++ +F I+ LA+CK G SW + + ++ ED +Y GLFYAV K G IAVCDV S+ P Q GGD+ Y V + ++ LLVTR LE + +D Y+ + + Y+TV F VF++ + W I +L + LF+G NSS+ A+DF GC + IYFTDDY ++N+D HD G + L+D SIE L C PRNS+ W P PIW +PNPC Sbjct: 158 MRDSFIRKAVISSSPSRDPNFITMVILNETGELAYCKNGEHSWKFIDDARFYDEDVIYFEGLFYAVHKSGEIAVCDVSGDTPSVSFIETPKQIGGDMQYLVKTNDEFLLVTRFLELD----IDAAYHQLDVVYKTVEFCVFRLVLERPRCEWEEINSLGETMLFLGENSSLALLASDFPGCEGNRIYFTDDYCEANYDGVDGNHDLGYYNLADGSIEALSCCPRNSHSVLRW---PPPIWFTPNPC 396
BLAST of Ca_04856 vs. TrEMBL
Match: K4BVT3_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc04g082060.2 PE=4 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 2.250e-45 Identity = 103/245 (42.04%), Postives = 143/245 (58.37%), Query Frame = 1 Query: 1 MCKTFVRKIVLSWSPTKSDDFTAFAIV-GLNNLAFCKKGYDSWILLTNEVYFWEDAVYHNGLFYAVSKEGMIAVCDVDVRRVSIFGPMPPIQFGGDIHYAVFSGEDLLLVTRDLEQEFSDMVDECYNYMSM-YRTVGFMVFKM--DWNVMAWRRIETLCDKALFIGANSSMCFSAADFVGCRADCIYFTDDYSDSNHDDAVAKHDFGIFRLSDESIEPLPCYPRNSYPRFGWPFGPFPIWISPNP 723 M +F+RK V+S SP++ +F I+ G LA+CK G SW + + ++ ED +Y GLFYAV K G IAVCDV S+ P Q GGD+ Y V + +D LLVTR LE + +D Y+ + + Y+TV F VF++ + W I +L + LF+G NSS+ A+DF GC + IYFTDDY ++N+D HD G + L+D SIE L C PR+S+ W P PIW +PNP Sbjct: 158 MRDSFIRKAVISSSPSRDPNFITMVILNGTGELAYCKNGEHSWKFIDDARFYDEDVIYFEGLFYAVHKSGEIAVCDVSGDSPSVSFIETPKQIGGDMQYLVKTNDDFLLVTRFLELD----IDAAYHKLDVVYKTVEFCVFRLVLERPRCEWEEINSLGETMLFLGENSSLALLASDFPGCGGNRIYFTDDYCEANYDGVDGNHDLGYYNLADGSIEALSCCPRSSHSMLRW---PPPIWFTPNP 395
BLAST of Ca_04856 vs. TrEMBL
Match: K7KSK5_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.111e-35 Identity = 69/127 (54.33%), Postives = 89/127 (70.08%), Query Frame = 1 Query: 349 FSDMVDECYNYMSM-YRTVGFMVFKMDWNVMAWRRIETLCDKALFIGANSSMCFSAADFVGCRADCIYFTDDYSDSNHDDAVAKHDFGIFRLSDESIEPLPCYPRNSYPRFGWPFGPFPIWISPNPC 726 F D+ D + ++ YRTVGF VFKM+W + +R+ETL ++ F+G NSS+ F A++F C +DCIYFTDDYS+SN DDA KHD G+F L D+SIEPLPC+ NS R GWP IW+SPNPC Sbjct: 48 FFDLSDHAWEESNLVYRTVGFEVFKMNWGFLTCQRVETLGERLFFVGGNSSLSFCASEFDACSSDCIYFTDDYSESNEDDACGKHDLGVFSLRDKSIEPLPCFDHNSCSRLGWPLS---IWVSPNPC 171
BLAST of Ca_04856 vs. TrEMBL
