Ca_04828, Ca_04828_v1.0_kabuli (mRNA) Cicer arietinum
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_04828 vs. SwissProt
Match: PSMD3_DAUCA (Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Daucus carota GN=21D7 PE=1 SV=2) HSP 1 Score: 182.956 bits (463), Expect = 2.500e-46 Identity = 91/134 (67.91%), Postives = 116/134 (86.57%), Query Frame = 1
Query: 91 ALRKKLTASVISSFLDHVLTPGTEPHNKLSAYLPKEEDHEMEVDAATSAIQTHVAKHLLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHELTGDLAEICGSYVLIY 492
ALRKKL ASV+++FL+ L PG+E H +L++YLPKE++H+MEVD A SA T +AKH LPELEIYC+LLVL+FLIDQKKY+EAKACSSAS+A +KN+NRRTV+V+ASRL FYYS S+ELTGDLAEI G+ + ++
Sbjct: 58 ALRKKLNASVVNAFLNFSLVPGSEVHARLASYLPKEDEHDMEVDTAMSATTT-LAKHSLPELEIYCYLLVLIFLIDQKKYSEAKACSSASIARVKNLNRRTVEVLASRLYFYYSLSYELTGDLAEIRGNLLALH 190 HSP 2 Score: 23.0978 bits (48), Expect = 2.500e-46 Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2
Query: 11 PSNSVSPLIPSTLQ 52
PSNSV+ PSTLQ
Sbjct: 15 PSNSVTAATPSTLQ 28
BLAST of Ca_04828 vs. SwissProt
Match: PSD3A_ARATH (26S proteasome non-ATPase regulatory subunit 3 homolog A OS=Arabidopsis thaliana GN=RPN3A PE=1 SV=3) HSP 1 Score: 184.111 bits (466), Expect = 2.500e-46 Identity = 90/134 (67.16%), Postives = 113/134 (84.33%), Query Frame = 1
Query: 94 LRKKLTASVISSFLDHVLTPGTEPHNKLSAYLPKEEDHEMEVDAATSAIQTHVAKHLLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHELTGDLAEICGSYVLIYN 495
LR+KLT SV+SSFLD L PG+E H++LS+++PK ++H+MEVD A+SA Q +KHL ELEIYC+ +VLLFLIDQKKYNEAKACSSAS+A LKNVNRRT+DVIASRL FYYS S+E TGDLAEI G+ + +++
Sbjct: 57 LRQKLTGSVLSSFLDFALVPGSEAHSRLSSFVPKGDEHDMEVDTASSATQAAPSKHLPAELEIYCYFIVLLFLIDQKKYNEAKACSSASIARLKNVNRRTIDVIASRLYFYYSLSYEQTGDLAEIRGTLLALHH 190 HSP 2 Score: 21.9422 bits (45), Expect = 2.500e-46 Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 3
Query: 54 EVR*IARAVRLT 89
EVR IARAVRLT
Sbjct: 43 EVRRIARAVRLT 54
BLAST of Ca_04828 vs. SwissProt
Match: PSMD3_TOBAC (Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Nicotiana tabacum GN=21D7 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.043e-44 Identity = 91/134 (67.91%), Postives = 113/134 (84.33%), Query Frame = 1
Query: 91 ALRKKLTASVISSFLDHVLTPGTEPHNKLSAYLPKEEDHEMEVDAATSAIQTHVAKHLLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHELTGDLAEICGSYVLIY 492
ALRKKL AS +S+FL++VL PG+E H++LS++LPKE++ +MEVD ATS Q + K+ LPELEIYC+LLVL+FLIDQKKYNEAKACSSAS+A LK VNRRTVDV+ASRL FYYS +ELTGDLAEI G + ++
Sbjct: 57 ALRKKLKASSLSAFLNYVLVPGSEVHSRLSSFLPKEDEQDMEVDTATSGAQAPI-KNPLPELEIYCYLLVLIFLIDQKKYNEAKACSSASIARLKTVNRRTVDVLASRLYFYYSLCYELTGDLAEIRGYLLALH 189
BLAST of Ca_04828 vs. SwissProt
Match: PSD3B_ARATH (26S proteasome non-ATPase regulatory subunit 3 homolog B OS=Arabidopsis thaliana GN=RPN3B PE=1 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 2.646e-42 Identity = 86/134 (64.18%), Postives = 108/134 (80.60%), Query Frame = 1
Query: 94 LRKKLTASVISSFLDHVLTPGTEPHNKLSAYLPKEEDHEMEVDAATSAIQTHVAKHLLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHELTGDLAEICGSYVLIYN 495
LR+KLT SVISSFLD L PG+E H +LS+++PK ++H+MEVD A+S Q KHL ELEIYC+ +VLLFLIDQKKYNEAK CS+AS+A LK+VNRRTVDVIAS+L FYYS S+ELT DLAEI + + +++
Sbjct: 57 LRRKLTGSVISSFLDFALVPGSEAHTRLSSFVPKSDEHDMEVDTASSNSQAP-PKHLPAELEIYCYFIVLLFLIDQKKYNEAKVCSTASIARLKSVNRRTVDVIASKLYFYYSLSYELTNDLAEIRSTLLALHH 189 HSP 2 Score: 21.9422 bits (45), Expect = 2.646e-42 Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 3
Query: 54 EVR*IARAVRLT 89
EVR IARAVRLT
Sbjct: 43 EVRRIARAVRLT 54
BLAST of Ca_04828 vs. SwissProt
Match: PSMD3_DICDI (26S proteasome non-ATPase regulatory subunit 3 OS=Dictyostelium discoideum GN=psmD3 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 7.789e-16 Identity = 50/138 (36.23%), Postives = 83/138 (60.14%), Query Frame = 1
Query: 73 VLFVLQALRKKLTASVISSFLDHVLTPGTEPHNK--LSAYLPKEEDHEMEVDAATSAIQ----THVAKHLLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHELTGDLAEI 468
VL Q++RKKL V++ ++ + K L ++L K + M++D+ T A + + + HL E+E Y HLLVL++LIDQKKY +A CSSA + +++ R T+ ++S++ FYYS S+E+T +L E+
Sbjct: 59 VLRQTQSIRKKLNYKVLNQIVNFAFSHQNHATKKNFLLSFL-KSDGSSMDIDSTTQAEKETTPSSSSSHLNIEVESYIHLLVLIYLIDQKKYEDATKCSSALMETVQSNTRITLYPLSSKIFFYYSLSYEMTNNLHEV 195
BLAST of Ca_04828 vs. SwissProt
Match: PSMD3_ANOGA (Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Anopheles gambiae GN=Dox-A2 PE=3 SV=2) HSP 1 Score: 60.8474 bits (146), Expect = 4.139e-9 Identity = 47/139 (33.81%), Postives = 73/139 (52.52%), Query Frame = 1
Query: 67 LLVLFVLQALRKKLTASVISSFLDHVLTPGTEPHNKLSAYLPKEEDH-----EMEVDAATSAIQTHVAKHLLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHELTGDLAEI 468
L VL L R+KL V+ S + G E + + AY+ ED+ E E+ +AI++ V PE++ Y HLL+L+ L+D+ +A CS +A + NRR++D+IA++ FY+S EL DL I
Sbjct: 61 LRVLRSLPTTRRKLALVVVRSLAVQLYPAGPE-RDGIMAYI---EDYPAGAQEPELPRPRAAIKSPV-----PEVDAYFHLLLLVRLLDKNDLPKATKCSQDLMAKVVGQNRRSLDLIAAKSYFYHSRVAELNNDLESI 190
BLAST of Ca_04828 vs. SwissProt
Match: PSMD3_HUMAN (26S proteasome non-ATPase regulatory subunit 3 OS=Homo sapiens GN=PSMD3 PE=1 SV=2) HSP 1 Score: 55.8398 bits (133), Expect = 1.332e-7 Identity = 36/133 (27.07%), Postives = 67/133 (50.38%), Query Frame = 1
Query: 79 FVLQALR------KKLTASVISSFLDHVLTPGTEPHNKLSAYLPKEEDHEMEVDAATSAIQTHVAKHLLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHELTGDL 459
FVL+ALR ++L V+ + T + L +L + D E ++ + + LLPE+E Y LLV++F+++ K+Y EA+ S + + NRR +D++A++ +Y++ +E L
Sbjct: 93 FVLRALRMLPSTSRRLNHYVLYKAVQGFFTSNNATRDFLLPFLEEPMDTEADLQFRPRTGKA-ASTPLLPEVEAYLQLLVVIFMMNSKRYKEAQKISDDLMQKISTQNRRALDLVAAKCYYYHARVYEFLDKL 224
BLAST of Ca_04828 vs. SwissProt
Match: PSMD3_ANOST (Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Anopheles stephensi GN=DOXA2 PE=3 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 1.332e-7 Identity = 42/135 (31.11%), Postives = 62/135 (45.93%), Query Frame = 1
Query: 67 LLVLFVLQALRKKLTASVISSFLDHVLTPGTEPHNKLSAYLPKEEDHEMEVDAATSAIQTHVAKH-LLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHELTGDLAEI 468