Match: F6H0D2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g00600 PE=4 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 6.356e-32 Identity = 72/154 (46.75%), Postives = 96/154 (62.34%), Query Frame = 1 Query: 265 PIQFGGDIHYAVFSGEDLLLVTRDLEQEFSDMVDECYNYMSMYRTVGFMVFKMDWNVMAWRRIETLCDKALFIGANSSMCFSAADFVGCRADCIYFTDDYSDSNHDDAVAKHDFGIFRLSDESIEPLPCYPRNSYPRFGWPFGPFPIWISPNPC 726 P QFGGD+ Y V SGE+LLLVTR L+ + D+ +YRT F V ++D W + +L D+ALF+G N S+ S+ DF GC+ +CIY+TDDYS+ N+D + D GIF L D SIEPLPC S+ R W P P+W++PNPC Sbjct: 2 PQQFGGDLQYLVESGEELLLVTRYLDLTYDVEPDQT---SLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSIEPLPC----SHFRIRW---PPPLWVTPNPC 145
BLAST of Ca_04856 vs. DB:Swiss
Match: SKI23_ARATH (F-box protein SKIP23 OS=Arabidopsis thaliana OX=3702 GN=SKIP23 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.318e-12 Identity = 58/226 (25.66%), Postives = 100/226 (44.25%), Query Frame = 1 Query: 61 FTAFAIVGLNNLAFCKKGYDSWILLTNEVYFWEDAVYHNGLFYAVSKEGMIAVCDVDVRRVSIFGPMPPIQFGGDIHYAVFSGEDLLLVTRDLEQEFSD----MVDECYNYMSMY---RTVGFMVFKMDWNVMAWRRIETLCDKALFIGANSSMCFSAADFVG-CRADCIYFTDDYSDSNHDDAVAKHDFGIFRLSDESIEPLPCYPRNSYPRFGWPFGPFPIWIS 714 F I LA + +W ++ + ++D + +G F+AV G V D ++++ P+ FGGD + + S ++LLV L E + V+E + + + Y RTV F V++ +W + L DK LF+G +S+ SA+D + C ++F + + A+ D G+F IE + P Y + WP P WI+ Sbjct: 174 FVLLTIHVSGKLAVFRSWDRAWTVINDMPSPYDDVMLFDGRFFAVDNNGRTVVVDYSSLKLTLVAS--PV-FGGDKKFLIESCGEMLLVDMYLSLEAVEGDPGFVEEIFEHPAFYMNERTVKFKVYRFVEREESWVDVYDLEDKMLFLGDDSTFSASASDILPLCDGSSVFFNGNVFNGEDLGAMQDRDLGVFDFRSGKIELVQKLPE--YAKLFWPPPP---WIT 391
BLAST of Ca_04856 vs. DB:Swiss
Match: FB315_ARATH (Probable F-box protein At1g44080 OS=Arabidopsis thaliana OX=3702 GN=At1g44080 PE=4 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 1.054e-11 Identity = 52/191 (27.23%), Postives = 83/191 (43.46%), Query Frame = 1 Query: 88 NNLAFCKKGYDS--WILLTNE-VYFWEDAVYHNGLFYAVSKEGMIAVCDVDVRRVSIFGPMPPIQF-----GGDIHYAVFSGEDLLLVTRDLEQEFSDMVDECYNYMSMYRTVGFMVFKMDWNVMAWRRIETLCDKALFIGANSSMCFSAADFVGCRADCIYFTDDYSDSNHDDAVAKHDFGIFRLSDESI 636 N + CK G ++ W + NE + D + H G YA+ G I + + +GP P+ F + + GE L V ++F C + RTV F V+KMD N++ W + +L DKAL + ++ A+++ GC + IYF D + D +F+L D SI Sbjct: 152 NEIWCCKSGEETRHWTRINNEEAKGFLDIILHKGKIYALDLTGAIWWISLSELSIYQYGPSTPVDFYEIDNCKEKRLVEYCGE--LCVVHRFYKKF------CVKRVLTERTVCFKVYKMDKNLVEWVEVSSLGDKALIVATDNCFLVLASEYYGCLENAIYFND------------REDVSVFKLDDCSI 322
BLAST of Ca_04856 vs. DB:Swiss
Match: FB117_ARATH (F-box protein At2g26160 OS=Arabidopsis thaliana OX=3702 GN=At2g26160 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 4.063e-11 Identity = 50/183 (27.32%), Postives = 80/183 (43.72%), Query Frame = 1 Query: 76 IVGLNNLAF----------CKKGYDS---WILLTNEVYFWEDAVYHNGLFYAVSKEGMIAVCDVDVRRVSIFGPMPPIQFGG----DIHYAVFSGEDLLLVTRDLEQEFSDMVDECYNYMSMYRTVGFMVFKMDWNVMAWRRIETLCDKALFIGANSSMCFSAADFVGCRADCIYFTDDYSDS 573 +V L+NL F CK G +S W + N+V + D + H G YA+ G I + + F P P+ + G + + G+ ++ L++ + RTVGF V+KMD V W + +L DKAL + +S A+++ GC + IYF D+ S Sbjct: 152 VVFLDNLIFAVGQDDKIWCCKSGEESSRIWTKIKNQVEDFLDIILHKGQVYALDLTGAIWWISLSPLSLLQFTPSIPMDYDGYDSCNKRLVEYCGDLCIIHQLRLKKAY---------IRRSQRTVGFKVYKMDEYVAKWVEVRSLGDKALIVARDSCFTVVASEYHGCLNNSIYFVDNVRKS 325
BLAST of Ca_04856 vs. DB:Swiss
Match: FB187_ARATH (Putative F-box protein At3g25750 OS=Arabidopsis thaliana OX=3702 GN=At3g25750 PE=4 SV=2) HSP 1 Score: 62.3882 bits (150), Expect = 4.686e-10 Identity = 51/190 (26.84%), Postives = 85/190 (44.74%), Query Frame = 1 Query: 88 NNLAFCK--KGYDSWILLTNEVYFWEDAVYHNGLFYAVSKEGMI---AVCDVDVRRVSIFGPMPPIQFGG--DIHYAVFSGEDLLLVTRDLEQEFSDMVDECYNYMSMYRTVGFMVFKMDWNVMAWRRIETLCDKALFIGANSSMCFSAADFVGCRADCIYFTDDYSDSNHDDAVAKHDFGIFRLSDESI 636 N + CK +G SW + N+V + D + H G YAV +G I ++ + + + + P+ ++ D + G DL +V E S + + RTVGF V+KMD ++ W + L D L + NS A+++ GC + IYF+ + D + +F+L D SI Sbjct: 170 NKIWCCKTREGSRSWTKIKNQVEDFSDIILHMGRIYAVDLKGAIWWISLSQLTIVQQTSSTPLDYYKYDSCQDTRLVEYCG-DLCIV-----HELSITRNH------IQRTVGFKVYKMDEDLAKWVEVSCLGDNTLIVACNSCFTVVASEYHGCLKNSIYFS-------YYDVKKAENIKVFKLDDGSI 340
BLAST of Ca_04856 vs. DB:Swiss
Match: FB311_ARATH (F-box protein At4g35733 OS=Arabidopsis thaliana OX=3702 GN=At4g35733 PE=2 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 2.759e-7 Identity = 47/178 (26.40%), Postives = 81/178 (45.51%), Query Frame = 1 Query: 124 WI-LLTNEVYFWEDAVYHNGLFYAVSKEGMIAVCDVDVRRVSIFGPMP-PIQFG-----GDIHYAVFSGEDLLLVTRDLEQEFSDMVDECYNYMSMYRTVGFMVFKMDWNVMAWRRIETLCDKALFIGANSSMCFSAADFVGCRADCIYFTDDYSDSNHDDAVAKHDFGIFRLSDESI 636 W+ ++ EV + D V+H G YA+ G + + + FGP P+ + D + + G DL +V R + VD + TVGF V+KMD ++ + +++L DKA + +S A ++ GC + IYFT+ +++ +F+L D SI Sbjct: 181 WVRIMDEEVKLFSDIVFHKGYMYALDLTGAVWWISLSEFGIFQFGPSSTPMDYCDIDECKDKRFVEYCG-DLCIVHRFSRKFRIKRVD-------IDMTVGFKVYKMDEELVEYVEVKSLGDKAFVMATDSCFSVLAREYYGCLENSIYFTE------------QNNVKVFKLGDGSI 338
BLAST of Ca_04856 vs. DB:Swiss