L VL L R+KL V+ S + G E AY+ ED+ K E++ Y HLL+L+ L+D+ +A CS +A + NRR++D+IA++ FY+S EL DL I
Sbjct: 63 LRVLRSLPTTRRKLALVVVGSLAVQLYPAGPERDGNQWAYI---EDYPAGAQEPEGLHDPGSDKSPFAQEVDAYFHLLLLVRLLDKNDLPKATKCSQDLMAKIVGQNRRSLDLIAAKCYFYHSRVSELNNDLESI 194
BLAST of Ca_04828 vs. SwissProt
Match: PSMD3_MOUSE (26S proteasome non-ATPase regulatory subunit 3 OS=Mus musculus GN=Psmd3 PE=1 SV=3) HSP 1 Score: 55.4546 bits (132), Expect = 1.739e-7 Identity = 37/133 (27.82%), Postives = 67/133 (50.38%), Query Frame = 1
Query: 79 FVLQALR------KKLTASVISSFLDHVLTPGTEPHNKLSAYLPKEEDHEMEVDAATSAIQTHVAKHLLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHELTGDL 459
FVL+ALR ++L V+ + T + L +L + D E ++ + A LLPE+E Y LL+++FL++ K+Y EA+ S + + NRR +D++A++ +Y++ +E L
Sbjct: 89 FVLRALRMLPSTSRRLNHYVLYKAVHGFFTSNNATRDFLLPFLEEPMDTEADLQFRPRTGKAASAP-LLPEVEAYLQLLMVIFLMNSKRYKEAQKISDDLMQKISTQNRRALDLVAAKCYYYHARVYEFLDKL 220
BLAST of Ca_04828 vs. SwissProt
Match: PSMD3_BOVIN (26S proteasome non-ATPase regulatory subunit 3 OS=Bos taurus GN=PSMD3 PE=2 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 1.739e-7 Identity = 37/133 (27.82%), Postives = 67/133 (50.38%), Query Frame = 1
Query: 79 FVLQALR------KKLTASVISSFLDHVLTPGTEPHNKLSAYLPKEEDHEMEVDAATSAIQTHVAKHLLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHELTGDL 459
FVL+ALR ++L V+ + T + L +L + D E ++ + A LLPE+E Y LL+++FL++ K+Y EA+ S + + NRR +D++A++ +Y++ +E L
Sbjct: 93 FVLRALRMLPSTSRRLNHYVLYKAVHGFFTSNNATRDFLLPFLEEPMDTEADLQFRPRTGKAASAP-LLPEVEAYLQLLMVIFLMNSKRYKEAQKISDDLMQKISTQNRRALDLVAAKCYYYHARVYEFLDKL 224
BLAST of Ca_04828 vs. TrEMBL
Match: G7J5U6_MEDTR (26S proteasome non-ATPase regulatory subunit OS=Medicago truncatula GN=MTR_3g114480 PE=4 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 3.923e-63 Identity = 120/136 (88.24%), Postives = 128/136 (94.12%), Query Frame = 1
Query: 91 ALRKKLTASVISSFLDHVLTPGTEPHNKLSAYLPKEEDHEMEVDAATSAIQTHV--AKHLLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHELTGDLAEICGSYVLIY 492
ALRKKLTASVISSFLDHVLTPG+EPH KLSAYLPKE+DHEMEVDAATSAIQT + AKHLLPELEIYC+LLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRL FYYSYSHELTGDLAEI G+ + ++
Sbjct: 56 ALRKKLTASVISSFLDHVLTPGSEPHAKLSAYLPKEDDHEMEVDAATSAIQTPIPTAKHLLPELEIYCYLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLFFYYSYSHELTGDLAEIRGNLLALH 191 HSP 2 Score: 31.5722 bits (70), Expect = 3.923e-63 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2
Query: 5 STPSNSVSPLIPSTLQ 52
STPSNSVSP +PSTLQ
Sbjct: 11 STPSNSVSPPVPSTLQ 26 HSP 3 Score: 21.9422 bits (45), Expect = 3.923e-63 Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 3
Query: 54 EVR*IARAVRLT 89
EVR IARAVRLT
Sbjct: 43 EVRRIARAVRLT 54
BLAST of Ca_04828 vs. TrEMBL
Match: I1K7H0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 1.020e-56 Identity = 110/134 (82.09%), Postives = 123/134 (91.79%), Query Frame = 1
Query: 91 ALRKKLTASVISSFLDHVLTPGTEPHNKLSAYLPKEEDHEMEVDAATSAIQTHVAKHLLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHELTGDLAEICGSYVLIY 492
ALR+KLTAS ISSFLDHVLTPG+E H KLSAYLPK++DHEMEVDAATSAIQT AKHLLPELEIYC+LLVLLFLIDQKKY+EAKACSSAS+ WLKN+NRRTVDVIASRL FYYSYS+EL GDLAEI G+ + ++
Sbjct: 56 ALRRKLTASAISSFLDHVLTPGSEVHAKLSAYLPKDDDHEMEVDAATSAIQTP-AKHLLPELEIYCYLLVLLFLIDQKKYSEAKACSSASIVWLKNINRRTVDVIASRLYFYYSYSYELMGDLAEIRGNLLALH 188 HSP 2 Score: 26.9498 bits (58), Expect = 1.020e-56 Identity = 13/16 (81.25%), Postives = 13/16 (81.25%), Query Frame = 2
Query: 5 STPSNSVSPLIPSTLQ 52
STPSNSVS PSTLQ
Sbjct: 11 STPSNSVSSPAPSTLQ 26 HSP 3 Score: 21.9422 bits (45), Expect = 1.020e-56 Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 3
Query: 54 EVR*IARAVRLT 89
EVR IARAVRLT
Sbjct: 43 EVRRIARAVRLT 54
BLAST of Ca_04828 vs. TrEMBL
Match: I1JT00_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 1.729e-56 Identity = 112/134 (83.58%), Postives = 122/134 (91.04%), Query Frame = 1
Query: 91 ALRKKLTASVISSFLDHVLTPGTEPHNKLSAYLPKEEDHEMEVDAATSAIQTHVAKHLLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHELTGDLAEICGSYVLIY 492
ALR+KLTAS ISSFLD VLTPG+E H KLSAYLPKE+DHEMEVDAATSAIQT AKHLLPELEIYC+LLVLLFLIDQKKYNEAKACSSAS+ WLKN NRRTVDVIASRL FYYSYS+ELTGDLAEI G+ + ++
Sbjct: 56 ALRRKLTASAISSFLDLVLTPGSEVHAKLSAYLPKEDDHEMEVDAATSAIQTP-AKHLLPELEIYCYLLVLLFLIDQKKYNEAKACSSASIVWLKNTNRRTVDVIASRLYFYYSYSYELTGDLAEIRGNLLALH 188 HSP 2 Score: 26.1794 bits (56), Expect = 1.729e-56 Identity = 13/16 (81.25%), Postives = 13/16 (81.25%), Query Frame = 2
Query: 5 STPSNSVSPLIPSTLQ 52
STPSNSVS PSTLQ
Sbjct: 11 STPSNSVSLPAPSTLQ 26 HSP 3 Score: 21.9422 bits (45), Expect = 1.729e-56 Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 3
Query: 54 EVR*IARAVRLT 89
EVR IARAVRLT
Sbjct: 43 EVRRIARAVRLT 54
BLAST of Ca_04828 vs. TrEMBL
Match: I1MC13_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 2.335e-47 Identity = 98/136 (72.06%), Postives = 117/136 (86.03%), Query Frame = 1
Query: 91 ALRKKLTASVISSFLDHVLTPGTEPHNKLSAYLP--KEEDHEMEVDAATSAIQTHVAKHLLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHELTGDLAEICGSYVLIY 492
A R+KLT V+SSFLD+VLTP +EPH +LS+YLP KE D EMEVD+ATS IQT AKHLLPELEIYC+LLVLLFLIDQK+Y+ AKACSSAS+ LK++NRRTVDVIASRL FYYSYS+ELTG+LAEI G+ + ++
Sbjct: 56 AFRRKLTTPVLSSFLDYVLTPASEPHTRLSSYLPNPKEGDREMEVDSATSTIQTLAAKHLLPELEIYCYLLVLLFLIDQKRYDAAKACSSASIVRLKSLNRRTVDVIASRLYFYYSYSYELTGNLAEIRGNLLALH 191
BLAST of Ca_04828 vs. TrEMBL
Match: K7MP32_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 2.581e-46 Identity = 96/136 (70.59%), Postives = 118/136 (86.76%), Query Frame = 1
Query: 91 ALRKKLTASVISSFLDHVLTPGTEPHNKLSAYLP--KEEDHEMEVDAATSAIQTHVAKHLLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHELTGDLAEICGSYVLIY 492
ALR+KLTA V+SSFLD+VL P +EPH +LS++LP KE D EMEVD++TS IQT AKHLLPELEIYC+LLVLLFLIDQK+Y+ AKACSSAS+ LK++NRRTV+VIASRL FYYSYS+ELTG+LAEI G+ + ++
Sbjct: 56 ALRRKLTAPVLSSFLDYVLPPASEPHTRLSSFLPNPKEGDREMEVDSSTSTIQTPAAKHLLPELEIYCYLLVLLFLIDQKRYDTAKACSSASIVRLKSLNRRTVNVIASRLYFYYSYSYELTGNLAEIRGNLLALH 191
BLAST of Ca_04828 vs. TrEMBL
Match: B9S5K6_RICCO (26S proteasome regulatory subunit S3, putative OS=Ricinus communis GN=RCOM_0977830 PE=4 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 6.358e-45 Identity = 90/134 (67.16%), Postives = 116/134 (86.57%), Query Frame = 1
Query: 91 ALRKKLTASVISSFLDHVLTPGTEPHNKLSAYLPKEEDHEMEVDAATSAIQTHVAKHLLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHELTGDLAEICGSYVLIY 492
ALR+KL A ++S+FL+ +LTPG++P+ +LS++LPKE+DHEMEVD ATS Q AKH LPELE+YC+LLVL++LIDQKKYNEAKACS+A +A LKN+NRRTVDV+ASRL FYYS S+ELTGDLAEI G+ + ++
Sbjct: 60 ALRRKLKAQLLSAFLNSILTPGSDPYTRLSSFLPKEDDHEMEVDTATSVTQAP-AKHPLPELEMYCYLLVLIYLIDQKKYNEAKACSTACIARLKNLNRRTVDVLASRLYFYYSLSYELTGDLAEIRGNLLALH 192
BLAST of Ca_04828 vs. TrEMBL
Match: M5XDM6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004821mg PE=4 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 1.096e-44 Identity = 94/136 (69.12%), Postives = 116/136 (85.29%), Query Frame = 1
Query: 94 LRKKLTASVISSFLDHVLTPGTEPHNKLSAYLPKEEDHEMEVD---AATSAIQTHVAKHLLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHELTGDLAEICGSYVLIY 492
LR+KLTA ++S+FLD+ L PG+E H +LSAYLPK++ H MEVD AATSA+Q AKH+LPELEIYC+LLV+LFLIDQK+Y+EAKACSSAS+A LKN NRRTVDV+ASRL FYYSYS+ELTG LAEI G+ + ++
Sbjct: 58 LRRKLTAPLLSAFLDYALLPGSEAHARLSAYLPKDDRHGMEVDNDDAATSAVQAP-AKHILPELEIYCYLLVILFLIDQKRYDEAKACSSASIARLKNFNRRTVDVLASRLYFYYSYSYELTGSLAEIRGNLLALH 192 HSP 2 Score: 21.9422 bits (45), Expect = 1.096e-44 Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 3
Query: 54 EVR*IARAVRLT 89
EVR IARAVRLT
Sbjct: 44 EVRRIARAVRLT 55
BLAST of Ca_04828 vs. TrEMBL
Match: Q93ZI2_ARATH (At1g20200/T20H2_4 OS=Arabidopsis thaliana PE=1 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 1.099e-44 Identity = 90/134 (67.16%), Postives = 113/134 (84.33%), Query Frame = 1
Query: 94 LRKKLTASVISSFLDHVLTPGTEPHNKLSAYLPKEEDHEMEVDAATSAIQTHVAKHLLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHELTGDLAEICGSYVLIYN 495
LR+KLT SV+SSFLD L PG+E H++LS+++PK ++H+MEVD A+SA Q +KHL ELEIYC+ +VLLFLIDQKKYNEAKACSSAS+A LKNVNRRT+DVIASRL FYYS S+E TGDLAEI G+ + +++
Sbjct: 57 LRQKLTGSVLSSFLDFALVPGSEAHSRLSSFVPKGDEHDMEVDTASSATQAAPSKHLPAELEIYCYFIVLLFLIDQKKYNEAKACSSASIARLKNVNRRTIDVIASRLYFYYSLSYEQTGDLAEIRGTLLALHH 190 HSP 2 Score: 21.9422 bits (45), Expect = 1.099e-44 Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 3
Query: 54 EVR*IARAVRLT 89
EVR IARAVRLT
Sbjct: 43 EVRRIARAVRLT 54
BLAST of Ca_04828 vs. TrEMBL
Match: F6I0Z2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g02590 PE=4 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 1.346e-44 Identity = 90/133 (67.67%), Postives = 113/133 (84.96%), Query Frame = 1
Query: 94 LRKKLTASVISSFLDHVLTPGTEPHNKLSAYLPKEEDHEMEVDAATSAIQTHVAKHLLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHELTGDLAEICGSYVLIY 492
LR+KL A+V+S FL++ L PG+E H +LS+YLPKE++H+MEVD ATSA QT AKH LPELEIYC+LLVL+FLIDQKKY EAKACS+AS+ LKN+NRRT+DV+ASRL YYS S+ELTGDLAEI G+ + ++