Match: FB111_ARATH (F-box protein At2g17690 OS=Arabidopsis thaliana OX=3702 GN=SDC PE=2 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 3.138e-7 Identity = 28/95 (29.47%), Postives = 49/95 (51.58%), Query Frame = 1 Query: 394 RTVGFMVFKMDWNVMAWRRIETLCDKALFIGANSSMCFSAADFVGCRADCIYFTDDYSDSNHDDAVAKHDFGIFRLSDESIEPLPCYPRNSYPRF 678 +T+GF V+K D ++ W +++L DKA+ I ++ SA +F GC + IYFTD + + +F+L D SI + ++ + F Sbjct: 332 KTIGFKVYKNDEELLKWVEVKSLGDKAIVIATDACFSVSAHEFYGCLPNSIYFTDK----------KEEEVKVFKLDDGSITTMSESEQSCFQMF 416
BLAST of Ca_04856 vs. DB:Swiss
Match: FB72_ARATH (Putative F-box protein At1g65770 OS=Arabidopsis thaliana OX=3702 GN=At1g65770 PE=4 SV=1) HSP 1 Score: 53.1434 bits (126), Expect = 6.144e-7 Identity = 42/142 (29.58%), Postives = 65/142 (45.77%), Query Frame = 1 Query: 139 NEVYFWEDAVYHNGLFYAVSKEGMIAVCDVDVRRVSIFGPMPPIQFGGDIHYAVFSGEDLLLVTRDLEQEFSDMVDEC-YNYMSMYRTVGFMVFKMDWNVMAWRRIETLCDKALFIGANSSMCFSAADFVGCRADCIYFTDD 561 E Y + D + H G YA+ G++ D++ + FGP+ + GD GE ++ E + D+ Y Y +TVGF V+K D +++L DKA I ++ A +F GC + IYFTDD Sbjct: 188 EEGYEFSDIIVHKGQTYALDSIGIVYWIRSDLKFIR-FGPLVG-DWTGDRRLVECCGEFYIVERLVGESTWKRKADDTGYEYA---KTVGFKVYKFDDEQGKMMEVKSLGDKAFVIATDTCFSVLAHEFYGCLENAIYFTDD 324 The following BLAST results are available for this feature:
BLAST of Ca_04856 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot) Total hits: 6
BLAST of Ca_04856 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_04856 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 7
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_04856_v1.0_kabuli ID=Ca_04856_v1.0_kabuli; Name=Ca_04856; organism=Cicer arietinum; type=mRNA; length=729bpback to top protein sequence of Ca_04856_v1.0_kabuli >Ca_04856_v1.0_kabuli ID=Ca_04856_v1.0_kabuli; Name=Ca_04856_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=242bpback to top mRNA from alignment at Ca5:31547263..31547991+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_04856_v1.0_kabuli ID=Ca_04856_v1.0_kabuli; Name=Ca_04856; organism=Cicer arietinum; type=mRNA; length=729bp; location=Sequence derived from: Ca5:31547263..31547991+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca5:31547263..31547991+ >Ca_04856_v1.0_kabuli ID=Ca_04856_v1.0_kabuli; Name=Ca_04856; organism=Cicer arietinum; type=CDS; length=729bp; location=Sequence derived from: Ca5:31547263..31547991+ (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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