Sbjct: 57 LRRKLKATVLSGFLNYALNPGSEVHTRLSSYLPKEDEHDMEVDTATSATQTP-AKHPLPELEIYCYLLVLIFLIDQKKYKEAKACSAASITRLKNLNRRTIDVLASRLYSYYSLSYELTGDLAEIRGNLLALH 188 HSP 2 Score: 23.0978 bits (48), Expect = 1.346e-44 Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2
Query: 11 PSNSVSPLIPSTLQ 52
PSNSV+ PSTLQ
Sbjct: 13 PSNSVTSTTPSTLQ 26 HSP 3 Score: 21.1718 bits (43), Expect = 1.346e-44 Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 3
Query: 54 EVR*IARAVRLTSI 95
EVR I RA+RLT I
Sbjct: 43 EVRRIVRAIRLTMI 56
BLAST of Ca_04828 vs. TrEMBL
Match: D7KIA4_ARALL (EMB2719 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_472250 PE=4 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.861e-44 Identity = 89/134 (66.42%), Postives = 113/134 (84.33%), Query Frame = 1
Query: 94 LRKKLTASVISSFLDHVLTPGTEPHNKLSAYLPKEEDHEMEVDAATSAIQTHVAKHLLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHELTGDLAEICGSYVLIYN 495
LR+KLT SV+SSFLD L PG+E H++LS+++PK ++H+MEVD A+SA Q +KHL ELEIYC+ +VLLFLIDQ+KYNEAKACSSAS+A LKNVNRRT+DVIASRL FYYS S+E TGDLAEI G+ + +++
Sbjct: 57 LRRKLTGSVLSSFLDFALVPGSEAHSRLSSFVPKGDEHDMEVDTASSATQAAPSKHLPAELEIYCYFIVLLFLIDQRKYNEAKACSSASIARLKNVNRRTIDVIASRLYFYYSLSYEQTGDLAEIRGTLLALHH 190 HSP 2 Score: 21.9422 bits (45), Expect = 1.861e-44 Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 3
Query: 54 EVR*IARAVRLT 89
EVR IARAVRLT
Sbjct: 43 EVRRIARAVRLT 54
BLAST of Ca_04828 vs. DB:Swiss
Match: PSD3A_ARATH (26S proteasome non-ATPase regulatory subunit 3 homolog A OS=Arabidopsis thaliana OX=3702 GN=RPN3A PE=1 SV=3) HSP 1 Score: 191.43 bits (485), Expect = 4.938e-58 Identity = 94/154 (61.04%), Postives = 119/154 (77.27%), Query Frame = 1
Query: 31 TYSIYFTAKFVELLVLFVLQALRKKLTASVISSFLDHVLTPGTEPHNKLSAYLPKEEDHEMEVDAATSAIQTHVAKHLLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHELTGDLAEICGSYVLIY 492
T + A+ V L + LR+KLT SV+SSFLD L PG+E H++LS+++PK ++H+MEVD A+SA Q +KHL ELEIYC+ +VLLFLIDQKKYNEAKACSSAS+A LKNVNRRT+DVIASRL FYYS S+E TGDLAEI G+ + ++
Sbjct: 41 TKEVRRIARAVRLTI-----GLRQKLTGSVLSSFLDFALVPGSEAHSRLSSFVPKGDEHDMEVDTASSATQAAPSKHLPAELEIYCYFIVLLFLIDQKKYNEAKACSSASIARLKNVNRRTIDVIASRLYFYYSLSYEQTGDLAEIRGTLLALH 189
BLAST of Ca_04828 vs. DB:Swiss
Match: PSMD3_DAUCA (Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Daucus carota OX=4039 GN=21D7 PE=1 SV=2) HSP 1 Score: 186.808 bits (473), Expect = 2.994e-56 Identity = 91/134 (67.91%), Postives = 116/134 (86.57%), Query Frame = 1
Query: 91 ALRKKLTASVISSFLDHVLTPGTEPHNKLSAYLPKEEDHEMEVDAATSAIQTHVAKHLLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHELTGDLAEICGSYVLIY 492
ALRKKL ASV+++FL+ L PG+E H +L++YLPKE++H+MEVD A SA T +AKH LPELEIYC+LLVL+FLIDQKKY+EAKACSSAS+A +KN+NRRTV+V+ASRL FYYS S+ELTGDLAEI G+ + ++
Sbjct: 58 ALRKKLNASVVNAFLNFSLVPGSEVHARLASYLPKEDEHDMEVDTAMSATTT-LAKHSLPELEIYCYLLVLIFLIDQKKYSEAKACSSASIARVKNLNRRTVEVLASRLYFYYSLSYELTGDLAEIRGNLLALH 190
BLAST of Ca_04828 vs. DB:Swiss
Match: PSMD3_TOBAC (Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Nicotiana tabacum OX=4097 GN=21D7 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 7.637e-56 Identity = 91/128 (71.09%), Postives = 110/128 (85.94%), Query Frame = 1
Query: 91 ALRKKLTASVISSFLDHVLTPGTEPHNKLSAYLPKEEDHEMEVDAATSAIQTHVAKHLLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHELTGDLAEICG 474
ALRKKL AS +S+FL++VL PG+E H++LS++LPKE++ +MEVD ATS Q + K+ LPELEIYC+LLVL+FLIDQKKYNEAKACSSAS+A LK VNRRTVDV+ASRL FYYS +ELTGDLAEI G
Sbjct: 57 ALRKKLKASSLSAFLNYVLVPGSEVHSRLSSFLPKEDEQDMEVDTATSGAQAPI-KNPLPELEIYCYLLVLIFLIDQKKYNEAKACSSASIARLKTVNRRTVDVLASRLYFYYSLCYELTGDLAEIRG 183
BLAST of Ca_04828 vs. DB:Swiss
Match: PSD3B_ARATH (26S proteasome non-ATPase regulatory subunit 3 homolog B OS=Arabidopsis thaliana OX=3702 GN=RPN3B PE=1 SV=2) HSP 1 Score: 176.407 bits (446), Expect = 3.158e-52 Identity = 91/146 (62.33%), Postives = 110/146 (75.34%), Query Frame = 1
Query: 31 TYSIYFTAKFVELLVLFVLQALRKKLTASVISSFLDHVLTPGTEPHNKLSAYLPKEEDHEMEVDAATSAIQTHVAKHLLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHELTGDLAEI 468
T + A+ V L V LR+KLT SVISSFLD L PG+E H +LS+++PK ++H+MEVD A+S Q KHL ELEIYC+ +VLLFLIDQKKYNEAK CS+AS+A LK+VNRRTVDVIAS+L FYYS S+ELT DLAEI
Sbjct: 41 TKEVRRIARAVRLTV-----GLRRKLTGSVISSFLDFALVPGSEAHTRLSSFVPKSDEHDMEVDTASSNSQA-PPKHLPAELEIYCYFIVLLFLIDQKKYNEAKVCSTASIARLKSVNRRTVDVIASKLYFYYSLSYELTNDLAEI 180
BLAST of Ca_04828 vs. DB:Swiss
Match: PSMD3_DICDI (26S proteasome non-ATPase regulatory subunit 3 OS=Dictyostelium discoideum OX=44689 GN=psmD3 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.555e-16 Identity = 50/138 (36.23%), Postives = 83/138 (60.14%), Query Frame = 1
Query: 73 VLFVLQALRKKLTASVISSFLDHVLTPGTEPHNK--LSAYLPKEEDHEMEVDAATSAIQ----THVAKHLLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHELTGDLAEI 468
VL Q++RKKL V++ ++ + K L ++L K + M++D+ T A + + + HL E+E Y HLLVL++LIDQKKY +A CSSA + +++ R T+ ++S++ FYYS S+E+T +L E+
Sbjct: 59 VLRQTQSIRKKLNYKVLNQIVNFAFSHQNHATKKNFLLSFL-KSDGSSMDIDSTTQAEKETTPSSSSSHLNIEVESYIHLLVLIYLIDQKKYEDATKCSSALMETVQSNTRITLYPLSSKIFFYYSLSYEMTNNLHEV 195
BLAST of Ca_04828 vs. DB:Swiss
Match: PSMD3_ANOGA (Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Anopheles gambiae OX=7165 GN=Dox-A2 PE=3 SV=2) HSP 1 Score: 53.5286 bits (127), Expect = 1.181e-7 Identity = 47/139 (33.81%), Postives = 73/139 (52.52%), Query Frame = 1
Query: 67 LLVLFVLQALRKKLTASVISSFLDHVLTPGTEPHNKLSAYLPKEEDH-----EMEVDAATSAIQTHVAKHLLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHELTGDLAEI 468
L VL L R+KL V+ S + G E + + AY+ ED+ E E+ +AI++ V PE++ Y HLL+L+ L+D+ +A CS +A + NRR++D+IA++ FY+S EL DL I
Sbjct: 61 LRVLRSLPTTRRKLALVVVRSLAVQLYPAGPE-RDGIMAYI---EDYPAGAQEPELPRPRAAIKSPV-----PEVDAYFHLLLLVRLLDKNDLPKATKCSQDLMAKVVGQNRRSLDLIAAKSYFYHSRVAELNNDLESI 190
BLAST of Ca_04828 vs. DB:Swiss
Match: PSMD3_HUMAN (26S proteasome non-ATPase regulatory subunit 3 OS=Homo sapiens OX=9606 GN=PSMD3 PE=1 SV=2) HSP 1 Score: 53.1434 bits (126), Expect = 1.972e-7 Identity = 38/129 (29.46%), Postives = 65/129 (50.39%), Query Frame = 1
Query: 79 FVLQALR------KKLTASVISSFLDHVLTPGTEPHNKLSAYLPKEEDHEMEVDAATSAIQTHVAK-HLLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHE 444
FVL+ALR ++L V+ + T + L +L EE + E D A LLPE+E Y LLV++F+++ K+Y EA+ S + + NRR +D++A++ +Y++ +E
Sbjct: 93 FVLRALRMLPSTSRRLNHYVLYKAVQGFFTSNNATRDFLLPFL--EEPMDTEADLQFRPRTGKAASTPLLPEVEAYLQLLVVIFMMNSKRYKEAQKISDDLMQKISTQNRRALDLVAAKCYYYHARVYE 219
BLAST of Ca_04828 vs. DB:Swiss
Match: PSMD3_MOUSE (26S proteasome non-ATPase regulatory subunit 3 OS=Mus musculus OX=10090 GN=Psmd3 PE=1 SV=3) HSP 1 Score: 52.373 bits (124), Expect = 3.692e-7 Identity = 22/61 (36.07%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 262 LLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHE 444
LLPE+E Y LL+++FL++ K+Y EA+ S + + NRR +D++A++ +Y++ +E
Sbjct: 155 LLPEVEAYLQLLMVIFLMNSKRYKEAQKISDDLMQKISTQNRRALDLVAAKCYYYHARVYE 215
BLAST of Ca_04828 vs. DB:Swiss
Match: PSMD3_BOVIN (26S proteasome non-ATPase regulatory subunit 3 OS=Bos taurus OX=9913 GN=PSMD3 PE=2 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 3.769e-7 Identity = 22/61 (36.07%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 262 LLPELEIYCHLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLVFYYSYSHE 444
LLPE+E Y LL+++FL++ K+Y EA+ S + + NRR +D++A++ +Y++ +E
Sbjct: 159 LLPEVEAYLQLLMVIFLMNSKRYKEAQKISDDLMQKISTQNRRALDLVAAKCYYYHARVYE 219 The following BLAST results are available for this feature:
BLAST of Ca_04828 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot) Total hits: 10
BLAST of Ca_04828 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_04828 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 9
Expression
Available Analyses Select an Expression Analysis Select a property to group and sort biological samples Select a property to color biological samples Hover the mouse over a column in the graph to view more information about that biological sample. You can click and drag to rearrange groups along the x-axis. You can also click and drag to move the legend. InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_04828_v1.0_kabuli ID=Ca_04828_v1.0_kabuli; Name=Ca_04828; organism=Cicer arietinum; type=mRNA; length=501bpback to top protein sequence of Ca_04828_v1.0_kabuli >Ca_04828_v1.0_kabuli ID=Ca_04828_v1.0_kabuli; Name=Ca_04828_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=166bpback to top mRNA from alignment at Ca5:31224345..31225730+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_04828_v1.0_kabuli ID=Ca_04828_v1.0_kabuli; Name=Ca_04828; organism=Cicer arietinum; type=mRNA; length=1386bp; location=Sequence derived from: Ca5:31224345..31225730+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca5:31224345..31225730+ >Ca_04828_v1.0_kabuli ID=Ca_04828_v1.0_kabuli; Name=Ca_04828; organism=Cicer arietinum; type=CDS; length=501bp; location=Sequence derived from: Ca5:31224345..31225730+ (Cicer arietinumback to top |